Sat Apr 13 11:38:34 UTC 2024 I: starting to build openms/trixie/i386 on jenkins on '2024-04-13 11:38' Sat Apr 13 11:38:34 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_6/20019/console.log Sat Apr 13 11:38:34 UTC 2024 I: Downloading source for trixie/openms=2.6.0+cleaned1-4 --2024-04-13 11:38:34-- http://deb.debian.org/debian/pool/main/o/openms/openms_2.6.0%2bcleaned1-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2953 (2.9K) [text/prs.lines.tag] Saving to: ‘openms_2.6.0+cleaned1-4.dsc’ 0K .. 100% 439M=0s 2024-04-13 11:38:34 (439 MB/s) - ‘openms_2.6.0+cleaned1-4.dsc’ saved [2953/2953] Sat Apr 13 11:38:34 UTC 2024 I: openms_2.6.0+cleaned1-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: openms Binary: libopenms2.6.0, libopenms-dev, topp, openms-common, openms-doc, openms Architecture: any all Version: 2.6.0+cleaned1-4 Maintainer: The Debichem Group Uploaders: Filippo Rusconi Homepage: http://www.openms.de Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/debichem-team/openms Vcs-Git: https://salsa.debian.org/debichem-team/openms.git Build-Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev, libboost-iostreams-dev, libboost-date-time-dev, libboost-math-dev, libsqlite3-dev, libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended Package-List: libopenms-dev deb libdevel optional arch=any libopenms2.6.0 deb libs optional arch=any openms deb science optional arch=all openms-common deb science optional arch=all openms-doc deb doc optional arch=all topp deb science optional arch=any Checksums-Sha1: 6f20d0dc6ad8322e54c41767eb456c580709c7e9 213326346 openms_2.6.0+cleaned1.orig.tar.gz a1e236b77b72ca63b8840c8435cdcf2e3692ec45 772668 openms_2.6.0+cleaned1-4.debian.tar.xz Checksums-Sha256: c58c12b00c14d22d548839c0d074a76e4884308e2cb23add3bfc1a04cebbf0af 213326346 openms_2.6.0+cleaned1.orig.tar.gz 12161cb5d31ada9156a92e9fba1d8c66f1aa79fc3bff4870025acbba16506fff 772668 openms_2.6.0+cleaned1-4.debian.tar.xz Files: 28b658ae4359a0b7227e713cd14eabd5 213326346 openms_2.6.0+cleaned1.orig.tar.gz 27d80d86e099183c54cdcbc3d43bbcca 772668 openms_2.6.0+cleaned1-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEu71F6oGKuG/2fnKF0+Fzg8+n/wYFAmWG7YsACgkQ0+Fzg8+n /wa5PhAAnCahPUia7Y1aqIPUhIL2aGl3QAD99vTHlL0SFPZzDHm+y44uqD2vu0ld zGzS7djO7yaJeemkKnJwRpmxYtWgnLBs1JJkTF7Xm8kuLR8XYn57uDhdXDhbqjOq AaCZgD+kIRleCFl2QEgi5M0qZBITphmpxABcWik8UEOnGdRAkFCAoV5jumb8toM+ KGDdzZ5veLz/J6I1je8g+ORylqbiQ+JOFDFmXmWJtSF1CqSuI2axnaCmD7vZwKv8 Z6fPSBHeEtnMgjUX8Q+/TLbBsK9s9tpphvST61ZaxdVTz3wY1/gVKrKtl+6pXXtP vhhnB3zbePuLhBTriELZ9D9qicFrdA5GstqdKXKOo791SXtw3n4snmcyeM/W7Khv 0VZHXWBxQL+CzL2BZ5uW/PWDtbS4cm2MgKRdAI9/c83QMIgcj9d6bZXNl9GUh2Cn V/maISxqB9tnCRKym6EOCiBYUjTSQGmilF2+ut7N6BVzB3Jka2nLaEy+R33wA/Q6 m125v4BqTGTKQPcxS6QGwsO3QbGr4HIm5mMnvyqNo3vZ5jzFnF6TIeGG2PeXb1JG aK1qDnsckkxFQTSxn58i7z0Cd9Bw+5R5j17WzHnxUa8XhLW2lTSGwiubonGizwEV gqp1lJiyZXK/SfRwF8X47IyFqsMrC+OnmeEXNBDGhJtvjroBE2E= =SFn8 -----END PGP SIGNATURE----- Sat Apr 13 11:38:34 UTC 2024 I: Checking whether the package is not for us Sat Apr 13 11:38:34 UTC 2024 I: Starting 1st build on remote node ionos6-i386.debian.net. Sat Apr 13 11:38:34 UTC 2024 I: Preparing to do remote build '1' on ionos6-i386.debian.net. Sat Apr 13 14:21:22 UTC 2024 I: Deleting $TMPDIR on ionos6-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri May 16 06:01:45 -12 2025 I: pbuilder-time-stamp: 1747418505 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [openms_2.6.0+cleaned1-4.dsc] I: copying [./openms_2.6.0+cleaned1.orig.tar.gz] I: copying [./openms_2.6.0+cleaned1-4.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Dec 23 14:24:11 2023 gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./openms_2.6.0+cleaned1-4.dsc: no acceptable signature found dpkg-source: info: extracting openms in openms-2.6.0+cleaned1 dpkg-source: info: unpacking openms_2.6.0+cleaned1.orig.tar.gz dpkg-source: info: unpacking openms_2.6.0+cleaned1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying sonameAndNameLinkSkipCmakeBuildSystem.patch dpkg-source: info: applying installDirsSettingsCmakeBuildSystem.patch dpkg-source: info: applying fix-glpk-version-check.patch dpkg-source: info: applying add_missing_boost_header.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/34780/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='c9f0fe8b28c24fe58f4993dfa93cb15b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='34780' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.mzQjfkqs/pbuilderrc_ja3p --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.mzQjfkqs/b1 --logfile b1/build.log openms_2.6.0+cleaned1-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos6-i386 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 14 17:47 /bin -> usr/bin I: user script /srv/workspace/pbuilder/34780/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev, libboost-iostreams-dev, libboost-date-time-dev, libboost-math-dev, libsqlite3-dev, libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19874 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec (>= 0.3); however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on cmake (>= 3.1.2); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libxerces-c-dev (>= 3.2.2); however: Package libxerces-c-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libwildmagic-dev (>= 5.17); however: Package libwildmagic-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-date-time-dev; however: Package libboost-date-time-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-math-dev; however: Package libboost-math-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libsvm-dev (>= 3.21); however: Package libsvm-dev is not installed. pbuilder-satisfydepends-dummy depends on libglpk-dev (>= 4.65); however: Package libglpk-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev (>= 1.2.7); however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev (>= 1.0.6); however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on cppcheck (>= 1.54); however: Package cppcheck is not installed. pbuilder-satisfydepends-dummy depends on qtbase5-dev (>= 5.11.3); however: Package qtbase5-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5opengl5-dev (>= 5.11.3); however: Package libqt5opengl5-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5svg5-dev (>= 5.11.3); however: Package libqt5svg5-dev is not installed. pbuilder-satisfydepends-dummy depends on coinor-libcbc-dev (>= 2.9.9); however: Package coinor-libcbc-dev is not installed. pbuilder-satisfydepends-dummy depends on coinor-libcgl-dev (>= 0.59.10); however: Package coinor-libcgl-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on imagemagick; however: Package imagemagick is not installed. pbuilder-satisfydepends-dummy depends on doxygen (>= 1.8.13); however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on texlive-extra-utils; however: Package texlive-extra-utils is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-extra; however: Package texlive-fonts-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-font-utils; however: Package texlive-font-utils is not installed. pbuilder-satisfydepends-dummy depends on texlive-plain-generic; however: Package texlive-plain-generic is not installed. pbuilder-satisfydepends-dummy depends on tex-gyre; however: Package tex-gyre is not installed. pbuilder-satisfydepends-dummy depends on ghostscript; however: Package ghostscript is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} coinor-libcbc-dev{a} coinor-libcbc3.1{a} coinor-libcgl-dev{a} coinor-libcgl1{a} coinor-libclp-dev{a} coinor-libclp1{a} coinor-libcoinutils-dev{a} coinor-libcoinutils3v5{a} coinor-libosi-dev{a} coinor-libosi1v5{a} cppcheck{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} graphviz{a} groff-base{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} imagemagick{a} imagemagick-6-common{a} imagemagick-6.q16{a} intltool-debian{a} libabsl20220623{a} libaec-dev{a} libaec0{a} libamd3{a} libaom3{a} libapache-pom-java{a} libarchive-zip-perl{a} libarchive13{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif16{a} libblas-dev{a} libblas3{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libbsd0{a} libbtf2{a} libbz2-dev{a} libcairo2{a} libcamd3{a} libccolamd3{a} libcdt5{a} libcgraph6{a} libcholmod5{a} libclang-cpp16{a} libclang1-16{a} libcolamd3{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2{a} libcurl3-gnutls{a} libcurl4{a} libcurl4-openssl-dev{a} libcxsparse4{a} libdatrie1{a} libdav1d7{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1{a} libevdev2{a} libexpat1{a} libfftw3-double3{a} libfile-homedir-perl{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfmt9{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgbm1{a} libgd3{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0{a} libglpk-dev{a} libglpk40{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgts-0.7-5{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} 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libpython3.11-minimal{a} libpython3.11-stdlib{a} libqt5concurrent5{a} libqt5core5a{a} libqt5dbus5{a} libqt5gui5{a} libqt5network5{a} libqt5opengl5{a} libqt5opengl5-dev{a} libqt5printsupport5{a} libqt5sql5{a} libqt5svg5{a} libqt5svg5-dev{a} libqt5test5{a} libqt5widgets5{a} libqt5xml5{a} librav1e0{a} libraw23{a} librbio4{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsombok3{a} libspex2{a} libspqr4{a} libsqlite3-dev{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsvm-dev{a} libsvm3{a} libsynctex2{a} libsz2{a} libteckit0{a} libtexlua53-5{a} libthai-data{a} libthai0{a} libtiff6{a} libtinyxml2-10{a} libtool{a} libuchardet0{a} libumfpack6{a} libunicode-linebreak-perl{a} libuv1{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libwildmagic-common{a} libwildmagic-dev{a} libwildmagic5{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxerces-c-dev{a} libxerces-c3.2{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence1{a} libxt6{a} libxxf86vm1{a} libyaml-tiny-perl{a} libyuv0{a} libz3-4{a} libzzip-0-13{a} lmodern{a} m4{a} man-db{a} media-types{a} netbase{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} poppler-data{a} preview-latex-style{a} procps{a} python3{a} python3-minimal{a} python3-pkg-resources{a} python3-pygments{a} python3.11{a} python3.11-minimal{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} shared-mime-info{a} t1utils{a} tex-common{a} tex-gyre{a} texlive-base{a} texlive-binaries{a} texlive-extra-utils{a} texlive-font-utils{a} texlive-fonts-extra{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-luatex{a} texlive-pictures{a} texlive-plain-generic{a} tzdata{a} ucf{a} x11-common{a} x11proto-dev{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates cm-super curl dbus default-jre dvisvgm fonts-adf-accanthis fonts-adf-berenis fonts-adf-gillius fonts-adf-universalis fonts-cabin fonts-cantarell fonts-clear-sans fonts-comfortaa fonts-comic-neue fonts-croscore fonts-crosextra-caladea fonts-crosextra-carlito fonts-dejavu-extra fonts-droid-fallback fonts-ebgaramond-extra fonts-font-awesome fonts-freefont-otf fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-go fonts-inter fonts-lato fonts-liberation2 fonts-linuxlibertine fonts-lobstertwo fonts-noto-color-emoji fonts-noto-core fonts-noto-mono fonts-oflb-asana-math fonts-open-sans fonts-paratype fonts-roboto-slab fonts-roboto-unhinted fonts-sil-andika fonts-sil-charis fonts-sil-gentium fonts-sil-gentium-basic fonts-sil-gentiumplus fonts-sil-gentiumplus-compact fonts-stix fonts-texgyre fonts-texgyre-math javascript-common libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgraphblas-dev libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libldap-common liblog-log4perl-perl libltdl-dev libmagickcore-6.q16-7-extra libmail-sendmail-perl libnet-dbus-perl libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libsasl2-modules libspreadsheet-parseexcel-perl libx11-protocol-perl lynx mesa-vulkan-drivers netpbm ps2eps psmisc publicsuffix qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 ruby texlive-fonts-extra-links tipa tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 383 newly installed, 0 to remove and 0 not upgraded. Need to get 1142 MB of archives. After unpacking 3678 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libfftw3-double3 i386 3.3.10-1+b1 [635 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.5.0-2+b2 [104 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 libpng16-16 i386 1.6.43-1 [285 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 libfreetype6 i386 2.13.2+dfsg-1+b1 [449 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libfontenc1 i386 1:1.1.8-1 [23.1 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 x11-common all 1:7.7+23 [252 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 xfonts-utils i386 1:7.7+6 [95.2 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 13 http://deb.debian.org/debian trixie/main i386 fontconfig-config i386 2.15.0-1.1 [317 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libfontconfig1 i386 2.15.0-1.1 [401 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libsharpyuv0 i386 1.3.2-0.4 [107 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdav1d7 i386 1.4.1-1 [330 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libheif-plugin-dav1d i386 1.17.6-1 [9936 B] Get: 18 http://deb.debian.org/debian trixie/main i386 libde265-0 i386 1.0.15-1 [195 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libheif-plugin-libde265 i386 1.17.6-1 [13.4 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libheif1 i386 1.17.6-1 [299 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libjbig0 i386 2.1-6.1+b1 [31.8 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo i386 1:2.1.5-2+b2 [169 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 liblcms2-2 i386 2.14-2+b1 [165 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libglib2.0-0 i386 2.78.4-1 [1520 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 liblqr-1-0 i386 0.4.2-2.1 [30.6 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libltdl7 i386 2.4.7-7 [395 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 libopenjp2-7 i386 2.5.0-2+b2 [197 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 libraw23 i386 0.21.2-2 [407 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 liblerc4 i386 4.0.0+ds-4+b1 [180 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libwebp7 i386 1.3.2-0.4 [314 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libtiff6 i386 4.5.1+git230720-4 [338 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libwebpdemux2 i386 1.3.2-0.4 [108 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libwebpmux3 i386 1.3.2-0.4 [121 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 libbsd0 i386 0.12.2-1 [134 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.15-1 [148 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.7-1 [822 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b2 [727 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 imagemagick-6-common all 8:6.9.12.98+dfsg1-5 [66.9 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libmagickcore-6.q16-7 i386 8:6.9.12.98+dfsg1-5+b1 [1757 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libmagickwand-6.q16-7 i386 8:6.9.12.98+dfsg1-5+b1 [298 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 poppler-data all 0.4.12-1 [1601 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 libpython3.11-minimal i386 3.11.8-1 [817 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 python3.11-minimal i386 3.11.8-1 [2087 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.11.6-1 [26.2 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 tzdata all 2024a-1 [255 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-3 [69.1 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 libreadline8 i386 8.2-3+b1 [171 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 libpython3.11-stdlib i386 3.11.8-1 [1821 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 python3.11 i386 3.11.8-1 [597 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.11.6-1 [9224 B] Get: 59 http://deb.debian.org/debian trixie/main i386 python3 i386 3.11.6-1 [26.2 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-4 [65.4 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-4 [876 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-2+b1 [314 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libmagic1 i386 1:5.45-2+b1 [114 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-2+b1 [43.0 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-3 [1195 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.39.3-6 [93.3 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 man-db i386 2.12.0-3 [1413 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 ucf all 3.0043+nmu1 [55.2 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 autoconf all 2.71-3 [332 kB] Get: 75 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 autopoint all 0.21-14 [496 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 libarchive13 i386 3.7.2-1 [386 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-4+b1 [20.7 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-4+b1 [60.7 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5+b3 [196 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.59.0-1 [82.5 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 libpsl5 i386 0.21.2-1+b1 [59.7 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 libssh2-1 i386 1.11.0-4 [224 kB] Get: 86 http://deb.debian.org/debian trixie/main i386 libcurl4 i386 8.5.0-2 [463 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 libjsoncpp25 i386 1.9.5-6+b2 [89.2 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 librhash0 i386 1.4.3-3+b1 [143 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 libuv1 i386 1.48.0-1 [156 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 cmake-data all 3.28.3-1 [2128 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 cmake i386 3.28.3-1 [11.7 MB] Get: 92 http://deb.debian.org/debian trixie/main i386 libblas3 i386 3.12.0-3 [140 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14-20240201-3 [733 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 liblapack3 i386 3.12.0-3 [2167 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 coinor-libcoinutils3v5 i386 2.11.4+repack1-4 [473 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 coinor-libosi1v5 i386 0.108.9+ds-1 [282 kB] Get: 97 http://deb.debian.org/debian trixie/main i386 coinor-libclp1 i386 1.17.9+ds-1 [867 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 coinor-libcgl1 i386 0.60.8+ds-1 [421 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 coinor-libcbc3.1 i386 2.10.11+ds1-2 [737 kB] Get: 100 http://deb.debian.org/debian trixie/main i386 libbz2-dev i386 1.0.8-5.1 [31.4 kB] Get: 101 http://deb.debian.org/debian trixie/main i386 libblas-dev i386 3.12.0-3 [152 kB] Get: 102 http://deb.debian.org/debian trixie/main i386 liblapack-dev i386 3.12.0-3 [4400 kB] Get: 103 http://deb.debian.org/debian trixie/main i386 coinor-libcoinutils-dev i386 2.11.4+repack1-4 [815 kB] Get: 104 http://deb.debian.org/debian trixie/main i386 coinor-libosi-dev i386 0.108.9+ds-1 [353 kB] Get: 105 http://deb.debian.org/debian trixie/main i386 coinor-libclp-dev i386 1.17.9+ds-1 [1062 kB] Get: 106 http://deb.debian.org/debian trixie/main i386 coinor-libcgl-dev i386 0.60.8+ds-1 [535 kB] Get: 107 http://deb.debian.org/debian trixie/main i386 coinor-libcbc-dev i386 2.10.11+ds1-2 [898 kB] Get: 108 http://deb.debian.org/debian trixie/main i386 libtinyxml2-10 i386 10.0.0+dfsg-2+b1 [33.3 kB] Get: 109 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 110 http://deb.debian.org/debian trixie/main i386 python3-pygments all 2.17.2+dfsg-1 [818 kB] Get: 111 http://deb.debian.org/debian trixie/main i386 cppcheck i386 2.13.0-2+b1 [2402 kB] Get: 112 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 113 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 114 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 115 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 116 http://deb.debian.org/debian trixie/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 117 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 118 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 119 http://deb.debian.org/debian trixie/main i386 libelf1 i386 0.190-1+b1 [182 kB] Get: 120 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1 [118 kB] Get: 121 http://deb.debian.org/debian trixie/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 122 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 123 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 124 http://deb.debian.org/debian trixie/main i386 debhelper all 13.15.3 [901 kB] Get: 125 http://deb.debian.org/debian trixie/main i386 dh-exec i386 0.29 [25.9 kB] Get: 126 http://deb.debian.org/debian trixie/main i386 libedit2 i386 3.1-20230828-1 [97.5 kB] Get: 127 http://deb.debian.org/debian trixie/main i386 libz3-4 i386 4.8.12-3.1+b2 [7989 kB] Get: 128 http://deb.debian.org/debian trixie/main i386 libllvm16 i386 1:16.0.6-20 [26.9 MB] Get: 129 http://deb.debian.org/debian trixie/main i386 libclang-cpp16 i386 1:16.0.6-20 [13.6 MB] Get: 130 http://deb.debian.org/debian trixie/main i386 libclang1-16 i386 1:16.0.6-20 [7733 kB] Get: 131 http://deb.debian.org/debian trixie/main i386 libfmt9 i386 9.1.0+ds1-2 [119 kB] Get: 132 http://deb.debian.org/debian trixie/main i386 doxygen i386 1.9.8+ds-2 [5109 kB] Get: 133 http://deb.debian.org/debian trixie/main i386 fontconfig i386 2.15.0-1.1 [462 kB] Get: 134 http://deb.debian.org/debian trixie/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 135 http://deb.debian.org/debian trixie/main i386 libgs-common all 10.02.1~dfsg-3 [147 kB] Get: 136 http://deb.debian.org/debian trixie/main i386 libgs10-common all 10.02.1~dfsg-3 [474 kB] Get: 137 http://deb.debian.org/debian trixie/main i386 libavahi-common-data i386 0.8-13+b1 [111 kB] Get: 138 http://deb.debian.org/debian trixie/main i386 libavahi-common3 i386 0.8-13+b1 [45.3 kB] Get: 139 http://deb.debian.org/debian trixie/main i386 libdbus-1-3 i386 1.14.10-4 [216 kB] Get: 140 http://deb.debian.org/debian trixie/main i386 libavahi-client3 i386 0.8-13+b1 [49.2 kB] Get: 141 http://deb.debian.org/debian trixie/main i386 libcups2 i386 2.4.7-1+b1 [263 kB] Get: 142 http://deb.debian.org/debian trixie/main i386 libidn12 i386 1.42-2 [81.3 kB] Get: 143 http://deb.debian.org/debian trixie/main i386 libijs-0.35 i386 0.35-15.1+b1 [15.7 kB] Get: 144 http://deb.debian.org/debian trixie/main i386 libjbig2dec0 i386 0.20-1+b1 [66.5 kB] Get: 145 http://deb.debian.org/debian trixie/main i386 libpaper1 i386 1.1.29 [12.7 kB] Get: 146 http://deb.debian.org/debian trixie/main i386 libice6 i386 2:1.0.10-1 [60.8 kB] Get: 147 http://deb.debian.org/debian trixie/main i386 libsm6 i386 2:1.2.3-1 [35.7 kB] Get: 148 http://deb.debian.org/debian trixie/main i386 libxt6 i386 1:1.2.1-1.1 [192 kB] Get: 149 http://deb.debian.org/debian trixie/main i386 libgs10 i386 10.02.1~dfsg-3 [2639 kB] Get: 150 http://deb.debian.org/debian trixie/main i386 ghostscript i386 10.02.1~dfsg-3 [49.9 kB] Get: 151 http://deb.debian.org/debian trixie/main i386 libcdt5 i386 2.42.2-8 [39.9 kB] Get: 152 http://deb.debian.org/debian trixie/main i386 libcgraph6 i386 2.42.2-8 [67.1 kB] Get: 153 http://deb.debian.org/debian trixie/main i386 libaom3 i386 3.8.2-2 [1910 kB] Get: 154 http://deb.debian.org/debian trixie/main i386 libabsl20220623 i386 20220623.1-3 [447 kB] Get: 155 http://deb.debian.org/debian trixie/main i386 libgav1-1 i386 0.18.0-1+b1 [307 kB] Get: 156 http://deb.debian.org/debian trixie/main i386 librav1e0 i386 0.7.1-2 [650 kB] Get: 157 http://deb.debian.org/debian trixie/main i386 libyuv0 i386 0.0~git202401110.af6ac82-1 [108 kB] Get: 158 http://deb.debian.org/debian trixie/main i386 libavif16 i386 1.0.4-1 [112 kB] Get: 159 http://deb.debian.org/debian trixie/main i386 libxpm4 i386 1:3.5.17-1 [57.5 kB] Get: 160 http://deb.debian.org/debian trixie/main i386 libgd3 i386 2.3.3-9+b1 [129 kB] Get: 161 http://deb.debian.org/debian trixie/main i386 libgts-0.7-5 i386 0.7.6+darcs121130-5+b1 [162 kB] Get: 162 http://deb.debian.org/debian trixie/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 163 http://deb.debian.org/debian trixie/main i386 libxcb-render0 i386 1.15-1 [116 kB] Get: 164 http://deb.debian.org/debian trixie/main i386 libxcb-shm0 i386 1.15-1 [106 kB] Get: 165 http://deb.debian.org/debian trixie/main i386 libxrender1 i386 1:0.9.10-1.1 [34.1 kB] Get: 166 http://deb.debian.org/debian trixie/main i386 libcairo2 i386 1.18.0-1+b1 [587 kB] Get: 167 http://deb.debian.org/debian trixie/main i386 libfribidi0 i386 1.0.13-3+b1 [71.8 kB] Get: 168 http://deb.debian.org/debian trixie/main i386 libgraphite2-3 i386 1.3.14-2 [77.7 kB] Get: 169 http://deb.debian.org/debian trixie/main i386 libharfbuzz0b i386 8.3.0-2 [2234 kB] Get: 170 http://deb.debian.org/debian trixie/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 171 http://deb.debian.org/debian trixie/main i386 libdatrie1 i386 0.2.13-3 [39.5 kB] Get: 172 http://deb.debian.org/debian trixie/main i386 libthai0 i386 0.1.29-2 [50.1 kB] Get: 173 http://deb.debian.org/debian trixie/main i386 libpango-1.0-0 i386 1.52.0+ds-1 [224 kB] Get: 174 http://deb.debian.org/debian trixie/main i386 libpangoft2-1.0-0 i386 1.52.0+ds-1 [51.0 kB] Get: 175 http://deb.debian.org/debian trixie/main i386 libpangocairo-1.0-0 i386 1.52.0+ds-1 [35.9 kB] Get: 176 http://deb.debian.org/debian trixie/main i386 libpathplan4 i386 2.42.2-8 [42.0 kB] Get: 177 http://deb.debian.org/debian trixie/main i386 libgvc6 i386 2.42.2-8 [712 kB] Get: 178 http://deb.debian.org/debian trixie/main i386 libgvpr2 i386 2.42.2-8 [198 kB] Get: 179 http://deb.debian.org/debian trixie/main i386 liblab-gamut1 i386 2.42.2-8 [198 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 libxmu6 i386 2:1.1.3-3 [62.5 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 libxaw7 i386 2:1.0.14-1 [209 kB] Get: 182 http://deb.debian.org/debian trixie/main i386 graphviz i386 2.42.2-8 [576 kB] Get: 183 http://deb.debian.org/debian trixie/main i386 hdf5-helpers i386 1.10.10+repack-3+b1 [23.5 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 hicolor-icon-theme all 0.17-2 [11.4 kB] Get: 185 http://deb.debian.org/debian trixie/main i386 icu-devtools i386 72.1-4+b1 [216 kB] Get: 186 http://deb.debian.org/debian trixie/main i386 imagemagick-6.q16 i386 8:6.9.12.98+dfsg1-5+b1 [290 kB] Get: 187 http://deb.debian.org/debian trixie/main i386 imagemagick i386 8:6.9.12.98+dfsg1-5+b1 [19.5 kB] Get: 188 http://deb.debian.org/debian trixie/main i386 libaec0 i386 1.1.3-1 [24.5 kB] Get: 189 http://deb.debian.org/debian trixie/main i386 libsz2 i386 1.1.3-1 [7824 B] Get: 190 http://deb.debian.org/debian trixie/main i386 libaec-dev i386 1.1.3-1 [22.4 kB] Get: 191 http://deb.debian.org/debian trixie/main i386 libsuitesparseconfig7 i386 1:7.6.1+dfsg-1 [22.5 kB] Get: 192 http://deb.debian.org/debian trixie/main i386 libamd3 i386 1:7.6.1+dfsg-1 [41.4 kB] Get: 193 http://deb.debian.org/debian trixie/main i386 libapache-pom-java all 29-2 [5276 B] Get: 194 http://deb.debian.org/debian trixie/main i386 libboost1.83-dev i386 1.83.0-2+b2 [10.6 MB] Get: 195 http://deb.debian.org/debian trixie/main i386 libboost-date-time1.83.0 i386 1.83.0-2+b2 [230 kB] Get: 196 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83.0 i386 1.83.0-2+b2 [341 kB] Get: 197 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83-dev i386 1.83.0-2+b2 [383 kB] Get: 198 http://deb.debian.org/debian trixie/main i386 libboost-date-time1.83-dev i386 1.83.0-2+b2 [239 kB] Get: 199 http://deb.debian.org/debian trixie/main i386 libboost-date-time-dev i386 1.83.0.2+b2 [3596 B] Get: 200 http://deb.debian.org/debian trixie/main i386 libboost-dev i386 1.83.0.2+b2 [3840 B] Get: 201 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83.0 i386 1.83.0-2+b2 [328 kB] Get: 202 http://deb.debian.org/debian trixie/main i386 libicu-dev i386 72.1-4+b1 [10.6 MB] Get: 203 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83-dev i386 1.83.0-2+b2 [347 kB] Get: 204 http://deb.debian.org/debian trixie/main i386 libboost-iostreams1.83-dev i386 1.83.0-2+b2 [264 kB] Get: 205 http://deb.debian.org/debian trixie/main i386 libboost-iostreams-dev i386 1.83.0.2+b2 [3588 B] Get: 206 http://deb.debian.org/debian trixie/main i386 libboost-math1.83.0 i386 1.83.0-2+b2 [440 kB] Get: 207 http://deb.debian.org/debian trixie/main i386 libboost-math1.83-dev i386 1.83.0-2+b2 [523 kB] Get: 208 http://deb.debian.org/debian trixie/main i386 libboost-math-dev i386 1.83.0.2+b2 [3800 B] Get: 209 http://deb.debian.org/debian trixie/main i386 libbtf2 i386 1:7.6.1+dfsg-1 [24.2 kB] Get: 210 http://deb.debian.org/debian trixie/main i386 libcamd3 i386 1:7.6.1+dfsg-1 [39.3 kB] Get: 211 http://deb.debian.org/debian trixie/main i386 libccolamd3 i386 1:7.6.1+dfsg-1 [41.8 kB] Get: 212 http://deb.debian.org/debian trixie/main i386 libcolamd3 i386 1:7.6.1+dfsg-1 [33.9 kB] Get: 213 http://deb.debian.org/debian trixie/main i386 libcholmod5 i386 1:7.6.1+dfsg-1 [714 kB] Get: 214 http://deb.debian.org/debian trixie/main i386 libcommons-parent-java all 56-1 [10.8 kB] Get: 215 http://deb.debian.org/debian trixie/main i386 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 216 http://deb.debian.org/debian trixie/main i386 libcurl3-gnutls i386 8.5.0-2 [454 kB] Get: 217 http://deb.debian.org/debian trixie/main i386 libcurl4-openssl-dev i386 8.5.0-2 [582 kB] Get: 218 http://deb.debian.org/debian trixie/main i386 libcxsparse4 i386 1:7.6.1+dfsg-1 [99.2 kB] Get: 219 http://deb.debian.org/debian trixie/main i386 libdouble-conversion3 i386 3.3.0-1+b1 [44.9 kB] Get: 220 http://deb.debian.org/debian trixie/main i386 libdrm-common all 2.4.120-2 [7688 B] Get: 221 http://deb.debian.org/debian trixie/main i386 libdrm2 i386 2.4.120-2 [41.4 kB] Get: 222 http://deb.debian.org/debian trixie/main i386 libdrm-amdgpu1 i386 2.4.120-2 [24.4 kB] Get: 223 http://deb.debian.org/debian trixie/main i386 libpciaccess0 i386 0.17-3 [53.6 kB] Get: 224 http://deb.debian.org/debian trixie/main i386 libdrm-intel1 i386 2.4.120-2 [66.5 kB] Get: 225 http://deb.debian.org/debian trixie/main i386 libdrm-nouveau2 i386 2.4.120-2 [20.8 kB] Get: 226 http://deb.debian.org/debian trixie/main i386 libdrm-radeon1 i386 2.4.120-2 [23.0 kB] Get: 227 http://deb.debian.org/debian trixie/main i386 libglvnd0 i386 1.7.0-1 [43.7 kB] Get: 228 http://deb.debian.org/debian trixie/main i386 libwayland-server0 i386 1.22.0-2.1+b1 [34.8 kB] Get: 229 http://deb.debian.org/debian trixie/main i386 libxcb-randr0 i386 1.15-1 [118 kB] Get: 230 http://deb.debian.org/debian trixie/main i386 libgbm1 i386 23.3.5-1 [41.4 kB] Get: 231 http://deb.debian.org/debian trixie/main i386 libglapi-mesa i386 23.3.5-1 [35.4 kB] Get: 232 http://deb.debian.org/debian trixie/main i386 libwayland-client0 i386 1.22.0-2.1+b1 [26.4 kB] Get: 233 http://deb.debian.org/debian trixie/main i386 libx11-xcb1 i386 2:1.8.7-1 [232 kB] Get: 234 http://deb.debian.org/debian trixie/main i386 libxcb-dri2-0 i386 1.15-1 [107 kB] Get: 235 http://deb.debian.org/debian trixie/main i386 libxcb-dri3-0 i386 1.15-1 [107 kB] Get: 236 http://deb.debian.org/debian trixie/main i386 libxcb-present0 i386 1.15-1 [106 kB] Get: 237 http://deb.debian.org/debian trixie/main i386 libxcb-sync1 i386 1.15-1 [109 kB] Get: 238 http://deb.debian.org/debian trixie/main i386 libxcb-xfixes0 i386 1.15-1 [110 kB] Get: 239 http://deb.debian.org/debian trixie/main i386 libxshmfence1 i386 1.3-1 [8976 B] Get: 240 http://deb.debian.org/debian trixie/main i386 libegl-mesa0 i386 23.3.5-1 [128 kB] Get: 241 http://deb.debian.org/debian trixie/main i386 libegl1 i386 1.7.0-1 [35.9 kB] Get: 242 http://deb.debian.org/debian trixie/main i386 libxcb-glx0 i386 1.15-1 [124 kB] Get: 243 http://deb.debian.org/debian trixie/main i386 libxfixes3 i386 1:6.0.0-2 [23.0 kB] Get: 244 http://deb.debian.org/debian trixie/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB] Get: 245 http://deb.debian.org/debian trixie/main i386 libvulkan1 i386 1.3.275.0-1 [141 kB] Get: 246 http://deb.debian.org/debian trixie/main i386 libllvm17 i386 1:17.0.6-5 [27.7 MB] Get: 247 http://deb.debian.org/debian trixie/main i386 libsensors-config all 1:3.6.0-9 [14.6 kB] Get: 248 http://deb.debian.org/debian trixie/main i386 libsensors5 i386 1:3.6.0-9 [35.4 kB] Get: 249 http://deb.debian.org/debian trixie/main i386 libgl1-mesa-dri i386 23.3.5-1 [8327 kB] Get: 250 http://deb.debian.org/debian trixie/main i386 libglx-mesa0 i386 23.3.5-1 [157 kB] Get: 251 http://deb.debian.org/debian trixie/main i386 libglx0 i386 1.7.0-1 [37.8 kB] Get: 252 http://deb.debian.org/debian trixie/main i386 libgl1 i386 1.7.0-1 [82.0 kB] Get: 253 http://deb.debian.org/debian trixie/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 254 http://deb.debian.org/debian trixie/main i386 x11proto-dev all 2023.2-1 [598 kB] Get: 255 http://deb.debian.org/debian trixie/main i386 libxau-dev i386 1:1.0.9-1 [23.3 kB] Get: 256 http://deb.debian.org/debian trixie/main i386 libxdmcp-dev i386 1:1.1.2-3 [42.7 kB] Get: 257 http://deb.debian.org/debian trixie/main i386 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 258 http://deb.debian.org/debian trixie/main i386 libpthread-stubs0-dev i386 0.4-1 [5340 B] Get: 259 http://deb.debian.org/debian trixie/main i386 libxcb1-dev i386 1.15-1 [185 kB] Get: 260 http://deb.debian.org/debian trixie/main i386 libx11-dev i386 2:1.8.7-1 [901 kB] Get: 261 http://deb.debian.org/debian trixie/main i386 libglx-dev i386 1.7.0-1 [15.5 kB] Get: 262 http://deb.debian.org/debian trixie/main i386 libgl-dev i386 1.7.0-1 [100 kB] Get: 263 http://deb.debian.org/debian trixie/main i386 libegl-dev i386 1.7.0-1 [19.2 kB] Get: 264 http://deb.debian.org/debian trixie/main i386 libpkgconf3 i386 1.8.1-1+b2 [38.5 kB] Get: 265 http://deb.debian.org/debian trixie/main i386 pkgconf-bin i386 1.8.1-1+b2 [30.2 kB] Get: 266 http://deb.debian.org/debian trixie/main i386 pkgconf i386 1.8.1-1+b2 [26.2 kB] Get: 267 http://deb.debian.org/debian trixie/main i386 pkg-config i386 1.8.1-1+b2 [14.0 kB] Get: 268 http://deb.debian.org/debian trixie/main i386 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 269 http://deb.debian.org/debian trixie/main i386 libevdev2 i386 1.13.1+dfsg-1 [30.3 kB] Get: 270 http://deb.debian.org/debian trixie/main i386 libfile-which-perl all 1.27-2 [15.1 kB] Get: 271 http://deb.debian.org/debian trixie/main i386 libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 272 http://deb.debian.org/debian trixie/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Get: 273 http://deb.debian.org/debian trixie/main i386 libglpk40 i386 5.0-1+b1 [420 kB] Get: 274 http://deb.debian.org/debian trixie/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-2+b1 [330 kB] Get: 275 http://deb.debian.org/debian trixie/main i386 libgmp-dev i386 2:6.3.0+dfsg-2+b1 [659 kB] Get: 276 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg-3+b1 [915 kB] Get: 277 http://deb.debian.org/debian trixie/main i386 libklu2 i386 1:7.6.1+dfsg-1 [91.2 kB] Get: 278 http://deb.debian.org/debian trixie/main i386 libldl3 i386 1:7.6.1+dfsg-1 [23.4 kB] Get: 279 http://deb.debian.org/debian trixie/main i386 libsuitesparse-mongoose3 i386 1:7.6.1+dfsg-1 [52.6 kB] Get: 280 http://deb.debian.org/debian trixie/main i386 libumfpack6 i386 1:7.6.1+dfsg-1 [308 kB] Get: 281 http://deb.debian.org/debian trixie/main i386 librbio4 i386 1:7.6.1+dfsg-1 [43.5 kB] Get: 282 http://deb.debian.org/debian trixie/main i386 libspqr4 i386 1:7.6.1+dfsg-1 [159 kB] Get: 283 http://deb.debian.org/debian trixie/main i386 libspex2 i386 1:7.6.1+dfsg-1 [53.1 kB] Get: 284 http://deb.debian.org/debian trixie/main i386 libparu0 i386 1:7.6.1+dfsg-1 [75.9 kB] Get: 285 http://deb.debian.org/debian trixie/main i386 libsuitesparse-dev i386 1:7.6.1+dfsg-1 [1657 kB] Get: 286 http://deb.debian.org/debian trixie/main i386 libglpk-dev i386 5.0-1+b1 [509 kB] Get: 287 http://deb.debian.org/debian trixie/main i386 libopengl0 i386 1.7.0-1 [29.3 kB] Get: 288 http://deb.debian.org/debian trixie/main i386 libglu1-mesa i386 9.0.2-1.1 [186 kB] Get: 289 http://deb.debian.org/debian trixie/main i386 libopengl-dev i386 1.7.0-1 [5096 B] Get: 290 http://deb.debian.org/debian trixie/main i386 libglu1-mesa-dev i386 9.0.2-1.1 [230 kB] Get: 291 http://deb.debian.org/debian trixie/main i386 libgudev-1.0-0 i386 238-3 [14.8 kB] Get: 292 http://deb.debian.org/debian trixie/main i386 libhdf5-103-1 i386 1.10.10+repack-3+b1 [1177 kB] Get: 293 http://deb.debian.org/debian trixie/main i386 libhdf5-cpp-103-1 i386 1.10.10+repack-3+b1 [138 kB] Get: 294 http://deb.debian.org/debian trixie/main i386 libhdf5-fortran-102 i386 1.10.10+repack-3+b1 [97.9 kB] Get: 295 http://deb.debian.org/debian trixie/main i386 libhdf5-hl-100 i386 1.10.10+repack-3+b1 [74.3 kB] Get: 296 http://deb.debian.org/debian trixie/main i386 libhdf5-hl-fortran-100 i386 1.10.10+repack-3+b1 [41.8 kB] Get: 297 http://deb.debian.org/debian trixie/main i386 libhdf5-hl-cpp-100 i386 1.10.10+repack-3+b1 [21.7 kB] Get: 298 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo-dev i386 1:2.1.5-2+b2 [303 kB] Get: 299 http://deb.debian.org/debian trixie/main i386 libjpeg-dev i386 1:2.1.5-2+b2 [72.1 kB] Get: 300 http://deb.debian.org/debian trixie/main i386 libssl-dev i386 3.1.5-1 [2502 kB] Get: 301 http://deb.debian.org/debian trixie/main i386 libhdf5-dev i386 1.10.10+repack-3+b1 [2773 kB] Get: 302 http://deb.debian.org/debian trixie/main i386 libwacom-common all 2.10.0-1 [62.4 kB] Get: 303 http://deb.debian.org/debian trixie/main i386 libwacom9 i386 2.10.0-1 [23.8 kB] Get: 304 http://deb.debian.org/debian trixie/main i386 libinput-bin i386 1.25.0-1 [24.9 kB] Get: 305 http://deb.debian.org/debian trixie/main i386 libmtdev1 i386 1.1.6-1+b1 [22.6 kB] Get: 306 http://deb.debian.org/debian trixie/main i386 libinput10 i386 1.25.0-1 [143 kB] Get: 307 http://deb.debian.org/debian trixie/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 308 http://deb.debian.org/debian trixie/main i386 libkpathsea6 i386 2023.20230311.66589-9 [157 kB] Get: 309 http://deb.debian.org/debian trixie/main i386 libmd4c0 i386 0.4.8-1+b1 [45.2 kB] Get: 310 http://deb.debian.org/debian trixie/main i386 libmime-charset-perl all 1.013.1-2 [34.0 kB] Get: 311 http://deb.debian.org/debian trixie/main i386 libpaper-utils i386 1.1.29 [8972 B] Get: 312 http://deb.debian.org/debian trixie/main i386 libpcre2-16-0 i386 10.42-4+b1 [244 kB] Get: 313 http://deb.debian.org/debian trixie/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get: 314 http://deb.debian.org/debian trixie/main i386 libpotrace0 i386 1.16-2+b1 [24.2 kB] Get: 315 http://deb.debian.org/debian trixie/main i386 libptexenc1 i386 2023.20230311.66589-9 [48.1 kB] Get: 316 http://deb.debian.org/debian trixie/main i386 shared-mime-info i386 2.4-1 [752 kB] Get: 317 http://deb.debian.org/debian trixie/main i386 libqt5core5a i386 5.15.10+dfsg-7 [2696 kB] Get: 318 http://deb.debian.org/debian trixie/main i386 libqt5concurrent5 i386 5.15.10+dfsg-7 [44.1 kB] Get: 319 http://deb.debian.org/debian trixie/main i386 libqt5dbus5 i386 5.15.10+dfsg-7 [237 kB] Get: 320 http://deb.debian.org/debian trixie/main i386 libqt5network5 i386 5.15.10+dfsg-7 [766 kB] Get: 321 http://deb.debian.org/debian trixie/main i386 libxcb-icccm4 i386 0.4.1-1.1+b1 [27.5 kB] Get: 322 http://deb.debian.org/debian trixie/main i386 libxcb-util1 i386 0.4.0-1+b1 [23.6 kB] Get: 323 http://deb.debian.org/debian trixie/main i386 libxcb-image0 i386 0.4.0-2+b1 [22.8 kB] Get: 324 http://deb.debian.org/debian trixie/main i386 libxcb-keysyms1 i386 0.4.0-1+b2 [16.7 kB] Get: 325 http://deb.debian.org/debian trixie/main i386 libxcb-render-util0 i386 0.3.9-1+b1 [18.7 kB] Get: 326 http://deb.debian.org/debian trixie/main i386 libxcb-shape0 i386 1.15-1 [106 kB] Get: 327 http://deb.debian.org/debian trixie/main i386 libxcb-xinerama0 i386 1.15-1 [105 kB] Get: 328 http://deb.debian.org/debian trixie/main i386 libxcb-xinput0 i386 1.15-1 [134 kB] Get: 329 http://deb.debian.org/debian trixie/main i386 libxcb-xkb1 i386 1.15-1 [131 kB] Get: 330 http://deb.debian.org/debian trixie/main i386 xkb-data all 2.41-2 [795 kB] Get: 331 http://deb.debian.org/debian trixie/main i386 libxkbcommon0 i386 1.6.0-1 [114 kB] Get: 332 http://deb.debian.org/debian trixie/main i386 libxkbcommon-x11-0 i386 1.6.0-1 [16.8 kB] Get: 333 http://deb.debian.org/debian trixie/main i386 libqt5gui5 i386 5.15.10+dfsg-7 [5972 kB] Get: 334 http://deb.debian.org/debian trixie/main i386 libqt5widgets5 i386 5.15.10+dfsg-7 [2665 kB] Get: 335 http://deb.debian.org/debian trixie/main i386 libqt5opengl5 i386 5.15.10+dfsg-7 [163 kB] Get: 336 http://deb.debian.org/debian trixie/main i386 libqt5printsupport5 i386 5.15.10+dfsg-7 [220 kB] Get: 337 http://deb.debian.org/debian trixie/main i386 libqt5sql5 i386 5.15.10+dfsg-7 [135 kB] Get: 338 http://deb.debian.org/debian trixie/main i386 libqt5test5 i386 5.15.10+dfsg-7 [154 kB] Get: 339 http://deb.debian.org/debian trixie/main i386 libqt5xml5 i386 5.15.10+dfsg-7 [135 kB] Get: 340 http://deb.debian.org/debian trixie/main i386 libvulkan-dev i386 1.3.275.0-1 [1310 kB] Get: 341 http://deb.debian.org/debian trixie/main i386 libxext-dev i386 2:1.3.4-1+b1 [110 kB] Get: 342 http://deb.debian.org/debian trixie/main i386 qt5-qmake-bin i386 5.15.10+dfsg-7 [1123 kB] Get: 343 http://deb.debian.org/debian trixie/main i386 qtchooser i386 66-2 [27.8 kB] Get: 344 http://deb.debian.org/debian trixie/main i386 qt5-qmake i386 5.15.10+dfsg-7 [222 kB] Get: 345 http://deb.debian.org/debian trixie/main i386 qtbase5-dev-tools i386 5.15.10+dfsg-7 [848 kB] Get: 346 http://deb.debian.org/debian trixie/main i386 qtbase5-dev i386 5.15.10+dfsg-7 [1122 kB] Get: 347 http://deb.debian.org/debian trixie/main i386 libqt5opengl5-dev i386 5.15.10+dfsg-7 [50.1 kB] Get: 348 http://deb.debian.org/debian trixie/main i386 libqt5svg5 i386 5.15.10-2+b1 [151 kB] Get: 349 http://deb.debian.org/debian trixie/main i386 libqt5svg5-dev i386 5.15.10-2+b1 [13.1 kB] Get: 350 http://deb.debian.org/debian trixie/main i386 libsombok3 i386 2.4.0-2+b1 [33.2 kB] Get: 351 http://deb.debian.org/debian trixie/main i386 libsqlite3-dev i386 3.45.1-1 [1171 kB] Get: 352 http://deb.debian.org/debian trixie/main i386 libsvm3 i386 3.24+ds-6 [44.9 kB] Get: 353 http://deb.debian.org/debian trixie/main i386 libsvm-dev i386 3.24+ds-6 [65.4 kB] Get: 354 http://deb.debian.org/debian trixie/main i386 libsynctex2 i386 2023.20230311.66589-9 [64.6 kB] Get: 355 http://deb.debian.org/debian trixie/main i386 libteckit0 i386 2.5.12+ds1-1 [284 kB] Get: 356 http://deb.debian.org/debian trixie/main i386 libtexlua53-5 i386 2023.20230311.66589-9 [127 kB] Get: 357 http://deb.debian.org/debian trixie/main i386 libunicode-linebreak-perl i386 0.0.20190101-1+b5 [97.5 kB] Get: 358 http://deb.debian.org/debian trixie/main i386 libwildmagic-common all 5.17+cleaned1-7 [7020 kB] Get: 359 http://deb.debian.org/debian trixie/main i386 libwildmagic5 i386 5.17+cleaned1-7 [1593 kB] Get: 360 http://deb.debian.org/debian trixie/main i386 libwildmagic-dev i386 5.17+cleaned1-7 [317 kB] Get: 361 http://deb.debian.org/debian trixie/main i386 libxerces-c3.2 i386 3.2.4+debian-1.1 [951 kB] Get: 362 http://deb.debian.org/debian trixie/main i386 libxerces-c-dev i386 3.2.4+debian-1.1 [1777 kB] Get: 363 http://deb.debian.org/debian trixie/main i386 libxi6 i386 2:1.8.1-1 [81.0 kB] Get: 364 http://deb.debian.org/debian trixie/main i386 libyaml-tiny-perl all 1.74-1 [30.7 kB] Get: 365 http://deb.debian.org/debian trixie/main i386 libzzip-0-13 i386 0.13.72+dfsg.1-1.1+b1 [58.1 kB] Get: 366 http://deb.debian.org/debian trixie/main i386 tex-common all 6.18 [32.5 kB] Get: 367 http://deb.debian.org/debian trixie/main i386 lmodern all 2.005-1 [9480 kB] Get: 368 http://deb.debian.org/debian trixie/main i386 preview-latex-style all 13.2-1 [350 kB] Get: 369 http://deb.debian.org/debian trixie/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 370 http://deb.debian.org/debian trixie/main i386 tex-gyre all 20180621-6 [6209 kB] Get: 371 http://deb.debian.org/debian trixie/main i386 texlive-binaries i386 2023.20230311.66589-9 [8274 kB] Get: 372 http://deb.debian.org/debian trixie/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 373 http://deb.debian.org/debian trixie/main i386 texlive-base all 2023.20240207-1 [22.0 MB] Get: 374 http://deb.debian.org/debian trixie/main i386 texlive-latex-base all 2023.20240207-1 [1255 kB] Get: 375 http://deb.debian.org/debian trixie/main i386 texlive-luatex all 2023.20240207-1 [25.9 MB] Get: 376 http://deb.debian.org/debian trixie/main i386 texlive-plain-generic all 2023.20240207-1 [29.0 MB] Get: 377 http://deb.debian.org/debian trixie/main i386 texlive-extra-utils all 2023.20240207-1 [63.3 MB] Get: 378 http://deb.debian.org/debian trixie/main i386 texlive-font-utils all 2023.20240207-1 [7046 kB] Get: 379 http://deb.debian.org/debian trixie/main i386 texlive-fonts-extra all 2023.20240207-1 [629 MB] Get: 380 http://deb.debian.org/debian trixie/main i386 texlive-fonts-recommended all 2023.20240207-1 [4990 kB] Get: 381 http://deb.debian.org/debian trixie/main i386 texlive-latex-recommended all 2023.20240207-1 [8843 kB] Get: 382 http://deb.debian.org/debian trixie/main i386 texlive-pictures all 2023.20240207-1 [16.7 MB] Get: 383 http://deb.debian.org/debian trixie/main i386 texlive-latex-extra all 2023.20240207-1 [19.7 MB] Fetched 1142 MB in 23s (50.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libfftw3-double3:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19874 files and directories currently installed.) Preparing to unpack .../00-libfftw3-double3_3.3.10-1+b1_i386.deb ... Unpacking libfftw3-double3:i386 (3.3.10-1+b1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../01-libexpat1_2.5.0-2+b2_i386.deb ... Unpacking libexpat1:i386 (2.5.0-2+b2) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../02-libbrotli1_1.1.0-2+b3_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b3) ... Selecting previously unselected package libpng16-16:i386. Preparing to unpack .../03-libpng16-16_1.6.43-1_i386.deb ... Unpacking libpng16-16:i386 (1.6.43-1) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../04-libfreetype6_2.13.2+dfsg-1+b1_i386.deb ... Unpacking libfreetype6:i386 (2.13.2+dfsg-1+b1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../05-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../06-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:i386. Preparing to unpack .../07-libfontenc1_1%3a1.1.8-1_i386.deb ... Unpacking libfontenc1:i386 (1:1.1.8-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../08-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../09-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../10-xfonts-utils_1%3a7.7+6_i386.deb ... Unpacking xfonts-utils (1:7.7+6) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../11-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../12-fontconfig-config_2.15.0-1.1_i386.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../13-libfontconfig1_2.15.0-1.1_i386.deb ... Unpacking libfontconfig1:i386 (2.15.0-1.1) ... Selecting previously unselected package libsharpyuv0:i386. Preparing to unpack .../14-libsharpyuv0_1.3.2-0.4_i386.deb ... Unpacking libsharpyuv0:i386 (1.3.2-0.4) ... Selecting previously unselected package libdav1d7:i386. Preparing to unpack .../15-libdav1d7_1.4.1-1_i386.deb ... Unpacking libdav1d7:i386 (1.4.1-1) ... Selecting previously unselected package libheif-plugin-dav1d:i386. Preparing to unpack .../16-libheif-plugin-dav1d_1.17.6-1_i386.deb ... Unpacking libheif-plugin-dav1d:i386 (1.17.6-1) ... Selecting previously unselected package libde265-0:i386. Preparing to unpack .../17-libde265-0_1.0.15-1_i386.deb ... Unpacking libde265-0:i386 (1.0.15-1) ... Selecting previously unselected package libheif-plugin-libde265:i386. Preparing to unpack .../18-libheif-plugin-libde265_1.17.6-1_i386.deb ... Unpacking libheif-plugin-libde265:i386 (1.17.6-1) ... Selecting previously unselected package libheif1:i386. Preparing to unpack .../19-libheif1_1.17.6-1_i386.deb ... Unpacking libheif1:i386 (1.17.6-1) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../20-libjbig0_2.1-6.1+b1_i386.deb ... Unpacking libjbig0:i386 (2.1-6.1+b1) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../21-libjpeg62-turbo_1%3a2.1.5-2+b2_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:2.1.5-2+b2) ... Selecting previously unselected package liblcms2-2:i386. Preparing to unpack .../22-liblcms2-2_2.14-2+b1_i386.deb ... Unpacking liblcms2-2:i386 (2.14-2+b1) ... Selecting previously unselected package libglib2.0-0:i386. Preparing to unpack .../23-libglib2.0-0_2.78.4-1_i386.deb ... Unpacking libglib2.0-0:i386 (2.78.4-1) ... Selecting previously unselected package liblqr-1-0:i386. Preparing to unpack .../24-liblqr-1-0_0.4.2-2.1_i386.deb ... Unpacking liblqr-1-0:i386 (0.4.2-2.1) ... Selecting previously unselected package libltdl7:i386. Preparing to unpack .../25-libltdl7_2.4.7-7_i386.deb ... Unpacking libltdl7:i386 (2.4.7-7) ... Selecting previously unselected package libopenjp2-7:i386. Preparing to unpack .../26-libopenjp2-7_2.5.0-2+b2_i386.deb ... Unpacking libopenjp2-7:i386 (2.5.0-2+b2) ... Selecting previously unselected package libraw23:i386. Preparing to unpack .../27-libraw23_0.21.2-2_i386.deb ... Unpacking libraw23:i386 (0.21.2-2) ... Selecting previously unselected package libdeflate0:i386. Preparing to unpack .../28-libdeflate0_1.20-1_i386.deb ... Unpacking libdeflate0:i386 (1.20-1) ... Selecting previously unselected package liblerc4:i386. Preparing to unpack .../29-liblerc4_4.0.0+ds-4+b1_i386.deb ... Unpacking liblerc4:i386 (4.0.0+ds-4+b1) ... Selecting previously unselected package libwebp7:i386. Preparing to unpack .../30-libwebp7_1.3.2-0.4_i386.deb ... Unpacking libwebp7:i386 (1.3.2-0.4) ... Selecting previously unselected package libtiff6:i386. Preparing to unpack .../31-libtiff6_4.5.1+git230720-4_i386.deb ... Unpacking libtiff6:i386 (4.5.1+git230720-4) ... Selecting previously unselected package libwebpdemux2:i386. Preparing to unpack .../32-libwebpdemux2_1.3.2-0.4_i386.deb ... Unpacking libwebpdemux2:i386 (1.3.2-0.4) ... Selecting previously unselected package libwebpmux3:i386. Preparing to unpack .../33-libwebpmux3_1.3.2-0.4_i386.deb ... Unpacking libwebpmux3:i386 (1.3.2-0.4) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../34-libxau6_1%3a1.0.9-1_i386.deb ... Unpacking libxau6:i386 (1:1.0.9-1) ... Selecting previously unselected package libbsd0:i386. Preparing to unpack .../35-libbsd0_0.12.2-1_i386.deb ... Unpacking libbsd0:i386 (0.12.2-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../36-libxdmcp6_1%3a1.1.2-3_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../37-libxcb1_1.15-1_i386.deb ... Unpacking libxcb1:i386 (1.15-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../38-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../39-libx11-6_2%3a1.8.7-1_i386.deb ... Unpacking libx11-6:i386 (2:1.8.7-1) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../40-libxext6_2%3a1.3.4-1+b1_i386.deb ... Unpacking libxext6:i386 (2:1.3.4-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../41-libicu72_72.1-4+b1_i386.deb ... Unpacking libicu72:i386 (72.1-4+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../42-libxml2_2.9.14+dfsg-1.3+b2_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package imagemagick-6-common. Preparing to unpack .../43-imagemagick-6-common_8%3a6.9.12.98+dfsg1-5_all.deb ... Unpacking imagemagick-6-common (8:6.9.12.98+dfsg1-5) ... Selecting previously unselected package libmagickcore-6.q16-7:i386. Preparing to unpack .../44-libmagickcore-6.q16-7_8%3a6.9.12.98+dfsg1-5+b1_i386.deb ... Unpacking libmagickcore-6.q16-7:i386 (8:6.9.12.98+dfsg1-5+b1) ... Selecting previously unselected package libmagickwand-6.q16-7:i386. Preparing to unpack .../45-libmagickwand-6.q16-7_8%3a6.9.12.98+dfsg1-5+b1_i386.deb ... Unpacking libmagickwand-6.q16-7:i386 (8:6.9.12.98+dfsg1-5+b1) ... Selecting previously unselected package poppler-data. Preparing to unpack .../46-poppler-data_0.4.12-1_all.deb ... Unpacking poppler-data (0.4.12-1) ... Selecting previously unselected package libpython3.11-minimal:i386. Preparing to unpack .../47-libpython3.11-minimal_3.11.8-1_i386.deb ... Unpacking libpython3.11-minimal:i386 (3.11.8-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../48-python3.11-minimal_3.11.8-1_i386.deb ... Unpacking python3.11-minimal (3.11.8-1) ... Setting up libpython3.11-minimal:i386 (3.11.8-1) ... Setting up libexpat1:i386 (2.5.0-2+b2) ... Setting up python3.11-minimal (3.11.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21991 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.6-1_i386.deb ... Unpacking python3-minimal (3.11.6-1) ... Selecting previously unselected package media-types. 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Unpacking python3.11 (3.11.8-1) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../8-libpython3-stdlib_3.11.6-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.11.6-1) ... Setting up python3-minimal (3.11.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22979 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.6-1_i386.deb ... 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Setting up librbio4:i386 (1:7.6.1+dfsg-1) ... Setting up libboost-date-time1.83-dev:i386 (1.83.0-2+b2) ... Setting up shared-mime-info (2.4-1) ... Setting up libxkbcommon-x11-0:i386 (1.6.0-1) ... Setting up libsvm-dev:i386 (3.24+ds-6) ... Setting up liblapack-dev:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up libeigen3-dev (3.4.0-4) ... Setting up libboost-regex1.83-dev:i386 (1.83.0-2+b2) ... Setting up pkg-config:i386 (1.8.1-1+b2) ... Setting up ucf (3.0043+nmu1) ... Setting up libboost-date-time-dev:i386 (1.83.0.2+b2) ... Setting up coinor-libcoinutils-dev:i386 (2.11.4+repack1-4) ... Setting up libqt5core5a:i386 (5.15.10+dfsg-7) ... Setting up coinor-libosi1v5:i386 (0.108.9+ds-1) ... Setting up libccolamd3:i386 (1:7.6.1+dfsg-1) ... Setting up libxcb-dri2-0:i386 (1.15-1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... 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Setting up libxerces-c3.2:i386 (3.2.4+debian-1.1) ... Setting up libxi6:i386 (2:1.8.1-1) ... Setting up libglx0:i386 (1.7.0-1) ... Setting up preview-latex-style (13.2-1) ... Setting up debhelper (13.15.3) ... Setting up libparu0:i386 (1:7.6.1+dfsg-1) ... Setting up python3 (3.11.6-1) ... Setting up dh-exec (0.29) ... Setting up libxaw7:i386 (2:1.0.14-1) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up libhdf5-hl-cpp-100:i386 (1.10.10+repack-3+b1) ... Setting up doxygen (1.9.8+ds-2) ... Setting up libgl1:i386 (1.7.0-1) ... Setting up libxerces-c-dev:i386 (3.2.4+debian-1.1) ... Setting up libhdf5-fortran-102:i386 (1.10.10+repack-3+b1) ... Setting up coinor-libcbc3.1:i386 (2.10.11+ds1-2) ... Setting up texlive-binaries (2023.20230311.66589-9) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libhdf5-hl-fortran-100:i386 (1.10.10+repack-3+b1) ... Setting up libglx-dev:i386 (1.7.0-1) ... Setting up coinor-libcbc-dev:i386 (2.10.11+ds1-2) ... Setting up texlive-base (2023.20240207-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libgl-dev:i386 (1.7.0-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up libgs10-common (10.02.1~dfsg-3) ... Setting up libvulkan-dev:i386 (1.3.275.0-1) ... Setting up libsuitesparse-dev:i386 (1:7.6.1+dfsg-1) ... Setting up libegl-dev:i386 (1.7.0-1) ... Setting up texlive-luatex (2023.20240207-1) ... Setting up libqt5gui5:i386 (5.15.10+dfsg-7) ... Setting up texlive-plain-generic (2023.20240207-1) ... Setting up libwildmagic5:i386 (5.17+cleaned1-7) ... Setting up libqt5widgets5:i386 (5.15.10+dfsg-7) ... Setting up texlive-font-utils (2023.20240207-1) ... Setting up libqt5printsupport5:i386 (5.15.10+dfsg-7) ... Setting up python3-pygments (2.17.2+dfsg-1) ... Setting up texlive-latex-base (2023.20240207-1) ... Setting up texlive-extra-utils (2023.20240207-1) ... Setting up libglpk-dev:i386 (5.0-1+b1) ... Setting up texlive-fonts-extra (2023.20240207-1) ... Setting up texlive-latex-recommended (2023.20240207-1) ... Setting up libhdf5-dev (1.10.10+repack-3+b1) ... update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglu1-mesa-dev:i386 (9.0.2-1.1) ... Setting up texlive-pictures (2023.20240207-1) ... Setting up cppcheck (2.13.0-2+b1) ... Setting up qtbase5-dev:i386 (5.15.10+dfsg-7) ... Setting up libqt5opengl5:i386 (5.15.10+dfsg-7) ... Setting up texlive-fonts-recommended (2023.20240207-1) ... Setting up libgs10:i386 (10.02.1~dfsg-3) ... Setting up libqt5opengl5-dev:i386 (5.15.10+dfsg-7) ... Setting up libwildmagic-dev:i386 (5.17+cleaned1-7) ... Setting up libqt5svg5:i386 (5.15.10-2+b1) ... Setting up texlive-latex-extra (2023.20240207-1) ... Setting up ghostscript (10.02.1~dfsg-3) ... Setting up libqt5svg5-dev:i386 (5.15.10-2+b1) ... Setting up libheif-plugin-dav1d:i386 (1.17.6-1) ... Setting up libheif-plugin-libde265:i386 (1.17.6-1) ... Setting up libheif1:i386 (1.17.6-1) ... Setting up libmagickcore-6.q16-7:i386 (8:6.9.12.98+dfsg1-5+b1) ... Setting up libgd3:i386 (2.3.3-9+b1) ... Setting up libgvc6 (2.42.2-8) ... Setting up libmagickwand-6.q16-7:i386 (8:6.9.12.98+dfsg1-5+b1) ... Setting up graphviz (2.42.2-8) ... Setting up imagemagick-6.q16 (8:6.9.12.98+dfsg1-5+b1) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up imagemagick (8:6.9.12.98+dfsg1-5+b1) ... Processing triggers for libc-bin (2.37-15) ... Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.33-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/openms-2.6.0+cleaned1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../openms_2.6.0+cleaned1-4_source.changes dpkg-buildpackage: info: source package openms dpkg-buildpackage: info: source version 2.6.0+cleaned1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Anton Gladky dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --buildsystem=cmake --no-parallel dh_testdir -O--buildsystem=cmake -O--no-parallel dh_auto_clean -O--buildsystem=cmake -O--no-parallel dh_autoreconf_clean -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' entering the override_dh_clean target # Remove the generated xpm icon files: rm -f debian/TOPPAS.xpm rm -f debian/TOPPView.xpm # Remove the generated topp.1 man page: rm -f debian/topp.1 dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libopenms2.6.0.substvars debian/libopenms-dev.substvars debian/topp.substvars debian/openms-common.substvars debian/openms-doc.substvars debian/openms.substvars debian/files rm -fr -- debian/libopenms2.6.0/ debian/tmp/ debian/libopenms-dev/ debian/topp/ debian/openms-common/ debian/openms-doc/ debian/openms/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' debian/rules build dh build --buildsystem=cmake --no-parallel dh_testdir -O--buildsystem=cmake -O--no-parallel dh_update_autotools_config -O--buildsystem=cmake -O--no-parallel dh_autoreconf -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' dh_auto_configure -- \ -DDEBIAN_BUILD=ON \ -DHAS_XSERVER=OFF \ -DCMAKE_FIND_LIBRARY_SUFFIXES=".so" \ -DCMAKE_SKIP_RPATH=ON \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DOPENMS_CONTRIB_LIBS="/usr/lib;/usr/lib/i386-linux-gnu" \ -DCMAKE_BUILD_TYPE=release \ -DBOOST_USE_STATIC=OFF \ -DENABLE_STYLE_TESTING=OFF \ -DENABLE_TOPP_TESTING=OFF \ -DENABLE_CLASS_TESTING=OFF \ -DENABLE_PIPELINE_TESTING=OFF \ -DENABLE_TUTORIALS=ON \ -DSEQAN_INCLUDE_DIR=/build/reproducible-path/openms-2.6.0+cleaned1/debian cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DDEBIAN_BUILD=ON -DHAS_XSERVER=OFF -DCMAKE_FIND_LIBRARY_SUFFIXES=.so -DCMAKE_SKIP_RPATH=ON -DCMAKE_INSTALL_PREFIX=/usr -DOPENMS_CONTRIB_LIBS=/usr/lib\;/usr/lib/i386-linux-gnu -DCMAKE_BUILD_TYPE=release -DBOOST_USE_STATIC=OFF -DENABLE_STYLE_TESTING=OFF -DENABLE_TOPP_TESTING=OFF -DENABLE_CLASS_TESTING=OFF -DENABLE_PIPELINE_TESTING=OFF -DENABLE_TUTORIALS=ON -DSEQAN_INCLUDE_DIR=/build/reproducible-path/openms-2.6.0\+cleaned1/debian .. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at CMakeLists.txt:73 (include): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake-3.28/Modules/Dart.cmake:47 (message): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:73 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Building OpenMS 2.6.0 -- [CMake cannot track Git commits and branching, since Git or the .git folder was not found. ('-D GIT_TRACKING=On')] -- OpenMP support requested: ON -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Architecture: 32 bit -- Performing Test WITH_FPIC -- Performing Test WITH_FPIC - Success -- Compiler checks for conversion: OFF -- Collection of usage statistics and update notifications enabled. -- If you don't want this information to be transmitted to our update sever, you can: -- - Switch the build variable ENABLE_UPDATE_CHECK to OFF to remove the functionality at build time. -- - Set the environment variable OPENMS_DISABLE_UPDATE_CHECK to disable the functionality at runtime. CMake Deprecation Warning at src/openswathalgo/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") CMake Deprecation Warning at src/openswathalgo/thirdparty/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openswathalgo/thirdparty/MIToolbox/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Adding library OpenSwathAlgo -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Adding library OpenSwathAlgo - SUCCESS CMake Deprecation Warning at src/openms/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/eol-bspline/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/evergreen/src/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/IsoSpec/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/json/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found XercesC: /usr/lib/i386-linux-gnu/libxerces-c.so (found version "3.2.4") -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") found components: iostreams date_time math_c99 regex -- Found Boost version 1.83.0 -- Found SEQAN: /build/reproducible-path/openms-2.6.0+cleaned1/debian (found suitable version "1.4.2", minimum required is "1.4.0") -- Found LIBSVM: /usr/lib/i386-linux-gnu/libsvm.so (found suitable version "3.2.4", minimum required is "2.91") -- Found COIN: /usr/include -- Found GLPK: /usr/lib/i386-linux-gnu/libglpk.so -- Found ZLIB: /usr/lib/i386-linux-gnu/libz.so (found version "1.3.#define ZLIB_VERSION "1.3"") -- Found BZip2: /usr/lib/i386-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit in /usr/lib/i386-linux-gnu/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib/i386-linux-gnu/libbz2.so - found -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.3.4") -- Found WM5: /usr/include/libwildmagic CMake Warning (dev) at /usr/share/cmake-3.28/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (SQLite) does not match the name of the calling package (SQLITE). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/modules/FindSQLITE.cmake:201 (find_package_handle_standard_args) src/openms/cmake_findExternalLibs.cmake:134 (find_package) src/openms/CMakeLists.txt:70 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found SQLite: /usr/include (found version "3.45.1") -- Found HDF5: /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libpthread.a;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so;/usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libpthread.a;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so (found version "1.10.10") found components: C CXX HL -- Found Qt 5.15.10 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Info: CF_OPENMS_DATA_PATH: -- Info: CF_OPENMS_DOC_PATH: -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned char -- Check size of unsigned char - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include sys/resource.h -- Looking for C++ include sys/resource.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Adding library OpenMS -- Adding library OpenMS - SUCCESS CMake Deprecation Warning at src/superhirn/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") -- Adding library SuperHirn -- Adding library SuperHirn - SUCCESS -- Adding library OpenMS_GUI -- Adding library OpenMS_GUI - SUCCESS -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.rc) found for SwathWizard. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded. CMake Deprecation Warning at src/tests/CMakeLists.txt:35 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Documentation is built (-D ENABLE_DOCS=On). -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot CMake Warning (dev) at doc/CMakeLists.txt:142 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. This warning is for project developers. Use -Wno-dev to suppress it. -- Enabled tutorials (-D ENABLE_TUTORIALS=On). -- -- ----------------------------------------------------------------- -- -- You have successfully configured OpenMS. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done (6.6s) -- Generating done (2.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu # Prepare the xpm-formatted pixmaps for the Debian menu system. # Setting imagemagick to Build-Depends, for use of convert. convert src/openms_gui/source/VISUAL/ICONS/TOPPAS.png -resize 32x32 debian/TOPPAS.xpm convert src/openms_gui/source/VISUAL/ICONS/TOPPView.png -resize 32x32 debian/TOPPView.xpm make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/libopenms-dev.debhelper.log debian/libopenms2.6.0.debhelper.log debian/openms-common.debhelper.log debian/openms-doc.debhelper.log debian/openms.debhelper.log debian/topp.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' # Build the libs and executable binaries # Build the documentation, which needs a running XWindow server. We # thus use the doc_minimal target. # # ATTENTION, as of 20200514, the pdfLatex compilation fails with error # ! LaTeX Error: Command `\Bbbk' already defined. # This is why we commented out the doc_tutorials target below. # See also the override_dh_auto_configure target above, that disables # that specific doc_tutorials target. VERBOSE=1 \ dh_auto_build -- \ OpenMS GUI TOPP UTILS cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" OpenMS GUI TOPP UTILS VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 OpenMS make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 53 make -f CMakeFiles/Makefile2 src/openms/CMakeFiles/OpenMS.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:69:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 69 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c: In function 'void* checkedCalloc(size_t, size_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:80: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:69:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 69 | std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /usr/include/c++/13/complex:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:40: /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp: In function 'void OpenSwath::normalize(const std::vector&, double, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp:54:106: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = divides; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 54 | std::transform(intensities.begin(), intensities.end(), normalized_intensities.begin(), std::bind2nd(std::divides(), normalizer)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438: /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp [ 1%] Linking CXX shared library ../../lib/i386-linux-gnu/libOpenSwathAlgo.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAlgo.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libOpenSwathAlgo.so.2.6.0 -o ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Automatic MOC for target OpenMS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/config.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/openms_data_path.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/openms_package_version.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/HiddenMarkovModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PercolatorFeatureSetHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelBSpline.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLowess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/LocalLinearMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ConsoleUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/INIUpdater.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/OpenSwathBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AAIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/CrossLinksDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DecoyGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzyme.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Element.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationsDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Residue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueModification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Tagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/WeightWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ClassTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Constants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/EnumHelpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Exception.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Factory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FuzzyStringComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/GlobalExceptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FactoryBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Init.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Helpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogConfigHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Macros.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/MacrosTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/RAIICleanup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/SingletonRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/StreamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/TypeAsString.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Types.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdIndexer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/VersionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Adduct.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVReference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ChargePair.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Date.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/KDTree.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtilsIO.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Map.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MassExplainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MatchedIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Param.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/QTCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/String.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MapUtilities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Base64.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2Ifstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2InputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CVMappingFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CachedMzML.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CompressedInputSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CsvFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTA2DFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/EDTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FASTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipIfstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipInputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/FidHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HDF5Connector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IdXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/KroenikFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/LibSVMEncoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeaturePickerFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MS2File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSNumpressCoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSstatsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MsInspectFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzDataFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzIdentMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTab.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSACSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSAXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OSWFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PTMXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ParamXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFileMascot.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ProtXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/QcMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SVOutStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqliteConnector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SwathFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TextFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TraMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TransformationXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/UnimodXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzDataValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzIdentMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/SemanticValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/TraMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/XMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzQuantMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ZlibCompression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/DataStructures.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/IMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/ISpectrumAccess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/AreaIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/BaseFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConversionHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/DPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Feature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureHandle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSChromatogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MassTrace.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/PeakIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeManager.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RichPeak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/SpectrumHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardDeclarations.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BilinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/CubicSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/GridSearch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSAC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/LinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MSNumpress.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NNLS/NNLS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/SplineBisection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AveragePosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GaussFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/BasicStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/ROCCurve.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/RegressionUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Acquisition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AcquisitionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermListInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ContactPerson.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataArrays.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataProcessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Digestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIDTagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIdentifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Gradient.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DBSearchParam.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/HPLC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingSoftware.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedSequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MetaData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeParentMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMolecule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeQueryMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMoleculeGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/QueryMatchGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoreType.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Identification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IdentificationHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Instrument.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/InstrumentSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MSQuantifications.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonDetector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MassAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterfaceUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Modification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideEvidence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Precursor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Product.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SampleTreatment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Sample.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ScanWindow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Software.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SourceFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Tagging.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Contaminants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/DBSuitability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FWHM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FragmentMassError.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MissedCleavages.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MzCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/PeptideMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/QCBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/RTAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/TIC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/MSSim.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RTSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/SimTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/BuildInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/JavaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/PythonInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/RWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/StopWatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/SysInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/UpdateCheck.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDRipper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/PScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ConsoleUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/INIUpdater.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ParameterInformation.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/TOPPBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ToolHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/AASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/CrossLinksDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DecoyGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Element.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ElementDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationsDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Residue.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueModification.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Ribonucleotide.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Tagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/WeightWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ClassTest.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Constants.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Exception.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/FuzzyStringComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Init.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogConfigHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ProgressLogger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/PrecisionWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/RAIICleanup.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/SingletonRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/StreamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/TypeAsString.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdIndexer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Types.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/VersionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Adduct.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappings.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVReference.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CalibrationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Compomer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ChargePair.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DPosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DRange.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DataValue.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Date.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DateTime.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/LPWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/GridFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Map.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MassExplainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Matrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Param.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/QTCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/String.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ToolDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/ID/IDFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Base64.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2Ifstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2InputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CVMappingFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CachedMzML.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ChromeleonFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CompressedInputSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ConsensusXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ControlledVocabulary.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CsvFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTA2DFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/EDTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ExperimentalDesignFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FASTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FeatureXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipIfstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipInputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HDF5Connector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IBSpectraFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IdXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/KroenikFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/LibSVMEncoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeatureQCFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MS2File.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSNumpressCoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSstatsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotRemoteQuery.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MsInspectFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzDataFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzIdentMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzQuantMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTab.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSACSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSAXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OSWFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PTMXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PeakTypeEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ParamXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFileMascot.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PercolatorOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ProtXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/QcMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SVOutStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SpecArrayFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqliteConnector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SwathFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TextFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ToolDescriptionFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TraMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TransformationXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/UnimodXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XQuestResultXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ZlibCompression.cpp" AutoGen: Parsing "SRC:/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/AreaIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramTools.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/BaseFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConversionHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/DPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureHandle.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Feature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMTransitionGroup.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSChromatogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MassTrace.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/OnDiscMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/PeakIndex.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RangeManager.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RichPeak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/SpectrumHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/StandardTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BilinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/CubicSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/LinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/EmgGradientDescent.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MSNumpress.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/GridSearch.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MathFunctions.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NNLS/NNLS.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSAC.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/SplineBisection.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AveragePosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GaussFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/Histogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/ROCCurve.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Acquisition.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AcquisitionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermList.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermListInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ChromatogramSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ContactPerson.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataArrays.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataProcessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Digestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIDTagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIdentifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Gradient.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/HPLC.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Identification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IdentificationHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Instrument.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/InstrumentSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonDetector.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MSQuantifications.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MassAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideEvidence.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Modification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Precursor.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Product.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Sample.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ScanWindow.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SampleTreatment.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Software.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SourceFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Tagging.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/DBSuitability.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Contaminants.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FWHM.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MissedCleavages.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FragmentMassError.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2IdentificationRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2SpectrumStats.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MzCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/RTAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/QCBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/PeptideMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/TIC.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DetectabilitySimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DigestSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/IonizationSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/MSSim.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RTSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/ExternalProcess.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/File.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/FileWatcher.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/JavaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/NetworkGetRequest.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/PythonInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/RWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/StopWatch.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/SysInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/UpdateCheck.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/FileWatcher.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] creating build_config.h file ({event: PRE_BUILD}, {filename: build_config.h}) cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include/OpenMS/build_config_release.h /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include/OpenMS/build_config.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/OpenMS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp:10, from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp:2: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:134:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 134 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -MF CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ClassTest.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Constants.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Exception.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/FuzzyStringComparator.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp: In constructor 'OpenMS::Exception::GlobalExceptionHandler::GlobalExceptionHandler()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp:65:26: warning: 'void (* std::set_unexpected(unexpected_handler))()' is deprecated [-Wdeprecated-declarations] 65 | std::set_unexpected(terminate); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ In file included from /usr/include/c++/13/ios:41, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp:38: /usr/include/c++/13/exception:89:22: note: declared here 89 | unexpected_handler set_unexpected(unexpected_handler) _GLIBCXX_USE_NOEXCEPT; | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Init.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/LogConfigHandler.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/LogStream.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/PrecisionWrapper.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ProgressLogger.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/RAIICleanup.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/SingletonRegistry.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/StreamHandler.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/TypeAsString.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Types.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdGenerator.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdIndexer.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdInterface.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:144:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 144 | result = String(__DATE__) + ", " + __TIME__; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:144:42: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 144 | result = String(__DATE__) + ", " + __TIME__; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp: In static member function 'static OpenMS::VersionInfo::VersionDetails OpenMS::VersionInfo::getVersionStruct()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:169:51: warning: implicitly-declared 'OpenMS::VersionInfo::VersionDetails& OpenMS::VersionInfo::VersionDetails::operator=(const OpenMS::VersionInfo::VersionDetails&)' is deprecated [-Wdeprecated-copy] 169 | result = VersionDetails::create(getVersion()); | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:79:7: note: because 'OpenMS::VersionInfo::VersionDetails' has user-provided 'OpenMS::VersionInfo::VersionDetails::VersionDetails(const OpenMS::VersionInfo::VersionDetails&)' 79 | VersionDetails(const VersionDetails & other): | ^~~~~~~~~~~~~~ [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/ExternalProcess.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/File.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/FileWatcher.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/JavaInfo.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/NetworkGetRequest.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/PythonInfo.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/RWrapper.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem 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-DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/SysInfo.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/UpdateCheck.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/AveragePosition.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GaussFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/Histogram.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegression.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:271:40: note: by 'OpenMS::Math::PosteriorErrorProbabilityModel& OpenMS::Math::PosteriorErrorProbabilityModel::operator=(const OpenMS::Math::PosteriorErrorProbabilityModel&)' 271 | PosteriorErrorProbabilityModel & operator=(const PosteriorErrorProbabilityModel & rhs); | ^~~~~~~~ [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/ROCCurve.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/BilinearInterpolation.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/BSpline2d.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/CubicSpline2d.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/EmgGradientDescent.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/EmgGradientDescent.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/GridSearch.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/LinearInterpolation.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/MathFunctions.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/MSNumpress.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSAC.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModel.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelLinear.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/SplineBisection.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/NNLS/NNLS.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Adduct.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CalibrationData.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CalibrationData.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ChargePair.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Compomer.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/hashtable_policy.h:36, from /usr/include/c++/13/bits/hashtable.h:35, from /usr/include/c++/13/bits/unordered_map.h:33, from /usr/include/c++/13/unordered_map:41, from /usr/include/c++/13/functional:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVReference.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappings.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DPosition.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DRange.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DataValue.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Date.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DateTime.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/set:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp: In member function 'void OpenMS::LPWrapper::readProblem(const OpenMS::String&, const OpenMS::String&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp:472:69: warning: unused parameter 'format' [-Wunused-parameter] 472 | void LPWrapper::readProblem(const String& filename, const String& format) // format=(LP,MPS,GLPK) | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp: In member function 'OpenMS::Int OpenMS::LPWrapper::solve(SolverParam&, OpenMS::Size)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp:529:37: warning: unused parameter 'solver_param' [-Wunused-parameter] 529 | Int LPWrapper::solve(SolverParam& solver_param, const Size | ~~~~~~~~~~~~~^~~~~~~~~~~~ [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Map.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/MassExplainer.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Matrix.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Param.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/QTCluster.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/String.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/StringListUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/StringUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/13/bits/alloc_traits.h:538:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; allocator_type = std::allocator]' /usr/include/c++/13/bits/stl_vector.h:1283:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolExternalDetails]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:137:33: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:35: /usr/include/c++/13/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {OpenMS::Internal::ToolExternalDetails}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/13/bits/stl_uninitialized.h:384:41: required from '_ForwardIterator std::__uninitialized_move_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = OpenMS::Internal::ToolExternalDetails*; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Allocator = allocator]' /usr/include/c++/13/bits/vector.tcc:766:34: required from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; iterator = std::vector::iterator]' /usr/include/c++/13/bits/stl_vector.h:1483:19: required from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; iterator = std::vector::iterator; const_iterator = std::vector::const_iterator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:157:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/alloc_traits.h:33, from /usr/include/c++/13/ext/alloc_traits.h:34, from /usr/include/c++/13/bits/basic_string.h:39, from /usr/include/c++/13/string:54: /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(OpenMS::Internal::ToolExternalDetails&&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Acquisition.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AcquisitionInfo.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTerm.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTermList.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTermListInterface.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ChromatogramSettings.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ChromatogramSettings.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ContactPerson.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DataArrays.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DataProcessing.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Digestion.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DocumentIDTagger.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DocumentIdentifier.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalDesign.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalDesign.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalSettings.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Gradient.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/HPLC.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Identification.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IdentificationHit.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Instrument.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/InstrumentSettings.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IonDetector.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IonSource.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MSQuantifications.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MSQuantifications.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MassAnalyzer.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfo.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoDescription.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoInterface.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoRegistry.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Modification.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideEvidence.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideHit.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideIdentification.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Precursor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Precursor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Product.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinHit.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Sample.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SampleTreatment.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ScanWindow.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Software.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SourceFile.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumIdentification.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumLookup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumLookup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumSettings.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumSettings.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Tagging.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationData.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationData.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/AreaIterator.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/hashtable_policy.h:36, from /usr/include/c++/13/bits/hashtable.h:35, from /usr/include/c++/13/bits/unordered_map.h:33, from /usr/include/c++/13/unordered_map:41, from /usr/include/c++/13/functional:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConversionHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConversionHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConversionHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/DPeak.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/DPeak.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Feature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Feature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureMap.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureMap.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MassTrace.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MassTrace.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMTransitionGroup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMTransitionGroup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSSpectrum.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSSpectrum.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:51: In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = double; _Up = double; bool _IsMove = true]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42, inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31, inlined from '_OI std::move(_II, _II, _OI) [with _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:665:38, inlined from 'OpenMS::DPosition::DPosition(OpenMS::DPosition&&) [with unsigned int D = 1; TCoordinateType = double]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:115:16, inlined from 'std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = OpenMS::DPosition<1>]' at /usr/include/c++/13/bits/move.h:197:11, inlined from 'void std::pair<_T1, _T2>::swap(std::pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:211:6, inlined from 'typename std::enable_if, std::__is_swappable<_T2> >::value>::type std::swap(pair<_T1, _T2>&, pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:881:15, inlined from 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algobase.h:185:11, inlined from '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algo.h:1354:19: /usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' forming offset 8 is out of the bounds [0, 8] of object '__tmp' with type 'OpenMS::DPosition<1>' [-Warray-bounds=] 437 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:36, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43: /usr/include/c++/13/bits/move.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]': /usr/include/c++/13/bits/move.h:197:11: note: '__tmp' declared here 197 | _Tp __tmp = _GLIBCXX_MOVE(__a); | ^~~~~ In static member function 'static void std::__copy_move::__assign_one(_Tp*, _Up*) [with _Tp = double; _Up = const double]', inlined from 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const double; _Up = double; bool _IsMove = false]' at /usr/include/c++/13/bits/stl_algobase.h:440:20, inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42, inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31, inlined from '_OI std::copy(_II, _II, _OI) [with _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7, inlined from 'OpenMS::DPosition& OpenMS::DPosition::operator=(const OpenMS::DPosition&) [with unsigned int D = 1; TCoordinateType = double]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:131:16, inlined from 'std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = OpenMS::DPosition<1>]' at /usr/include/c++/13/bits/move.h:199:11, inlined from 'void std::pair<_T1, _T2>::swap(std::pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:211:6, inlined from 'typename std::enable_if, std::__is_swappable<_T2> >::value>::type std::swap(pair<_T1, _T2>&, pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:881:15, inlined from 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algobase.h:185:11, inlined from '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algo.h:1354:19: /usr/include/c++/13/bits/stl_algobase.h:398:17: warning: '__tmp.OpenMS::DPosition<1, double>::coordinate_[0]' may be used uninitialized [-Wmaybe-uninitialized] 398 | { *__to = *__from; } | ~~~~~~^~~~~~~~~ /usr/include/c++/13/bits/move.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]': /usr/include/c++/13/bits/move.h:197:11: note: '__tmp' declared here 197 | _Tp __tmp = _GLIBCXX_MOVE(__a); | ^~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/OnDiscMSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/OnDiscMSExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/INTERFACES/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak2D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak2D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/PeakIndex.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/RangeManager.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/RichPeak2D.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/StandardTypes.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSChromatogram.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSChromatogram.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramTools.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramTools.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/SpectrumHelper.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/AASequence.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/CrossLinksDB.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DecoyGenerator.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Element.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Element.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ElementDB.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ElementDB.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinition.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationsDB.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NASequence.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:72:35: note: by 'OpenMS::NucleicAcidSpectrumGenerator& OpenMS::NucleicAcidSpectrumGenerator::operator=(const OpenMS::NucleicAcidSpectrumGenerator&)' 72 | NucleicAcidSpectrumGenerator& operator=(const NucleicAcidSpectrumGenerator& source); | ^~~~~~~~ [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Residue.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ResidueDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ResidueModification.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Ribonucleotide.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:79:25: note: by 'OpenMS::SpectrumAnnotator& OpenMS::SpectrumAnnotator::operator=(const OpenMS::SpectrumAnnotator&)' 79 | SpectrumAnnotator & operator=(const SpectrumAnnotator & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataArrays.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:105:46: note: by 'OpenMS::SvmTheoreticalSpectrumGeneratorTrainer& OpenMS::SvmTheoreticalSpectrumGeneratorTrainer::operator=(const OpenMS::SvmTheoreticalSpectrumGeneratorTrainer&)' 105 | SvmTheoreticalSpectrumGeneratorTrainer & operator=(const SvmTheoreticalSpectrumGeneratorTrainer & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp: In member function 'void OpenMS::SvmTheoreticalSpectrumGeneratorTrainer::trainModel(const OpenMS::PeakMap&, const std::vector&, OpenMS::String, OpenMS::Int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:797:28: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 797 | std::random_shuffle(training_data_by_class[0].begin(), training_data_by_class[0].end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:798:28: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 798 | std::random_shuffle(training_data_by_class[1].begin(), training_data_by_class[1].end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Tagger.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/WeightWrapper.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/boost/assert/source_location.hpp:15, from /usr/include/boost/exception/exception.hpp:9, from /usr/include/boost/throw_exception.hpp:21, from /usr/include/boost/polymorphic_cast.hpp:79, from /usr/include/boost/cast.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Helpers.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp: In member function 'void OpenMS::Internal::MzMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:94:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 94 | options_ = opt; | ^~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:50: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/13/bits/alloc_traits.h:538:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; allocator_type = std::allocator]' /usr/include/c++/13/bits/stl_vector.h:1283:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolExternalDetails]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:194:39: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ In file included from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:37: /usr/include/c++/13/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription]': /usr/include/c++/13/bits/alloc_traits.h:538:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription; allocator_type = std::allocator]' /usr/include/c++/13/bits/stl_vector.h:1283:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolDescription]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:200:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ /usr/include/c++/13/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Base64.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2Ifstream.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp: In member function 'virtual XMLSize_t OpenMS::Bzip2InputStream::readBytes(XMLByte*, XMLSize_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp:73:71: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 73 | XMLSize_t actual_read = (XMLSize_t) bzip2_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CachedMzML.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CachedMzML.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CachedMzML.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ChromeleonFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ChromeleonFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CompressedInputSource.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CVMappingFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ConsensusXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ConsensusXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ControlledVocabulary.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CsvFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTA2DFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTAFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTAFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/EDTAFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp: In member function 'void OpenMS::EDTAFile::load(const OpenMS::String&, OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:162:43: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 162 | consensus_map.getColumnHeaders()[0] = desc; | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:282:45: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 282 | consensus_map.getColumnHeaders()[i] = fd; | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ExperimentalDesignFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ExperimentalDesignFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FASTAFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:61:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 61 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:51: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:504:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 504 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'bool OpenMS::FileHandler::loadExperiment(const OpenMS::String&, OpenMS::PeakMap&, OpenMS::FileTypes::Type, OpenMS::ProgressLogger::LogType, bool, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:599:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 599 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:609:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 609 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:619:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 619 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:628:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 628 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::storeExperiment(const OpenMS::String&, const OpenMS::PeakMap&, OpenMS::ProgressLogger::LogType)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:698:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 698 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:707:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 707 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:725:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 725 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:743:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 743 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileTypes.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipIfstream.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp: In member function 'virtual XMLSize_t OpenMS::GzipInputStream::readBytes(XMLByte*, XMLSize_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp:74:70: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 74 | XMLSize_t actual_read = (XMLSize_t) gzip_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HDF5Connector.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IdXMLFile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp: In member function 'void OpenMS::IndexedMzMLFileLoader::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:60:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 60 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectInfile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/InspectOutfile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp:41: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/KroenikFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/KroenikFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/KroenikFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/KroenikFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/LibSVMEncoder.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MS2File.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSNumpressCoder.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPFile.h:72:15: note: by 'OpenMS::MSPFile& OpenMS::MSPFile::operator=(const OpenMS::MSPFile&)' 72 | MSPFile & operator=(const MSPFile & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPGenericFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPGenericFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:67:23: note: by 'OpenMS::MSPGenericFile& OpenMS::MSPGenericFile::operator=(const OpenMS::MSPGenericFile&)' 67 | class OPENMS_DLLAPI MSPGenericFile : | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSstatsFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSstatsFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSstatsFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotInfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotInfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotInfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:61:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 61 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:134:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 134 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::login()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:182:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 182 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47, from /usr/include/i386-linux-gnu/qt5/QtCore/QObject:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:38: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:188:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 188 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:194:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 194 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:199:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 199 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:204:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 204 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:209:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 209 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:214:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 214 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:219:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 219 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:224:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 224 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:229:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 229 | loginbytes.append("--" + boundary + "--\r\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::execQuery()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:355:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 355 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:360:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 360 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MsInspectFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MsInspectFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/File.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp: In member function 'void OpenMS::MzDataFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:65:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 65 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzIdentMLFile.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp: In member function 'void OpenMS::MzMLFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:72:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 72 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SVOutStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp: In member function 'void OpenMS::MzXMLFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:64:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 64 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OMSSACSVFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OMSSAXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OSWFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ParamXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PTMXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PeakTypeEstimator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PeakTypeEstimator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepNovoInfile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepNovoOutfile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFileMascot.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PercolatorOutfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PercolatorOutfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ProtXMLFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/QcMLFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SequestInfile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SequestOutfile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SpecArrayFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SpecArrayFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqliteConnector.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqMassFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SqMassFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqMassFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SwathFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SVOutStream.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TextFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolDescription; _Args = {OpenMS::Internal::ToolDescription&}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' /usr/include/c++/13/bits/vector.tcc:257:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tempbuf.h:61, from /usr/include/c++/13/bits/stl_algo.h:69, from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:37: /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/13/bits/stl_vector.h:603:31: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' /usr/include/c++/13/bits/vector.tcc:257:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TraMLFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TransformationXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/UnimodXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMassFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMassFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMassFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMassFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:34: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XTandemInfile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XTandemXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ZlibCompression.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:84:31: note: by 'OpenMS::IsobaricChannelExtractor& OpenMS::IsobaricChannelExtractor::operator=(const OpenMS::IsobaricChannelExtractor&)' 84 | IsobaricChannelExtractor& operator=(const IsobaricChannelExtractor& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp: In member function 'void OpenMS::IsobaricChannelExtractor::registerChannelsInOutputMap_(OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:751:49: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 751 | consensus_map.getColumnHeaders()[index] = channel_as_map; | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:66:25: note: by 'OpenMS::IsobaricQuantifier& OpenMS::IsobaricQuantifier::operator=(const OpenMS::IsobaricQuantifier&)' 66 | IsobaricQuantifier& operator=(const IsobaricQuantifier& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:69:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 69 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:69:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 69 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:79:38: note: by 'OpenMS::QuantitativeExperimentalDesign& OpenMS::QuantitativeExperimentalDesign::operator=(const OpenMS::QuantitativeExperimentalDesign&)' 79 | QuantitativeExperimentalDesign & operator=(const QuantitativeExperimentalDesign &); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:62:40: note: by 'OpenMS::TMTSixteenPlexQuantitationMethod& OpenMS::TMTSixteenPlexQuantitationMethod::operator=(const OpenMS::TMTSixteenPlexQuantitationMethod&)' 62 | TMTSixteenPlexQuantitationMethod & operator=(const TMTSixteenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:51: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:84:23: note: by 'OpenMS::AbsoluteQuantitation& OpenMS::AbsoluteQuantitation::operator=(const OpenMS::AbsoluteQuantitation&)' 84 | class OPENMS_DLLAPI AbsoluteQuantitation : | ^~~~~~~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:65:23: note: by 'OpenMS::SimpleSVM& OpenMS::SimpleSVM::operator=(const OpenMS::SimpleSVM&)' 65 | class OPENMS_DLLAPI SimpleSVM : | ^~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp: In static member function 'static void OpenMS::SVMWrapper::createRandomPartitions(svm_problem*, OpenMS::Size, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:611:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 611 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp: In static member function 'static void OpenMS::SVMWrapper::createRandomPartitions(const OpenMS::SVMData&, OpenMS::Size, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:679:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 679 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp: In member function 'void OpenMS::FeatureGroupingAlgorithm::transferSubelements(const std::vector&, OpenMS::ConsensusMap&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:93:52: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 93 | out.getColumnHeaders()[counter] = desc_it->second; | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:110:42: note: by 'OpenMS::MapAlignmentAlgorithmPoseClustering& OpenMS::MapAlignmentAlgorithmPoseClustering::operator=(const OpenMS::MapAlignmentAlgorithmPoseClustering&)' 110 | MapAlignmentAlgorithmPoseClustering& operator=(const MapAlignmentAlgorithmPoseClustering&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:431:18: warning: 'virtual void OpenMS::TOPPBase::registerOptionsAndFlags_()' was hidden [-Woverloaded-virtual=] 431 | virtual void registerOptionsAndFlags_() = 0; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:123:8: note: by 'void OpenMS::TOPPMapAlignerBase::registerOptionsAndFlags_(const OpenMS::String&, ReferenceParameterKind)' 123 | void registerOptionsAndFlags_(const String& file_formats, | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:174:38: note: by 'OpenMS::MapAlignmentAlgorithmTreeGuided& OpenMS::MapAlignmentAlgorithmTreeGuided::operator=(const OpenMS::MapAlignmentAlgorithmTreeGuided&)' 174 | MapAlignmentAlgorithmTreeGuided& operator=(const MapAlignmentAlgorithmTreeGuided&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:72:46: note: by 'OpenMS::MapAlignmentAlgorithmSpectrumAlignment& OpenMS::MapAlignmentAlgorithmSpectrumAlignment::operator=(const OpenMS::MapAlignmentAlgorithmSpectrumAlignment&)' 72 | MapAlignmentAlgorithmSpectrumAlignment & operator=(const MapAlignmentAlgorithmSpectrumAlignment &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:64:23: note: by 'OpenMS::PoseClusteringShiftSuperimposer& OpenMS::PoseClusteringShiftSuperimposer::operator=(const OpenMS::PoseClusteringShiftSuperimposer&)' 64 | class OPENMS_DLLAPI PoseClusteringShiftSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp: In member function 'OpenMS::TransformationDescription::TransformationStatistics OpenMS::TransformationDescription::getStatistics() const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:219:31: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 219 | if (data_.empty()) return s; | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:260:12: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 260 | return s; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:82:27: note: by 'OpenMS::FeatureDeconvolution& OpenMS::FeatureDeconvolution::operator=(const OpenMS::FeatureDeconvolution&)' 82 | FeatureDeconvolution& operator=(const FeatureDeconvolution& source); | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:82:37: note: by 'OpenMS::MetaboliteFeatureDeconvolution& OpenMS::MetaboliteFeatureDeconvolution::operator=(const OpenMS::MetaboliteFeatureDeconvolution&)' 82 | MetaboliteFeatureDeconvolution& operator=(const MetaboliteFeatureDeconvolution& source); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:34: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:258:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 258 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:70:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 70 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:58:23: note: by 'OpenMS::BasicProteinInferenceAlgorithm::operator=' 58 | class OPENMS_DLLAPI BasicProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:75:23: note: by 'OpenMS::BayesianProteinInferenceAlgorithm& OpenMS::BayesianProteinInferenceAlgorithm::operator=(const OpenMS::BayesianProteinInferenceAlgorithm&)' 75 | class OPENMS_DLLAPI BayesianProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:47:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 47 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp: In member function 'long unsigned int OpenMS::BayesianProteinInferenceAlgorithm::GraphInferenceFunctor::operator()(OpenMS::Internal::IDBoostGraph::Graph&, unsigned int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Tensor.hpp:8, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/naive_convolve.hpp:4, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/p_convolve.hpp:11, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/PMF.hpp:5, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/LabeledPMF.hpp:7, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/InferenceEngine.hpp:4, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/BeliefPropagationInferenceEngine.hpp:4, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/evergreen.hpp:56, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: note: candidate 2: 'operator[](long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: note: candidate 2: 'operator[](long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp: In member function 'long unsigned int OpenMS::BayesianProteinInferenceAlgorithm::ExtendedGraphInferenceFunctor::operator()(OpenMS::Internal::IDBoostGraph::Graph&, unsigned int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: note: candidate 2: 'operator[](long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: note: candidate 2: 'operator[](long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 449 | posterior = pmf.table()[1 - pmf.first_support()[0]]; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 449 | posterior = pmf.table()[1 - pmf.first_support()[0]]; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: note: candidate 2: 'operator[](long int* const, int)' (built-in) 449 | posterior = pmf.table()[1 - pmf.first_support()[0]]; | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ In file included from /usr/include/string.h:535, from /usr/include/c++/13/cstring:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:42: In function 'void* memcpy(void*, const void*, size_t)', inlined from 'void evergreen::lsb_to_msb_with_existing_buffer(T*, T*) [with T = cpx; unsigned char NUM_BITS = 27]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/RecursiveShuffle.hpp:66:9: /usr/include/i386-linux-gnu/bits/string_fortified.h:29:33: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' pointer overflow between offset 1073741824 and size 1073741824 [-Warray-bounds=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h:60:34: note: by 'OpenMS::ConsensusIDAlgorithmAverage& OpenMS::ConsensusIDAlgorithmAverage::operator=(const OpenMS::ConsensusIDAlgorithmAverage&)' 60 | ConsensusIDAlgorithmAverage& operator=(const ConsensusIDAlgorithmAverage&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:60:31: note: by 'OpenMS::ConsensusIDAlgorithmBest& OpenMS::ConsensusIDAlgorithmBest::operator=(const OpenMS::ConsensusIDAlgorithmBest&)' 60 | ConsensusIDAlgorithmBest& operator=(const ConsensusIDAlgorithmBest&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h:66:34: note: by 'OpenMS::ConsensusIDAlgorithmPEPIons& OpenMS::ConsensusIDAlgorithmPEPIons::operator=(const OpenMS::ConsensusIDAlgorithmPEPIons&)' 66 | ConsensusIDAlgorithmPEPIons& operator=(const ConsensusIDAlgorithmPEPIons&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:181:36: note: by 'OpenMS::ConsensusIDAlgorithmPEPMatrix& OpenMS::ConsensusIDAlgorithmPEPMatrix::operator=(const OpenMS::ConsensusIDAlgorithmPEPMatrix&)' 181 | ConsensusIDAlgorithmPEPMatrix& operator=(const ConsensusIDAlgorithmPEPMatrix&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h:66:32: note: by 'OpenMS::ConsensusIDAlgorithmRanks& OpenMS::ConsensusIDAlgorithmRanks::operator=(const OpenMS::ConsensusIDAlgorithmRanks&)' 66 | ConsensusIDAlgorithmRanks& operator=(const ConsensusIDAlgorithmRanks&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h:60:32: note: by 'OpenMS::ConsensusIDAlgorithmWorst& OpenMS::ConsensusIDAlgorithmWorst::operator=(const OpenMS::ConsensusIDAlgorithmWorst&)' 60 | ConsensusIDAlgorithmWorst& operator=(const ConsensusIDAlgorithmWorst&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:63:23: note: by 'OpenMS::ConsensusMapMergerAlgorithm::operator=' 63 | class OPENMS_DLLAPI ConsensusMapMergerAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:73:25: note: by 'OpenMS::FIAMSDataProcessor& OpenMS::FIAMSDataProcessor::operator=(const OpenMS::FIAMSDataProcessor&)' 73 | FIAMSDataProcessor& operator=(const FIAMSDataProcessor& fdp) = default; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:258:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 258 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:73:25: note: by 'OpenMS::FIAMSDataProcessor& OpenMS::FIAMSDataProcessor::operator=(const OpenMS::FIAMSDataProcessor&)' 73 | FIAMSDataProcessor& operator=(const FIAMSDataProcessor& fdp) = default; | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/stdexcept:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/evergreen.hpp:13, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:40: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMapper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:61:23: note: by 'OpenMS::IDMergerAlgorithm::operator=' 61 | class OPENMS_DLLAPI IDMergerAlgorithm: | ^~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDRipper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDRipper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:83:16: note: by 'OpenMS::IDRipper& OpenMS::IDRipper::operator=(const OpenMS::IDRipper&)' 83 | IDRipper & operator=(const IDRipper & rhs); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h:72:26: note: by 'OpenMS::IDDecoyProbability& OpenMS::IDDecoyProbability::operator=(const OpenMS::IDDecoyProbability&)' 72 | IDDecoyProbability & operator=(const IDDecoyProbability & rhs); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:47:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 47 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:150:23: note: by 'OpenMS::MetaboliteSpectralMatching& OpenMS::MetaboliteSpectralMatching::operator=(const OpenMS::MetaboliteSpectralMatching&)' 150 | class OPENMS_DLLAPI MetaboliteSpectralMatching : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h:89:31: note: by 'OpenMS::ProtonDistributionModel& OpenMS::ProtonDistributionModel::operator=(const OpenMS::ProtonDistributionModel&)' 89 | ProtonDistributionModel & operator=(const ProtonDistributionModel & pdm); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:46:21: note: by 'OpenMS::SimpleSearchEngineAlgorithm::operator=' 46 | class OPENMS_DLLAPI SimpleSearchEngineAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:55: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:56: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:57: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:58: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:70: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp: In member function 'OpenMS::SimpleSearchEngineAlgorithm::ExitCodes OpenMS::SimpleSearchEngineAlgorithm::search(const OpenMS::String&, const OpenMS::String&, std::vector&, std::vector&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:411:22: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 411 | f.getOptions() = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:60: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:495:26: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 495 | std::random_shuffle(fasta_db.begin(), fasta_db.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:602:27: warning: implicitly-declared 'constexpr OpenMS::StringView& OpenMS::StringView::operator=(const OpenMS::StringView&)' is deprecated [-Wdeprecated-copy] 602 | ah.sequence = c; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:504:5: note: because 'OpenMS::StringView' has user-provided 'OpenMS::StringView::StringView(const OpenMS::StringView&)' 504 | StringView(const StringView& s) : begin_(s.begin_), size_(s.size_) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h: In instantiation of 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/13/bits/stl_algo.h:1638:19: required from 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' /usr/include/c++/13/bits/stl_algo.h:1910:25: required from 'void std::__partial_sort(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' /usr/include/c++/13/bits/stl_algo.h:4751:26: required from 'void std::partial_sort(_RAIter, _RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_&, const OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_&)]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:258:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:72:12: warning: implicitly-declared 'constexpr OpenMS::StringView& OpenMS::StringView::operator=(const OpenMS::StringView&)' is deprecated [-Wdeprecated-copy] 72 | struct AnnotatedHit_ | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:504:5: note: because 'OpenMS::StringView' has user-provided 'OpenMS::StringView::StringView(const OpenMS::StringView&)' 504 | StringView(const StringView& s) : begin_(s.begin_), size_(s.size_) | ^~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algo.h:61: /usr/include/c++/13/bits/stl_heap.h:263:17: note: synthesized method 'OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_& OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_::operator=(OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_&&)' first required here 263 | *__result = _GLIBCXX_MOVE(*__first); | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/bits/stl_tree.h:64: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:46:23: note: by 'OpenMS::SiriusAdapterAlgorithm::operator=' 46 | class OPENMS_DLLAPI SiriusAdapterAlgorithm : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:118:24: note: by 'OpenMS::DeNovoIonScoring& OpenMS::DeNovoIonScoring::operator=(const OpenMS::DeNovoIonScoring&)' 118 | DeNovoIonScoring & operator=(const DeNovoIonScoring & rhs); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:118:24: note: by 'OpenMS::DeNovoIonScoring& OpenMS::DeNovoIonScoring::operator=(const OpenMS::DeNovoIonScoring&)' 118 | DeNovoIonScoring & operator=(const DeNovoIonScoring & rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:70:23: note: by 'OpenMS::DeNovoAlgorithm& OpenMS::DeNovoAlgorithm::operator=(const OpenMS::DeNovoAlgorithm&)' 70 | DeNovoAlgorithm & operator=(const DeNovoAlgorithm & rhs); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h:70:25: note: by 'OpenMS::DeNovoPostScoring& OpenMS::DeNovoPostScoring::operator=(const OpenMS::DeNovoPostScoring&)' 70 | DeNovoPostScoring & operator=(const DeNovoPostScoring & rhs); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h:70:28: note: by 'OpenMS::DeNovoIdentification& OpenMS::DeNovoIdentification::operator=(const OpenMS::DeNovoIdentification&)' 70 | DeNovoIdentification & operator=(const DeNovoIdentification & rhs); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:73:33: note: by 'OpenMS::CompNovoIdentificationCID& OpenMS::CompNovoIdentificationCID::operator=(const OpenMS::CompNovoIdentificationCID&)' 73 | CompNovoIdentificationCID & operator=(const CompNovoIdentificationCID & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:84:29: note: by 'OpenMS::CompNovoIonScoringCID& OpenMS::CompNovoIonScoringCID::operator=(const OpenMS::CompNovoIonScoringCID&)' 84 | CompNovoIonScoringCID & operator=(const CompNovoIonScoringCID & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:84:26: note: by 'OpenMS::CompNovoIonScoring& OpenMS::CompNovoIonScoring::operator=(const OpenMS::CompNovoIonScoring&)' 84 | CompNovoIonScoring & operator=(const CompNovoIonScoring & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:73:30: note: by 'OpenMS::CompNovoIdentification& OpenMS::CompNovoIdentification::operator=(const OpenMS::CompNovoIdentification&)' 73 | CompNovoIdentification & operator=(const CompNovoIdentification & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:84:26: note: by 'OpenMS::CompNovoIonScoring& OpenMS::CompNovoIonScoring::operator=(const OpenMS::CompNovoIonScoring&)' 84 | CompNovoIonScoring & operator=(const CompNovoIonScoring & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:84:29: note: by 'OpenMS::CompNovoIonScoringCID& OpenMS::CompNovoIonScoringCID::operator=(const OpenMS::CompNovoIonScoringCID&)' 84 | CompNovoIonScoringCID & operator=(const CompNovoIonScoringCID & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h:78:28: note: by 'OpenMS::MRMFragmentSelection& OpenMS::MRMFragmentSelection::operator=(const OpenMS::MRMFragmentSelection&)' 78 | MRMFragmentSelection & operator=(const MRMFragmentSelection & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:95:18: note: by 'OpenMS::MRMMapping& OpenMS::MRMMapping::operator=(const OpenMS::MRMMapping&)' 95 | MRMMapping & operator=(const MRMMapping & rhs); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:94:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 94 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:105:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 105 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:52:23: note: by 'OpenMS::PrecursorIonSelection& OpenMS::PrecursorIonSelection::operator=(const OpenMS::PrecursorIonSelection&)' 52 | class OPENMS_DLLAPI PrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:52:23: note: by 'OpenMS::InclusionExclusionList::operator=' 52 | class OPENMS_DLLAPI InclusionExclusionList : | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:70:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 70 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:113:23: note: by 'OpenMS::OpenPepXLAlgorithm& OpenMS::OpenPepXLAlgorithm::operator=(const OpenMS::OpenPepXLAlgorithm&)' 113 | class OPENMS_DLLAPI OpenPepXLAlgorithm : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:50: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/bits/stl_tree.h:64: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:103:23: note: by 'OpenMS::OpenPepXLLFAlgorithm& OpenMS::OpenPepXLLFAlgorithm::operator=(const OpenMS::OpenPepXLLFAlgorithm&)' 103 | class OPENMS_DLLAPI OpenPepXLLFAlgorithm : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/bits/stl_tree.h:64: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:65:23: note: by 'OpenMS::XFDRAlgorithm& OpenMS::XFDRAlgorithm::operator=(const OpenMS::XFDRAlgorithm&)' 65 | class OPENMS_DLLAPI XFDRAlgorithm : | ^~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:76:16: note: by 'OpenMS::BernNorm& OpenMS::BernNorm::operator=(const OpenMS::BernNorm&)' 76 | BernNorm & operator=(const BernNorm & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:71:24: note: by 'OpenMS::ComplementFilter& OpenMS::ComplementFilter::operator=(const OpenMS::ComplementFilter&)' 71 | ComplementFilter & operator=(const ComplementFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h:71:24: note: by 'OpenMS::ComplementMarker& OpenMS::ComplementMarker::operator=(const OpenMS::ComplementMarker&)' 71 | ComplementMarker & operator=(const ComplementMarker & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:71:24: note: by 'OpenMS::ComplementFilter& OpenMS::ComplementFilter::operator=(const OpenMS::ComplementFilter&)' 71 | ComplementFilter & operator=(const ComplementFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:73:22: note: by 'OpenMS::GoodDiffFilter& OpenMS::GoodDiffFilter::operator=(const OpenMS::GoodDiffFilter&)' 73 | GoodDiffFilter & operator=(const GoodDiffFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:73:30: note: by 'OpenMS::IntensityBalanceFilter& OpenMS::IntensityBalanceFilter::operator=(const OpenMS::IntensityBalanceFilter&)' 73 | IntensityBalanceFilter & operator=(const IntensityBalanceFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:71:29: note: by 'OpenMS::NeutralLossDiffFilter& OpenMS::NeutralLossDiffFilter::operator=(const OpenMS::NeutralLossDiffFilter&)' 71 | NeutralLossDiffFilter & operator=(const NeutralLossDiffFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:70:25: note: by 'OpenMS::IsotopeDiffFilter& OpenMS::IsotopeDiffFilter::operator=(const OpenMS::IsotopeDiffFilter&)' 70 | IsotopeDiffFilter & operator=(const IsotopeDiffFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:73:22: note: by 'OpenMS::GoodDiffFilter& OpenMS::GoodDiffFilter::operator=(const OpenMS::GoodDiffFilter&)' 73 | GoodDiffFilter & operator=(const GoodDiffFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:73:30: note: by 'OpenMS::IntensityBalanceFilter& OpenMS::IntensityBalanceFilter::operator=(const OpenMS::IntensityBalanceFilter&)' 73 | IntensityBalanceFilter & operator=(const IntensityBalanceFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:70:25: note: by 'OpenMS::IsotopeDiffFilter& OpenMS::IsotopeDiffFilter::operator=(const OpenMS::IsotopeDiffFilter&)' 70 | IsotopeDiffFilter & operator=(const IsotopeDiffFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:77:21: note: by 'OpenMS::IsotopeMarker& OpenMS::IsotopeMarker::operator=(const OpenMS::IsotopeMarker&)' 77 | IsotopeMarker & operator=(const IsotopeMarker & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:69:19: note: by 'OpenMS::MarkerMower& OpenMS::MarkerMower::operator=(const OpenMS::MarkerMower&)' 69 | MarkerMower & operator=(const MarkerMower & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:71:29: note: by 'OpenMS::NeutralLossDiffFilter& OpenMS::NeutralLossDiffFilter::operator=(const OpenMS::NeutralLossDiffFilter&)' 71 | NeutralLossDiffFilter & operator=(const NeutralLossDiffFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h:71:25: note: by 'OpenMS::NeutralLossMarker& OpenMS::NeutralLossMarker::operator=(const OpenMS::NeutralLossMarker&)' 71 | NeutralLossMarker & operator=(const NeutralLossMarker & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:74:22: note: by 'OpenMS::ParentPeakMower& OpenMS::ParentPeakMower::operator=(const OpenMS::ParentPeakMower&)' 74 | ParentPeakMower& operator=(const ParentPeakMower& source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:66:14: note: by 'OpenMS::Scaler& OpenMS::Scaler::operator=(const OpenMS::Scaler&)' 66 | Scaler & operator=(const Scaler & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:76:23: note: by 'OpenMS::ElutionPeakDetection& OpenMS::ElutionPeakDetection::operator=(const OpenMS::ElutionPeakDetection&)' 76 | class OPENMS_DLLAPI ElutionPeakDetection : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:177:23: note: by 'OpenMS::FeatureFindingMetabo& OpenMS::FeatureFindingMetabo::operator=(const OpenMS::FeatureFindingMetabo&)' 177 | class OPENMS_DLLAPI FeatureFindingMetabo : | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:72:25: note: by 'OpenMS::MassTraceDetection& OpenMS::MassTraceDetection::operator=(const OpenMS::MassTraceDetection&)' 72 | class OPENMS_DLLAPI MassTraceDetection : | ^~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In static member function 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int))': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:192:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 192 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In static member function 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int))': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:38: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:192:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 192 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In instantiation of 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int)) [with TModelType = OpenMS::Math::RansacModelLinear; size_t = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:105:22: required from 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, const OpenMS::Math::RANSACParam&) [with TModelType = OpenMS::Math::RansacModelLinear]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp:205:61: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In instantiation of 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int)) [with TModelType = OpenMS::Math::RansacModelQuadratic; size_t = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:105:22: required from 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, const OpenMS::Math::RANSACParam&) [with TModelType = OpenMS::Math::RansacModelQuadratic]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp:250:64: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:66:23: note: by 'OpenMS::TOFCalibration& OpenMS::TOFCalibration::operator=(const OpenMS::TOFCalibration&)' 66 | class OPENMS_DLLAPI TOFCalibration : | ^~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h:60:23: note: by 'OpenMS::LowessSmoothing& OpenMS::LowessSmoothing::operator=(const OpenMS::LowessSmoothing&)' 60 | class OPENMS_DLLAPI LowessSmoothing : | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative<>' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:40:41: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative<>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:40:41: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian<>' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:40:34: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian<>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:40:34: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static std::map > OpenMS::IDFilter::extractUnassignedProteins(OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:274:54: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 274 | moveMatchingItems(prot_it->getHits(), std::not1(acc_filter), target.first->second); | ~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In lambda function: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:384:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 384 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::updateProteinReferences(std::vector&, const std::vector&, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:432:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 432 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::removeUngroupedProteins(const std::vector&, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:498:59: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 498 | std::remove_if(hits.begin(), hits.end(), std::not1(HasMatchingAccessionUnordered(valid_accessions))), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::moveMatchingItems(Container&, const Predicate&, Container&) [with Container = std::vector; Predicate = std::unary_negate >]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:274:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:550:73: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = unary_negate >]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 550 | auto part = std::partition(items.begin(), items.end(), std::not1(pred)); | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccessionUnordered]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:311:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinPeptideLength]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:569:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinPeptideLength]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinCharge]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:592:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinCharge]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasRTInRange]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:611:22: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasRTInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMZInRange]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:619:22: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMZInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasLowMZError]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:630:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasLowMZError]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:647:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMaxMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:650:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMaxMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingModification]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:684:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingModification]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingSequence]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:714:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingSequence]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:67:26: note: by 'virtual OpenMS::GaussModel& OpenMS::GaussModel::operator=(const OpenMS::GaussModel&)' 67 | virtual GaussModel & operator=(const GaussModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:67:28: note: by 'virtual OpenMS::BiGaussModel& OpenMS::BiGaussModel::operator=(const OpenMS::BiGaussModel&)' 67 | virtual BiGaussModel & operator=(const BiGaussModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:75:36: note: by 'virtual OpenMS::ExtendedIsotopeModel& OpenMS::ExtendedIsotopeModel::operator=(const OpenMS::ExtendedIsotopeModel&)' 75 | virtual ExtendedIsotopeModel & operator=(const ExtendedIsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:64:31: note: by 'virtual OpenMS::BiGaussFitter1D& OpenMS::BiGaussFitter1D::operator=(const OpenMS::BiGaussFitter1D&)' 64 | virtual BiGaussFitter1D & operator=(const BiGaussFitter1D & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:67:28: note: by 'virtual OpenMS::BiGaussModel& OpenMS::BiGaussModel::operator=(const OpenMS::BiGaussModel&)' 67 | virtual BiGaussModel & operator=(const BiGaussModel & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:49:23: note: by 'OpenMS::ElutionModelFitter& OpenMS::ElutionModelFitter::operator=(const OpenMS::ElutionModelFitter&)' 49 | class OPENMS_DLLAPI ElutionModelFitter : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:61:39: note: by 'virtual OpenMS::ExtendedIsotopeFitter1D& OpenMS::ExtendedIsotopeFitter1D::operator=(const OpenMS::ExtendedIsotopeFitter1D&)' 61 | virtual ExtendedIsotopeFitter1D & operator=(const ExtendedIsotopeFitter1D & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:75:36: note: by 'virtual OpenMS::ExtendedIsotopeModel& OpenMS::ExtendedIsotopeModel::operator=(const OpenMS::ExtendedIsotopeModel&)' 75 | virtual ExtendedIsotopeModel & operator=(const ExtendedIsotopeModel & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmMRM::operator=' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmMRM : | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:309:35: note: by 'OpenMS::FeatureFinderAlgorithmPicked& OpenMS::FeatureFinderAlgorithmPicked::operator=(const OpenMS::FeatureFinderAlgorithmPicked&)' 309 | FeatureFinderAlgorithmPicked& operator=(const FeatureFinderAlgorithmPicked&); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h: In instantiation of 'void OpenMS::IsotopeWaveletTransform::identifyCharge(const OpenMS::MSSpectrum&, const OpenMS::MSSpectrum&, OpenMS::UInt, OpenMS::UInt, double, bool) [with PeakType = OpenMS::Peak1D; OpenMS::UInt = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:224:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h:783:15: warning: implicitly-declared 'OpenMS::ConstRefVector::ConstRefVectorIterator& OpenMS::ConstRefVector::ConstRefVectorIterator::operator=(const OpenMS::ConstRefVector::ConstRefVectorIterator&)' is deprecated [-Wdeprecated-copy] 783 | for (iter = c_sorted_candidate.end() - 1; iter != c_sorted_candidate.begin(); --iter) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h:260:7: note: because 'OpenMS::ConstRefVector::ConstRefVectorIterator' has user-provided 'OpenMS::ConstRefVector::ConstRefVectorIterator::ConstRefVectorIterator(const OpenMS::ConstRefVector::ConstRefVectorIterator&) [with ValueT = const OpenMS::Peak1D; ContainerT = OpenMS::MSSpectrum]' 260 | ConstRefVectorIterator(const ConstRefVectorIterator& it) : | ^~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmMRM::operator=' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmMRM : | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:77:55: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:77:55: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:309:35: note: by 'OpenMS::FeatureFinderAlgorithmPicked& OpenMS::FeatureFinderAlgorithmPicked::operator=(const OpenMS::FeatureFinderAlgorithmPicked&)' 309 | FeatureFinderAlgorithmPicked& operator=(const FeatureFinderAlgorithmPicked&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderIdentificationAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderIdentificationAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:49:23: note: by 'OpenMS::ElutionModelFitter& OpenMS::ElutionModelFitter::operator=(const OpenMS::ElutionModelFitter&)' 49 | class OPENMS_DLLAPI ElutionModelFitter : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:65:23: note: by 'OpenMS::SimpleSVM& OpenMS::SimpleSVM::operator=(const OpenMS::SimpleSVM&)' 65 | class OPENMS_DLLAPI SimpleSVM : | ^~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp: In member function 'void OpenMS::FeatureFinderIdentificationAlgorithm::getRandomSample_(std::map&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:1309:19: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 1309 | random_shuffle(selection.begin(), selection.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:44: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderMultiplexAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderMultiplexAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:60:23: note: by 'OpenMS::MultiplexDeltaMassesGenerator::operator=' 60 | class OPENMS_DLLAPI MultiplexDeltaMassesGenerator : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:62:29: note: by 'virtual OpenMS::GaussFitter1D& OpenMS::GaussFitter1D::operator=(const OpenMS::GaussFitter1D&)' 62 | virtual GaussFitter1D & operator=(const GaussFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:64:31: note: by 'virtual OpenMS::BiGaussFitter1D& OpenMS::BiGaussFitter1D::operator=(const OpenMS::BiGaussFitter1D&)' 64 | virtual BiGaussFitter1D & operator=(const BiGaussFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:61:31: note: by 'virtual OpenMS::IsotopeFitter1D& OpenMS::IsotopeFitter1D::operator=(const OpenMS::IsotopeFitter1D&)' 61 | virtual IsotopeFitter1D & operator=(const IsotopeFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:61:39: note: by 'virtual OpenMS::ExtendedIsotopeFitter1D& OpenMS::ExtendedIsotopeFitter1D::operator=(const OpenMS::ExtendedIsotopeFitter1D&)' 61 | virtual ExtendedIsotopeFitter1D & operator=(const ExtendedIsotopeFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:62:29: note: by 'virtual OpenMS::GaussFitter1D& OpenMS::GaussFitter1D::operator=(const OpenMS::GaussFitter1D&)' 62 | virtual GaussFitter1D & operator=(const GaussFitter1D & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:67:26: note: by 'virtual OpenMS::GaussModel& OpenMS::GaussModel::operator=(const OpenMS::GaussModel&)' 67 | virtual GaussModel & operator=(const GaussModel & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:61:31: note: by 'virtual OpenMS::IsotopeFitter1D& OpenMS::IsotopeFitter1D::operator=(const OpenMS::IsotopeFitter1D&)' 61 | virtual IsotopeFitter1D & operator=(const IsotopeFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/streambuf:43, from /usr/include/c++/13/bits/streambuf_iterator.h:35, from /usr/include/c++/13/iterator:66, from /usr/include/boost/iterator/iterator_traits.hpp:10, from /usr/include/boost/range/iterator_range_core.hpp:26, from /usr/include/boost/lexical_cast.hpp:48, from /usr/include/boost/math/tools/convert_from_string.hpp:17, from /usr/include/boost/math/constants/constants.hpp:14, from /usr/include/boost/math/distributions/cauchy.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:60:23: note: by 'OpenMS::MultiplexDeltaMassesGenerator::operator=' 60 | class OPENMS_DLLAPI MultiplexDeltaMassesGenerator : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/iomanip:42, from /usr/include/boost/math/policies/error_handling.hpp:12, from /usr/include/boost/math/special_functions/gamma.hpp:23, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h:40: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/iomanip:42, from /usr/include/boost/math/policies/error_handling.hpp:12, from /usr/include/boost/math/special_functions/acosh.hpp:20, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:103:23: note: by 'OpenMS::TwoDOptimization& OpenMS::TwoDOptimization::operator=(const OpenMS::TwoDOptimization&)' 103 | TwoDOptimization& operator=(const TwoDOptimization& opt); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:164:53: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:164:53: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:75:83: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:75:83: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:142:51: required from 'void OpenMS::PeakPickerHiRes::pick_(const ContainerType&, ContainerType&, std::vector&, bool) const [with ContainerType = OpenMS::MSChromatogram]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:119:10: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:142:51: required from 'void OpenMS::PeakPickerHiRes::pick_(const ContainerType&, ContainerType&, std::vector&, bool) const [with ContainerType = OpenMS::MSChromatogram]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:119:10: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:96:23: note: by 'OpenMS::PeakPickerIterative& OpenMS::PeakPickerIterative::operator=(const OpenMS::PeakPickerIterative&)' 96 | class OPENMS_DLLAPI PeakPickerIterative : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:212:20: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:212:20: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:48:23: note: by 'OpenMS::PeakPickerSH& OpenMS::PeakPickerSH::operator=(const OpenMS::PeakPickerSH&)' 48 | class OPENMS_DLLAPI PeakPickerSH : | ^~~~~~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:45: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:52: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:103:23: note: by 'OpenMS::TwoDOptimization& OpenMS::TwoDOptimization::operator=(const OpenMS::TwoDOptimization&)' 103 | TwoDOptimization& operator=(const TwoDOptimization& opt); | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:44: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:75:28: note: by 'OpenMS::BinnedSharedPeakCount& OpenMS::BinnedSharedPeakCount::operator=(const OpenMS::BinnedSharedPeakCount&)' 75 | BinnedSharedPeakCount& operator=(const BinnedSharedPeakCount& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:75:28: note: by 'OpenMS::BinnedSharedPeakCount& OpenMS::BinnedSharedPeakCount::operator=(const OpenMS::BinnedSharedPeakCount&)' 75 | BinnedSharedPeakCount& operator=(const BinnedSharedPeakCount& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:79:35: note: by 'OpenMS::BinnedSumAgreeingIntensities& OpenMS::BinnedSumAgreeingIntensities::operator=(const OpenMS::BinnedSumAgreeingIntensities&)' 79 | BinnedSumAgreeingIntensities& operator=(const BinnedSumAgreeingIntensities& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:79:35: note: by 'OpenMS::BinnedSumAgreeingIntensities& OpenMS::BinnedSumAgreeingIntensities::operator=(const OpenMS::BinnedSumAgreeingIntensities&)' 79 | BinnedSumAgreeingIntensities& operator=(const BinnedSumAgreeingIntensities& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:68:21: note: by 'OpenMS::PeakAlignment& OpenMS::PeakAlignment::operator=(const OpenMS::PeakAlignment&)' 68 | PeakAlignment & operator=(const PeakAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:80:27: note: by 'OpenMS::SpectrumCheapDPCorr& OpenMS::SpectrumCheapDPCorr::operator=(const OpenMS::SpectrumCheapDPCorr&)' 80 | SpectrumCheapDPCorr & operator=(const SpectrumCheapDPCorr & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:69:35: note: by 'OpenMS::SpectrumPrecursorComparator& OpenMS::SpectrumPrecursorComparator::operator=(const OpenMS::SpectrumPrecursorComparator&)' 69 | SpectrumPrecursorComparator & operator=(const SpectrumPrecursorComparator & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:86:30: note: by 'OpenMS::SteinScottImproveScore& OpenMS::SteinScottImproveScore::operator=(const OpenMS::SteinScottImproveScore&)' 86 | SteinScottImproveScore & operator=(const SteinScottImproveScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:68:21: note: by 'OpenMS::PeakAlignment& OpenMS::PeakAlignment::operator=(const OpenMS::PeakAlignment&)' 68 | PeakAlignment & operator=(const PeakAlignment & source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:80:32: note: by 'OpenMS::SpectraSTSimilarityScore& OpenMS::SpectraSTSimilarityScore::operator=(const OpenMS::SpectraSTSimilarityScore&)' 80 | SpectraSTSimilarityScore & operator=(const SpectraSTSimilarityScore & source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:80:27: note: by 'OpenMS::SpectrumCheapDPCorr& OpenMS::SpectrumCheapDPCorr::operator=(const OpenMS::SpectrumCheapDPCorr&)' 80 | SpectrumCheapDPCorr & operator=(const SpectrumCheapDPCorr & source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:69:35: note: by 'OpenMS::SpectrumPrecursorComparator& OpenMS::SpectrumPrecursorComparator::operator=(const OpenMS::SpectrumPrecursorComparator&)' 69 | SpectrumPrecursorComparator & operator=(const SpectrumPrecursorComparator & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:86:30: note: by 'OpenMS::SteinScottImproveScore& OpenMS::SteinScottImproveScore::operator=(const OpenMS::SteinScottImproveScore&)' 86 | SteinScottImproveScore & operator=(const SteinScottImproveScore & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DetectabilitySimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DetectabilitySimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DigestSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DigestSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:74:23: note: by 'OpenMS::DigestSimulation& OpenMS::DigestSimulation::operator=(const OpenMS::DigestSimulation&)' 74 | DigestSimulation& operator=(const DigestSimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/numeric:75, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h:62:27: note: by 'virtual OpenMS::EGHFitter1D& OpenMS::EGHFitter1D::operator=(const OpenMS::EGHFitter1D&)' 62 | virtual EGHFitter1D & operator=(const EGHFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:93:27: note: by 'OpenMS::IonizationSimulation& OpenMS::IonizationSimulation::operator=(const OpenMS::IonizationSimulation&)' 93 | IonizationSimulation& operator=(const IonizationSimulation& source); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp: In member function 'void OpenMS::IonizationSimulation::ionize(OpenMS::SimTypes::FeatureMapSim&, OpenMS::ConsensusMap&, OpenMS::SimTypes::MSSimExperiment&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp:149:46: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 149 | charge_consensus.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:68:23: note: by 'OpenMS::MSSim& OpenMS::MSSim::operator=(const OpenMS::MSSim&)' 68 | class OPENMS_DLLAPI MSSim : | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:74:23: note: by 'OpenMS::DigestSimulation& OpenMS::DigestSimulation::operator=(const OpenMS::DigestSimulation&)' 74 | DigestSimulation& operator=(const DigestSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:82:28: note: by 'OpenMS::RawMSSignalSimulation& OpenMS::RawMSSignalSimulation::operator=(const OpenMS::RawMSSignalSimulation&)' 82 | RawMSSignalSimulation& operator=(const RawMSSignalSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:75:34: note: by 'OpenMS::RawTandemMSSignalSimulation& OpenMS::RawTandemMSSignalSimulation::operator=(const OpenMS::RawTandemMSSignalSimulation&)' 75 | RawTandemMSSignalSimulation& operator=(const RawTandemMSSignalSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:93:27: note: by 'OpenMS::IonizationSimulation& OpenMS::IonizationSimulation::operator=(const OpenMS::IonizationSimulation&)' 93 | IonizationSimulation& operator=(const IonizationSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RTSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RTSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:82:28: note: by 'OpenMS::RawMSSignalSimulation& OpenMS::RawMSSignalSimulation::operator=(const OpenMS::RawMSSignalSimulation&)' 82 | RawMSSignalSimulation& operator=(const RawMSSignalSimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:75:34: note: by 'OpenMS::RawTandemMSSignalSimulation& OpenMS::RawTandemMSSignalSimulation::operator=(const OpenMS::RawTandemMSSignalSimulation&)' 75 | RawTandemMSSignalSimulation& operator=(const RawTandemMSSignalSimulation& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:53:23: note: by 'OpenMS::ITRAQLabeler& OpenMS::ITRAQLabeler::operator=(const OpenMS::ITRAQLabeler&)' 53 | class OPENMS_DLLAPI ITRAQLabeler : | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:45:23: note: by 'OpenMS::LabelFreeLabeler& OpenMS::LabelFreeLabeler::operator=(const OpenMS::LabelFreeLabeler&)' 45 | class OPENMS_DLLAPI LabelFreeLabeler : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:49:23: note: by 'OpenMS::O18Labeler& OpenMS::O18Labeler::operator=(const OpenMS::O18Labeler&)' 49 | class OPENMS_DLLAPI O18Labeler : | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:50:23: note: by 'OpenMS::SILACLabeler& OpenMS::SILACLabeler::operator=(const OpenMS::SILACLabeler&)' 50 | class OPENMS_DLLAPI SILACLabeler : | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:49:23: note: by 'OpenMS::ICPLLabeler& OpenMS::ICPLLabeler::operator=(const OpenMS::ICPLLabeler&)' 49 | class OPENMS_DLLAPI ICPLLabeler : | ^~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:53:23: note: by 'OpenMS::ITRAQLabeler& OpenMS::ITRAQLabeler::operator=(const OpenMS::ITRAQLabeler&)' 53 | class OPENMS_DLLAPI ITRAQLabeler : | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:45:23: note: by 'OpenMS::LabelFreeLabeler& OpenMS::LabelFreeLabeler::operator=(const OpenMS::LabelFreeLabeler&)' 45 | class OPENMS_DLLAPI LabelFreeLabeler : | ^~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:49:23: note: by 'OpenMS::O18Labeler& OpenMS::O18Labeler::operator=(const OpenMS::O18Labeler&)' 49 | class OPENMS_DLLAPI O18Labeler : | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp: In member function 'virtual void OpenMS::O18Labeler::postDigestHook(OpenMS::SimTypes::FeatureMapSimVector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp:219:40: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 219 | consensus_.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:50:23: note: by 'OpenMS::SILACLabeler& OpenMS::SILACLabeler::operator=(const OpenMS::SILACLabeler&)' 50 | class OPENMS_DLLAPI SILACLabeler : | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp: In member function 'virtual void OpenMS::SILACLabeler::postDigestHook(OpenMS::SimTypes::FeatureMapSimVector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp:439:40: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 439 | consensus_.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:49:23: note: by 'OpenMS::ICPLLabeler& OpenMS::ICPLLabeler::operator=(const OpenMS::ICPLLabeler&)' 49 | class OPENMS_DLLAPI ICPLLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp: In member function 'virtual void OpenMS::ICPLLabeler::postDigestHook(OpenMS::SimTypes::FeatureMapSimVector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp:399:40: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 399 | consensus_.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Contaminants.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Contaminants.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Contaminants.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Contaminants.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/FragmentMassError.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FWHM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/FWHM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FWHM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FWHM.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/MissedCleavages.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MzCalibration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/MzCalibration.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MzCalibration.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MzCalibration.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/PeptideMass.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/PeptideMass.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/PeptideMass.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/PeptideMass.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/RTAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/RTAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/RTAlignment.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/RTAlignment.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/DBSuitability.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/DBSuitability.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/DBSuitability.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/DBSuitability.h:66:23: note: by 'OpenMS::DBSuitability& OpenMS::DBSuitability::operator=(const OpenMS::DBSuitability&)' 66 | class OPENMS_DLLAPI DBSuitability: | ^~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/TIC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/numeric:75, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/numeric:61: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp: In member function 'void OpenMS::ConfidenceScoring::chooseDecoys_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:50:21: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator >; _Generator = boost::random::variate_generator&, boost::uniform_int<> >&]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 50 | random_shuffle(decoy_index_.begin(), decoy_index_.end(), rand_gen_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /usr/include/boost/multi_index_container.hpp:19, from /usr/include/boost/bimap/detail/bimap_core.hpp:34, from /usr/include/boost/bimap/bimap.hpp:61, from /usr/include/boost/bimap.hpp:13, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:40: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:327:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 327 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9, from /usr/include/boost/bind/bind.hpp:24, from /usr/include/boost/bind.hpp:29, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:64:23: note: by 'OpenMS::DiaPrescore::operator=' 64 | class OPENMS_DLLAPI DiaPrescore : | ^~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /usr/include/boost/math/special_functions/math_fwd.hpp:26, from /usr/include/boost/math/special_functions/fpclassify.hpp:18, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /usr/include/boost/math/special_functions/fpclassify.hpp:16: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:64:23: note: by 'OpenMS::DiaPrescore::operator=' 64 | class OPENMS_DLLAPI DiaPrescore : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:53:23: note: by 'OpenMS::MasstraceCorrelator& OpenMS::MasstraceCorrelator::operator=(const OpenMS::MasstraceCorrelator&)' 53 | class OPENMS_DLLAPI MasstraceCorrelator : | ^~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/boost/lexical_cast.hpp:26, from /usr/include/boost/math/tools/convert_from_string.hpp:17, from /usr/include/boost/math/constants/constants.hpp:14, from /usr/include/boost/math/special_functions/gamma.hpp:24, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:88:23: note: by 'OpenMS::MRMDecoy::operator=' 88 | class OPENMS_DLLAPI MRMDecoy : | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp: In member function 'void OpenMS::MRMDecoy::generateDecoys(const OpenMS::TargetedExperiment&, OpenMS::TargetedExperiment&, const OpenMS::String&, double, bool, const OpenMS::String&, int, double, double, double, double, const std::vector&, const std::vector&, bool, bool, int) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:401:26: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 401 | std::random_shuffle(item_list.begin(), item_list.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:44: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:62:23: note: by 'OpenMS::MRMFeatureFilter& OpenMS::MRMFeatureFilter::operator=(const OpenMS::MRMFeatureFilter&)' 62 | class OPENMS_DLLAPI MRMFeatureFilter : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMap(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::TargetedExperiment&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:208:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 208 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:208:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMapPercRSD(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::MRMFeatureQC&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:402:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 402 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:402:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:772:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 772 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In static member function 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int))': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp:36: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In instantiation of 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int)) [with TModelType = OpenMS::Math::RansacModelLinear; size_t = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp:69:102: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:772:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 772 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:63: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:772:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 772 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:64: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:52:23: note: by 'OpenMS::SwathMapMassCorrection& OpenMS::SwathMapMassCorrection::operator=(const OpenMS::SwathMapMassCorrection&)' 52 | class OPENMS_DLLAPI SwathMapMassCorrection : | ^~~~~~~~~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:52:23: note: by 'OpenMS::SwathMapMassCorrection& OpenMS::SwathMapMassCorrection::operator=(const OpenMS::SwathMapMassCorrection&)' 52 | class OPENMS_DLLAPI SwathMapMassCorrection : | ^~~~~~~~~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:69:23: note: by 'OpenMS::TargetedSpectraExtractor& OpenMS::TargetedSpectraExtractor::operator=(const OpenMS::TargetedSpectraExtractor&)' 69 | class OPENMS_DLLAPI TargetedSpectraExtractor : | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:322:48: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:322:48: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:219:23: note: by 'OpenMS::TransitionPQPFile& OpenMS::TransitionPQPFile::operator=(const OpenMS::TransitionPQPFile&)' 219 | class OPENMS_DLLAPI TransitionPQPFile : | ^~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ITransition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:156:64: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:156:64: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:157:70: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:157:70: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/fstream:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/fstream:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/INIUpdater.cpp [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp: In static member function 'static OpenMS::Internal::ToolDescription OpenMS::ToolHandler::getExternalTools_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp:321:12: warning: implicitly-declared 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' is deprecated [-Wdeprecated-copy] 321 | return tools_external_; | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:138:24: note: because 'OpenMS::Internal::ToolDescription' has user-provided 'OpenMS::Internal::ToolDescription& OpenMS::Internal::ToolDescription::operator=(const OpenMS::Internal::ToolDescription&)' 138 | ToolDescription& operator=(const ToolDescription& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In copy constructor 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp: In static member function 'static OpenMS::Internal::ToolDescription OpenMS::ToolHandler::getExternalTools_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp:321:12: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 321 | return tools_external_; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/13/bits/stl_vector.h:603:31: required from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tempbuf.h:61, from /usr/include/c++/13/bits/stl_algo.h:69, from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:37: /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp: In member function 'OpenMS::ParameterInformation OpenMS::TOPPBase::paramEntryToParameterInformation_(const OpenMS::Param::ParamEntry&, const OpenMS::String&, const OpenMS::String&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:796:12: warning: implicitly-declared 'OpenMS::ParameterInformation::ParameterInformation(const OpenMS::ParameterInformation&)' is deprecated [-Wdeprecated-copy] 796 | return param; | ^~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h:99:27: note: because 'OpenMS::ParameterInformation' has user-provided 'OpenMS::ParameterInformation& OpenMS::ParameterInformation::operator=(const OpenMS::ParameterInformation&)' 99 | ParameterInformation& operator=(const ParameterInformation& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp: In member function 'bool OpenMS::TOPPBase::writeCTD_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:2249:73: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 2249 | QStringList lines = ini_file_str.toQString().split("\n", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:44: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:2249:73: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 2249 | QStringList lines = ini_file_str.toQString().split("\n", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:2249:57: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 2249 | QStringList lines = ini_file_str.toQString().split("\n", QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ParameterInformation.cpp [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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Consolidate compiler generated dependencies of target OpenSwathAlgo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/OpenMS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_autogen make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Automatic MOC for target OpenMS_GUI cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisPainter.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisTickCalculator.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/GUIProgressLoggerImpl.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerData.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradient.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/ExternalProcessMBox.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisPainter.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ColorSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/HistogramDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/FilterList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/HistogramWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFile.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFileList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerData.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ListEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/ExternalProcessMBox.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradient.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/OutputDirectory.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ParamEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum2DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum3DOpenGLCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum3DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum3DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectrumWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASEdge.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASLogWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResource.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResources.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASScene.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASTabBar.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPViewSpectraViewBehavior.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DGoToDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DGoToDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum3DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum3DPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum3DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/FilterList.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/InputFile.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIdentificationViewWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIdentificationViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraViewWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DOpenGLCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DOpenGLCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DOpenGLCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASLogWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASLogWindow.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraViewWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIdentificationViewWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTabBar.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTabBar.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASLogWindow.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewIdentificationViewBehavior.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewIdentificationViewBehavior.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewSpectraViewBehavior.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewSpectraViewBehavior.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTabBar.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewIdentificationViewBehavior.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewSpectraViewBehavior.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Generating ui_TheoreticalSpectrumGenerationDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TheoreticalSpectrumGenerationDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.ui [ 81%] Generating qrc_resources.cpp cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/rcc --name resources --output /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/qrc_resources.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/resources.qrc [ 81%] Generating ui_DataFilterDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_DataFilterDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.ui [ 81%] Generating ui_FeatureEditDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_FeatureEditDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.ui [ 81%] Generating ui_FilterList.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_FilterList.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/FilterList.ui [ 83%] Generating ui_InputFile.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_InputFile.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.ui [ 83%] Generating ui_InputFileList.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_InputFileList.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFileList.ui [ 83%] Generating ui_LayerStatisticsDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_LayerStatisticsDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.ui [ 83%] Generating ui_OutputDirectory.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_OutputDirectory.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.ui [ 83%] Generating ui_ParamEditor.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_ParamEditor.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.ui [ 83%] Generating ui_PythonModuleRequirement.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_PythonModuleRequirement.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.ui [ 83%] Generating ui_PythonSelector.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_PythonSelector.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.ui [ 83%] Generating ui_Spectrum1DGoToDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum1DGoToDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.ui [ 83%] Generating ui_Spectrum1DPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum1DPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.ui [ 83%] Generating ui_Spectrum2DGoToDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum2DGoToDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.ui [ 84%] Generating ui_Spectrum2DPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum2DPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.ui [ 84%] Generating ui_Spectrum3DPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum3DPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.ui [ 84%] Generating ui_SpectrumAlignmentDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SpectrumAlignmentDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.ui [ 84%] Generating ui_SwathLibraryStats.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SwathLibraryStats.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SwathLibraryStats.ui [ 84%] Generating ui_SwathTabWidget.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SwathTabWidget.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.ui [ 84%] Generating ui_SwathWizardBase.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SwathWizardBase.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.ui [ 84%] Generating ui_TOPPASIOMappingDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASIOMappingDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.ui [ 84%] Generating ui_TOPPASInputFileDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASInputFileDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.ui [ 84%] Generating ui_TOPPASInputFilesDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASInputFilesDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.ui [ 84%] Generating ui_TOPPASOutputFilesDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASOutputFilesDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.ui [ 84%] Generating ui_TOPPASVertexNameDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASVertexNameDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.ui [ 84%] Generating ui_TOPPViewOpenDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPViewOpenDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.ui [ 84%] Generating ui_TOPPViewPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPViewPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.ui cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/OpenMS_GUI_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In constructor 'OpenMS::TOPPViewBase::TOPPViewBase(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:148:68: warning: 'const QRect QDesktopWidget::screenGeometry(int) const' is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 148 | QRect screen_geometry = QApplication::desktop()->screenGeometry(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:58, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:35: /usr/include/i386-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:79:67: note: declared here 79 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect screenGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:86: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:322:38: note: in expansion of macro 'CONNECTCAST' 322 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:27: /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:322:38: note: in expansion of macro 'CONNECTCAST' 322 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:357:29: note: in expansion of macro 'CONNECTCAST' 357 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:357:29: note: in expansion of macro 'CONNECTCAST' 357 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::runTOPPTool_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:2457:24: warning: 'int QTime::restart()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 2457 | topp_.timer.restart(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/FilterList.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:46: /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:236:54: note: declared here 236 | QT_DEPRECATED_X("Use QElapsedTimer instead") int restart(); | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::finishTOPPToolExecution(int, QProcess::ExitStatus)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:2493:79: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 2493 | QString("Execution time: %1 ms").arg(topp_.timer.elapsed())); | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In static member function 'static OpenMS::TOPPASTreeView* OpenMS::TOPPASBase::createTOPPToolsTreeWidget(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:482:52: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 482 | QStringList category_list = category_set.toList(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qitemselectionmodel.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractitemview.h:46, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreeview.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QTreeWidget:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:40: /usr/include/i386-linux-gnu/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:483:10: warning: 'void qSort(Container&) [with Container = QStringList]' is deprecated: Use std::sort [-Wdeprecated-declarations] 483 | qSort(category_list); | ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qlist.h:43, from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:49, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qwidget.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qframe.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractscrollarea.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractitemview.h:44: /usr/include/i386-linux-gnu/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In member function 'void OpenMS::TOPPASBase::openFilesInTOPPView(QStringList)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1559:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1559 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1559:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1559 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1559:66: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 1559 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/HistogramDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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/usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ 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-fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp: In member function 'virtual void OpenMS::Annotation1DPeakItem::draw(OpenMS::Spectrum1DCanvas*, QPainter&, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qmatrix.h:47, from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:49, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:36: /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp: In member function 'virtual void OpenMS::Annotation1DCaret::draw(OpenMS::Spectrum1DCanvas*, QPainter&, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qmatrix.h:47, from /usr/include/i386-linux-gnu/qt5/QtGui/qtransform.h:43, from /usr/include/i386-linux-gnu/qt5/QtGui/qstatictext.h:48, from /usr/include/i386-linux-gnu/qt5/QtGui/QStaticText:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/AxisPainter.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/AxisWidget.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include 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/usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/FilterList.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/HistogramWidget.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp: In constructor 'OpenMS::InputFile::InputFile(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp:57:48: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 57 | completer->setModel(new QDirModel(completer)); | ^ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QDirModel:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp:44: /usr/include/i386-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFileList.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp: In member function 'void OpenMS::LayerData::updatePeptideHitAnnotations_(OpenMS::PeptideHit&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:195:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 195 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:195:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 195 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:195:42: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 195 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp: In member function 'void OpenMS::Internal::ListTable::createNewRow()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp:332:22: warning: 'void QListWidget::setItemSelected(const QListWidgetItem*, bool)' is deprecated: Use QListWidgetItem::setSelected() instead [-Wdeprecated-declarations] 332 | setItemSelected(item, true); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QListWidget:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp:35: /usr/include/i386-linux-gnu/qt5/QtWidgets/qlistwidget.h:263:10: note: declared here 263 | void setItemSelected(const QListWidgetItem *item, bool select); | ^~~~~~~~~~~~~~~ [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MultiGradient.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp: In constructor 'OpenMS::OutputDirectory::OutputDirectory(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp:56:51: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 56 | QDirModel* dir_model = new QDirModel(completer); | ^ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QDirModel:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp:45: /usr/include/i386-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'bool OpenMS::Internal::ParamEditorDelegate::exists_(QString, QModelIndex) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:369:34: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 369 | while (index.parent().child(current_index, 0).isValid()) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/qstyleoption.h:66, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractitemdelegate.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qitemdelegate.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QItemDelegate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:374:31: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 374 | index.parent().child(current_index, 0).data(Qt::DisplayRole).toString() == name | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:377:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 377 | (index.data(Qt::UserRole).toInt() == 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() == 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:379:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 379 | (index.data(Qt::UserRole).toInt() != 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() != 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'void OpenMS::ParamEditor::load(OpenMS::Param&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:503:29: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 503 | item->setTextColor(0, Qt::darkGray); // color of nodes with children | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QTreeWidget:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:44: /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:535:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 535 | item->setTextColor(0, QColor(255, 140, 0, 255)); // orange | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:536:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 536 | item->setTextColor(2, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:537:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 537 | item->setTextColor(3, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:541:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 541 | item->setTextColor(0, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:542:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 542 | item->setTextColor(2, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:543:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 543 | item->setTextColor(3, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::updateEntries()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:543:35: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 543 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:272, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:35: /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:544:29: warning: 'void QTableWidgetItem::setTextColor(const QColor&)' is deprecated: Use QTableWidgetItem::setForeground() instead [-Wdeprecated-declarations] 544 | item->setTextColor(Qt::blue); // draw precursor information in blue | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:156:17: note: declared here 156 | inline void setTextColor(const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:565:35: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 565 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:571:35: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 571 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:670:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 670 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:671:33: warning: 'void QTableWidgetItem::setTextColor(const QColor&)' is deprecated: Use QTableWidgetItem::setForeground() instead [-Wdeprecated-declarations] 671 | item->setTextColor(Qt::blue); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:156:17: note: declared here 156 | inline void setTextColor(const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:701:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 701 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:702:33: warning: 'void QTableWidgetItem::setTextColor(const QColor&)' is deprecated: Use QTableWidgetItem::setForeground() instead [-Wdeprecated-declarations] 702 | item->setTextColor(Qt::blue); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:156:17: note: declared here 156 | inline void setTextColor(const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:722:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 722 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:728:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 728 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:755:41: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 755 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addTextItemToBottomRow_(const QString&, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:974:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 974 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addIntItemToBottomRow_(OpenMS::Int, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:982:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 982 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addDoubleItemToBottomRow_(double, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:990:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 990 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addCheckboxItemToBottomRow_(bool, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:1005:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 1005 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp: In member function 'void OpenMS::SpectraViewWidget::updateEntries(const OpenMS::LayerData&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp:767:21: warning: 'constexpr QFlags::QFlags(Zero) [with Enum = Qt::ItemFlag; Zero = int QFlags::Private::*]' is deprecated: Use default constructor instead [-Wdeprecated-declarations] 767 | item->setFlags(nullptr); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qglobal.h:1305, from /usr/include/i386-linux-gnu/qt5/QtCore/QtCore:4, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:3, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:3, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qflags.h:123:80: note: declared here 123 | QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {} | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp:773:21: warning: 'constexpr QFlags::QFlags(Zero) [with Enum = Qt::ItemFlag; Zero = int QFlags::Private::*]' is deprecated: Use default constructor instead [-Wdeprecated-declarations] 773 | item->setFlags(nullptr); | ~~~~~~~~~~~~~~^~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qflags.h:123:80: note: declared here 123 | QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {} | ^~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp: In member function 'void OpenMS::Spectrum1DCanvas::paint(QPainter*, QPaintEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp:700:36: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 700 | if (show_timing_) { timer.start(); } | ~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QTime:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp:40: /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp:934:51: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 934 | cout << "paint event took " << timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp: In member function 'virtual void OpenMS::Spectrum1DWidget::saveAsImage()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp:369:43: warning: 'static QPixmap QPixmap::grabWidget(QObject*, int, int, int, int)' is deprecated: Use QWidget::grab() instead [-Wdeprecated-declarations] 369 | QPixmap pixmap = QPixmap::grabWidget(this); | ~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:52, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp:36: /usr/include/i386-linux-gnu/qt5/QtGui/qpixmap.h:122:20: note: declared here 122 | static QPixmap grabWidget(QObject *widget, int x = 0, int y = 0, int w = -1, int h = -1); | ^~~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp: In member function 'virtual void OpenMS::Spectrum2DCanvas::paintEvent(QPaintEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1540:26: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1540 | overall_timer.start(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:36: /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1568:28: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1568 | layer_timer.start(); | ~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1612:71: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1612 | cout << " -layer " << i << " time: " << layer_timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1622:45: warning: 'QVector QRegion::rects() const' is deprecated: Use begin()/end() instead [-Wdeprecated-declarations] 1622 | QVector rects = e->region().rects(); | ~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qmatrix.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:49, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47: /usr/include/i386-linux-gnu/qt5/QtGui/qregion.h:125:20: note: declared here 125 | QVector rects() const; | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1720:59: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1720 | cout << " -overall time: " << overall_timer.elapsed() << " ms" << endl << endl; | ~~~~~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DWidget.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DCanvas.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DOpenGLCanvas.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DWidget.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp: In member function 'virtual void OpenMS::SpectrumCanvas::wheelEvent(QWheelEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:202:15: warning: 'int QWheelEvent::x() const' is deprecated: Use position() [-Wdeprecated-declarations] 202 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qtextlayout.h:49, from /usr/include/i386-linux-gnu/qt5/QtGui/qabstracttextdocumentlayout.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QtGui:5, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:4, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:3, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:48, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:36: /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:229:16: note: declared here 229 | inline int x() const { return int(p.x()); } | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:202:23: warning: 'int QWheelEvent::y() const' is deprecated: Use position() [-Wdeprecated-declarations] 202 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:231:16: note: declared here 231 | inline int y() const { return int(p.y()); } | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:202:35: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 202 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp: In member function 'void OpenMS::SpectrumCanvas::drawText_(QPainter&, QStringList)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:1025:43: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 1025 | width = max(width, 4 + metrics.width(text[i])); | ~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/QtGui:26: /usr/include/i386-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp: In member function 'virtual void OpenMS::SpectrumWidget::saveAsImage()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp:232:41: warning: 'static QPixmap QPixmap::grabWidget(QObject*, int, int, int, int)' is deprecated: Use QWidget::grab() instead [-Wdeprecated-declarations] 232 | QPixmap pixmap = QPixmap::grabWidget(this); | ~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:52, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp:35: /usr/include/i386-linux-gnu/qt5/QtGui/qpixmap.h:122:20: note: declared here 122 | static QPixmap grabWidget(QObject *widget, int x = 0, int y = 0, int w = -1, int h = -1); | ^~~~~~~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp: In member function 'virtual void OpenMS::TOPPASEdge::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:215:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 215 | int text_width=fm.width(str); | ~~~~~~~~^~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qpainter.h:59, from /usr/include/i386-linux-gnu/qt5/QtGui/QPainter:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:36: /usr/include/i386-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:235:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 235 | int text_width = fm.width(str); | ~~~~~~~~^~~~~ /usr/include/i386-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASLogWindow.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASResource.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASResources.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp: In member function 'virtual void OpenMS::TOPPASScene::contextMenuEvent(QGraphicsSceneContextMenuEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp:1833:70: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 1833 | QList supported_actions = supported_actions_set.toList(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/qgraphicssceneevent.h:49, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QGraphicsSceneMouseEvent:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:79, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASTabBar.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'void OpenMS::TOPPASToolVertex::getParameters_(QVector&, bool) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:326:10: warning: 'void qSort(Container&) [with Container = QVector]' is deprecated: Use std::sort [-Wdeprecated-declarations] 326 | qSort(io_infos); | ~~~~~^~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qlist.h:43, from /usr/include/i386-linux-gnu/qt5/QtCore/qstringlist.h:41, from /usr/include/i386-linux-gnu/qt5/QtGui/qcolor.h:46, from /usr/include/i386-linux-gnu/qt5/QtGui/qpixmap.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/qpainter.h:48, from /usr/include/i386-linux-gnu/qt5/QtGui/QPainter:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'QString OpenMS::TOPPASToolVertex::toolnameWithWhitespacesForFancyWordWrapping_(QPainter*, const QString&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:394:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 394 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qhashfunctions.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/qlist.h:47: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:394:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 394 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:394:34: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 394 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'void OpenMS::TOPPASVertex::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:209:39: warning: 'void QPainterPath::addRoundRect(const QRectF&, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 209 | if (round_shape) path.addRoundRect(boundingRect().marginsRemoved(QMarginsF(1, 1, 1, 1)), 20); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/QPainterPath:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:78, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:35: /usr/include/i386-linux-gnu/qt5/QtGui/qpainterpath.h:152:10: note: declared here 152 | void addRoundRect(const QRectF &rect, int roundness); | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'virtual QPainterPath OpenMS::TOPPASVertex::shape() const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:230:23: warning: 'void QPainterPath::addRoundRect(const QRectF&, int, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 230 | shape.addRoundRect(boundingRect(), 20, 20); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtGui/qpainterpath.h:147:10: note: declared here 147 | void addRoundRect(const QRectF &rect, int xRnd, int yRnd); | ^~~~~~~~~~~~ [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp: In member function 'virtual void OpenMS::TOPPASWidget::wheelEvent(QWheelEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:101:22: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 101 | zoom(event->delta() < 0); | ~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/QDragEnterEvent:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:44: /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp: In member function 'void OpenMS::TOPPViewIdentificationViewBehavior::addPeakAnnotationsFromID_(const OpenMS::PeptideHit&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:1178:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1178 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qwidget.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qtabbar.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QTabBar:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:38: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:1178:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1178 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:1178:50: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 1178 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewSpectraViewBehavior.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/qrc_resources.cpp [ 98%] Linking CXX shared library ../../lib/i386-linux-gnu/libOpenMS_GUI.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS_GUI.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libOpenMS_GUI.so.2.6.0 -o ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS_GUI.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenMS_GUI make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPView_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target TOPPView cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPView_autogen make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPView_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPView make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -MF CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o.d -o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp [ 98%] Linking CXX executable ../../bin/TOPPView cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPView.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -o ../../bin/TOPPView ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPView make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target INIFileEditor_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target INIFileEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target INIFileEditor_autogen make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/INIFileEditor_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIFileEditor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -MF CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o.d -o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp [ 98%] Linking CXX executable ../../bin/INIFileEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFileEditor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -o ../../bin/INIFileEditor ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target INIFileEditor make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SwathWizard_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target SwathWizard cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SwathWizard_autogen make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/SwathWizard_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SwathWizard make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -MF CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o.d -o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp [ 98%] Linking CXX executable ../../bin/SwathWizard cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/SwathWizard.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -o ../../bin/SwathWizard ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SwathWizard make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPAS_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target TOPPAS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPAS_autogen make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPAS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPAS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -MF CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o.d -o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp [100%] Linking CXX executable ../../bin/TOPPAS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPAS.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -o ../../bin/TOPPAS ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target TOPPAS make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/GUI.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target GUI make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f CMakeFiles/Makefile2 TOPP make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 81 make -f CMakeFiles/Makefile2 src/topp/CMakeFiles/TOPP.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 65%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 65%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/OpenMS_GUI_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI_autogen make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 65%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target OpenMS_GUI make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp 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-isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o -MF CMakeFiles/Resampler.dir/Resampler.cpp.o.d -o CMakeFiles/Resampler.dir/Resampler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp [ 79%] Linking CXX executable ../../bin/Resampler cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Resampler.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Resampler.dir/Resampler.cpp.o -o ../../bin/Resampler ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so 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/usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target Resampler make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu 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/usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target BaselineFilter make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Building CXX object src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -MF CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o.d -o CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp [ 80%] Linking CXX executable ../../bin/CometAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CometAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -o ../../bin/CometAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CometAdapter make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o -MF CMakeFiles/CompNovo.dir/CompNovo.cpp.o.d -o CMakeFiles/CompNovo.dir/CompNovo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp [ 80%] Linking CXX executable ../../bin/CompNovo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CompNovo.dir/CompNovo.cpp.o -o ../../bin/CompNovo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CompNovo make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -MF CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o.d -o CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp [ 80%] Linking CXX executable ../../bin/CompNovoCID cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovoCID.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -o ../../bin/CompNovoCID ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CompNovoCID make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -MF CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o.d -o CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp [ 80%] Linking CXX executable ../../bin/ConsensusID cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusID.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -o ../../bin/ConsensusID ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target ConsensusID make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -MF CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o.d -o CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp [ 80%] Linking CXX executable ../../bin/ConsensusMapNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusMapNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -o ../../bin/ConsensusMapNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target ConsensusMapNormalizer make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -MF CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o.d -o CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp [ 80%] Linking CXX executable ../../bin/CruxAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CruxAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -o ../../bin/CruxAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CruxAdapter make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -MF CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o.d -o CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp [ 80%] Linking CXX executable ../../bin/DatabaseSuitability cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseSuitability.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -o ../../bin/DatabaseSuitability ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target DatabaseSuitability make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o -MF CMakeFiles/Decharger.dir/Decharger.cpp.o.d -o CMakeFiles/Decharger.dir/Decharger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp [ 80%] Linking CXX executable ../../bin/Decharger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Decharger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/Decharger.dir/Decharger.cpp.o -o ../../bin/Decharger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target Decharger make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -MF CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o.d -o CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp [ 80%] Linking CXX executable ../../bin/DTAExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DTAExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -o ../../bin/DTAExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target DTAExtractor make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -MF CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o.d -o CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp [ 80%] Linking CXX executable ../../bin/EICExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/EICExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -o ../../bin/EICExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target EICExtractor make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -MF CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o.d -o CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp [ 80%] Linking CXX executable ../../bin/ExternalCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExternalCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -o ../../bin/ExternalCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target ExternalCalibration make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -MF CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp [ 80%] Linking CXX executable ../../bin/FalseDiscoveryRate cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FalseDiscoveryRate.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -o ../../bin/FalseDiscoveryRate ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FalseDiscoveryRate make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -MF CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o.d -o CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderCentroided cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderCentroided.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -o ../../bin/FeatureFinderCentroided ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderCentroided make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -MF CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o.d -o CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderIdentification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIdentification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -o ../../bin/FeatureFinderIdentification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderIdentification make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -MF CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o.d -o CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderIsotopeWavelet cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIsotopeWavelet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -o ../../bin/FeatureFinderIsotopeWavelet ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderIsotopeWavelet make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -MF CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o.d -o CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderMetabo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetabo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -o ../../bin/FeatureFinderMetabo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderMetabo make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -MF CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o.d -o CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderMRM cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMRM.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -o ../../bin/FeatureFinderMRM ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderMRM make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -MF CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o.d -o CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderMultiplex cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMultiplex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -o ../../bin/FeatureFinderMultiplex ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderMultiplex make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -MF CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o.d -o CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp [ 80%] Linking CXX executable ../../bin/FeatureLinkerLabeled cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerLabeled.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -o ../../bin/FeatureLinkerLabeled ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureLinkerLabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp [ 80%] Linking CXX executable ../../bin/FeatureLinkerUnlabeled cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeled.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -o ../../bin/FeatureLinkerUnlabeled ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureLinkerUnlabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp [ 80%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledKD cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledKD.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -o ../../bin/FeatureLinkerUnlabeledKD ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureLinkerUnlabeledKD make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp [ 81%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledQT cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledQT.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -o ../../bin/FeatureLinkerUnlabeledQT ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target FeatureLinkerUnlabeledQT make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target FidoAdapter make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Building CXX object src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem 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-fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o -MF CMakeFiles/FileConverter.dir/FileConverter.cpp.o.d -o CMakeFiles/FileConverter.dir/FileConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp [ 81%] Linking CXX executable ../../bin/FileConverter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileConverter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileConverter.dir/FileConverter.cpp.o -o ../../bin/FileConverter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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CMakeFiles/FileFilter.dir/FileFilter.cpp.o.d -o CMakeFiles/FileFilter.dir/FileFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp [ 81%] Linking CXX executable ../../bin/FileFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileFilter.dir/FileFilter.cpp.o -o ../../bin/FileFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so 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/usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target FileInfo make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o -MF CMakeFiles/FileMerger.dir/FileMerger.cpp.o.d -o CMakeFiles/FileMerger.dir/FileMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp [ 81%] Linking CXX executable ../../bin/FileMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileMerger.dir/FileMerger.cpp.o -o ../../bin/FileMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 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/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -MF CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o.d -o CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:212:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 212 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPGenericWrapper::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:497:18: warning: 'void QProcess::start(const QString&, QIODevice::OpenMode)' is deprecated: Use QProcess::start(const QString &program, const QStringList &arguments,OpenMode mode = ReadWrite) instead [-Wdeprecated-declarations] 497 | builder.start(call.toQString()); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QProcess:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:48: /usr/include/i386-linux-gnu/qt5/QtCore/qprocess.h:168:10: note: declared here 168 | void start(const QString &command, OpenMode mode = ReadWrite); | ^~~~~ [ 81%] Linking CXX executable ../../bin/GenericWrapper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericWrapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -o ../../bin/GenericWrapper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target GenericWrapper make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -MF CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o.d -o CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp [ 82%] Linking CXX executable ../../bin/GNPSExport cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GNPSExport.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -o ../../bin/GNPSExport ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target GNPSExport make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -MF CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o.d -o CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp [ 82%] Linking CXX executable ../../bin/HighResPrecursorMassCorrector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/HighResPrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -o ../../bin/HighResPrecursorMassCorrector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target HighResPrecursorMassCorrector make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -MF CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o.d -o CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp [ 82%] Linking CXX executable ../../bin/IDConflictResolver cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDConflictResolver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -o ../../bin/IDConflictResolver ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target IDConflictResolver make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB 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/usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDFilter make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMapper.dir/build.make 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/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o -MF CMakeFiles/IDMapper.dir/IDMapper.cpp.o.d -o CMakeFiles/IDMapper.dir/IDMapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp [ 83%] Linking CXX executable ../../bin/IDMapper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDMapper.dir/IDMapper.cpp.o -o ../../bin/IDMapper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDMapper make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Building CXX object src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o -MF CMakeFiles/IDMerger.dir/IDMerger.cpp.o.d -o CMakeFiles/IDMerger.dir/IDMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp [ 83%] Linking CXX executable ../../bin/IDMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDMerger.dir/IDMerger.cpp.o -o ../../bin/IDMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDMerger make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Building CXX object src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -MF CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o.d -o CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp [ 83%] Linking CXX executable ../../bin/IDPosteriorErrorProbability cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDPosteriorErrorProbability.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -o ../../bin/IDPosteriorErrorProbability ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDPosteriorErrorProbability make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Building CXX object src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o -MF CMakeFiles/IDRipper.dir/IDRipper.cpp.o.d -o CMakeFiles/IDRipper.dir/IDRipper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp [ 85%] Linking CXX executable ../../bin/IDRipper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRipper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDRipper.dir/IDRipper.cpp.o -o ../../bin/IDRipper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target IDRipper make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -MF CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o.d -o CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp [ 85%] Linking CXX executable ../../bin/IDRTCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRTCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -o ../../bin/IDRTCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target IDRTCalibration make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -MF CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o.d -o CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp [ 85%] Linking CXX executable ../../bin/InclusionExclusionListCreator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InclusionExclusionListCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -o ../../bin/InclusionExclusionListCreator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target InclusionExclusionListCreator make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -MF CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o.d -o CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPInspectAdapter::main_(OpenMS::Int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:758:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 758 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:758:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 758 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:758:117: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 758 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:807:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 807 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:807:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 807 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:807:117: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 807 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ [ 85%] Linking CXX executable ../../bin/InspectAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InspectAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -o ../../bin/InspectAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target InspectAdapter make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -MF CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o.d -o CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp [ 85%] Linking CXX executable ../../bin/InternalCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InternalCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -o ../../bin/InternalCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target InternalCalibration make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -MF CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o.d -o CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp [ 85%] Linking CXX executable ../../bin/IsobaricAnalyzer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IsobaricAnalyzer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -o ../../bin/IsobaricAnalyzer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target IsobaricAnalyzer make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -MF CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o.d -o CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp [ 85%] Linking CXX executable ../../bin/LuciphorAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/LuciphorAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -o ../../bin/LuciphorAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target LuciphorAdapter make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -MF CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o.d -o CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerIdentification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerIdentification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -o ../../bin/MapAlignerIdentification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerIdentification make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -MF CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o.d -o CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerPoseClustering cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerPoseClustering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -o ../../bin/MapAlignerPoseClustering ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerPoseClustering make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -MF CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o.d -o CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerSpectrum cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerSpectrum.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -o ../../bin/MapAlignerSpectrum ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerSpectrum make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -MF CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o.d -o CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerTreeGuided cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerTreeGuided.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -o ../../bin/MapAlignerTreeGuided ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerTreeGuided make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -MF CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o.d -o CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp [ 85%] Linking CXX executable ../../bin/MapNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -o ../../bin/MapNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapNormalizer make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -MF CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o.d -o CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp [ 86%] Linking CXX executable ../../bin/MapRTTransformer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapRTTransformer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -o ../../bin/MapRTTransformer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MapRTTransformer make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -MF CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o.d -o CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp [ 86%] Linking CXX executable ../../bin/MapStatistics cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapStatistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -o ../../bin/MapStatistics ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MapStatistics make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -MF CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o.d -o CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp [ 86%] Linking CXX executable ../../bin/MaRaClusterAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MaRaClusterAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -o ../../bin/MaRaClusterAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MaRaClusterAdapter make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -MF CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o.d -o CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPMascotAdapter::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp:576:28: warning: 'static int QProcess::execute(const QString&)' is deprecated: Use QProcess::execute(const QString &program, const QStringList &arguments) instead [-Wdeprecated-declarations] 576 | status = qp.execute(call.toQString()); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QProcess:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp:53: /usr/include/i386-linux-gnu/qt5/QtCore/qprocess.h:265:16: note: declared here 265 | static int execute(const QString &command); | ^~~~~~~ [ 86%] Linking CXX executable ../../bin/MascotAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -o ../../bin/MascotAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MascotAdapter make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -MF CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o.d -o CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp [ 86%] Linking CXX executable ../../bin/MascotAdapterOnline cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapterOnline.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -o ../../bin/MascotAdapterOnline ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MascotAdapterOnline make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -MF CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o.d -o CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp [ 86%] Linking CXX executable ../../bin/MassTraceExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassTraceExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -o ../../bin/MassTraceExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MassTraceExtractor make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -MF CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o.d -o CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp [ 87%] Linking CXX executable ../../bin/MRMMapper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMMapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -o ../../bin/MRMMapper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MRMMapper make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -MF CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o.d -o CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp [ 87%] Linking CXX executable ../../bin/MSGFPlusAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSGFPlusAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -o ../../bin/MSGFPlusAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MSGFPlusAdapter make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -MF CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o.d -o CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp [ 87%] Linking CXX executable ../../bin/MyriMatchAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MyriMatchAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -o ../../bin/MyriMatchAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MyriMatchAdapter make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -MF CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o.d -o CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp [ 87%] Linking CXX executable ../../bin/MzTabExporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzTabExporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -o ../../bin/MzTabExporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MzTabExporter make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -MF CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o.d -o CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp [ 88%] Linking CXX executable ../../bin/NoiseFilterGaussian cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterGaussian.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -o ../../bin/NoiseFilterGaussian ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target NoiseFilterGaussian make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -MF CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o.d -o CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp [ 88%] Linking CXX executable ../../bin/NoiseFilterSGolay cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterSGolay.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -o ../../bin/NoiseFilterSGolay ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target NoiseFilterSGolay make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -MF CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o.d -o CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp [ 88%] Linking CXX executable ../../bin/OMSSAAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OMSSAAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -o ../../bin/OMSSAAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OMSSAAdapter make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -MF CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o.d -o CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp [ 88%] Linking CXX executable ../../bin/OpenPepXL cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXL.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -o ../../bin/OpenPepXL ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenPepXL make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -MF CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o.d -o CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp [ 88%] Linking CXX executable ../../bin/OpenPepXLLF cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXLLF.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -o ../../bin/OpenPepXLLF ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenPepXLLF make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -MF CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o.d -o CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp [ 88%] Linking CXX executable ../../bin/OpenSwathAnalyzer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAnalyzer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -o ../../bin/OpenSwathAnalyzer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenSwathAnalyzer make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -MF CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o.d -o CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp In file included from /usr/include/boost/lexical_cast.hpp:26, from /usr/include/boost/math/tools/convert_from_string.hpp:17, from /usr/include/boost/math/constants/constants.hpp:14, from /usr/include/boost/math/special_functions/gamma.hpp:24, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../bin/OpenSwathAssayGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAssayGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -o ../../bin/OpenSwathAssayGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenSwathAssayGenerator make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -MF CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathChromatogramExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathChromatogramExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -o ../../bin/OpenSwathChromatogramExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathChromatogramExtractor make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -MF CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o.d -o CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathConfidenceScoring cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathConfidenceScoring.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -o ../../bin/OpenSwathConfidenceScoring ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathConfidenceScoring make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -MF CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o.d -o CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathDecoyGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDecoyGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -o ../../bin/OpenSwathDecoyGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathDecoyGenerator make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -MF CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o.d -o CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathFeatureXMLToTSV cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFeatureXMLToTSV.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -o ../../bin/OpenSwathFeatureXMLToTSV ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathFeatureXMLToTSV make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Building CXX object src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -MF CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o.d -o CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp [ 91%] Linking CXX executable ../../bin/OpenSwathRTNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRTNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -o ../../bin/OpenSwathRTNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathRTNormalizer make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Building CXX object src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -MF CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o.d -o CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp [ 92%] Linking CXX executable ../../bin/PeakPickerHiRes cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerHiRes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -o ../../bin/PeakPickerHiRes ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PeakPickerHiRes make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -MF CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o.d -o CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp [ 92%] Linking CXX executable ../../bin/PeakPickerWavelet cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerWavelet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -o ../../bin/PeakPickerWavelet ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PeakPickerWavelet make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -MF CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o.d -o CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp [ 92%] Linking CXX executable ../../bin/PepNovoAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PepNovoAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -o ../../bin/PepNovoAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PepNovoAdapter make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -MF CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o.d -o CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp:37: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp:35: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 92%] Linking CXX executable ../../bin/PeptideIndexer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideIndexer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -o ../../bin/PeptideIndexer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PeptideIndexer make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -MF CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o.d -o CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp [ 92%] Linking CXX executable ../../bin/PercolatorAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PercolatorAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -o ../../bin/PercolatorAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PercolatorAdapter make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -MF CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o.d -o CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp [ 92%] Linking CXX executable ../../bin/PhosphoScoring cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PhosphoScoring.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -o ../../bin/PhosphoScoring ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PhosphoScoring make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -MF CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o.d -o CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp [ 93%] Linking CXX executable ../../bin/PrecursorIonSelector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorIonSelector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -o ../../bin/PrecursorIonSelector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PrecursorIonSelector make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -MF CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o.d -o CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp [ 93%] Linking CXX executable ../../bin/PrecursorMassCorrector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -o ../../bin/PrecursorMassCorrector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PrecursorMassCorrector make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -MF CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o.d -o CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp [ 93%] Linking CXX executable ../../bin/ProteinInference cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinInference.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -o ../../bin/ProteinInference ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target ProteinInference make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -MF CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o.d -o CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp: In member function 'void TOPPProteinQuantifier::writeProteinTable_(OpenMS::SVOutStream&, const ProteinQuant&, const OpenMS::ExperimentalDesign&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp:566:47: warning: variable 'file_it' set but not used [-Wunused-but-set-variable] 566 | ConsensusMap::ColumnHeaders::iterator file_it = columns_headers_.begin(); | ^~~~~~~ [ 93%] Linking CXX executable ../../bin/ProteinQuantifier cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinQuantifier.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -o ../../bin/ProteinQuantifier ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target ProteinQuantifier make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -MF CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o.d -o CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp [ 93%] Linking CXX executable ../../bin/ProteinResolver cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinResolver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -o ../../bin/ProteinResolver ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target ProteinResolver make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o -MF CMakeFiles/PTModel.dir/PTModel.cpp.o.d -o CMakeFiles/PTModel.dir/PTModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPPTModel::main_(OpenMS::Int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp:456:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 456 | random_shuffle(training_peptides.begin(), training_peptides.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp:503:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 503 | random_shuffle(temp_training_peptides.begin(), temp_training_peptides.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../../bin/PTModel cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTModel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PTModel.dir/PTModel.cpp.o -o ../../bin/PTModel ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PTModel make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PTPredict.dir/PTPredict.cpp.o -o ../../bin/PTPredict ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PTPredict make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o -MF CMakeFiles/QualityControl.dir/QualityControl.cpp.o.d -o CMakeFiles/QualityControl.dir/QualityControl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp [ 95%] Linking CXX executable ../../bin/QualityControl cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/QualityControl.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/QualityControl.dir/QualityControl.cpp.o -o ../../bin/QualityControl ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target QualityControl make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o -MF CMakeFiles/RTModel.dir/RTModel.cpp.o.d -o CMakeFiles/RTModel.dir/RTModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp [ 95%] Linking CXX executable ../../bin/RTModel cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTModel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/RTModel.dir/RTModel.cpp.o -o ../../bin/RTModel ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target RTModel make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/RTPredict.dir/RTPredict.cpp.o -o ../../bin/RTPredict ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RTPredict make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -MF CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o.d -o CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp [ 96%] Linking CXX executable ../../bin/SeedListGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SeedListGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -o ../../bin/SeedListGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so 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src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -MF CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o.d -o CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp [ 96%] Linking CXX executable ../../bin/SpecLibSearcher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibSearcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -o ../../bin/SpecLibSearcher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpecLibSearcher make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -MF CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o.d -o CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterBernNorm cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterBernNorm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -o ../../bin/SpectraFilterBernNorm ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterBernNorm make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -MF CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o.d -o CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterMarkerMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterMarkerMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -o ../../bin/SpectraFilterMarkerMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterMarkerMower make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -MF CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o.d -o CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterNLargest cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNLargest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -o ../../bin/SpectraFilterNLargest ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNLargest make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -MF CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o.d -o CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -o ../../bin/SpectraFilterNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNormalizer make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -MF CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o.d -o CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterParentPeakMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterParentPeakMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -o ../../bin/SpectraFilterParentPeakMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterParentPeakMower make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -MF CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o.d -o CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterScaler cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterScaler.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -o ../../bin/SpectraFilterScaler ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterScaler make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -MF CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o.d -o CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterSqrtMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterSqrtMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -o ../../bin/SpectraFilterSqrtMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterSqrtMower make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -MF CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o.d -o CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterThresholdMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterThresholdMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -o ../../bin/SpectraFilterThresholdMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterThresholdMower make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -MF CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o.d -o CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterWindowMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterWindowMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -o ../../bin/SpectraFilterWindowMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterWindowMower make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -MF CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o.d -o CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp [ 97%] Linking CXX executable ../../bin/SpectraMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -o ../../bin/SpectraMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraMerger make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o -MF CMakeFiles/TextExporter.dir/TextExporter.cpp.o.d -o CMakeFiles/TextExporter.dir/TextExporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp [ 98%] Linking CXX executable ../../bin/TextExporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TextExporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TextExporter.dir/TextExporter.cpp.o -o ../../bin/TextExporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TextExporter make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -MF CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o.d -o CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp [ 98%] Linking CXX executable ../../bin/TOFCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOFCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -o ../../bin/TOFCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOFCalibration make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XFDR make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -MF CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o.d -o CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp [100%] Linking CXX executable ../../bin/XTandemAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/XTandemAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -o ../../bin/XTandemAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XTandemAdapter make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -MF CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o.d -o CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp [100%] Linking CXX executable ../../bin/ExecutePipeline cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExecutePipeline.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -o ../../bin/ExecutePipeline ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target ExecutePipeline make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target TOPP make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f CMakeFiles/Makefile2 UTILS make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 76 make -f CMakeFiles/Makefile2 src/utils/CMakeFiles/UTILS.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target OpenMS_GUI make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -MF CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o.d -o CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp [ 84%] Linking CXX executable ../../bin/INIUpdater cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIUpdater.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -o ../../bin/INIUpdater ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target INIUpdater make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -MF CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o.d -o CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp [ 84%] Linking CXX executable ../../bin/AccurateMassSearch cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AccurateMassSearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -o ../../bin/AccurateMassSearch ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AccurateMassSearch make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -MF CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o.d -o CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 84%] Linking CXX executable ../../bin/AssayGeneratorMetabo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssayGeneratorMetabo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -o ../../bin/AssayGeneratorMetabo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AssayGeneratorMetabo make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -MF CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o.d -o CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp [ 84%] Linking CXX executable ../../bin/ClusterMassTraces cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTraces.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -o ../../bin/ClusterMassTraces ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTraces make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -MF CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o.d -o CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp [ 84%] Linking CXX executable ../../bin/ClusterMassTracesByPrecursor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTracesByPrecursor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -o ../../bin/ClusterMassTracesByPrecursor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTracesByPrecursor make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o -MF CMakeFiles/CVInspector.dir/CVInspector.cpp.o.d -o CMakeFiles/CVInspector.dir/CVInspector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp [ 84%] Linking CXX executable ../../bin/CVInspector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/CVInspector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/CVInspector.dir/CVInspector.cpp.o -o ../../bin/CVInspector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target CVInspector make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -MF CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o.d -o CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp [ 85%] Linking CXX executable ../../bin/DatabaseFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -o ../../bin/DatabaseFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DatabaseFilter make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -MF CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o.d -o CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPDecoyDatabase::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp:250:27: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 250 | random_shuffle(tokenized.begin(), tokenized.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:67, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinHit.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 85%] Linking CXX executable ../../bin/DecoyDatabase cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DecoyDatabase.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -o ../../bin/DecoyDatabase ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DecoyDatabase make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -MF CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o.d -o CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp [ 85%] Linking CXX executable ../../bin/DeMeanderize cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeMeanderize.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -o ../../bin/DeMeanderize ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DeMeanderize make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem 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/usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Digestor make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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Linking CXX executable ../../bin/DigestorMotif cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DigestorMotif.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -o ../../bin/DigestorMotif ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target DigestorMotif make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o -MF CMakeFiles/Epifany.dir/Epifany.cpp.o.d -o CMakeFiles/Epifany.dir/Epifany.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp [ 86%] Linking CXX executable ../../bin/Epifany cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/Epifany.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Epifany.dir/Epifany.cpp.o -o ../../bin/Epifany ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Epifany make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -MF CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o.d -o CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp [ 86%] Linking CXX executable ../../bin/ERPairFinder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ERPairFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target ERPairFinder make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -MF CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o.d -o CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp [ 88%] Linking CXX executable ../../bin/FeatureFinderMetaboIdent cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetaboIdent.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -o ../../bin/FeatureFinderMetaboIdent ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target FeatureFinderMetaboIdent make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp [ 90%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp [ 90%] Linking CXX shared library ../../lib/i386-linux-gnu/libSuperHirn.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/cmake -E cmake_link_script CMakeFiles/SuperHirn.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libSuperHirn.so.2.6.0 -o ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 ../../lib/i386-linux-gnu/libSuperHirn.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target SuperHirn make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o -MF CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o.d -o CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp [ 90%] Linking CXX executable ../../bin/FeatureFinderSuperHirn cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderSuperHirn.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o -o ../../bin/FeatureFinderSuperHirn /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target FeatureFinderSuperHirn make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp [ 92%] Linking CXX executable ../../bin/FFEval cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFEval.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/FFEval.dir/FFEval.cpp.o -o ../../bin/FFEval ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so 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/usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target FFEval make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target FuzzyDiff make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp [ 92%] Linking CXX executable ../../bin/IDDecoyProbability cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDDecoyProbability.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -o ../../bin/IDDecoyProbability ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDDecoyProbability make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -MF CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o.d -o CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPIDExtractor::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp:192:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 192 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:67, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinHit.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 92%] Linking CXX executable ../../bin/IDExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -o ../../bin/IDExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDExtractor make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -MF CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o.d -o CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp [ 92%] Linking CXX executable ../../bin/IDMassAccuracy cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMassAccuracy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -o ../../bin/IDMassAccuracy ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDMassAccuracy make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -MF CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o.d -o CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp [ 92%] Linking CXX executable ../../bin/IDScoreSwitcher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDScoreSwitcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -o ../../bin/IDScoreSwitcher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDScoreSwitcher make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils 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/build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -MF CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o.d -o CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp [ 92%] Linking CXX executable ../../bin/IDSplitter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script 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/usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDSplitter make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" make[5]: Leaving directory 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/usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -MF CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o.d -o CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp [ 92%] Linking CXX executable ../../bin/LabeledEval cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabeledEval.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target LabeledEval make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -MF CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o.d -o CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp [ 92%] Linking CXX executable ../../bin/MassCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -o ../../bin/MassCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target MassCalculator make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -MF CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o.d -o CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp [ 93%] Linking CXX executable ../../bin/MetaboliteAdductDecharger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteAdductDecharger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -o ../../bin/MetaboliteAdductDecharger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MetaboliteAdductDecharger make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -MF CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o.d -o CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp [ 93%] Linking CXX executable ../../bin/MetaboliteSpectralMatcher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteSpectralMatcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -o ../../bin/MetaboliteSpectralMatcher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MetaboliteSpectralMatcher make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -MF CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o.d -o CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:195:15: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 195 | public std::binary_function, vector, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:205:15: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | public std::binary_function, pair, bool> | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:215:15: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 215 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/iostream:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39: In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(double) [with _CharT = char; _Traits = std::char_traits]', inlined from 'MapRateToScoreType MetaProSIP::normalizeToMax(const MapRateToScoreType&)' at /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:2480:52, inlined from 'virtual OpenMS::TOPPBase::ExitCodes MetaProSIP::main_(int, const char**)' at /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:3529:105: /usr/include/c++/13/ostream:223:25: warning: 'best_rate' may be used uninitialized [-Wmaybe-uninitialized] 223 | { return _M_insert(__f); } | ~~~~~~~~~^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes MetaProSIP::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:2475:12: note: 'best_rate' was declared here 2475 | double best_rate, best_score; | ^~~~~~~~~ [ 93%] Linking CXX executable ../../bin/MetaProSIP cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaProSIP.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -o ../../bin/MetaProSIP ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MetaProSIP make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -MF CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o.d -o CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp [ 93%] Linking CXX executable ../../bin/MRMPairFinder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMPairFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -o ../../bin/MRMPairFinder ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MRMPairFinder make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem 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CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o.d -o CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp [ 93%] Linking CXX executable ../../bin/MSFraggerAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSFraggerAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -o ../../bin/MSFraggerAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MSFraggerAdapter make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp [ 94%] Linking CXX executable ../../bin/MSstatsConverter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSstatsConverter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -o ../../bin/MSstatsConverter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so 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/usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target MSstatsConverter make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -MF CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o.d -o CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp [ 94%] Linking CXX executable ../../bin/MultiplexResolver cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiplexResolver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -o ../../bin/MultiplexResolver ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target MultiplexResolver make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -MF CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o.d -o CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp [ 94%] Linking CXX executable ../../bin/MzMLSplitter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzMLSplitter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -o ../../bin/MzMLSplitter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target MzMLSplitter make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -MF CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o.d -o CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp [ 94%] Linking CXX executable ../../bin/NovorAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NovorAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -o ../../bin/NovorAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target NovorAdapter make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -MF CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o.d -o CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp [ 94%] Linking CXX executable ../../bin/NucleicAcidSearchEngine cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicAcidSearchEngine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -o ../../bin/NucleicAcidSearchEngine ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target NucleicAcidSearchEngine make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -MF CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o.d -o CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp [ 94%] Linking CXX executable ../../bin/OpenMSInfo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMSInfo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -o ../../bin/OpenMSInfo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target OpenMSInfo make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -MF CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o.d -o CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp [ 94%] Linking CXX executable ../../bin/PeakPickerIterative cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerIterative.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -o ../../bin/PeakPickerIterative ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PeakPickerIterative make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -MF CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o.d -o CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp [ 94%] Linking CXX executable ../../bin/PSMFeatureExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PSMFeatureExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -o ../../bin/PSMFeatureExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PSMFeatureExtractor make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -MF CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o.d -o CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp [ 94%] Linking CXX executable ../../bin/QCCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -o ../../bin/QCCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target QCCalculator make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -MF CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o.d -o CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp [ 96%] Linking CXX executable ../../bin/QCEmbedder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCEmbedder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -o ../../bin/QCEmbedder ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCEmbedder make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o -MF CMakeFiles/QCExporter.dir/QCExporter.cpp.o.d -o CMakeFiles/QCExporter.dir/QCExporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp [ 96%] Linking CXX executable ../../bin/QCExporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCExporter.dir/QCExporter.cpp.o -o ../../bin/QCExporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -MF CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o.d -o CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp [ 96%] Linking CXX executable ../../bin/QCExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -o ../../bin/QCExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCExtractor make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB 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/usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o -MF CMakeFiles/QCImporter.dir/QCImporter.cpp.o.d -o CMakeFiles/QCImporter.dir/QCImporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp [ 96%] Linking CXX executable ../../bin/QCImporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCImporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCImporter.dir/QCImporter.cpp.o -o ../../bin/QCImporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCImporter make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem 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CMakeFiles/QCMerger.dir/QCMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp [ 96%] Linking CXX executable ../../bin/QCMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCMerger.dir/QCMerger.cpp.o -o ../../bin/QCMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCMerger make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -MF CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o.d -o CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp [ 96%] Linking CXX executable ../../bin/QCShrinker cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCShrinker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -o ../../bin/QCShrinker ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCShrinker make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -MF CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o.d -o CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp:85: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/vector:63, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp:34: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 96%] Linking CXX executable ../../bin/ProteomicsLFQ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteomicsLFQ.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -o ../../bin/ProteomicsLFQ ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target ProteomicsLFQ make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -MF CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o.d -o CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp [ 96%] Linking CXX executable ../../bin/RNADigestor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNADigestor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -o ../../bin/RNADigestor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNADigestor make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -MF CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o.d -o CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp [ 96%] Linking CXX executable ../../bin/RNAMassCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNAMassCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -o ../../bin/RNAMassCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNAMassCalculator make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -MF CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o.d -o CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp [ 96%] Linking CXX executable ../../bin/RNPxlXICFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlXICFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -o ../../bin/RNPxlXICFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNPxlXICFilter make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -MF CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o.d -o CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp:37: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp:35: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 96%] Linking CXX executable ../../bin/RNPxlSearch cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlSearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -o ../../bin/RNPxlSearch ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNPxlSearch make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -MF CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o.d -o CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp [ 96%] Linking CXX executable ../../bin/RTEvaluation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTEvaluation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -o ../../bin/RTEvaluation ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RTEvaluation make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -MF CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o.d -o CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp [ 96%] Linking CXX executable ../../bin/SemanticValidator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SemanticValidator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -o ../../bin/SemanticValidator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SemanticValidator make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -MF CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o.d -o CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp [ 96%] Linking CXX executable ../../bin/SequenceCoverageCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SequenceCoverageCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -o ../../bin/SequenceCoverageCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SequenceCoverageCalculator make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o cd 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -MF CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o.d -o CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp [ 96%] Linking CXX executable ../../bin/SimpleSearchEngine cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleSearchEngine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -o ../../bin/SimpleSearchEngine ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SimpleSearchEngine make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -MF CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o.d -o CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp [ 96%] Linking CXX executable ../../bin/SiriusAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SiriusAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -o ../../bin/SiriusAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SiriusAdapter make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB 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src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -MF CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o.d -o CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp [ 97%] Linking CXX executable ../../bin/SpecLibCreator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -o ../../bin/SpecLibCreator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so 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src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o -MF CMakeFiles/StaticModification.dir/StaticModification.cpp.o.d -o CMakeFiles/StaticModification.dir/StaticModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp [ 98%] Linking CXX executable ../../bin/StaticModification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/StaticModification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/StaticModification.dir/StaticModification.cpp.o -o ../../bin/StaticModification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl 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src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp [ 98%] Linking CXX executable ../../bin/SvmTheoreticalSpectrumGeneratorTrainer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -o ../../bin/SvmTheoreticalSpectrumGeneratorTrainer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SvmTheoreticalSpectrumGeneratorTrainer make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -MF CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o.d -o CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp [ 98%] Linking CXX executable ../../bin/TICCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TICCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -o ../../bin/TICCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TICCalculator make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -MF CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o.d -o CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp [ 98%] Linking CXX executable ../../bin/TransformationEvaluation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationEvaluation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -o ../../bin/TransformationEvaluation ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TransformationEvaluation make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -MF CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o.d -o CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp [ 98%] Linking CXX executable ../../bin/XMLValidator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/XMLValidator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -o ../../bin/XMLValidator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target XMLValidator make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -MF CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o.d -o CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp [ 98%] Linking CXX executable ../../bin/TargetedFileConverter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TargetedFileConverter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TargetedFileConverter make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -MF CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o.d -o CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9, from /usr/include/boost/bind/bind.hpp:24, from /usr/include/boost/bind.hpp:29, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp:36: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 98%] Linking CXX executable ../../bin/OpenSwathDIAPreScoring cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDIAPreScoring.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -o ../../bin/OpenSwathDIAPreScoring ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathDIAPreScoring make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -MF CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o.d -o CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathMzMLFileCacher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathMzMLFileCacher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -o ../../bin/OpenSwathMzMLFileCacher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathMzMLFileCacher make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathWorkflow cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathWorkflow.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -o ../../bin/OpenSwathWorkflow ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathWorkflow make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -MF CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o.d -o CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathFileSplitter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFileSplitter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -o ../../bin/OpenSwathFileSplitter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathFileSplitter make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -MF CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o.d -o CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathRewriteToFeatureXML cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRewriteToFeatureXML.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -o ../../bin/OpenSwathRewriteToFeatureXML ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathRewriteToFeatureXML make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp [ 98%] Linking CXX executable ../../bin/MRMTransitionGroupPicker cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMTransitionGroupPicker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -o ../../bin/MRMTransitionGroupPicker ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target MRMTransitionGroupPicker make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -MF CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o.d -o CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp [100%] Linking CXX executable ../../bin/ImageCreator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -o ../../bin/ImageCreator ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target ImageCreator make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target UTILS make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[2]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' # We need to tell the documenter program where the shared data are # in the source tree: share/OpenMS. That is not the install directory! # Also tell the CMake build system that we'll build the docs without # access to a XWindow server. VERBOSE=1 \ OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS \ HAS_XSERVER=OFF \ dh_auto_build -- doc_minimal cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" doc_minimal VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 doc_minimal make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 93 make -f CMakeFiles/Makefile2 doc/CMakeFiles/doc_minimal.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 56%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 56%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 56%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target OpenMS_GUI make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIUpdater make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/INIUpdater.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target INIUpdater make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target AccurateMassSearch make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/AccurateMassSearch.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target AccurateMassSearch make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target AssayGeneratorMetabo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target AssayGeneratorMetabo make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ClusterMassTraces make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTraces.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ClusterMassTraces make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ClusterMassTracesByPrecursor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ClusterMassTracesByPrecursor make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CVInspector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/CVInspector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CVInspector make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DatabaseFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DatabaseFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target DatabaseFilter make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DecoyDatabase make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DecoyDatabase.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target DecoyDatabase make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DeMeanderize make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DeMeanderize.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target DeMeanderize make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Digestor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/Digestor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target Digestor make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DigestorMotif make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DigestorMotif.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target DigestorMotif make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Epifany make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/Epifany.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target Epifany make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ERPairFinder make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ERPairFinder.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target ERPairFinder make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMetaboIdent make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target FeatureFinderMetaboIdent make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/DependInfo.cmake "--color=" Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SuperHirn make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/superhirn/CMakeFiles/SuperHirn.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target SuperHirn make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderSuperHirn make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target FeatureFinderSuperHirn make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FFEval make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FFEval.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target FFEval make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FuzzyDiff.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FuzzyDiff make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FuzzyDiff.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target FuzzyDiff make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDDecoyProbability make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDDecoyProbability.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDDecoyProbability make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDExtractor make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDMassAccuracy make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDMassAccuracy.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDMassAccuracy make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDScoreSwitcher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDScoreSwitcher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDScoreSwitcher make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDSplitter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDSplitter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDSplitter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDSplitter make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target LabeledEval make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/LabeledEval.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target LabeledEval make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MassCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MassCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target MassCalculator make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MetaboliteAdductDecharger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MetaboliteAdductDecharger make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MetaboliteSpectralMatcher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MetaboliteSpectralMatcher make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MetaProSIP make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MetaProSIP.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MetaProSIP make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MRMPairFinder make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MRMPairFinder.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MRMPairFinder make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSFraggerAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MSFraggerAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MSFraggerAdapter make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSSimulator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MSSimulator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MSSimulator make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSstatsConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSstatsConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MSstatsConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target MSstatsConverter make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MultiplexResolver make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MultiplexResolver.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target MultiplexResolver make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MzMLSplitter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MzMLSplitter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target MzMLSplitter make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NovorAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/NovorAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target NovorAdapter make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NucleicAcidSearchEngine make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target NucleicAcidSearchEngine make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMSInfo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenMSInfo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target OpenMSInfo make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeakPickerIterative make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/PeakPickerIterative.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target PeakPickerIterative make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PSMFeatureExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/PSMFeatureExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target PSMFeatureExtractor make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target QCCalculator make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCEmbedder make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCEmbedder.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCEmbedder make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCExporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCExporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCExporter make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCExtractor make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCImporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCImporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCImporter make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCMerger make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCShrinker make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCShrinker.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCShrinker make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteomicsLFQ make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ProteomicsLFQ.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target ProteomicsLFQ make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNADigestor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNADigestor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNADigestor make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNAMassCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNAMassCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNAMassCalculator make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNPxlXICFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlXICFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNPxlXICFilter make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNPxlSearch make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlSearch.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNPxlSearch make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RTEvaluation make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RTEvaluation.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RTEvaluation make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SemanticValidator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SemanticValidator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SemanticValidator make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SequenceCoverageCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SequenceCoverageCalculator make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SimpleSearchEngine make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SimpleSearchEngine.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SimpleSearchEngine make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SiriusAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SiriusAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SiriusAdapter make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpecLibCreator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SpecLibCreator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target SpecLibCreator make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraSTSearchAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target SpectraSTSearchAdapter make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/StaticModification.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target StaticModification make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/StaticModification.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target StaticModification make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SvmTheoreticalSpectrumGeneratorTrainer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target SvmTheoreticalSpectrumGeneratorTrainer make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TICCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/TICCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target TICCalculator make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TransformationEvaluation make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/TransformationEvaluation.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target TransformationEvaluation make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target XMLValidator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/XMLValidator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target XMLValidator make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TargetedFileConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/TargetedFileConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target TargetedFileConverter make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathDIAPreScoring make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathDIAPreScoring make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathMzMLFileCacher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathMzMLFileCacher make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathWorkflow make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathWorkflow.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathWorkflow make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathFileSplitter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathFileSplitter make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathRewriteToFeatureXML make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathRewriteToFeatureXML make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MRMTransitionGroupPicker make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target MRMTransitionGroupPicker make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ImageCreator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ImageCreator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target ImageCreator make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target UTILS make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Resampler.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Resampler.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Resampler make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/Resampler.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target Resampler make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/BaselineFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/BaselineFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target BaselineFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/BaselineFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target BaselineFilter make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CometAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CometAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CometAdapter make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CompNovo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CompNovo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CompNovo make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CompNovoCID make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CompNovoCID.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CompNovoCID make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ConsensusID make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusID.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target ConsensusID make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ConsensusMapNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target ConsensusMapNormalizer make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CruxAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CruxAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CruxAdapter make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DatabaseSuitability make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/DatabaseSuitability.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target DatabaseSuitability make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Decharger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/Decharger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target Decharger make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DTAExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/DTAExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target DTAExtractor make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target EICExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/EICExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target EICExtractor make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ExternalCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ExternalCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target ExternalCalibration make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FalseDiscoveryRate make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FalseDiscoveryRate.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FalseDiscoveryRate make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderCentroided make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderCentroided.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderCentroided make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderIdentification make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIdentification.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderIdentification make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderIsotopeWavelet make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderIsotopeWavelet make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMetabo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMetabo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderMetabo make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMRM make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMRM.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderMRM make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMultiplex make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderMultiplex make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerLabeled make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureLinkerLabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerUnlabeled make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureLinkerUnlabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerUnlabeledKD make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureLinkerUnlabeledKD make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerUnlabeledQT make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FeatureLinkerUnlabeledQT make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FidoAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FidoAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FidoAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FidoAdapter make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileConverter make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileFilter.dir/FileFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileFilter make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileInfo.dir/FileInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileInfo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileInfo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileInfo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileInfo make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileMerger make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GenericWrapper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target GenericWrapper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/GenericWrapper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target GenericWrapper make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target GNPSExport make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/GNPSExport.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target GNPSExport make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target HighResPrecursorMassCorrector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target HighResPrecursorMassCorrector make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDConflictResolver make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDConflictResolver.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target IDConflictResolver make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDFileConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDFileConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDFileConverter make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDFilter.dir/IDFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDFilter make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDMapper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDMapper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDMapper make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDMerger make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDPosteriorErrorProbability make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDPosteriorErrorProbability make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDRipper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDRipper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target IDRipper make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDRTCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDRTCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target IDRTCalibration make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target InclusionExclusionListCreator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target InclusionExclusionListCreator make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target InspectAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/InspectAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target InspectAdapter make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target InternalCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/InternalCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target InternalCalibration make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IsobaricAnalyzer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IsobaricAnalyzer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target IsobaricAnalyzer make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target LuciphorAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/LuciphorAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target LuciphorAdapter make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerIdentification make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerIdentification.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerIdentification make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerPoseClustering make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerPoseClustering make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerSpectrum make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerSpectrum.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerSpectrum make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerTreeGuided make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerTreeGuided make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapNormalizer make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapRTTransformer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapRTTransformer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MapRTTransformer make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapStatistics make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapStatistics.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MapStatistics make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MaRaClusterAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MaRaClusterAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MaRaClusterAdapter make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MascotAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MascotAdapter make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MascotAdapterOnline make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapterOnline.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MascotAdapterOnline make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MassTraceExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MassTraceExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MassTraceExtractor make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MRMMapper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MRMMapper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MRMMapper make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSGFPlusAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MSGFPlusAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MSGFPlusAdapter make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MyriMatchAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MyriMatchAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MyriMatchAdapter make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MzTabExporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MzTabExporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MzTabExporter make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NoiseFilterGaussian make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterGaussian.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NoiseFilterGaussian make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NoiseFilterSGolay make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterSGolay.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NoiseFilterSGolay make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OMSSAAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OMSSAAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OMSSAAdapter make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenPepXL make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXL.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenPepXL make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenPepXLLF make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXLLF.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenPepXLLF make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathAnalyzer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathAnalyzer make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathAssayGenerator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathAssayGenerator make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathChromatogramExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathChromatogramExtractor make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathConfidenceScoring make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathConfidenceScoring make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathDecoyGenerator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathDecoyGenerator make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathFeatureXMLToTSV make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathFeatureXMLToTSV make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathRTNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target OpenSwathRTNormalizer make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeakPickerHiRes make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerHiRes.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PeakPickerHiRes make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeakPickerWavelet make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerWavelet.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PeakPickerWavelet make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PepNovoAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PepNovoAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PepNovoAdapter make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeptideIndexer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PeptideIndexer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PeptideIndexer make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PercolatorAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PercolatorAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PercolatorAdapter make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PhosphoScoring make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PhosphoScoring.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PhosphoScoring make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PrecursorIonSelector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorIonSelector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PrecursorIonSelector make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PrecursorMassCorrector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorMassCorrector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PrecursorMassCorrector make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteinInference make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ProteinInference.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ProteinInference make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteinQuantifier make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ProteinQuantifier.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ProteinQuantifier make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteinResolver make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ProteinResolver.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ProteinResolver make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PTModel make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PTModel.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PTModel make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PTPredict make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PTPredict.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PTPredict make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QualityControl make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/QualityControl.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target QualityControl make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RTModel make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/RTModel.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target RTModel make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RTPredict make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/RTPredict.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RTPredict make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SeedListGenerator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SeedListGenerator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SeedListGenerator make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpecLibSearcher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpecLibSearcher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpecLibSearcher make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterBernNorm make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterBernNorm make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterMarkerMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterMarkerMower make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterNLargest make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNLargest.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNLargest make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNormalizer make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterParentPeakMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterParentPeakMower make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterScaler make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterScaler.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterScaler make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterSqrtMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterSqrtMower make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterThresholdMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterThresholdMower make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterWindowMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterWindowMower make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraMerger make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TextExporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TextExporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TextExporter make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOFCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TOFCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOFCalibration make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target XFDR make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/XFDR.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XFDR make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target XTandemAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/XTandemAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XTandemAdapter make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ExecutePipeline make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ExecutePipeline.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target ExecutePipeline make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target TOPP make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/CMakeFiles/doc_minimal.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Build the doxygen documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating html documentation without class/TOPP/UTILS documentation" Creating html documentation without class/TOPP/UTILS documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory html cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /usr/bin/doxygen doxygen/Doxyfile_noclass warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 115 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'TCL_SUBST' at line 284 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1147 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1283 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1575 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1877 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1893 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1967 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 2072 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2260 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2302 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2309 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2533 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/topp Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/utils Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_advanced.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_advanced.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_concepts.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_concepts.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_scripting.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_scripting.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPAS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPAS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_interface.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_interface.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Changelog.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Changelog.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/ExternalCode.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/ExternalCode.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/FAQ.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/FAQ.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/KnownDevBugs.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/KnownDevBugs.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Main.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Main.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Modules.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Modules.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/OpenMS_Tutorial_html.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/OpenMS_Tutorial_html.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/PyOpenMS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/PyOpenMS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/QuickStart.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/QuickStart.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP_Tutorial_html.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP_Tutorial_html.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPPAS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPPAS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/UTILS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/UTILS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/common-cmake-parameters.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/common-cmake-parameters.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Searching for tag less structs... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing memFontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ber references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating images for formulas in HTML... Generating image form_0.png for formula Generating image form_1.png for formula Generating image form_2.png for formula Generating image form_3.png for formula Generating image form_4.png for formula Generating image form_5.png for formula Generating image form_6.png for formula Generating image form_7.png for formula Generating image form_8.png for formula Generating image form_9.png for formula Generating image form_0_dark.png for formula Generating image form_1_dark.png for formula Generating image form_2_dark.png for formula Generating image form_3_dark.png for formula Generating image form_4_dark.png for formula Generating image form_5_dark.png for formula Generating image form_6_dark.png for formula Generating image form_7_dark.png for formula Generating image form_8_dark.png for formula Generating image form_9_dark.png for formula Generating example documentation... Generating file sources... Parsing code for file common-cmake-parameters.doxygen... Parsing code for file install-linux-bin.doxygen... Parsing code for file install-linux.doxygen... Parsing code for file install-macs-bin.doxygen... Parsing code for file install-macs.doxygen... Parsing code for file install-win-bin.doxygen... Parsing code for file install-win.doxygen... Parsing code for file Changelog.doxygen... Parsing code for file ExternalCode.doxygen... Parsing code for file FAQ.doxygen... Parsing code for file KnownDevBugs.doxygen... Parsing code for file Main.doxygen... Parsing code for file Modules.doxygen... Parsing code for file OpenMS_Tutorial_html.doxygen... Parsing code for file PyOpenMS.doxygen... Parsing code for file QuickStart.doxygen... Parsing code for file TOPP.doxygen... Parsing code for file TOPP_Tutorial_html.doxygen... Parsing code for file UTILS.doxygen... Parsing code for file OpenMS_Tutorial.doxygen... Parsing code for file TOPP_advanced.doxygen... Parsing code for file TOPP_concepts.doxygen... Parsing code for file TOPP_scripting.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPView_calling_topp.doxygen... Parsing code for file TOPPView_interface.doxygen... Parsing code for file INIFileEditor.cpp... Parsing code for file SwathWizard.cpp... Parsing code for file TOPPAS.cpp... Parsing code for file TOPPView.cpp... Parsing code for file INIFileEditorWindow.cpp... Parsing code for file QApplicationTOPP.cpp... Parsing code for file SwathWizardBase.cpp... Parsing code for file TOPPASBase.cpp... Parsing code for file TOPPViewBase.cpp... Parsing code for file BaselineFilter.cpp... Parsing code for file CometAdapter.cpp... Parsing code for file CompNovo.cpp... Parsing code for file CompNovoCID.cpp... Parsing code for file ConsensusID.cpp... Parsing code for file ConsensusMapNormalizer.cpp... Parsing code for file CruxAdapter.cpp... Parsing code for file DatabaseSuitability.cpp... Parsing code for file Decharger.cpp... Parsing code for file DTAExtractor.cpp... Parsing code for file EICExtractor.cpp... Parsing code for file ExecutePipeline.cpp... Parsing code for file ExternalCalibration.cpp... Parsing code for file FalseDiscoveryRate.cpp... Parsing code for file FeatureFinderCentroided.cpp... Parsing code for file FeatureFinderIdentification.cpp... Parsing code for file FeatureFinderIsotopeWavelet.cpp... Parsing code for file FeatureFinderMetabo.cpp... Parsing code for file FeatureFinderMRM.cpp... Parsing code for file FeatureFinderMultiplex.cpp... Generating code for file FeatureLinkerBase.cpp... Parsing code for file FeatureLinkerLabeled.cpp... Parsing code for file FeatureLinkerUnlabeled.cpp... Parsing code for file FeatureLinkerUnlabeledKD.cpp... Parsing code for file FeatureLinkerUnlabeledQT.cpp... Parsing code for file FidoAdapter.cpp... Parsing code for file FileConverter.cpp... Parsing code for file FileFilter.cpp... Parsing code for file FileInfo.cpp... Parsing code for file FileMerger.cpp... Parsing code for file GenericWrapper.cpp... Parsing code for file GNPSExport.cpp... Parsing code for file HighResPrecursorMassCorrector.cpp... Parsing code for file IDConflictResolver.cpp... Parsing code for file IDFileConverter.cpp... Parsing code for file IDFilter.cpp... Parsing code for file IDMapper.cpp... Parsing code for file IDMerger.cpp... Parsing code for file IDPosteriorErrorProbability.cpp... Parsing code for file IDRipper.cpp... Parsing code for file IDRTCalibration.cpp... Parsing code for file InclusionExclusionListCreator.cpp... Parsing code for file InspectAdapter.cpp... Parsing code for file InternalCalibration.cpp... Parsing code for file IsobaricAnalyzer.cpp... Parsing code for file LuciphorAdapter.cpp... Parsing code for file MapAlignerIdentification.cpp... Parsing code for file MapAlignerPoseClustering.cpp... Parsing code for file MapAlignerSpectrum.cpp... Parsing code for file MapAlignerTreeGuided.cpp... Parsing code for file MapNormalizer.cpp... Parsing code for file MapRTTransformer.cpp... Parsing code for file MapStatistics.cpp... Parsing code for file MaRaClusterAdapter.cpp... Parsing code for file MascotAdapter.cpp... Parsing code for file MascotAdapterOnline.cpp... Parsing code for file MassTraceExtractor.cpp... Parsing code for file MRMMapper.cpp... Parsing code for file MSGFPlusAdapter.cpp... Parsing code for file MyriMatchAdapter.cpp... Parsing code for file MzTabExporter.cpp... Parsing code for file NoiseFilterGaussian.cpp... Parsing code for file NoiseFilterSGolay.cpp... Parsing code for file OMSSAAdapter.cpp... Parsing code for file OpenPepXL.cpp... Parsing code for file OpenPepXLLF.cpp... Parsing code for file OpenSwathAnalyzer.cpp... Parsing code for file OpenSwathAssayGenerator.cpp... Parsing code for file OpenSwathChromatogramExtractor.cpp... Parsing code for file OpenSwathConfidenceScoring.cpp... Parsing code for file OpenSwathDecoyGenerator.cpp... Parsing code for file OpenSwathFeatureXMLToTSV.cpp... Parsing code for file OpenSwathRTNormalizer.cpp... Parsing code for file PeakPickerHiRes.cpp... Parsing code for file PeakPickerWavelet.cpp... Parsing code for file PepNovoAdapter.cpp... Parsing code for file PeptideIndexer.cpp... Parsing code for file PercolatorAdapter.cpp... Parsing code for file PhosphoScoring.cpp... Parsing code for file PrecursorIonSelector.cpp... Parsing code for file PrecursorMassCorrector.cpp... Parsing code for file ProteinInference.cpp... Parsing code for file ProteinQuantifier.cpp... Parsing code for file ProteinResolver.cpp... Parsing code for file PTModel.cpp... Parsing code for file PTPredict.cpp... Parsing code for file QualityControl.cpp... Parsing code for file Resampler.cpp... Parsing code for file RTModel.cpp... Parsing code for file RTPredict.cpp... Parsing code for file SeedListGenerator.cpp... Parsing code for file SpecLibSearcher.cpp... Parsing code for file SpectraFilterBernNorm.cpp... Parsing code for file SpectraFilterMarkerMower.cpp... Parsing code for file SpectraFilterNLargest.cpp... Parsing code for file SpectraFilterNormalizer.cpp... Parsing code for file SpectraFilterParentPeakMower.cpp... Parsing code for file SpectraFilterScaler.cpp... Parsing code for file SpectraFilterSqrtMower.cpp... Parsing code for file SpectraFilterThresholdMower.cpp... Parsing code for file SpectraFilterWindowMower.cpp... Parsing code for file SpectraMerger.cpp... Parsing code for file TextExporter.cpp... Parsing code for file TOFCalibration.cpp... Parsing code for file XFDR.cpp... Parsing code for file XTandemAdapter.cpp... Parsing code for file AccurateMassSearch.cpp... Parsing code for file AssayGeneratorMetabo.cpp... Parsing code for file ClusterMassTraces.cpp... Parsing code for file ClusterMassTracesByPrecursor.cpp... Parsing code for file CVInspector.cpp... Parsing code for file DatabaseFilter.cpp... Parsing code for file DecoyDatabase.cpp... Parsing code for file DeMeanderize.cpp... Parsing code for file Digestor.cpp... Parsing code for file DigestorMotif.cpp... Parsing code for file Epifany.cpp... Parsing code for file ERPairFinder.cpp... Parsing code for file FeatureFinderMetaboIdent.cpp... Parsing code for file FeatureFinderSuperHirn.cpp... Parsing code for file FFEval.cpp... Parsing code for file FuzzyDiff.cpp... Parsing code for file IDDecoyProbability.cpp... Parsing code for file IDExtractor.cpp... Parsing code for file IDMassAccuracy.cpp... Parsing code for file IDScoreSwitcher.cpp... Parsing code for file IDSplitter.cpp... Parsing code for file ImageCreator.cpp... Parsing code for file INIUpdater.cpp... Parsing code for file LabeledEval.cpp... Parsing code for file MassCalculator.cpp... Parsing code for file MetaboliteAdductDecharger.cpp... Parsing code for file MetaboliteSpectralMatcher.cpp... Parsing code for file MetaProSIP.cpp... Parsing code for file MRMPairFinder.cpp... Parsing code for file MRMTransitionGroupPicker.cpp... Parsing code for file MSFraggerAdapter.cpp... Parsing code for file MSSimulator.cpp... Parsing code for file MSstatsConverter.cpp... Parsing code for file MultiplexResolver.cpp... Parsing code for file MzMLSplitter.cpp... Parsing code for file NovorAdapter.cpp... Parsing code for file NucleicAcidSearchEngine.cpp... Parsing code for file OpenMSInfo.cpp... Parsing code for file OpenSwathDIAPreScoring.cpp... Parsing code for file OpenSwathFileSplitter.cpp... Parsing code for file OpenSwathMzMLFileCacher.cpp... Parsing code for file OpenSwathRewriteToFeatureXML.cpp... Parsing code for file OpenSwathWorkflow.cpp... Parsing code for file PeakPickerIterative.cpp... Parsing code for file ProteomicsLFQ.cpp... Parsing code for file PSMFeatureExtractor.cpp... Parsing code for file QCCalculator.cpp... Parsing code for file QCEmbedder.cpp... Parsing code for file QCExporter.cpp... Parsing code for file QCExtractor.cpp... Parsing code for file QCImporter.cpp... Parsing code for file QCMerger.cpp... Parsing code for file QCShrinker.cpp... Parsing code for file RNADigestor.cpp... Parsing code for file RNAMassCalculator.cpp... Parsing code for file RNPxlSearch.cpp... Parsing code for file RNPxlXICFilter.cpp... Parsing code for file RTEvaluation.cpp... Parsing code for file SemanticValidator.cpp... Parsing code for file SequenceCoverageCalculator.cpp... Parsing code for file SimpleSearchEngine.cpp... Parsing code for file SiriusAdapter.cpp... Parsing code for file SpecLibCreator.cpp... Parsing code for file SpectraSTSearchAdapter.cpp... Parsing code for file StaticModification.cpp... Parsing code for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing code for file TargetedFileConverter.cpp... Parsing code for file TICCalculator.cpp... Parsing code for file TransformationEvaluation.cpp... Parsing code for file XMLValidator.cpp... Generating file documentation... Generating docs for file common-cmake-parameters.doxygen... Generating docs for file install-linux-bin.doxygen... Generating docs for file install-linux.doxygen... Generating docs for file install-macs-bin.doxygen... Generating docs for file install-macs.doxygen... Generating docs for file install-win-bin.doxygen... Generating docs for file install-win.doxygen... Generating docs for file Changelog.doxygen... Generating docs for file ExternalCode.doxygen... Generating docs for file FAQ.doxygen... Generating docs for file KnownDevBugs.doxygen... Generating docs for file Main.doxygen... Generating docs for file Modules.doxygen... Generating docs for file OpenMS_Tutorial_html.doxygen... Generating docs for file PyOpenMS.doxygen... Generating docs for file QuickStart.doxygen... Generating docs for file TOPP.doxygen... Generating docs for file TOPP_Tutorial_html.doxygen... Generating docs for file UTILS.doxygen... Generating docs for file OpenMS_Tutorial.doxygen... Generating docs for file TOPP_advanced.doxygen... Generating docs for file TOPP_concepts.doxygen... Generating docs for file TOPP_scripting.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPView_calling_topp.doxygen... Generating docs for file TOPPView_interface.doxygen... Generating docs for file INIFileEditor.cpp... Generating docs for file SwathWizard.cpp... Generating docs for file TOPPAS.cpp... Generating docs for file TOPPView.cpp... Generating docs for file INIFileEditorWindow.cpp... Generating docs for file QApplicationTOPP.cpp... Generating docs for file SwathWizardBase.cpp... Generating docs for file TOPPASBase.cpp... Generating docs for file TOPPViewBase.cpp... Generating docs for file BaselineFilter.cpp... Generating docs for file CometAdapter.cpp... Generating docs for file CompNovo.cpp... Generating docs for file CompNovoCID.cpp... Generating docs for file ConsensusID.cpp... Generating docs for file ConsensusMapNormalizer.cpp... Generating docs for file CruxAdapter.cpp... Generating docs for file DatabaseSuitability.cpp... Generating docs for file Decharger.cpp... Generating docs for file DTAExtractor.cpp... Generating docs for file EICExtractor.cpp... Generating docs for file ExecutePipeline.cpp... Generating docs for file ExternalCalibration.cpp... Generating docs for file FalseDiscoveryRate.cpp... Generating docs for file FeatureFinderCentroided.cpp... Generating docs for file FeatureFinderIdentification.cpp... Generating docs for file FeatureFinderIsotopeWavelet.cpp... Generating docs for file FeatureFinderMetabo.cpp... Generating docs for file FeatureFinderMRM.cpp... Generating docs for file FeatureFinderMultiplex.cpp... Generating docs for file FeatureLinkerBase.cpp... Generating docs for file FeatureLinkerLabeled.cpp... Generating docs for file FeatureLinkerUnlabeled.cpp... Generating docs for file FeatureLinkerUnlabeledKD.cpp... Generating docs for file FeatureLinkerUnlabeledQT.cpp... Generating docs for file FidoAdapter.cpp... Generating docs for file FileConverter.cpp... Generating docs for file FileFilter.cpp... Generating docs for file FileInfo.cpp... Generating docs for file FileMerger.cpp... Generating docs for file GenericWrapper.cpp... Generating docs for file GNPSExport.cpp... Generating docs for file HighResPrecursorMassCorrector.cpp... Generating docs for file IDConflictResolver.cpp... Generating docs for file IDFileConverter.cpp... Generating docs for file IDFilter.cpp... Generating docs for file IDMapper.cpp... Generating docs for file IDMerger.cpp... Generating docs for file IDPosteriorErrorProbability.cpp... Generating docs for file IDRipper.cpp... Generating docs for file IDRTCalibration.cpp... Generating docs for file InclusionExclusionListCreator.cpp... Generating docs for file InspectAdapter.cpp... Generating docs for file InternalCalibration.cpp... Generating docs for file IsobaricAnalyzer.cpp... Generating docs for file LuciphorAdapter.cpp... Generating docs for file MapAlignerIdentification.cpp... Generating docs for file MapAlignerPoseClustering.cpp... Generating docs for file MapAlignerSpectrum.cpp... Generating docs for file MapAlignerTreeGuided.cpp... Generating docs for file MapNormalizer.cpp... Generating docs for file MapRTTransformer.cpp... Generating docs for file MapStatistics.cpp... Generating docs for file MaRaClusterAdapter.cpp... Generating docs for file MascotAdapter.cpp... Generating docs for file MascotAdapterOnline.cpp... Generating docs for file MassTraceExtractor.cpp... Generating docs for file MRMMapper.cpp... Generating docs for file MSGFPlusAdapter.cpp... Generating docs for file MyriMatchAdapter.cpp... Generating docs for file MzTabExporter.cpp... Generating docs for file NoiseFilterGaussian.cpp... Generating docs for file NoiseFilterSGolay.cpp... Generating docs for file OMSSAAdapter.cpp... Generating docs for file OpenPepXL.cpp... Generating docs for file OpenPepXLLF.cpp... Generating docs for file OpenSwathAnalyzer.cpp... Generating docs for file OpenSwathAssayGenerator.cpp... Generating docs for file OpenSwathChromatogramExtractor.cpp... Generating docs for file OpenSwathConfidenceScoring.cpp... Generating docs for file OpenSwathDecoyGenerator.cpp... Generating docs for file OpenSwathFeatureXMLToTSV.cpp... Generating docs for file OpenSwathRTNormalizer.cpp... Generating docs for file PeakPickerHiRes.cpp... Generating docs for file PeakPickerWavelet.cpp... Generating docs for file PepNovoAdapter.cpp... Generating docs for file PeptideIndexer.cpp... Generating docs for file PercolatorAdapter.cpp... Generating docs for file PhosphoScoring.cpp... Generating docs for file PrecursorIonSelector.cpp... Generating docs for file PrecursorMassCorrector.cpp... Generating docs for file ProteinInference.cpp... Generating docs for file ProteinQuantifier.cpp... Generating docs for file ProteinResolver.cpp... Generating docs for file PTModel.cpp... Generating docs for file PTPredict.cpp... Generating docs for file QualityControl.cpp... Generating docs for file Resampler.cpp... Generating docs for file RTModel.cpp... Generating docs for file RTPredict.cpp... Generating docs for file SeedListGenerator.cpp... Generating docs for file SpecLibSearcher.cpp... Generating docs for file SpectraFilterBernNorm.cpp... Generating docs for file SpectraFilterMarkerMower.cpp... Generating docs for file SpectraFilterNLargest.cpp... Generating docs for file SpectraFilterNormalizer.cpp... Generating docs for file SpectraFilterParentPeakMower.cpp... Generating docs for file SpectraFilterScaler.cpp... Generating docs for file SpectraFilterSqrtMower.cpp... Generating docs for file SpectraFilterThresholdMower.cpp... Generating docs for file SpectraFilterWindowMower.cpp... Generating docs for file SpectraMerger.cpp... Generating docs for file TextExporter.cpp... Generating docs for file TOFCalibration.cpp... Generating docs for file XFDR.cpp... Generating docs for file XTandemAdapter.cpp... Generating docs for file AccurateMassSearch.cpp... Generating docs for file AssayGeneratorMetabo.cpp... Generating docs for file ClusterMassTraces.cpp... Generating docs for file ClusterMassTracesByPrecursor.cpp... Generating docs for file CVInspector.cpp... Generating docs for file DatabaseFilter.cpp... Generating docs for file DecoyDatabase.cpp... Generating docs for file DeMeanderize.cpp... Generating docs for file Digestor.cpp... Generating docs for file DigestorMotif.cpp... Generating docs for file Epifany.cpp... Generating docs for file ERPairFinder.cpp... Generating docs for file FeatureFinderMetaboIdent.cpp... Generating docs for file FeatureFinderSuperHirn.cpp... Generating docs for file FFEval.cpp... Generating docs for file FuzzyDiff.cpp... Generating docs for file IDDecoyProbability.cpp... Generating docs for file IDExtractor.cpp... Generating docs for file IDMassAccuracy.cpp... Generating docs for file IDScoreSwitcher.cpp... Generating docs for file IDSplitter.cpp... Generating docs for file ImageCreator.cpp... Generating docs for file INIUpdater.cpp... Generating docs for file LabeledEval.cpp... Generating docs for file MassCalculator.cpp... Generating docs for file MetaboliteAdductDecharger.cpp... Generating docs for file MetaboliteSpectralMatcher.cpp... Generating docs for file MetaProSIP.cpp... Generating docs for file MRMPairFinder.cpp... Generating docs for file MRMTransitionGroupPicker.cpp... Generating docs for file MSFraggerAdapter.cpp... Generating docs for file MSSimulator.cpp... Generating docs for file MSstatsConverter.cpp... Generating docs for file MultiplexResolver.cpp... Generating docs for file MzMLSplitter.cpp... Generating docs for file NovorAdapter.cpp... Generating docs for file NucleicAcidSearchEngine.cpp... Generating docs for file OpenMSInfo.cpp... Generating docs for file OpenSwathDIAPreScoring.cpp... Generating docs for file OpenSwathFileSplitter.cpp... Generating docs for file OpenSwathMzMLFileCacher.cpp... Generating docs for file OpenSwathRewriteToFeatureXML.cpp... Generating docs for file OpenSwathWorkflow.cpp... Generating docs for file PeakPickerIterative.cpp... GeneratinFontconfig error: No writable cache directories Fontconfig error: No writable cache directories g docs for file ProteomicsLFQ.cpp... Generating docs for file PSMFeatureExtractor.cpp... Generating docs for file QCCalculator.cpp... Generating docs for file QCEmbedder.cpp... Generating docs for file QCExporter.cpp... Generating docs for file QCExtractor.cpp... Generating docs for file QCImporter.cpp... Generating docs for file QCMerger.cpp... Generating docs for file QCShrinker.cpp... Generating docs for file RNADigestor.cpp... Generating docs for file RNAMassCalculator.cpp... Generating docs for file RNPxlSearch.cpp... Generating docs for file RNPxlXICFilter.cpp... Generating docs for file RTEvaluation.cpp... Generating docs for file SemanticValidator.cpp... Generating docs for file SequenceCoverageCalculator.cpp... Generating docs for file SimpleSearchEngine.cpp... Generating docs for file SiriusAdapter.cpp... Generating docs for file SpecLibCreator.cpp... Generating docs for file SpectraSTSearchAdapter.cpp... Generating docs for file StaticModification.cpp... Generating docs for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Generating docs for file TargetedFileConverter.cpp... Generating docs for file TICCalculator.cpp... Generating docs for file TransformationEvaluation.cpp... Generating docs for file XMLValidator.cpp... Generating page documentation... Generating docs for page tutorial... Generating docs for page TOPP_advanced... Generating docs for page TOPP_concepts... Generating docs for page TOPP_example_qualitycontrol... Generating docs for page TOPP_general... Generating docs for page TOPP_example_handling... Generating docs for page TOPP_example_signalprocessing... Generating docs for page TOPP_example_id... Generating docs for page TOPP_example_mapalignment... Generating docs for page TOPP_example_featuredetection... Generating docs for page TOPP_example_featuregrouping... Generating docs for page TOPP_example_calibration... Generating docs for page TOPP_example_ppp... Generating docs for page TOPP_example_convert... Generating docs for page TOPPAS_general... Generating docs for page TOPPAS_interface... Generating docs for page TOPPAS_examples... Generating docs for page TOPPView_baseline_reduction... Generating docs for page TOPPView_smoothing... Generating docs for page TOPPView_peakpicking... Generating docs for page TOPPView_feature_detection_centroided... Generating docs for page TOPPView_introduction... Generating docs for page TOPPView_views... Generating docs for page TOPPView_modes... Generating docs for page TOPPView_analysis... Generating docs for page TOPPView_editing... Generating docs for page TOPPView_hotkeys... Generating docs for page ChangeLog... Generating docs for page external_code... Generating docs for page FAQ... Generating docs for page known_dev_bugs... Generating docs for page OpenMS_tutorial... Generating docs for page pyOpenMS... Generating docs for page Quickstart... Generating docs for page TOPP_documentation... Generating docs for page TOPP_tutorial... Generating docs for page TOPPAS_tutorial... Generating docs for page UTILS_documentation... Generating docs for page install_linux_bin... Generating docs for page install_linux... Generating docs for page install_mac_bin... Generating docs for page install_mac... Generating docs for page install_win_bin... Generating docs for page install_win... Generating docs for page TOPP_INIFileEditor... Generating docs for page TOPP_SwathWizard... Generating docs for page TOPP_TOPPAS... Generating docs for page TOPP_TOPPView... Generating docs for page TOPP_BaselineFilter... Generating docs for page TOPP_CometAdapter... Generating docs for page TOPP_CompNovo... Generating docs for page TOPP_CompNovoCID... Generating docs for page TOPP_ConsensusID... Generating docs for page TOPP_ConsensusMapNormalizer... Generating docs for page TOPP_CruxAdapter... Generating docs for page TOPP_DatabaseSuitability... Generating docs for page TOPP_Decharger... Generating docs for page TOPP_DTAExtractor... Generating docs for page TOPP_EICExtractor... Generating docs for page TOPP_ExecutePipeline... Generating docs for page TOPP_ExternalCalibration... Generating docs for page TOPP_FalseDiscoveryRate... Generating docs for page TOPP_FeatureFinderCentroided... Generating docs for page TOPP_FeatureFinderIdentification... Generating docs for page TOPP_FeatureFinderIsotopeWavelet... Generating docs for page TOPP_FeatureFinderMetabo... Generating docs for page TOPP_FeatureFinderMRM... Generating docs for page TOPP_FeatureFinderMultiplex... Generating docs for page TOPP_FeatureLinkerBase... Generating docs for page TOPP_FeatureLinkerLabeled... Generating docs for page TOPP_FeatureLinkerUnlabeled... Generating docs for page TOPP_FeatureLinkerUnlabeledKD... Generating docs for page TOPP_FeatureLinkerUnlabeledQT... Generating docs for page TOPP_FidoAdapter... Generating docs for page TOPP_FileConverter... Generating docs for page TOPP_FileFilter... Generating docs for page TOPP_FileInfo... Generating docs for page TOPP_FileMerger... Generating docs for page TOPP_GenericWrapper... Generating docs for page TOPP_GNPSExport... Generating docs for page TOPP_HighResPrecursorMassCorrector... Generating docs for page TOPP_IDConflictResolver... Generating docs for page TOPP_IDFileConverter... Generating docs for page TOPP_IDFilter... Generating docs for page TOPP_IDMapper... Generating docs for page TOPP_IDMerger... Generating docs for page TOPP_IDPosteriorErrorProbability... Generating docs for page TOPP_IDRipper... Generating docs for page TOPP_IDRTCalibration... Generating docs for page TOPP_InclusionExclusionListCreator... Generating docs for page TOPP_InspectAdapter... Generating docs for page TOPP_InternalCalibration... Generating docs for page TOPP_IsobaricAnalyzer... Generating docs for page TOPP_LuciphorAdapter... Generating docs for page TOPP_MapAlignerIdentification... Generating docs for page TOPP_MapAlignerPoseClustering... Generating docs for page TOPP_MapAlignerSpectrum... Generating docs for page TOPP_MapAlignerTreeGuided... Generating docs for page TOPP_MapNormalizer... Generating docs for page TOPP_MapRTTransformer... Generating docs for page TOPP_MapStatistics... Generating docs for page TOPP_MaRaClusterAdapter... Generating docs for page TOPP_MascotAdapter... Generating docs for page TOPP_MascotAdapterOnline... Generating docs for page TOPP_MassTraceExtractor... Generating docs for page TOPP_MRMMapper... Generating docs for page TOPP_MSGFPlusAdapter... Generating docs for page TOPP_MyriMatchAdapter... Generating docs for page TOPP_MzTabExporter... Generating docs for page TOPP_NoiseFilterGaussian... Generating docs for page TOPP_NoiseFilterSGolay... Generating docs for page TOPP_OMSSAAdapter... Generating docs for page TOPP_OpenPepXL... Generating docs for page TOPP_OpenPepXLLF... Generating docs for page TOPP_OpenSwathAnalyzer... Generating docs for page TOPP_OpenSwathAssayGenerator... Generating docs for page TOPP_OpenSwathChromatogramExtractor... Generating docs for page TOPP_OpenSwathConfidenceScoring... Generating docs for page TOPP_OpenSwathDecoyGenerator... Generating docs for page TOPP_OpenSwathFeatureXMLToTSV... Generating docs for page TOPP_OpenSwathRTNormalizer... Generating docs for page TOPP_PeakPickerHiRes... Generating docs for page TOPP_PeakPickerWavelet... Generating docs for page TOPP_PepNovoAdapter... Generating docs for page TOPP_PeptideIndexer... Generating docs for page TOPP_PercolatorAdapter... Generating docs for page TOPP_PhosphoScoring... Generating docs for page TOPP_PrecursorIonSelector... Generating docs for page TOPP_PrecursorMassCorrector... Generating docs for page TOPP_ProteinInference... Generating docs for page TOPP_ProteinQuantifier... Generating docs for page TOPP_ProteinResolver... Generating docs for page TOPP_PTModel... Generating docs for page TOPP_PTPredict... Generating docs for page TOPP_QualityControl... Generating docs for page TOPP_Resampler... Generating docs for page TOPP_RTModel... Generating docs for page TOPP_RTPredict... Generating docs for page TOPP_SeedListGenerator... Generating docs for page TOPP_SpecLibSearcher... Generating docs for page TOPP_SpectraFilterBernNorm... Generating docs for page TOPP_SpectraFilterMarkerMower... Generating docs for page TOPP_SpectraFilterNLargest... Generating docs for page TOPP_SpectraFilterNormalizer... Generating docs for page TOPP_SpectraFilterParentPeakMower... Generating docs for page TOPP_SpectraFilterScaler... Generating docs for page TOPP_SpectraFilterSqrtMower... Generating docs for page TOPP_SpectraFilterThresholdMower... Generating docs for page TOPP_SpectraFilterWindowMower... Generating docs for page TOPP_SpectraMerger... Generating docs for page TOPP_TextExporter... Generating docs for page TOPP_TOFCalibration... Generating docs for page TOPP_XFDR... Generating docs for page TOPP_XTandemAdapter... Generating docs for page UTILS_AccurateMassSearch... Generating docs for page UTILS_AssayGeneratorMetabo... Generating docs for page UTILS_ClusterMassTraces... Generating docs for page UTILS_ClusterMassTracesByPrecursor... Generating docs for page UTILS_CVInspector... Generating docs for page UTILS_DatabaseFilter... Generating docs for page UTILS_DecoyDatabase... Generating docs for page UTILS_DeMeanderize... Generating docs for page UTILS_Digestor... Generating docs for page UTILS_DigestorMotif... Generating docs for page UTILS_Epifany... Generating docs for page UTILS_ERPairFinder... Generating docs for page UTILS_FeatureFinderMetaboIdent... Generating docs for page UTILS_FeatureFinderSuperHirn... Generating docs for page UTILS_FFEval... Generating docs for page UTILS_FuzzyDiff... Generating docs for page UTILS_IDDecoyProbability... Generating docs for page UTILS_IDExtractor... Generating docs for page UTILS_IDMassAccuracy... Generating docs for page UTILS_IDScoreSwitcher... Generating docs for page UTILS_IDSplitter... Generating docs for page UTILS_ImageCreator... Generating docs for page UTILS_INIUpdater... Generating docs for page UTILS_LabeledEval... Generating docs for page UTILS_MassCalculator... Generating docs for page UTILS_MetaboliteAdductDecharger... Generating docs for page UTILS_MetaboliteSpectralMatcher... Generating docs for page UTILS_MetaProSIP... Generating docs for page UTILS_MRMPairFinder... Generating docs for page UTILS_MRMTransitionGroupPicker... Generating docs for page UTILS_MSFraggerAdapter... Generating docs for page UTILS_MSSimulator... Generating docs for page UTILS_MSstatsConverter... Generating docs for page UTILS_MultiplexResolver... Generating docs for page UTILS_MzMLSplitter... Generating docs for page UTILS_NovorAdapter... Generating docs for page UTILS_NucleicAcidSearchEngine... Generating docs for page UTILS_OpenSwathDIAPreScoring... Generating docs for page UTILS_OpenSwathFileSplitter... Generating docs for page UTILS_OpenSwathMzMLFileCacher... Generating docs for page UTILS_OpenSwathRewriteToFeatureXML... Generating docs for page UTILS_OpenSwathWorkflow... Generating docs for page UTILS_PeakPickerIterative... Generating docs for page UTILS_ProteomicsLFQ... Generating docs for page UTILS_PSMFeatureExtractor... Generating docs for page UTILS_QCCalculator... Generating docs for page UTILS_QCEmbedder... Generating docs for page UTILS_QCExporter... Generating docs for page UTILS_QCExtractor... Generating docs for page UTILS_QCImporter... Generating docs for page UTILS_QCMerger... Generating docs for page UTILS_QCShrinker... Generating docs for page UTILS_RNADigestor... Generating docs for page UTILS_RNAMassCalculator... Generating docs for page UTILS_RNPxlSearch... Generating docs for page UTILS_RNPxlXICFilter... Generating docs for page UTILS_RTEvaluation... Generating docs for page UTILS_SemanticValidator... Generating docs for page UTILS_SequenceCoverageCalculator... Generating docs for page UTILS_SimpleSearchEngine... Generating docs for page UTILS_SiriusAdapter... Generating docs for page UTILS_SpecLibCreator... Generating docs for page UTILS_SpectraSTSearchAdapter... Generating docs for page UTILS_StaticModification... Generating docs for page UTILS_SvmTheoreticalSpectrumGeneratorTrainer... Generating docs for page UTILS_TargetedFileConverter... Generating docs for page UTILS_TICCalculator... Generating docs for page UTILS_TransformationEvaluatioFontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories n... Generating docs for page UTILS_XMLValidator... Generating docs for page todo... Generating docs for page experimental... Generating docs for page deprecated... Generating docs for page bug... Generating docs for page improvement... Generating group documentation... Generating dependency graph for group Math Generating dependency graph for group MathFunctionsStatistics Generating dependency graph for group MathFunctionsMisc Generating dependency graph for group Format Generating dependency graph for group FileIO Generating dependency graph for group Filtering Generating dependency graph for group SpectraPreprocessers Generating dependency graph for group SpectraFilter Generating dependency graph for group PeakMarker Generating dependency graph for group Analysis Generating dependency graph for group SignalProcessing Generating dependency graph for group PeakPicking Generating dependency graph for group FeatureFinder Generating dependency graph for group MapAlignment Generating dependency graph for group FeatureGrouping Generating dependency graph for group Analysis_ID Generating dependency graph for group SpectraClustering Generating dependency graph for group Visual Generating dependency graph for group SpectrumWidgets Generating dependency graph for group TOPPView_elements Generating dependency graph for group TOPPAS_elements Generating dependency graph for group Dialogs Generating class documentation... Generating docs for compound NucleicAcidSearchEngine... Generating docs for nested compound NucleicAcidSearchEngine::HasInvalidLength... Generating docs for nested compound NucleicAcidSearchEngine::PrecursorInfo... Generating docs for compound TOPPBase... Generating docs for compound TOPPGNPSExport... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace OpenMS Generating graph info page... Generating directory documentation... Generating dependency graph for directory doxygen Generating dependency graph for directory install Generating dependency graph for directory OpenMS_tutorial Generating dependency graph for directory public Generating dependency graph for directory TOPP_tutorial Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 25 parallel threads... 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error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories 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directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ning dot for graph 43/224 Running dot for graph 44/224 Running dot for graph 45/224 Running dot for graph 46/224 Running dot for graph 47/224 Running dot for graph 48/224 Running dot for graph 49/224 Running dot for graph 50/224 Running dot for graph 51/224 Running dot for graph 52/224 Running dot for graph 53/224 Running dot for graph 54/224 Running dot for graph 55/224 Running dot for graph 56/224 Running dot for graph 57/224 Running dot 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Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories graph 181/224 Running dot for graph 182/224 Running dot for 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216/224 Running dot for graph 217/224 Running dot for graph 218/224 Running dot for graph 219/224 Running dot for graph 220/224 Running dot for graph 221/224 Running dot for graph 222/224 Running dot for graph 223/224 Running dot for graph 224/224 Patching output file 1/440 Patching output file 2/440 Patching output file 3/440 Patching output file 4/440 Patching output file 5/440 Patching output file 6/440 Patching output file 7/440 Patching output file 8/440 Patching output file 9/440 Patching output file 10/440 Patching output file 11/440 Patching output file 12/440 Patching output file 13/440 Patching output file 14/440 Patching output file 15/440 Patching output file 16/440 Patching output file 17/440 Patching output file 18/440 Patching output file 19/440 Patching output file 20/440 Patching output file 21/440 Patching output file 22/440 Patching output file 23/440 Patching output file 24/440 Patching output file 25/440 Patching output file 26/440 Patching output file 27/440 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Patching output file 271/440 Patching output file 272/440 Patching output file 273/440 Patching output file 274/440 Patching output file 275/440 Patching output file 276/440 Patching output file 277/440 Patching output file 278/440 Patching output file 279/440 Patching output file 280/440 Patching output file 281/440 Patching output file 282/440 Patching output file 283/440 Patching output file 284/440 Patching output file 285/440 Patching output file 286/440 Patching output file 287/440 Patching output file 288/440 Patching output file 289/440 Patching output file 290/440 Patching output file 291/440 Patching output file 292/440 Patching output file 293/440 Patching output file 294/440 Patching output file 295/440 Patching output file 296/440 Patching output file 297/440 Patching output file 298/440 Patching output file 299/440 Patching output file 300/440 Patching output file 301/440 Patching output file 302/440 Patching output file 303/440 Patching output file 304/440 Patching output file 305/440 Patching output file 306/440 Patching output file 307/440 Patching output file 308/440 Patching output file 309/440 Patching output file 310/440 Patching output file 311/440 Patching output file 312/440 Patching output file 313/440 Patching output file 314/440 Patching output file 315/440 Patching output file 316/440 Patching output file 317/440 Patching output file 318/440 Patching output file 319/440 Patching output file 320/440 Patching output file 321/440 Patching output file 322/440 Patching output file 323/440 Patching output file 324/440 Patching output file 325/440 Patching output file 326/440 Patching output file 327/440 Patching output file 328/440 Patching output file 329/440 Patching output file 330/440 Patching output file 331/440 Patching output file 332/440 Patching output file 333/440 Patching output file 334/440 Patching output file 335/440 Patching output file 336/440 Patching output file 337/440 Patching output file 338/440 Patching output file 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Patching output file 374/440 Patching output file 375/440 Patching output file 376/440 Patching output file 377/440 Patching output file 378/440 Patching output file 379/440 Patching output file 380/440 Patching output file 381/440 Patching output file 382/440 Patching output file 383/440 Patching output file 384/440 Patching output file 385/440 Patching output file 386/440 Patching output file 387/440 Patching output file 388/440 Patching output file 389/440 Patching output file 390/440 Patching output file 391/440 Patching output file 392/440 Patching output file 393/440 Patching output file 394/440 Patching output file 395/440 Patching output file 396/440 Patching output file 397/440 Patching output file 398/440 Patching output file 399/440 Patching output file 400/440 Patching output file 401/440 Patching output file 402/440 Patching output file 403/440 Patching output file 404/440 Patching output file 405/440 Patching output file 406/440 Patching output file 407/440 Patching output file 408/440 Patching output file 409/440 Patching output file 410/440 Patching output file 411/440 Patching output file 412/440 Patching output file 413/440 Patching output file 414/440 Patching output file 415/440 Patching output file 416/440 Patching output file 417/440 Patching output file 418/440 Patching output file 419/440 Patching output file 420/440 Patching output file 421/440 Patching output file 422/440 Patching output file 423/440 Patching output file 424/440 Patching output file 425/440 Patching output file 426/440 Patching output file 427/440 Patching output file 428/440 Patching output file 429/440 Patching output file 430/440 Patching output file 431/440 Patching output file 432/440 Patching output file 433/440 Patching output file 434/440 Patching output file 435/440 Patching output file 436/440 Patching output file 437/440 Patching output file 438/440 Patching output file 439/440 Patching output file 440/440 type lookup cache used 62166/65536 hits=240509 misses=62324 symbol lookup cache used 29239/65536 hits=195776 misses=29239 finished... cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E copy /build/reproducible-path/openms-2.6.0+cleaned1/doc/index.html index.html cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The documentation has been successfully created." The documentation has been successfully created. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "You can now open 'doc/index.html' in a web browser." You can now open 'doc/index.html' in a web browser. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off." We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "If you want the full doc, either execute cmake --build . --target doc manually" If you want the full doc, either execute cmake --build . --target doc manually cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "or rerun cmake with -DHAS_XSERVER=On." or rerun cmake with -DHAS_XSERVER=On. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target doc_minimal make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[2]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' # Run the test suite # VERBOSE=1 /usr/bin/make -C /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu test # Prepare the topp.1 man page with all the one-line description got # from calling individually each program in /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin with # --help switch. The newly built libs need be in the path so that the # binaries can execute. Same for the shared data path, because the # binaries need it to run. Note the calling in sh ./ with the script # shell being itself executable, otherwise git-buildpackage would # fail. cd /build/reproducible-path/openms-2.6.0+cleaned1/debian && \ PATH=/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games \ OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS/ \ sh ./binaries-extract-one-line-man-desc.sh /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin /build/reproducible-path/openms-2.6.0+cleaned1/debian ./binaries-extract-one-line-man-desc.sh: 6: cd: can't cd to /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin #VERBOSE=1 LD_LIBRARY_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/lib/:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/lib/i386-linux-gnu:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/lib/i386-linux-gnu:/usr/lib/libeatmydata\ #PATH=/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games\ #OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS/ \ #cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/doc/doxygen && doxygen Doxyfile # There are two files that we do not want to ship because # they exist in their own Debian packages. rm -f /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/usr/share/doc/html/jquery.js make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/libopenms-dev.debhelper.log debian/libopenms2.6.0.debhelper.log debian/openms-common.debhelper.log debian/openms-doc.debhelper.log debian/openms.debhelper.log debian/topp.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' make[1]: 'override_dh_auto_test' is up to date. make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake --no-parallel dh_testroot -O--buildsystem=cmake -O--no-parallel dh_prep -O--buildsystem=cmake -O--no-parallel rm -f -- debian/libopenms2.6.0.substvars debian/libopenms-dev.substvars debian/topp.substvars debian/openms-common.substvars debian/openms-doc.substvars debian/openms.substvars rm -fr -- debian/.debhelper/generated/libopenms2.6.0/ debian/libopenms2.6.0/ debian/tmp/ debian/.debhelper/generated/libopenms-dev/ debian/libopenms-dev/ debian/.debhelper/generated/topp/ debian/topp/ debian/.debhelper/generated/openms-common/ debian/openms-common/ debian/.debhelper/generated/openms-doc/ debian/openms-doc/ debian/.debhelper/generated/openms/ debian/openms/ dh_installdirs -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' VERBOSE=1 \ OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS/ \ dh_auto_install install -m0755 -d /build/reproducible-path/openms-2.6.0\+cleaned1/debian/tmp cd obj-i686-linux-gnu && make -j1 install DESTDIR=/build/reproducible-path/openms-2.6.0\+cleaned1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 53%] Built target OpenMS make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/superhirn/CMakeFiles/SuperHirn.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 55%] Built target SuperHirn make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 55%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 55%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target OpenMS_GUI make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target INIFileEditor_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/INIFileEditor_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIFileEditor_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target INIFileEditor_autogen make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIFileEditor make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target INIFileEditor make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target SwathWizard_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/SwathWizard_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SwathWizard_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target SwathWizard_autogen make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SwathWizard make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target SwathWizard make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target TOPPAS_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPAS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPAS_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target TOPPAS_autogen make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPAS make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPAS make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPView_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPView_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPView_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPView_autogen make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPView make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPView make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/BaselineFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/BaselineFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target BaselineFilter make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CometAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CometAdapter make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CompNovo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CompNovo make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CompNovoCID.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CompNovoCID make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusID.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ConsensusID make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ConsensusMapNormalizer make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CruxAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CruxAdapter make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/DatabaseSuitability.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target DatabaseSuitability make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/Decharger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target Decharger make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/DTAExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target DTAExtractor make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/EICExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target EICExtractor make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ExternalCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ExternalCalibration make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FalseDiscoveryRate.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FalseDiscoveryRate make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderCentroided.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderCentroided make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIdentification.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderIdentification make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderIsotopeWavelet make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMetabo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderMetabo make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMRM.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderMRM make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderMultiplex make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureLinkerLabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureLinkerUnlabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureLinkerUnlabeledKD make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FeatureLinkerUnlabeledQT make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FidoAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FidoAdapter make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileConverter make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileFilter make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileInfo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileInfo make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileMerger make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/GenericWrapper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target GenericWrapper make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/GNPSExport.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target GNPSExport make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target HighResPrecursorMassCorrector make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDConflictResolver.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target IDConflictResolver make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDFileConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDFileConverter make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDFilter make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDMapper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDMapper make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDMerger make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDPosteriorErrorProbability make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDRipper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target IDRipper make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDRTCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target IDRTCalibration make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target InclusionExclusionListCreator make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/InspectAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target InspectAdapter make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/InternalCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target InternalCalibration make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IsobaricAnalyzer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target IsobaricAnalyzer make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/LuciphorAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target LuciphorAdapter make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerIdentification.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerIdentification make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerPoseClustering make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerSpectrum.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerSpectrum make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerTreeGuided make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapNormalizer make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapRTTransformer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MapRTTransformer make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapStatistics.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MapStatistics make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MaRaClusterAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MaRaClusterAdapter make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MascotAdapter make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapterOnline.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MascotAdapterOnline make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MassTraceExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MassTraceExtractor make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MRMMapper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MRMMapper make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MSGFPlusAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MSGFPlusAdapter make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MyriMatchAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MyriMatchAdapter make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MzTabExporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MzTabExporter make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterGaussian.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target NoiseFilterGaussian make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterSGolay.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target NoiseFilterSGolay make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OMSSAAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OMSSAAdapter make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXL.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenPepXL make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXLLF.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenPepXLLF make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenSwathAnalyzer make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenSwathAssayGenerator make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathChromatogramExtractor make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathConfidenceScoring make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathDecoyGenerator make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathFeatureXMLToTSV make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target OpenSwathRTNormalizer make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerHiRes.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PeakPickerHiRes make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerWavelet.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PeakPickerWavelet make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PepNovoAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PepNovoAdapter make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PeptideIndexer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PeptideIndexer make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PercolatorAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PercolatorAdapter make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PhosphoScoring.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PhosphoScoring make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorIonSelector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PrecursorIonSelector make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorMassCorrector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PrecursorMassCorrector make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ProteinInference.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target ProteinInference make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ProteinQuantifier.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target ProteinQuantifier make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ProteinResolver.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target ProteinResolver make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PTModel.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PTModel make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PTPredict.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PTPredict make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/QualityControl.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target QualityControl make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/RTModel.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target RTModel make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/RTPredict.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target RTPredict make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SeedListGenerator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SeedListGenerator make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpecLibSearcher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpecLibSearcher make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterBernNorm make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterMarkerMower make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNLargest.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterNLargest make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterNormalizer make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterParentPeakMower make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterScaler.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterScaler make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterSqrtMower make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterThresholdMower make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterWindowMower make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraMerger make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/TextExporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target TextExporter make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/TOFCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target TOFCalibration make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/XFDR.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target XFDR make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/XTandemAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target XTandemAdapter make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ExecutePipeline.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ExecutePipeline make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Resampler.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/Resampler.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target Resampler make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/AccurateMassSearch.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AccurateMassSearch make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AssayGeneratorMetabo make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTraces.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTraces make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTracesByPrecursor make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/CVInspector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target CVInspector make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DatabaseFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DatabaseFilter make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DecoyDatabase.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DecoyDatabase make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DeMeanderize.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DeMeanderize make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/Digestor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Digestor make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DigestorMotif.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target DigestorMotif make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/Epifany.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Epifany make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ERPairFinder.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target ERPairFinder make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target FeatureFinderMetaboIdent make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target FeatureFinderSuperHirn make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FFEval.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target FFEval make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FuzzyDiff.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target FuzzyDiff make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDDecoyProbability.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDDecoyProbability make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDExtractor make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDMassAccuracy.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDMassAccuracy make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDScoreSwitcher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDScoreSwitcher make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDSplitter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDSplitter make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/LabeledEval.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target LabeledEval make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MassCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MassCalculator make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MetaboliteAdductDecharger make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MetaboliteSpectralMatcher make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MetaProSIP.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MetaProSIP make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MRMPairFinder.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MRMPairFinder make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MSFraggerAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MSFraggerAdapter make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MSSimulator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MSSimulator make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MSstatsConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target MSstatsConverter make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MultiplexResolver.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target MultiplexResolver make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MzMLSplitter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target MzMLSplitter make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/NovorAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NovorAdapter make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NucleicAcidSearchEngine make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenMSInfo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenMSInfo make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/PeakPickerIterative.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target PeakPickerIterative make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/PSMFeatureExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target PSMFeatureExtractor make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target QCCalculator make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCEmbedder.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCEmbedder make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCExporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCExporter make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCExtractor make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCImporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCImporter make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCMerger make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCShrinker.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCShrinker make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ProteomicsLFQ.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target ProteomicsLFQ make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNADigestor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNADigestor make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNAMassCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNAMassCalculator make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlXICFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNPxlXICFilter make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlSearch.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNPxlSearch make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RTEvaluation.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RTEvaluation make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SemanticValidator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SemanticValidator make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SequenceCoverageCalculator make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SimpleSearchEngine.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SimpleSearchEngine make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SiriusAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SiriusAdapter make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SpecLibCreator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target SpecLibCreator make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target SpectraSTSearchAdapter make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/StaticModification.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target StaticModification make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target SvmTheoreticalSpectrumGeneratorTrainer make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/TICCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target TICCalculator make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/TransformationEvaluation.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target TransformationEvaluation make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/XMLValidator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target XMLValidator make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/TargetedFileConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target TargetedFileConverter make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathDIAPreScoring make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathMzMLFileCacher make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathWorkflow.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathWorkflow make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathFileSplitter make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathRewriteToFeatureXML make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MRMTransitionGroupPicker make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ImageCreator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ImageCreator make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/INIUpdater.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target INIUpdater make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target UTILS make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target TOPP make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/CMakeFiles/doc_minimal.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Build the doxygen documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating html documentation without class/TOPP/UTILS documentation" Creating html documentation without class/TOPP/UTILS documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory html cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /usr/bin/doxygen doxygen/Doxyfile_noclass warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 115 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'TCL_SUBST' at line 284 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1147 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1283 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1575 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1877 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1893 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1967 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 2072 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2260 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2302 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2309 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2533 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! Doxygen version used: 1.9.8 Searching for include files... Searching for example files... 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Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Searching for tag less structs... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating images for formulas in HTML... Generating image form_0.png for formula Generating image form_1.png for formula Generating image form_2.png for formula Generating image form_3.png for formula Generating image form_4.png for formula Generating image form_5.png for formula Generating image form_6.png for formula Generating image form_7.png for formula Generating image form_8.png for formula Generating image form_9.png for formula Generating image form_0_dark.png for formula Generating image form_1_dark.png for formula Generating image form_2_dark.png for formula Generating image form_3_dark.png for formula Generating image form_4_dark.png for formula Generating image form_5_dark.png for formula Generating image form_6_dark.png for formula Generating image form_7_dark.png for formula Generating image form_8_dark.png for formula Generating image form_9_dark.png for formula Generating example documentation... Generating file sources... Parsing code for file common-cmake-parameters.doxygen... Parsing code for file install-linux-bin.doxygen... Parsing code for file install-linux.doxygen... Parsing code for file install-macs-bin.doxygen... Parsing code for file install-macs.doxygen... Parsing code for file install-win-bin.doxygen... Parsing code for file install-win.doxygen... Parsing code for file Changelog.doxygen... Parsing code for file ExternalCode.doxygen... Parsing code for file FAQ.doxygen... Parsing code for file KnownDevBugs.doxygen... Parsing code for file Main.doxygen... Parsing code for file Modules.doxygen... Parsing code for file OpenMS_Tutorial_html.doxygen... Parsing code for file PyOpenMS.doxygen... Parsing code for file QuickStart.doxygen... Parsing code for file TOPP.doxygen... Parsing code for file TOPP_Tutorial_html.doxygen... Parsing code for file UTILS.doxygen... Parsing code for file OpenMS_Tutorial.doxygen... Parsing code for file TOPP_advanced.doxygen... Parsing code for file TOPP_concepts.doxygen... Parsing code for file TOPP_scripting.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPView_calling_topp.doxygen... Parsing code for file TOPPView_interface.doxygen... Parsing code for file INIFileEditor.cpp... Parsing code for file SwathWizard.cpp... Parsing code for file TOPPAS.cpp... Parsing code for file TOPPView.cpp... Parsing code for file INIFileEditorWindow.cpp... Parsing code for file QApplicationTOPP.cpp... Parsing code for file SwathWizardBase.cpp... Parsing code for file TOPPASBase.cpp... Parsing code for file TOPPViewBase.cpp... Parsing code for file BaselineFilter.cpp... Parsing code for file CometAdapter.cpp... Parsing code for file CompNovo.cpp... Parsing code for file CompNovoCID.cpp... Parsing code for file ConsensusID.cpp... Parsing code for file ConsensusMapNormalizer.cpp... Parsing code for file CruxAdapter.cpp... Parsing code for file DatabaseSuitability.cpp... Parsing code for file Decharger.cpp... Parsing code for file DTAExtractor.cpp... Parsing code for file EICExtractor.cpp... Parsing code for file ExecutePipeline.cpp... Parsing code for file ExternalCalibration.cpp... Parsing code for file FalseDiscoveryRate.cpp... Parsing code for file FeatureFinderCentroided.cpp... Parsing code for file FeatureFinderIdentification.cpp... Parsing code for file FeatureFinderIsotopeWavelet.cpp... Parsing code for file FeatureFinderMetabo.cpp... Parsing code for file FeatureFinderMRM.cpp... Parsing code for file FeatureFinderMultiplex.cpp... Generating code for file FeatureLinkerBase.cpp... Parsing code for file FeatureLinkerLabeled.cpp... Parsing code for file FeatureLinkerUnlabeled.cpp... Parsing code for file FeatureLinkerUnlabeledKD.cpp... Parsing code for file FeatureLinkerUnlabeledQT.cpp... Parsing code for file FidoAdapter.cpp... Parsing code for file FileConverter.cpp... Parsing code for file FileFilter.cpp... Parsing code for file FileInfo.cpp... Parsing code for file FileMerger.cpp... 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Parsing code for file MapRTTransformer.cpp... Parsing code for file MapStatistics.cpp... Parsing code for file MaRaClusterAdapter.cpp... Parsing code for file MascotAdapter.cpp... Parsing code for file MascotAdapterOnline.cpp... Parsing code for file MassTraceExtractor.cpp... Parsing code for file MRMMapper.cpp... Parsing code for file MSGFPlusAdapter.cpp... Parsing code for file MyriMatchAdapter.cpp... Parsing code for file MzTabExporter.cpp... Parsing code for file NoiseFilterGaussian.cpp... Parsing code for file NoiseFilterSGolay.cpp... Parsing code for file OMSSAAdapter.cpp... Parsing code for file OpenPepXL.cpp... Parsing code for file OpenPepXLLF.cpp... Parsing code for file OpenSwathAnalyzer.cpp... Parsing code for file OpenSwathAssayGenerator.cpp... Parsing code for file OpenSwathChromatogramExtractor.cpp... Parsing code for file OpenSwathConfidenceScoring.cpp... Parsing code for file OpenSwathDecoyGenerator.cpp... Parsing code for file OpenSwathFeatureXMLToTSV.cpp... 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Parsing code for file MSSimulator.cpp... Parsing code for file MSstatsConverter.cpp... Parsing code for file MultiplexResolver.cpp... Parsing code for file MzMLSplitter.cpp... Parsing code for file NovorAdapter.cpp... Parsing code for file NucleicAcidSearchEngine.cpp... Parsing code for file OpenMSInfo.cpp... Parsing code for file OpenSwathDIAPreScoring.cpp... Parsing code for file OpenSwathFileSplitter.cpp... Parsing code for file OpenSwathMzMLFileCacher.cpp... Parsing code for file OpenSwathRewriteToFeatureXML.cpp... Parsing code for file OpenSwathWorkflow.cpp... Parsing code for file PeakPickerIterative.cpp... Parsing code for file ProteomicsLFQ.cpp... Parsing code for file PSMFeatureExtractor.cpp... Parsing code for file QCCalculator.cpp... Parsing code for file QCEmbedder.cpp... Parsing code for file QCExporter.cpp... Parsing code for file QCExtractor.cpp... Parsing code for file QCImporter.cpp... Parsing code for file QCMerger.cpp... Parsing code for file QCShrinker.cpp... 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Generating docs for file MapAlignerIdentification.cpp... Generating docs for file MapAlignerPoseClustering.cpp... Generating docs for file MapAlignerSpectrum.cpp... Generating docs for file MapAlignerTreeGuided.cpp... Generating docs for file MapNormalizer.cpp... Generating docs for file MapRTTransformer.cpp... Generating docs for file MapStatistics.cpp... Generating docs for file MaRaClusterAdapter.cpp... Generating docs for file MascotAdapter.cpp... Generating docs for file MascotAdapterOnline.cpp... Generating docs for file MassTraceExtractor.cpp... Generating docs for file MRMMapper.cpp... Generating docs for file MSGFPlusAdapter.cpp... Generating docs for file MyriMatchAdapter.cpp... Generating docs for file MzTabExporter.cpp... Generating docs for file NoiseFilterGaussian.cpp... Generating docs for file NoiseFilterSGolay.cpp... Generating docs for file OMSSAAdapter.cpp... Generating docs for file OpenPepXL.cpp... Generating docs for file OpenPepXLLF.cpp... 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Generating docs for file XTandemAdapter.cpp... Generating docs for file AccurateMassSearch.cpp... Generating docs for file AssayGeneratorMetabo.cpp... Generating docs for file ClusterMassTraces.cpp... Generating docs for file ClusterMassTracesByPrecursor.cpp... Generating docs for file CVInspector.cpp... Generating docs for file DatabaseFilter.cpp... Generating docs for file DecoyDatabase.cpp... Generating docs for file DeMeanderize.cpp... Generating docs for file Digestor.cpp... Generating docs for file DigestorMotif.cpp... Generating docs for file Epifany.cpp... Generating docs for file ERPairFinder.cpp... Generating docs for file FeatureFinderMetaboIdent.cpp... Generating docs for file FeatureFinderSuperHirn.cpp... Generating docs for file FFEval.cpp... Generating docs for file FuzzyDiff.cpp... Generating docs for file IDDecoyProbability.cpp... Generating docs for file IDExtractor.cpp... Generating docs for file IDMassAccuracy.cpp... Generating docs for file IDScoreSwitcher.cpp... Generating docs for file IDSplitter.cpp... Generating docs for file ImageCreator.cpp... Generating docs for file INIUpdater.cpp... Generating docs for file LabeledEval.cpp... Generating docs for file MassCalculator.cpp... Generating docs for file MetaboliteAdductDecharger.cpp... Generating docs for file MetaboliteSpectralMatcher.cpp... Generating docs for file MetaProSIP.cpp... Generating docs for file MRMPairFinder.cpp... Generating docs for file MRMTransitionGroupPicker.cpp... Generating docs for file MSFraggerAdapter.cpp... Generating docs for file MSSimulator.cpp... Generating docs for file MSstatsConverter.cpp... Generating docs for file MultiplexResolver.cpp... Generating docs for file MzMLSplitter.cpp... Generating docs for file NovorAdapter.cpp... Generating docs for file NucleicAcidSearchEngine.cpp... Generating docs for file OpenMSInfo.cpp... Generating docs for file OpenSwathDIAPreScoring.cpp... Generating docs for file OpenSwathFileSplitter.cpp... Generating docs for file OpenSwathMzMLFileCacher.cpp... Generating docs for file OpenSwathRewriteToFeatureXML.cpp... Generating docs for file OpenSwathWorkflow.cpp... Generating docs for file PeakPickerIterative.cpp... Generating docs for file ProteomicsLFQ.cpp... Generating docs for file PSMFeatureExtractor.cpp... Generating docs for file QCCalculator.cpp... Generating docs for file QCEmbedder.cpp... Generating docs for file QCExporter.cpp... Generating docs for file QCExtractor.cpp... Generating docs for file QCImporter.cpp... Generating docs for file QCMerger.cpp... Generating docs for file QCShrinker.cpp... Generating docs for file RNADigestor.cpp... Generating docs for file RNAMassCalculator.cpp... Generating docs for file RNPxlSearch.cpp... Generating docs for file RNPxlXICFilter.cpp... Generating docs for file RTEvaluation.cpp... Generating docs for file SemanticValidator.cpp... Generating docs for file SequenceCoverageCalculator.cpp... Generating docs for file SimpleSearchEngine.cpp... Generating docs for file SiriusAdapter.cpp... Generating docs for file SpecLibCreator.cpp... Generating docs for file SpectraSTSearchAdapter.cpp... Generating docs for file StaticModification.cpp... Generating docs for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Generating docs for file TargetedFileConverter.cpp... Generating docs for file TICCalculator.cpp... Generating docs for file TransformationEvaluation.cpp... Generating docs for file XMLValidator.cpp... Generating page documentation... Generating docs for page tutorial... Generating docs for page TOPP_advanced... Generating docs for page TOPP_concepts... Generating docs for page TOPP_example_qualitycontrol... Generating docs for page TOPP_general... Generating docs for page TOPP_example_handling... Generating docs for page TOPP_example_signalprocessing... Generating docs for page TOPP_example_id... Generating docs for page TOPP_example_mapalignment... 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Generating docs for page UTILS_RNPxlSearch... Generating docs for page UTILS_RNPxlXICFilter... Generating docs for page UTILS_RTEvaluation... Generating docs for page UTILS_SemanticValidator... Generating docs for page UTILS_SequenceCoverageCalculator... Generating docs for page UTILS_SimpleSearchEngine... Generating docs for page UTILS_SiriusAdapter... Generating docs for page UTILS_SpecLibCreator... Generating docs for page UTILS_SpectraSTSearchAdapter... Generating docs for page UTILS_StaticModification... Generating docs for page UTILS_SvmTheoreticalSpectrumGeneratorTrainer... Generating docs for page UTILS_TargetedFileConverter... Generating docs for page UTILS_TICCalculator... Generating docs for page UTILS_TransformationEvaluation... Generating docs for page UTILS_XMLValidator... Generating docs for page todo... Generating docs for page experimental... Generating docs for page deprecated... Generating docs for page bug... Generating docs for page improvement... Generating group documentation... Generating dependency graph for group Math Generating dependency graph for group MathFunctionsStatistics Generating dependency graph for group MathFunctionsMisc Generating dependency graph for group Format Generating dependency graph for group FileIO Generating dependency graph for group Filtering Generating dependency graph for group SpectraPreprocessers Generating dependency graph for group SpectraFilter Generating dependency graph for group PeakMarker Generating dependency graph for group Analysis Generating dependency graph for group SignalProcessing Generating dependency graph for group PeakPicking Generating dependency graph for group FeatureFinder Generating dependency graph for group MapAlignment Generating dependency graph for group FeatureGrouping Generating dependency graph for group Analysis_ID Generating dependency graph for group SpectraClustering Generating dependency graph for group Visual Generating dependency graph for group SpectrumWidgets Generating dependency graph for group TOPPView_elements Generating dependency graph for group TOPPAS_elements Generating dependency graph for group Dialogs Generating class documentation... Generating docs for compound NucleicAcidSearchEngine... Generating docs for nested compound NucleicAcidSearchEngine::HasInvalidLength... Generating docs for nested compound NucleicAcidSearchEngine::PrecursorInfo... Generating docs for compound TOPPBase... Generating docs for compound TOPPGNPSExport... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace OpenMS Generating graph info page... Generating directory documentation... Generating dependency graph for directory doxygen Generating dependency graph for directory install Generating dependency graph for directory OpenMS_tutorial Generating dependency graph for directory public Generating dependency graph for directory TOPP_tutorial Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 25 parallel threads... 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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The documentation has been successfully created." The documentation has been successfully created. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "You can now open 'doc/index.html' in a web browser." You can now open 'doc/index.html' in a web browser. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off." We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "If you want the full doc, either execute cmake --build . --target doc manually" If you want the full doc, either execute cmake --build . --target doc manually cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "or rerun cmake with -DHAS_XSERVER=On." or rerun cmake with -DHAS_XSERVER=On. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target doc_minimal make -f doc/CMakeFiles/doc_tutorials.dir/build.make doc/CMakeFiles/doc_tutorials.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/CMakeFiles/doc_tutorials.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/CMakeFiles/doc_tutorials.dir/build.make doc/CMakeFiles/doc_tutorials.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Build the OpenMS/TOPP pdf tutorial cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating OpenMS pdf tutorial" Creating OpenMS pdf tutorial cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory OpenMS_tutorial/latex_output cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir OpenMS_tutorial/ /usr/bin/doxygen Doxyfile warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1046 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1182 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1463 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1751 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1767 of file 'Doxyfile' has become obsolete. 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LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on refman.pdf (32 pages, 402757 bytes). Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir OpenMS_tutorial/latex_output/ /usr/bin/makeindex refman.idx This is makeindex, version 2.17 [TeX Live 2023] (kpathsea + Thai support). Scanning input file refman.idx....done (1 entries accepted, 0 rejected). Sorting entries...done (0 comparisons). Generating output file refman.ind....done (5 lines written, 0 warnings). Output written in refman.ind. 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Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E copy OpenMS_tutorial/latex_output/refman.pdf OpenMS_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The OpenMS tutorial in PDF format has been successfully created:" The OpenMS tutorial in PDF format has been successfully created: cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo doc/OpenMS_tutorial.pdf doc/OpenMS_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating TOPP/TOPPView pdf tutorial" Creating TOPP/TOPPView pdf tutorial cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory TOPP_tutorial/latex_output cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir TOPP_tutorial/ /usr/bin/doxygen Doxyfile warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete. 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LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on refman.pdf (52 pages, 1801562 bytes). Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir TOPP_tutorial/latex_output/ /usr/bin/makeindex refman.idx This is makeindex, version 2.17 [TeX Live 2023] (kpathsea + Thai support). Scanning input file refman.idx....done (26 entries accepted, 0 rejected). Sorting entries....done (131 comparisons). Generating output file refman.ind....done (66 lines written, 0 warnings). Output written in refman.ind. 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\vbox (badness 10000) detected at line 31 Underfull \vbox (badness 10000) detected at line 40 Underfull \vbox (badness 10000) detected at line 49 [41 <./TOPP_alignment.png (PNG copy)>]) [42] (./TOPP_example_featuredetection.tex Underfull \hbox (badness 10000) in paragraph at lines 27--27 Underfull \vbox (badness 10000) detected at line 27 Underfull \hbox (badness 10000) in paragraph at lines 54--54 Underfull \vbox (badness 10000) detected at line 54 [43]) [44] (./TOPP_example_featuregrouping.tex Underfull \hbox (badness 10000) detected at line 29 [][][] ) [45 <./TOPP_labeled_quant.png (PNG copy)> <./TOPP_labelfree_quant.png (PNG co py)>] (./TOPP_example_id.tex LaTeX Font Warning: Font shape `OMS/ntxtlf/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbackslash' on input line 4. ) (./TOPP_example_ppp.tex Overfull \hbox (131.68765pt too wide) in paragraph at lines 19--1 \OT1/ntxtlf/b/n/10 IDMap-per \OT1/minntx/m/n/10 tool. The com-bined re-sults ca n then be ex-ported by the \OT1/ntxtlf/b/n/10 Text[]Exporter \OT1/minntx/m/n/10 tool[]: [] [46 <./TOPP_consensus_id.png (PNG copy)>]) [47] (./TOPP_example_convert.tex) [48] (./TOPP_example_qualitycontrol.tex Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 1460) in paragraph at lines 177--177 \OT1/minntx/m/n/10 The Fragment[]Mass[]Error met-ric com-putes a list Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 4108) in paragraph at lines 177--177 []\OT1/minntx/m/n/10 Frequency map of missed cleav-ages as Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 2237) in paragraph at lines 177--177 []\TS1/ntxtlf/m/n/10 '\OT1/minntx/m/n/10 activation[][][]method\TS1/ntxtlf/m/n/ 10 '\OT1/minntx/m/n/10 set to ac-ti-va-tion method Underfull \hbox (badness 2435) in paragraph at lines 177--177 []\TS1/ntxtlf/m/n/10 '\OT1/minntx/m/n/10 base[][][]peak[][][]intensity\TS1/ntxt lf/m/n/10 '\OT1/minntx/m/n/10 set to high-est in-ten-sity Underfull \hbox (badness 10000) in paragraph at lines 177--177 [49 <./TOPP_qualitycontrol.png>] [50] [51] [52]) [53] (./refman.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on refman.pdf (54 pages, 1812066 bytes). Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E copy TOPP_tutorial/latex_output/refman.pdf TOPP_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The OpenMS tutorial in PDF format has been successfully created:" The OpenMS tutorial in PDF format has been successfully created: cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo doc/TOPP_tutorial.pdf doc/TOPP_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target doc_tutorials make -f doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/build.make doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/build.make doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o -MF CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o.d -o CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_AASequence.cpp [ 94%] Linking CXX executable ../../bin/Tutorial_AASequence cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_AASequence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o -o ../../bin/Tutorial_AASequence ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o -MF CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o.d -o CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_Clustering.cpp [ 94%] Linking CXX executable ../../bin/Tutorial_Clustering cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_Clustering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o -o ../../bin/Tutorial_Clustering ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target Tutorial_Clustering make -f doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/build.make doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/build.make doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o -MF CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o.d -o CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:81:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 81 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:31: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:88:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 88 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:95:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 95 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Linking CXX executable ../../bin/Tutorial_ComparatorUtils cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_ComparatorUtils.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target Tutorial_ComparatorUtils make -f doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/build.make doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/build.make doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/Tutorial_DPosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target Tutorial_DPosition make -f doc/code_examples/CMakeFiles/Tutorial_DRange.dir/build.make doc/code_examples/CMakeFiles/Tutorial_DRange.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_DRange.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_DRange.dir/Tutorial_DRange.cpp.o -MF CMakeFiles/Tutorial_DRange.dir/Tutorial_DRange.cpp.o.d -o CMakeFiles/Tutorial_DRange.dir/Tutorial_DRange.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_DRange.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_DRange cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_DRange.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now 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/usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_DRange make -f 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doc/code_examples/CMakeFiles/Tutorial_Enzyme.dir/Tutorial_Enzyme.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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/usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_Enzyme make -f doc/code_examples/CMakeFiles/Tutorial_EmpiricalFormula.dir/build.make doc/code_examples/CMakeFiles/Tutorial_EmpiricalFormula.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd 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doc/code_examples/CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o -MF CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o.d -o CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_EmpiricalFormula.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_EmpiricalFormula cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_EmpiricalFormula.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o -o ../../bin/Tutorial_EmpiricalFormula ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 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make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o -MF CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o.d -o CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FeatureFinder.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FeatureFinder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FeatureFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o -o ../../bin/Tutorial_FeatureFinder ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FeatureFinder make -f doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o -MF CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o.d -o CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FeatureMap.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FeatureMap cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FeatureMap.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o -o ../../bin/Tutorial_FeatureMap ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FeatureMap make -f doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o -MF CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o.d -o CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FileIO.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FileIO cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FileIO.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o -o ../../bin/Tutorial_FileIO ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FileIO make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem 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doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o -MF CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o.d -o CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FileIO_mzML.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FileIO_mzML cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FileIO_mzML.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o -o ../../bin/Tutorial_FileIO_mzML ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FileIO_mzML make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o cd 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doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o -MF CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o.d -o CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FileIO_Consumer.cpp [ 96%] Linking CXX executable ../../bin/Tutorial_FileIO_Consumer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FileIO_Consumer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o -o ../../bin/Tutorial_FileIO_Consumer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o -MF CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o.d -o CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GaussFilter.cpp [ 96%] Linking CXX executable ../../bin/Tutorial_GaussFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GaussFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o -o ../../bin/Tutorial_GaussFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 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doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/Tutorial_MSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o -MF CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o.d -o CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_MSSpectrum.cpp [ 97%] Linking CXX executable ../../bin/Tutorial_MSSpectrum cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_MSSpectrum.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o -o ../../bin/Tutorial_MSSpectrum ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target Tutorial_MSSpectrum make -f doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/Tutorial_MapAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/Tutorial_MetaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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doc/code_examples/CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o -MF CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o.d -o CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_Param.cpp [ 97%] Linking CXX executable ../../bin/Tutorial_Param cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_Param.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o -o ../../bin/Tutorial_Param ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target Tutorial_Param make -f doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/Tutorial_PeakPickerCWT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && 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/usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/Tutorial_Precursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ 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CMakeFiles/Tutorial_RangeManager.dir/Tutorial_RangeManager.cpp.o.d -o CMakeFiles/Tutorial_RangeManager.dir/Tutorial_RangeManager.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_RangeManager.cpp [ 97%] Linking CXX executable ../../bin/Tutorial_RangeManager cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_RangeManager.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_RangeManager.dir/Tutorial_RangeManager.cpp.o -o ../../bin/Tutorial_RangeManager ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 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/build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/build.make doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/Tutorial_ResidueModification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB 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CMakeFiles/Tutorial_ResidueModification.dir/Tutorial_ResidueModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ResidueModification.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_ResidueModification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_ResidueModification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_ResidueModification.dir/Tutorial_ResidueModification.cpp.o -o ../../bin/Tutorial_ResidueModification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_ResidueModification make -f doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem 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doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o -MF CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o.d -o CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_SavitzkyGolayFilter.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_SavitzkyGolayFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o -o ../../bin/Tutorial_SavitzkyGolayFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_SavitzkyGolayFilter make -f doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o -MF CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o.d -o CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_TOFCalibration.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_TOFCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_TOFCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o -o ../../bin/Tutorial_TOFCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_TOFCalibration make -f doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_TheoreticalSpectrumGenerator.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_TheoreticalSpectrumGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o -o ../../bin/Tutorial_TheoreticalSpectrumGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_TheoreticalSpectrumGenerator make -f doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o -MF CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o.d -o CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_MorphologicalFilter.cpp [100%] Linking CXX executable ../../bin/Tutorial_MorphologicalFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_MorphologicalFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o -o ../../bin/Tutorial_MorphologicalFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_MorphologicalFilter make -f doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/Tutorial_Unlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_Unlabeled make -f doc/code_examples/CMakeFiles/Tutorial_typeAsString.dir/build.make doc/code_examples/CMakeFiles/Tutorial_typeAsString.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o -MF CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o.d -o CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_typeAsString.cpp [100%] Linking CXX executable ../../bin/Tutorial_typeAsString cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_typeAsString.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o -o ../../bin/Tutorial_typeAsString ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_typeAsString make -f doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o -MF CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o.d -o CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_PeakIntensityPredictor.cpp [100%] Linking CXX executable ../../bin/Tutorial_PeakIntensityPredictor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_PeakIntensityPredictor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o -o ../../bin/Tutorial_PeakIntensityPredictor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_PeakIntensityPredictor make -f doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o -MF CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o.d -o CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GUI_Spectrum1D.cpp [100%] Linking CXX executable ../../bin/Tutorial_GUI_Spectrum1D cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GUI_Spectrum1D.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o -o ../../bin/Tutorial_GUI_Spectrum1D ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_GUI_Spectrum1D make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o -MF CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o.d -o CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GUI_ParamEditor.cpp [100%] Linking CXX executable ../../bin/Tutorial_GUI_ParamEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GUI_ParamEditor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o -o ../../bin/Tutorial_GUI_ParamEditor ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_GUI_ParamEditor make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o -MF CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o.d -o CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GUI_ListEditor.cpp [100%] Linking CXX executable ../../bin/Tutorial_GUI_ListEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GUI_ListEditor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o -o ../../bin/Tutorial_GUI_ListEditor ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_GUI_ListEditor make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ChargePair.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Compomer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ConstRefVector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ConvexHull2D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVMappingTerm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVMappingRule.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVReference.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVMappings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DBoundingBox.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DIntervalBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DPosition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DRange.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DataValue.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Date.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DateTime.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DefaultParamHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DistanceMatrix.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/FASTAContainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/GridFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/IsotopeCluster.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/KDTree.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ListUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ListUtilsIO.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/LPWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Map.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/MassExplainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/MatchedIterator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Matrix.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Param.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/QTCluster.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/String.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/StringUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/StringListUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ToolDescription.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Utils/MapUtilities.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/AbsoluteQuantitationStandards.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Acquisition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/AcquisitionInfo.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/CVTerm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/CVTermList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/CVTermListInterface.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ChromatogramSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ContactPerson.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DataArrays.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DataProcessing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Digestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DocumentIDTagger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DocumentIdentifier.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ExperimentalDesign.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ExperimentalSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Gradient.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/HPLC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Identification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/IdentificationHit.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Instrument.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/InstrumentSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/IonDetector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/IonSource.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MSQuantifications.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MassAnalyzer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfo.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoDescription.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoInterface.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoInterfaceUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoRegistry.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Modification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/PeptideEvidence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/PeptideHit.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/PeptideIdentification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Precursor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Product.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ProteinHit.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ProteinIdentification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Sample.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SampleTreatment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ScanWindow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Software.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SourceFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumIdentification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumLookup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumMetaDataLookup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Tagging.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/AppliedProcessingStep.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DBSearchParam.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DataProcessingSoftware.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DataProcessingStep.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DataQuery.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentificationData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentificationDataConverter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentifiedCompound.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentifiedSequence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/MetaData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/MoleculeParentMatch.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/MoleculeQueryMatch.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ParentMolecule.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ParentMoleculeGroup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/QueryMatchGroup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ScoreType.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ScoredProcessingResult.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/AreaIterator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/BaseFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ChromatogramPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ChromatogramTools.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ComparatorUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConsensusFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConversionHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConsensusMap.h -- Up-to-date: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConversionHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/DPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/Feature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/FeatureHandle.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/FeatureMap.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MassTrace.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MRMFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MRMTransitionGroup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MSChromatogram.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MSExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MSSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/OnDiscMSExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/Peak1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/Peak2D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/PeakIndex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/RangeManager.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/RangeUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/RichPeak2D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/StandardTypes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/StandardDeclarations.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/SpectrumHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/AAIndex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/AASequence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/CrossLinksDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DecoyGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Element.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ElementDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/EmpiricalFormula.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/EnzymaticDigestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzyme.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzymeDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModificationDefinition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModificationsDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/NASequence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ProteaseDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ProteaseDigestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Residue.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ResidueDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ResidueModification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/RNaseDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/RNaseDigestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Ribonucleotide.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/RibonucleotideDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SimpleTSGXLMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SpectrumAnnotator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Tagger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/WeightWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/Base64.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/Bzip2Ifstream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/Bzip2InputStream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CachedMzML.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ChromeleonFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CompressedInputSource.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CVMappingFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ConsensusXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ControlledVocabulary.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CsvFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DTA2DFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DTAFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/EDTAFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ExperimentalDesignFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FASTAFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FeatureXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FileHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/GzipIfstream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/GzipInputStream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HDF5Connector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/IBSpectraFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/IdXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/IndexedMzMLFileLoader.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/InspectInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/InspectOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/KroenikFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/LibSVMEncoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MRMFeaturePickerFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MRMFeatureQCFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MS2File.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSNumpressCoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSPFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSPGenericFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSstatsFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotGenericFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotRemoteQuery.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MsInspectFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzDataFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzTab.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzTabFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/OMSSACSVFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/OMSSAXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/OSWFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ParamXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PTMXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PeakTypeEstimator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepNovoInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepNovoOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepXMLFileMascot.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PercolatorOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ProtXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/QcMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SequestInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SequestOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SpecArrayFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SVOutStream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SwathFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SqliteConnector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SqMassFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/TextFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ToolDescriptionFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/TransformationXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/UnimodXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XTandemInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XTandemXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FileTypes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzIdentMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzQuantMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/TraMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XMassFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XQuestResultXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ZlibCompression.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/AcqusHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/FidHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzDataHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/TraMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/XMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/VALIDATORS/XMLValidator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h -- Installing: 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-- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/SVM/SimpleSVM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/SVM/SVMWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/PIP/LocalLinearMap.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/MRMMapping.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/HyperScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/PScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OPXLHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/XQuestScores.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/HashGrid.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/ID/IDFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/GaussFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/NLargest.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/Scaler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/DetectabilitySimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/DigestSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/EGHModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/EGHFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/IonizationSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/MSSim.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/RTSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/RawMSSignalSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/SimTypes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/BaseLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/O18Labeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/SILACLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/ICPLLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/Contaminants.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/FragmentMassError.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/FWHM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/MissedCleavages.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/Ms2IdentificationRate.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/Ms2SpectrumStats.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/MzCalibration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/PeptideMass.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/QCBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/RTAlignment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/DBSuitability.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/TIC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/ConsoleUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/INIUpdater.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/MapAlignerBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/OpenSwathBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/ParameterInformation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/ToolHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/TOPPBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/build_config.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/config.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/openms_package_version.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/openms_data_path.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMSConfig.h -- Up-to-date: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/CV -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/CV/psi-ms.obo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/CV/psi-mzdata.obo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/CV/unimod.obo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/CV/unit.obo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/CV/brenda.obo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/CV/qc-cv.obo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/CV/quality.obo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/CV/goslim_goa.obo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/MAPPING -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/MAPPING/ms-mapping.xml -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/MAPPING/mzdata-mapping.xml -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/MAPPING/mzIdentML-mapping.xml -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/MAPPING/TraML-mapping.xml -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/GUISTYLE -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/GUISTYLE/qtStyleSheet.qss -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/XTandemToPercolator.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Rscript_qcfigures_acc.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Rscript_mzTab2tsv_PRT.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Percolator.ttd -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/MSGFtoPercolator.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/RawDirConvert.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Rscript_qcfigures_trapfill.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Rscript_mzTab2tsv_PEP.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/QCExporter.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/TPP_RefreshParser.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Rscript_mzTab2tsv_PSM.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Rscript_qcfigures_idmap.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Hardkloer.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/TEMPLATE.ttd_ -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Rscript_generic.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/MascotPercolator.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/Rscript_qcfigures_rt_acc.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/TOOLS/EXTERNAL/msconvert.ttd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/DESKTOP -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/DESKTOP/TOPPView.appdata.xml -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/DESKTOP/TOPPAS.appdata.xml -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/DESKTOP/TOPPView.desktop -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/DESKTOP/readme.txt -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/DESKTOP/TOPPAS.desktop -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/THIRDPARTY -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/THIRDPARTY/ReadMe.txt -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/mzXML_3.1.xsd -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/mzML_1_10.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/ConsensusXML_1_7.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/ConsensusXML_1_4.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/pepXML_v122.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/ConsensusXML_1_0.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/mzQuantML_1_0_0-rc2.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_7.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/ToolDescriptor_1_0.xsd -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCRIPTS/ProduceQCFigures_rt_acc.R -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCRIPTS/mzTab2tsv_PEP.R -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/IDPool -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/IDPool/IDPool.txt -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/IDPool/README -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/PIP -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/PIP/linearMapping.data -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/PIP/codebooks.data -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/examples -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/examples/TOPPAS -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/examples/TOPPAS/merger_tutorial.toppas -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/examples/TOPPAS/GenericWrapper_Rscript-generic.toppas -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/examples/TOPPAS/peakpicker_tutorial.toppas -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/examples/TOPPAS/data -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/examples/TOPPAS/data/BSA_Identification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/examples/TOPPAS/data/BSA_Identification/18Protein_SoCe_Tr_detergents_trace_target_decoy.fasta.pin -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnUtil.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnConfig.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/lib/libOpenMS_GUI.so.2.6.0 -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MISC/ExternalProcessMBox.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MISC/GUIHelpers.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/AxisTickCalculator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/AxisPainter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/AxisWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ColorSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/EnhancedTabBar.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/EnhancedWorkspace.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/FilterList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/GUIProgressLoggerImpl.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/HistogramWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/InputFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/InputFileList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/LayerData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ListEditor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MetaDataBrowser.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MultiGradient.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MultiGradientSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/OutputDirectory.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ParamEditor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectraViewWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectraIdentificationViewWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum1DCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum1DWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum2DCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum2DWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum3DCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum3DWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectrumCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectrumWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SwathLibraryStats.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASEdge.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASInputFileListVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASLogWindow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASMergerVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASOutputFileListVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASResource.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASResources.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASScene.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASSplitterVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASTabBar.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASToolVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASTreeView.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/HistogramDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/PythonSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/ToolsDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/VISUAL/OpenMS_GUIConfig.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/INIFileEditor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SwathWizard -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TOPPAS -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TOPPView -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/BaselineFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CometAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CompNovo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CompNovoCID -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ConsensusID -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ConsensusMapNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CruxAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DatabaseSuitability -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Decharger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DTAExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/EICExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ExternalCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FalseDiscoveryRate -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderCentroided -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderIdentification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderIsotopeWavelet -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMetabo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMRM -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMultiplex -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerLabeled -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerUnlabeled -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerUnlabeledKD -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerUnlabeledQT -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FidoAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileInfo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/GenericWrapper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/GNPSExport -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/HighResPrecursorMassCorrector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDConflictResolver -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDFileConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDMapper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDPosteriorErrorProbability -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDRipper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDRTCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/InclusionExclusionListCreator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/InspectAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/InternalCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IsobaricAnalyzer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/LuciphorAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerIdentification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerPoseClustering -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerSpectrum -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerTreeGuided -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapRTTransformer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapStatistics -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MaRaClusterAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MascotAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MascotAdapterOnline -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MassTraceExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MRMMapper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSGFPlusAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MyriMatchAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MzTabExporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NoiseFilterGaussian -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NoiseFilterSGolay -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OMSSAAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenPepXL -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenPepXLLF -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathAnalyzer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathAssayGenerator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathChromatogramExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathConfidenceScoring -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathDecoyGenerator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathFeatureXMLToTSV -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathRTNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeakPickerHiRes -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeakPickerWavelet -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PepNovoAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeptideIndexer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PercolatorAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PhosphoScoring -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PrecursorIonSelector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PrecursorMassCorrector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteinInference -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteinQuantifier -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteinResolver -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PTModel -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PTPredict -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QualityControl -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RTModel -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RTPredict -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SeedListGenerator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpecLibSearcher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterBernNorm -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterMarkerMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterNLargest -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterParentPeakMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterScaler -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterSqrtMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterThresholdMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterWindowMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TextExporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TOFCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/XFDR -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/XTandemAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ExecutePipeline -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Resampler -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/AccurateMassSearch -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/AssayGeneratorMetabo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ClusterMassTraces -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ClusterMassTracesByPrecursor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CVInspector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DatabaseFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DecoyDatabase -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DeMeanderize -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Digestor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DigestorMotif -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Epifany -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ERPairFinder -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMetaboIdent -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderSuperHirn -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FFEval -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FuzzyDiff -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDDecoyProbability -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDMassAccuracy -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDScoreSwitcher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDSplitter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/LabeledEval -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MassCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MetaboliteAdductDecharger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MetaboliteSpectralMatcher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MetaProSIP -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MRMPairFinder -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSFraggerAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSSimulator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSstatsConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MultiplexResolver -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MzMLSplitter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NovorAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NucleicAcidSearchEngine -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenMSInfo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeakPickerIterative -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PSMFeatureExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCEmbedder -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCExporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCImporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCShrinker -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteomicsLFQ -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNADigestor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNAMassCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNPxlXICFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNPxlSearch -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RTEvaluation -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SemanticValidator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SequenceCoverageCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SimpleSearchEngine -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SiriusAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpecLibCreator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraSTSearchAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/StaticModification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TICCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TransformationEvaluation -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/XMLValidator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TargetedFileConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathDIAPreScoring -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathMzMLFileCacher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathWorkflow -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathFileSplitter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathRewriteToFeatureXML -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MRMTransitionGroupPicker -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ImageCreator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/INIUpdater -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIUpdater_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassTraceExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderIdentification.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions_func.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/known_dev_bugs.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_general.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_TransformationEvaluation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_INIFileEditor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doxygen.css -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine__inherit__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterBernNorm.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCShrinker.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InternalCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileInfo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DigestorMotif_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderCentroided_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Dialogs.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_qualitycontrol.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/graph_legend.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAssayGenerator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlSearch_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MyriMatchAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespaceOpenMS.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_5_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NovorAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMMapper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathConfidenceScoring.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PrecursorIonSelector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTraces_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNLargest_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SeedListGenerator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRewriteToFeatureXML_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPBase__inherit__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterParentPeakMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDSplitter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS_overview.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_Decharger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibSearcher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/pages.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteAdductDecharger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExecutePipeline_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/globals.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Math.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibCreator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditorWindow_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ExternalCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterMarkerMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_a.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibSearcher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCEmbedder_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PepNovoAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapterOnline_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakMarker_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderMRM.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNAMassCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_baseline.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerTreeGuided_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterWindowMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileMerger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterSGolay_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIdentification_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDDecoyProbability_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PhosphoScoring_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_BaselineFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureGrouping.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaProSIP_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__tutorial_2TOPPAS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterBernNorm_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LuciphorAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_InspectAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAssayGenerator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TICCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ERPairFinder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TargetedFileConverter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIdentification_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FuzzyDiff_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCExporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTModel_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/EICExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerUnlabeledQT.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_fd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SimpleSearchEngine_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapRTTransformer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorMassCorrector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapStatistics.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GenericWrapper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerTreeGuided.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterNLargest.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIsotopeWavelet_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_4.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MaRaClusterAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MyriMatchAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CruxAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzMLSplitter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDecoyGenerator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRTNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovoCID_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMerger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOFCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMSInfo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doc.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterSGolay_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderSuperHirn_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_5.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_NucleicAcidSearchEngine.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTracesByPrecursor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_7_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XTandemAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibSearcher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_example_merger.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classes.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Metadata.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerPoseClustering_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XMLValidator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_3.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraClustering.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NovorAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/todo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathAnalyzer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/open.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_run_options.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXLLF_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlSearch_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FFEval.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Decharger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AssayGeneratorMetabo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Dialogs.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPAS__elements.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/HighResPrecursorMassCorrector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterBernNorm_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRipper_8cpp.html -- Installing: 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Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/minus.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterWindowMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXLLF_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DecoyDatabase_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SpecLibCreator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/topics.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SvmTheoreticalSpectrumGeneratorTrainer_8cpp__incl.svg -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRTCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SequenceCoverageCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerWavelet_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FileIO_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_04f2ecc425faf0d475a3caf484e551f3_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dot_inline_dotgraph_1.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassTraceExtractor_8cpp__incl_org.svg -- Installing: 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Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterThresholdMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXL_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_mac_bin.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsMisc.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PTPredict.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CompNovoCID.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathDecoyGenerator.html -- Installing: 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Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Epifany_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InclusionExclusionListCreator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Kernel_DataPoints.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassTraceExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerSpectrum_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TargetedFileConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerUnlabeled.html -- Installing: 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Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCEmbedder_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MSGFPlusAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseSuitability_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_InternalCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DecoyDatabase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Filtering_org.svg -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakPicking.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_XTandemAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_BSA_Quantitation.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerIdentification_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_baseline_reduction.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteomicsLFQ_8cpp.html -- Installing: 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Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doxygen_2public_2TOPPAS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzMLSplitter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovoCID_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCMerger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InspectAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-win-bin_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderMultiplex.html -- Installing: 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-- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FileIO.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusID_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions_vars.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureGrouping_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DeMeanderize_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNAMassCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterParentPeakMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FFEval_8cpp.html 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__dep__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapStatistics_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FFEval_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_RTModel.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPView__elements_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinInference_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TextExporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IsobaricAnalyzer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers_enum.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Resampler_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDecoyGenerator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MascotAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterScaler_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDScoreSwitcher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerIterative_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QualityControl_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/HighResPrecursorMassCorrector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRewriteToFeatureXML_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureFinder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PeptideIndexer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Filtering.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_featuregrouping.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinResolver_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_raw_data.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1AnnotatedHit__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DigestorMotif.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TICCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_consensus_id.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileConverter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetabo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseSuitability_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SpectraSTSearchAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MyriMatchAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathWorkflow_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XTandemAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRipper_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterMarkerMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetaboIdent_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathAssayGenerator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapterOnline_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c9f25c269f6c79194ec5671a83695c64.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis__ID.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Epifany_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1AnnotatedHit__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/deprecated.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/style_ini.css -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PercolatorAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDSplitter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlXICFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_documentation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CometAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS__Tutorial__html_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/splitbar.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectrumWidgets.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_NoiseFilterGaussian.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__concepts_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_interface.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/annotated.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderopen.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapRTTransformer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Spectrum2DWidget.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathFileSplitter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SimpleSearchEngine_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_4_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMPairFinder_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFileSplitter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetabo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SignalProcessing_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/experimental.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathChromatogramExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderCentroided_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathConfidenceScoring_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MSSimulator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FalseDiscoveryRate_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCode_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/sync_on.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsMisc_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzMLSplitter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DigestorMotif_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCShrinker_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDRTCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_id.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MzTabExporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_ebd3f5f0482b02ff4c3b89293f04ed6c_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDDecoyProbability.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSFraggerAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MzMLSplitter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SemanticValidator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FeatureFinderMetaboIdent.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterGaussian_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSGFPlusAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dynsections.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CompNovo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView__interface_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCEmbedder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DTAExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LuciphorAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMPairFinder_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_BSA_results_2d.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathWorkflow_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/index.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDConflictResolver_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XFDR_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNormalizer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPView__elements.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_EICExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_HighResPrecursorMassCorrector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/files.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/pyOpenMS.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_9_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MetaProSIP.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeptideIndexer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMMapper_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNAMassCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterThresholdMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathChromatogramExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SignalProcessing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_ff_centroided.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinResolver_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerLabeled_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FAQ.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_TextExporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMultiplex_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_Epifany.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_2_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraPreprocessers_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathRTNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderIsotopeWavelet.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusMapNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/menudata.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PepNovoAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IsobaricAnalyzer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PercolatorAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_signalprocessing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPViewBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CruxAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CruxAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_smoothing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_3_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/graph_legend.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerWavelet_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SvmTheoreticalSpectrumGeneratorTrainer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_edges.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_1358a02fb1ca1b471aa8f78386a5e6ad_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlSearch_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerIterative_8cpp.html -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSSimulator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMRM_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlXICFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMSInfo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Filtering.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAnalyzer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_featuredetection.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFileConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_6.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LabeledEval_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_GenericWrapper.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CometAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QApplicationTOPP_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LabeledEval_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteomicsLFQ_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerPoseClustering_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_analysis.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsMisc.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TransformationEvaluation_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LabeledEval_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ProteinInference.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakPicking.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MassCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_ppp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GenericWrapper_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GNPSExport_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_TOPPAS.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTPredict_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzTabExporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovoCID_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SeedListGenerator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathMzMLFileCacher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTModel_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerSpectrum_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InternalCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ConsensusID.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDFileConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerIdentification.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IsobaricAnalyzer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMassAccuracy_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFeatureXMLToTSV_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_modes.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_alignment.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDDecoyProbability_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorIonSelector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerHiRes_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusID_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileInfo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FalseDiscoveryRate_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_statistics.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ExecutePipeline.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FeatureFinderSuperHirn.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DecoyDatabase_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Format.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapRTTransformer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXL_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_views.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespaces.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ERPairFinder_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledQT_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDMassAccuracy.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XMLValidator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_Digestor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_documentation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GenericWrapper_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/EICExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusMapNormalizer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMTransitionGroupPicker_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteAdductDecharger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_PeakPickerIterative.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathMzMLFileCacher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFeatureXMLToTSV_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_win_bin.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerHiRes_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/EICExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_PSMFeatureExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_parameters.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCShrinker_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AssayGeneratorMetabo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_TOFCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NucleicAcidSearchEngine_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpecLibSearcher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XTandemAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MSstatsConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ClusterMassTraces.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRewriteToFeatureXML_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DatabaseFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_e68e8157741866f444e17edd764ebbae.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeptideIndexer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTEvaluation_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FidoAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDRipper.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/svg.min.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ImageCreator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTPredict_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDScoreSwitcher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMassAccuracy_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledQT_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MapAlignment.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureFinder.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseSuitability_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_NoiseFilterSGolay.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_9.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Datastructures.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GNPSExport_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TICCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SemanticValidator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileInfo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/docd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Resampler_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MultiplexResolver_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDIAPreScoring_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PepNovoAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TextExporter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_editing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterSGolay_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherits.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SequenceCoverageCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMRM_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditorWindow_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMapper_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIdentification_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathRewriteToFeatureXML.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditorWindow_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions_type.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SemanticValidator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS__Tutorial_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterScaler_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PSMFeatureExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/globals_defs.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsStatistics.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PrecursorMassCorrector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SwathWizard.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExecutePipeline_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_simple_example.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPBase.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Quickstart.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GNPSExport_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RTEvaluation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_b.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SiriusAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SequenceCoverageCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FalseDiscoveryRate_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinInference_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Math.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Kernel.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Chemistry.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinResolver_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerIdentification_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTModel_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakMarker.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__Tutorial__html_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPAS__elements.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRTCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_04f2ecc425faf0d475a3caf484e551f3.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNAMassCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FidoAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIUpdater_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-win_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers_func.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PSMFeatureExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaProSIP_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizardBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzTabExporter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FileIO.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Dialogs_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTracesByPrecursor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeled_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_feature_detection_centroided.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathConfidenceScoring_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/formula.repository -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerTreeGuided_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_04f2ecc425faf0d475a3caf484e551f3_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_bd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMPairFinder_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinInference_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ERPairFinder_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_Resampler.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFileSplitter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/improvement.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PhosphoScoring_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterSqrtMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/KnownDevBugs_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_GNPSExport.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDPosteriorErrorProbability_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MetaboliteSpectralMatcher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CVInspector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledKD_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_concepts.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OMSSAAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/classes_3.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/searchdata.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/classes_0.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_b.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/variables_4.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/close.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_12.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_0.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_18.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_13.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/typedefs_3.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/search.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_4.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/variables_9.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_3.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/typedefs_0.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_8.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_6.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_6.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_b.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_7.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_10.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_f.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/functions_8.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_0.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/functions_9.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/variables_1.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/functions_b.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/functions_7.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_14.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_4.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_16.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_4.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_1.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_7.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_b.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/functions_1.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/variables_7.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/functions_5.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_1a.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_c.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_1.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_6.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_e.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/variables_2.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_14.js -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/mag.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/variables_8.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_c.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_b.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/variables_a.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/mag_d.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/defines_1.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/functions_4.js -- Installing: 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Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetaboIdent_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/bc_sd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathDIAPreScoring.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MapAlignment.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraMerger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_introduction.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderCentroided_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraSTSearchAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_help.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_baseline_filtered.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenPepXL.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_LabeledEval.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTModel_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_StaticModification.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXL_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterParentPeakMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_NovorAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerLabeled_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterWindowMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CVInspector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_sd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers_eval.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAnalyzer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMultiplex_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MapAlignment_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSSimulator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ClusterMassTracesByPrecursor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/HighResPrecursorMassCorrector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CometAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Visual.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileInfo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QualityControl_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MaRaClusterAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteSpectralMatcher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MultiplexResolver.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QuickStart_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderCentroided.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTPredict_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteSpectralMatcher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/BaselineFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMSInfo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/BaselineFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SiriusAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_8.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_f.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteomicsLFQ_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FuzzyDiff_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_convert.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ImageCreator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerSpectrum_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSGFPlusAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PepNovoAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDPosteriorErrorProbability_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzTabExporter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/common-cmake-parameters_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibCreator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Main_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeptideIndexer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNADigestor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_TargetedFileConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Epifany_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerWavelet_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/jquery.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathWorkflow_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinQuantifier_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SiriusAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_RTPredict.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_0.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraFilter_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_caacfbd3799919944b233424e5b36887.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InclusionExclusionListCreator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PeakPickerWavelet.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathMzMLFileCacher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AssayGeneratorMetabo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterGaussian_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_DatabaseSuitability.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__dep__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Digestor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDIAPreScoring_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraClustering.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaDataBrowser.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_Ecoli_Identification.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlXICFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__scripting_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OMSSAAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_1.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetaboIdent_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_0.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNLargest_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSstatsConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/closed.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_1358a02fb1ca1b471aa8f78386a5e6ad.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_ebd3f5f0482b02ff4c3b89293f04ed6c_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerSpectrum.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerPoseClustering.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Format.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_peakpicking.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerLabeled.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SemanticValidator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSFraggerAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InternalCalibration_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTEvaluation_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_XMLValidator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderclosedd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NovorAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doxygen.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FalseDiscoveryRate.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PSMFeatureExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledKD_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_QualityControl.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteAdductDecharger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_TICCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SeedListGenerator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MRMPairFinder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/plusd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XFDR_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectrumWidgets_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureFinder_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_DTAExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinQuantifier_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DeMeanderize.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathConfidenceScoring_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Simulation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIUpdater_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMapper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SvmTheoreticalSpectrumGeneratorTrainer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNADigestor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_h.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_noisefilter_filtered.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusID_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNPxlXICFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapNormalizer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTraces_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_icons.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_linux_bin.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapterOnline_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MascotAdapterOnline.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_qualitycontrol.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXLLF_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MultiplexResolver_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNADigestor_8cpp.html -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QApplicationTOPP_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/StaticModification_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_general.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExporter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAssayGenerator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_parts.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTEvaluation_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderMetabo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Digestor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FuzzyDiff.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizardBase_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMassAccuracy_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AccurateMassSearch_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CruxAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCImporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SeedListGenerator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledKD_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/globals_func.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PercolatorAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTPredict_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetabo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDMapper.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNADigestor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterSqrtMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_1358a02fb1ca1b471aa8f78386a5e6ad_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_AssayGeneratorMetabo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDConflictResolver_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathWorkflow.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MaRaClusterAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IsobaricAnalyzer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerBase.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExporter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPBase__inherit__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_XFDR.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDScoreSwitcher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterMarkerMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DTAExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NucleicAcidSearchEngine_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderopend.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledQT_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CVInspector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterGaussian_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorMassCorrector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMTransitionGroupPicker_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterParentPeakMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_noisefilter.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c9f25c269f6c79194ec5671a83695c64_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterSqrtMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp_source.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNLargest_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Terms_Spectrum.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCImporter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDecoyGenerator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-macs_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FAQ_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSSimulator_8cpp__incl.svg -- 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SvmTheoreticalSpectrumGeneratorTrainer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRTNormalizer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DTAExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/bug.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMMapper_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_pp_picked.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRipper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDDecoyProbability_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_linux.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTracesByPrecursor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OMSSAAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderclosed.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_menu.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Modules_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SequenceCoverageCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XMLValidator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Decharger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFileSplitter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MetaboliteAdductDecharger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PTModel.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ImageCreator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerIterative_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExecutePipeline_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DeMeanderize_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenPepXLLF.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_advanced.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterWindowMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerPoseClustering_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_BSA_results_3d.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCImporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/index.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/TOPP_tutorial.pdf -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/OpenMS_tutorial.pdf make[2]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' dh_install -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0//usr/lib/i386-linux-gnu cp --reflink=auto -a ./debian/tmp/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 ./debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ./debian/tmp/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ./debian/tmp/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 debian/libopenms2.6.0//usr/lib/i386-linux-gnu/ install -m0755 -d debian/libopenms-dev//usr/share/openms cp --reflink=auto -a debian/tmp/usr/share/openms/cmake debian/libopenms-dev//usr/share/openms/ install -m0755 -d debian/libopenms-dev/usr/include cp --reflink=auto -a debian/tmp/usr/include/OpenMS/OpenMS debian/libopenms-dev/usr/include/ install -m0755 -d debian/topp//usr/bin cp --reflink=auto -a debian/tmp/usr/bin/AccurateMassSearch debian/tmp/usr/bin/AssayGeneratorMetabo debian/tmp/usr/bin/BaselineFilter debian/tmp/usr/bin/CVInspector debian/tmp/usr/bin/ClusterMassTraces debian/tmp/usr/bin/ClusterMassTracesByPrecursor debian/tmp/usr/bin/CometAdapter debian/tmp/usr/bin/CompNovo debian/tmp/usr/bin/CompNovoCID debian/tmp/usr/bin/ConsensusID debian/tmp/usr/bin/ConsensusMapNormalizer debian/tmp/usr/bin/CruxAdapter debian/tmp/usr/bin/DTAExtractor debian/tmp/usr/bin/DatabaseFilter debian/tmp/usr/bin/DatabaseSuitability debian/tmp/usr/bin/DeMeanderize debian/tmp/usr/bin/Decharger debian/tmp/usr/bin/DecoyDatabase debian/tmp/usr/bin/Digestor debian/tmp/usr/bin/DigestorMotif debian/tmp/usr/bin/EICExtractor debian/tmp/usr/bin/ERPairFinder debian/tmp/usr/bin/Epifany debian/tmp/usr/bin/ExecutePipeline debian/tmp/usr/bin/ExternalCalibration debian/tmp/usr/bin/FFEval debian/tmp/usr/bin/FalseDiscoveryRate debian/tmp/usr/bin/FeatureFinderCentroided debian/tmp/usr/bin/FeatureFinderIdentification debian/tmp/usr/bin/FeatureFinderIsotopeWavelet debian/tmp/usr/bin/FeatureFinderMRM debian/tmp/usr/bin/FeatureFinderMetabo debian/tmp/usr/bin/FeatureFinderMetaboIdent debian/tmp/usr/bin/FeatureFinderMultiplex debian/tmp/usr/bin/FeatureFinderSuperHirn debian/tmp/usr/bin/FeatureLinkerLabeled debian/tmp/usr/bin/FeatureLinkerUnlabeled debian/tmp/usr/bin/FeatureLinkerUnlabeledKD debian/tmp/usr/bin/FeatureLinkerUnlabeledQT debian/tmp/usr/bin/FidoAdapter debian/tmp/usr/bin/FileConverter debian/tmp/usr/bin/FileFilter debian/tmp/usr/bin/FileInfo debian/tmp/usr/bin/FileMerger debian/tmp/usr/bin/FuzzyDiff debian/tmp/usr/bin/GNPSExport debian/tmp/usr/bin/GenericWrapper debian/tmp/usr/bin/HighResPrecursorMassCorrector debian/tmp/usr/bin/IDConflictResolver debian/tmp/usr/bin/IDDecoyProbability debian/tmp/usr/bin/IDExtractor debian/tmp/usr/bin/IDFileConverter debian/tmp/usr/bin/IDFilter debian/tmp/usr/bin/IDMapper debian/tmp/usr/bin/IDMassAccuracy debian/tmp/usr/bin/IDMerger debian/tmp/usr/bin/IDPosteriorErrorProbability debian/tmp/usr/bin/IDRTCalibration debian/tmp/usr/bin/IDRipper debian/tmp/usr/bin/IDScoreSwitcher debian/tmp/usr/bin/IDSplitter debian/tmp/usr/bin/INIFileEditor debian/tmp/usr/bin/INIUpdater debian/tmp/usr/bin/ImageCreator debian/tmp/usr/bin/InclusionExclusionListCreator debian/tmp/usr/bin/InspectAdapter debian/tmp/usr/bin/InternalCalibration debian/tmp/usr/bin/IsobaricAnalyzer debian/tmp/usr/bin/LabeledEval debian/tmp/usr/bin/LuciphorAdapter debian/tmp/usr/bin/MRMMapper debian/tmp/usr/bin/MRMPairFinder debian/tmp/usr/bin/MRMTransitionGroupPicker debian/tmp/usr/bin/MSFraggerAdapter debian/tmp/usr/bin/MSGFPlusAdapter debian/tmp/usr/bin/MSSimulator debian/tmp/usr/bin/MSstatsConverter debian/tmp/usr/bin/MaRaClusterAdapter debian/tmp/usr/bin/MapAlignerIdentification debian/tmp/usr/bin/MapAlignerPoseClustering debian/tmp/usr/bin/MapAlignerSpectrum debian/tmp/usr/bin/MapAlignerTreeGuided debian/tmp/usr/bin/MapNormalizer debian/tmp/usr/bin/MapRTTransformer debian/tmp/usr/bin/MapStatistics debian/tmp/usr/bin/MascotAdapter debian/tmp/usr/bin/MascotAdapterOnline debian/tmp/usr/bin/MassCalculator debian/tmp/usr/bin/MassTraceExtractor debian/tmp/usr/bin/MetaProSIP debian/tmp/usr/bin/MetaboliteAdductDecharger debian/tmp/usr/bin/MetaboliteSpectralMatcher debian/tmp/usr/bin/MultiplexResolver debian/tmp/usr/bin/MyriMatchAdapter debian/tmp/usr/bin/MzMLSplitter debian/tmp/usr/bin/MzTabExporter debian/tmp/usr/bin/NoiseFilterGaussian debian/tmp/usr/bin/NoiseFilterSGolay debian/tmp/usr/bin/NovorAdapter debian/tmp/usr/bin/NucleicAcidSearchEngine debian/tmp/usr/bin/OMSSAAdapter debian/tmp/usr/bin/OpenMSInfo debian/tmp/usr/bin/OpenPepXL debian/tmp/usr/bin/OpenPepXLLF debian/tmp/usr/bin/OpenSwathAnalyzer debian/tmp/usr/bin/OpenSwathAssayGenerator debian/tmp/usr/bin/OpenSwathChromatogramExtractor debian/tmp/usr/bin/OpenSwathConfidenceScoring debian/tmp/usr/bin/OpenSwathDIAPreScoring debian/tmp/usr/bin/OpenSwathDecoyGenerator debian/tmp/usr/bin/OpenSwathFeatureXMLToTSV debian/tmp/usr/bin/OpenSwathFileSplitter debian/tmp/usr/bin/OpenSwathMzMLFileCacher debian/tmp/usr/bin/OpenSwathRTNormalizer debian/tmp/usr/bin/OpenSwathRewriteToFeatureXML debian/tmp/usr/bin/OpenSwathWorkflow debian/tmp/usr/bin/PSMFeatureExtractor debian/tmp/usr/bin/PTModel debian/tmp/usr/bin/PTPredict debian/tmp/usr/bin/PeakPickerHiRes debian/tmp/usr/bin/PeakPickerIterative debian/tmp/usr/bin/PeakPickerWavelet debian/tmp/usr/bin/PepNovoAdapter debian/tmp/usr/bin/PeptideIndexer debian/tmp/usr/bin/PercolatorAdapter debian/tmp/usr/bin/PhosphoScoring debian/tmp/usr/bin/PrecursorIonSelector debian/tmp/usr/bin/PrecursorMassCorrector debian/tmp/usr/bin/ProteinInference debian/tmp/usr/bin/ProteinQuantifier debian/tmp/usr/bin/ProteinResolver debian/tmp/usr/bin/ProteomicsLFQ debian/tmp/usr/bin/QCCalculator debian/tmp/usr/bin/QCEmbedder debian/tmp/usr/bin/QCExporter debian/tmp/usr/bin/QCExtractor debian/tmp/usr/bin/QCImporter debian/tmp/usr/bin/QCMerger debian/tmp/usr/bin/QCShrinker debian/tmp/usr/bin/QualityControl debian/tmp/usr/bin/RNADigestor debian/tmp/usr/bin/RNAMassCalculator debian/tmp/usr/bin/RNPxlSearch debian/tmp/usr/bin/RNPxlXICFilter debian/tmp/usr/bin/RTEvaluation debian/tmp/usr/bin/RTModel debian/tmp/usr/bin/RTPredict debian/tmp/usr/bin/Resampler debian/tmp/usr/bin/SeedListGenerator debian/tmp/usr/bin/SemanticValidator debian/tmp/usr/bin/SequenceCoverageCalculator debian/tmp/usr/bin/SimpleSearchEngine debian/tmp/usr/bin/SiriusAdapter debian/tmp/usr/bin/SpecLibCreator debian/tmp/usr/bin/SpecLibSearcher debian/tmp/usr/bin/SpectraFilterBernNorm debian/tmp/usr/bin/SpectraFilterMarkerMower debian/tmp/usr/bin/SpectraFilterNLargest debian/tmp/usr/bin/SpectraFilterNormalizer debian/tmp/usr/bin/SpectraFilterParentPeakMower debian/tmp/usr/bin/SpectraFilterScaler debian/tmp/usr/bin/SpectraFilterSqrtMower debian/tmp/usr/bin/SpectraFilterThresholdMower debian/tmp/usr/bin/SpectraFilterWindowMower debian/tmp/usr/bin/SpectraMerger debian/tmp/usr/bin/SpectraSTSearchAdapter debian/tmp/usr/bin/StaticModification debian/tmp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/tmp/usr/bin/SwathWizard debian/tmp/usr/bin/TICCalculator debian/tmp/usr/bin/TOFCalibration debian/tmp/usr/bin/TOPPAS debian/tmp/usr/bin/TOPPView debian/tmp/usr/bin/TargetedFileConverter debian/tmp/usr/bin/TextExporter debian/tmp/usr/bin/TransformationEvaluation debian/tmp/usr/bin/XFDR debian/tmp/usr/bin/XMLValidator debian/tmp/usr/bin/XTandemAdapter debian/topp//usr/bin/ install -m0755 -d debian/topp/usr/share/applications cp --reflink=auto -a debian/tmp/usr/share/openms/DESKTOP/TOPPAS.desktop debian/tmp/usr/share/openms/DESKTOP/TOPPView.desktop debian/topp/usr/share/applications/ install -m0755 -d debian/topp/usr/share/metainfo cp --reflink=auto -a debian/tmp/usr/share/openms/DESKTOP/TOPPAS.appdata.xml debian/tmp/usr/share/openms/DESKTOP/TOPPView.appdata.xml debian/topp/usr/share/metainfo/ install -m0755 -d debian/topp/usr/share/pixmaps cp --reflink=auto -a ./debian/TOPPAS.xpm ./debian/TOPPView.xpm debian/topp/usr/share/pixmaps/ install -m0755 -d debian/openms-common//usr/share/openms cp --reflink=auto -a debian/tmp/usr/share/openms/CHEMISTRY debian/tmp/usr/share/openms/CV debian/tmp/usr/share/openms/DESKTOP debian/tmp/usr/share/openms/GUISTYLE debian/tmp/usr/share/openms/IDPool debian/tmp/usr/share/openms/MAPPING debian/tmp/usr/share/openms/PIP debian/tmp/usr/share/openms/SCHEMAS debian/tmp/usr/share/openms/SCRIPTS debian/tmp/usr/share/openms/TOOLS debian/tmp/usr/share/openms/XSL debian/openms-common//usr/share/openms/ install -m0755 -d debian/openms-doc/usr/share/doc/openms cp --reflink=auto -a ./debian/tmp/usr/share/doc/openms/html ./debian/tmp/usr/share/openms/examples debian/openms-doc/usr/share/doc/openms/ install -m0755 -d debian/openms-doc/usr/share/doc/openms/html cp --reflink=auto -a ./debian/tmp/usr/share/doc/openms/index.html debian/openms-doc/usr/share/doc/openms/html/ install -m0755 -d debian/openms-doc/usr/share/doc/openms/tutorials cp --reflink=auto -a ./debian/tmp/usr/share/doc/openms/OpenMS_tutorial.pdf ./debian/tmp/usr/share/doc/openms/TOPP_tutorial.pdf debian/openms-doc/usr/share/doc/openms/tutorials/ dh_installdocs -O--buildsystem=cmake -O--no-parallel dh_installdocs: warning: Could not parse openms-doc.doc-base.topp-tutorial for doc-base Document id; skipping install -m0755 -d debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0 install -p -m0644 debian/copyright debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0/copyright install -m0755 -d debian/libopenms-dev/usr/share/doc/libopenms-dev install -p -m0644 debian/copyright debian/libopenms-dev/usr/share/doc/libopenms-dev/copyright install -m0755 -d debian/topp/usr/share/doc/topp install -p -m0644 debian/copyright debian/topp/usr/share/doc/topp/copyright install -m0755 -d debian/openms-common/usr/share/doc/openms-common install -p -m0644 debian/copyright debian/openms-common/usr/share/doc/openms-common/copyright install -m0755 -d debian/openms-doc/usr/share/doc/openms-doc install -p -m0644 debian/copyright debian/openms-doc/usr/share/doc/openms-doc/copyright install -m0755 -d debian/openms-doc/usr/share/doc-base/ install -p -m0644 debian/openms-doc.doc-base.libopenms-tutorial debian/openms-doc/usr/share/doc-base/openms-doc.libopenms-documentation install -m0755 -d debian/openms/usr/share/doc/openms install -m0755 -d debian/openms/usr/share/doc/openms cp --reflink=auto -a ./AUTHORS debian/openms/usr/share/doc/openms chown -R 0:0 debian/openms/usr/share/doc chmod -R u\+rw,go=rX debian/openms/usr/share/doc install -p -m0644 debian/copyright debian/openms/usr/share/doc/openms/copyright dh_installchangelogs -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0 install -p -m0644 debian/.debhelper/generated/libopenms2.6.0/dh_installchangelogs.dch.trimmed debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0/changelog.Debian install -p -m0644 ./CHANGELOG debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0/changelog install -m0755 -d debian/openms-common/usr/share/doc/openms-common install -p -m0644 debian/.debhelper/generated/openms-common/dh_installchangelogs.dch.trimmed debian/openms-common/usr/share/doc/openms-common/changelog.Debian install -p -m0644 ./CHANGELOG debian/openms-common/usr/share/doc/openms-common/changelog install -m0755 -d debian/libopenms-dev/usr/share/doc/libopenms-dev install -p -m0644 debian/.debhelper/generated/libopenms-dev/dh_installchangelogs.dch.trimmed debian/libopenms-dev/usr/share/doc/libopenms-dev/changelog.Debian install -p -m0644 ./CHANGELOG debian/libopenms-dev/usr/share/doc/libopenms-dev/changelog install -m0755 -d debian/openms-doc/usr/share/doc/openms-doc install -p -m0644 debian/.debhelper/generated/openms-doc/dh_installchangelogs.dch.trimmed debian/openms-doc/usr/share/doc/openms-doc/changelog.Debian install -p -m0644 ./CHANGELOG debian/openms-doc/usr/share/doc/openms-doc/changelog install -m0755 -d debian/openms/usr/share/doc/openms install -p -m0644 debian/.debhelper/generated/openms/dh_installchangelogs.dch.trimmed debian/openms/usr/share/doc/openms/changelog.Debian install -p -m0644 ./CHANGELOG debian/openms/usr/share/doc/openms/changelog install -m0755 -d debian/topp/usr/share/doc/topp install -p -m0644 debian/.debhelper/generated/topp/dh_installchangelogs.dch.trimmed debian/topp/usr/share/doc/topp/changelog.Debian install -p -m0644 ./CHANGELOG debian/topp/usr/share/doc/topp/changelog dh_installexamples -O--buildsystem=cmake -O--no-parallel dh_installman -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/share/man/man3/ install -p -m0644 ./debian/libopenms.3 debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 install -m0755 -d debian/topp/usr/share/man/man1/ install -p -m0644 ./debian/topp.1 debian/topp/usr/share/man/man1/topp.1 install -m0755 -d debian/openms-common/usr/share/man/man7/ install -p -m0644 ./debian/openms-common.7 debian/openms-common/usr/share/man/man7/openms-common.7 install -m0755 -d debian/openms-doc/usr/share/man/man7/ install -p -m0644 ./debian/openms-doc.7 debian/openms-doc/usr/share/man/man7/openms-doc.7 install -m0755 -d debian/openms/usr/share/man/man7/ install -p -m0644 ./debian/openms.7 debian/openms/usr/share/man/man7/openms.7 man-recode --to-code UTF-8 --suffix .dh-new debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 man-recode --to-code UTF-8 --suffix .dh-new debian/topp/usr/share/man/man1/topp.1 man-recode --to-code UTF-8 --suffix .dh-new debian/openms-common/usr/share/man/man7/openms-common.7 man-recode --to-code UTF-8 --suffix .dh-new debian/openms-doc/usr/share/man/man7/openms-doc.7 man-recode --to-code UTF-8 --suffix .dh-new debian/openms/usr/share/man/man7/openms.7 mv debian/openms/usr/share/man/man7/openms.7.dh-new debian/openms/usr/share/man/man7/openms.7 chmod 0644 -- debian/openms/usr/share/man/man7/openms.7 mv debian/topp/usr/share/man/man1/topp.1.dh-new debian/topp/usr/share/man/man1/topp.1 chmod 0644 -- debian/topp/usr/share/man/man1/topp.1 mv debian/libopenms2.6.0/usr/share/man/man3/libopenms.3.dh-new debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 chmod 0644 -- debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 mv debian/openms-common/usr/share/man/man7/openms-common.7.dh-new debian/openms-common/usr/share/man/man7/openms-common.7 chmod 0644 -- debian/openms-common/usr/share/man/man7/openms-common.7 mv debian/openms-doc/usr/share/man/man7/openms-doc.7.dh-new debian/openms-doc/usr/share/man/man7/openms-doc.7 chmod 0644 -- debian/openms-doc/usr/share/man/man7/openms-doc.7 dh_installcatalogs -O--buildsystem=cmake -O--no-parallel dh_installcron -O--buildsystem=cmake -O--no-parallel dh_installdebconf -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN install -m0755 -d debian/libopenms-dev/DEBIAN install -m0755 -d debian/topp/DEBIAN install -m0755 -d debian/openms-common/DEBIAN install -m0755 -d debian/openms-doc/DEBIAN install -m0755 -d debian/openms/DEBIAN dh_installemacsen -O--buildsystem=cmake -O--no-parallel dh_installifupdown -O--buildsystem=cmake -O--no-parallel dh_installinfo -O--buildsystem=cmake -O--no-parallel dh_installinit -O--buildsystem=cmake -O--no-parallel dh_installsystemd -O--buildsystem=cmake -O--no-parallel dh_installsystemduser -O--buildsystem=cmake -O--no-parallel dh_installmenu -O--buildsystem=cmake -O--no-parallel dh_installmime -O--buildsystem=cmake -O--no-parallel dh_installmodules -O--buildsystem=cmake -O--no-parallel dh_installlogcheck -O--buildsystem=cmake -O--no-parallel dh_installlogrotate -O--buildsystem=cmake -O--no-parallel dh_installpam -O--buildsystem=cmake -O--no-parallel dh_installppp -O--buildsystem=cmake -O--no-parallel dh_installudev -O--buildsystem=cmake -O--no-parallel dh_installgsettings -O--buildsystem=cmake -O--no-parallel dh_installinitramfs -O--buildsystem=cmake -O--no-parallel dh_installalternatives -O--buildsystem=cmake -O--no-parallel dh_bugfiles -O--buildsystem=cmake -O--no-parallel dh_ucf -O--buildsystem=cmake -O--no-parallel dh_lintian -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/share/lintian/overrides install -p -m0644 debian/libopenms2.6.0.lintian-overrides debian/libopenms2.6.0/usr/share/lintian/overrides/libopenms2.6.0 install -m0755 -d debian/topp/usr/share/lintian/overrides install -p -m0644 debian/topp.lintian-overrides debian/topp/usr/share/lintian/overrides/topp dh_icons -O--buildsystem=cmake -O--no-parallel dh_perl -O--buildsystem=cmake -O--no-parallel dh_usrlocal -O--buildsystem=cmake -O--no-parallel dh_link -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2 ln -s libSuperHirn.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2 install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2 ln -s libOpenSwathAlgo.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2 install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2 ln -s libOpenMS_GUI.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2 install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2 ln -s libOpenMS.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2 install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libSuperHirn.so ln -s libSuperHirn.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libSuperHirn.so install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so ln -s libOpenSwathAlgo.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS_GUI.so ln -s libOpenMS_GUI.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS_GUI.so install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS.so ln -s libOpenMS.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS.so install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/rules.1 ln -s topp.1 debian/topp/usr/share/man/man1/rules.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.links.1 ln -s topp.1 debian/topp/usr/share/man/man1/libopenms2.6.0.links.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.install.1 ln -s topp.1 debian/topp/usr/share/man/man1/libopenms2.6.0.install.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/libopenms-dev.links.1 ln -s topp.1 debian/topp/usr/share/man/man1/libopenms-dev.links.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1 ln -s topp.1 debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1 dh_installwm -O--buildsystem=cmake -O--no-parallel dh_installxfonts -O--buildsystem=cmake -O--no-parallel dh_strip_nondeterminism -O--buildsystem=cmake -O--no-parallel Using 1703341241 as canonical time Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_menu.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_BSA_results_3d.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Kernel_DataPoints.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_1_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/sync_off.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_1.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_s.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/bc_s.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_example_profile_data_processing.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_g.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_2.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_3.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Spectrum3DWidget.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/SILACAnalyzer_algorithm.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_labelfree_quant.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/splitbard.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_6_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_h.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_bd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_labeled_quant.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/bc_sd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_help.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Terms_Map.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_raw_data.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_consensus_id.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/splitbar.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_6.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/SwathWizard.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_alignment.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_statistics.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Spectrum2DWidget.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_4_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/sync_on.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_2_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_3_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_edges.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_7_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_example_merger.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/open.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_run_options.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_BSA_Quantitation.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_7.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_hd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_8_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_qualitycontrol.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_5_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/OpenMS_overview.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_a.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_parameters.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_9.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_simple_example.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_b.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_0.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/MetaDataBrowser.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_Ecoli_Identification.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/closed.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_0_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_1D.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/OpenMS_75x55_transparent.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_hd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_baseline.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_fd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_4.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_5.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_baseline_filtered.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_sd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_8.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_f.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_BSA_results_2d.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_9_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/INIFileEditor.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_ff_centroided.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_noisefilter.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Terms_Spectrum.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_ad.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_pp_picked.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_h.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_noisefilter_filtered.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_icons.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_parts.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=cmake -O--no-parallel cd debian/libopenms2.6.0 cd debian/libopenms-dev cd debian/topp cd debian/openms-common cd debian/openms-doc cd debian/openms chmod a-x usr/share/doc/libopenms-dev/changelog usr/share/doc/libopenms-dev/changelog.Debian gzip -9nf usr/share/doc/libopenms-dev/changelog usr/share/doc/libopenms-dev/changelog.Debian chmod a-x usr/share/doc/topp/changelog usr/share/doc/topp/changelog.Debian usr/share/man/man1/topp.1 chmod a-x usr/share/doc/openms/changelog usr/share/doc/openms/changelog.Debian usr/share/man/man7/openms.7 chmod a-x usr/share/doc/openms-common/changelog usr/share/doc/openms-common/changelog.Debian usr/share/man/man7/openms-common.7 chmod a-x usr/share/doc/libopenms2.6.0/changelog usr/share/doc/libopenms2.6.0/changelog.Debian usr/share/man/man3/libopenms.3 gzip -9nf usr/share/doc/topp/changelog usr/share/doc/topp/changelog.Debian usr/share/man/man1/topp.1 gzip -9nf usr/share/doc/openms/changelog usr/share/doc/openms/changelog.Debian usr/share/man/man7/openms.7 gzip -9nf usr/share/doc/openms-common/changelog usr/share/doc/openms-common/changelog.Debian usr/share/man/man7/openms-common.7 gzip -9nf usr/share/doc/libopenms2.6.0/changelog usr/share/doc/libopenms2.6.0/changelog.Debian usr/share/man/man3/libopenms.3 cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.install.1 debian/topp/usr/share/man/man1/libopenms2.6.0.install.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/libopenms2.6.0.install.1.gz rm -f debian/topp/usr/share/man/man1/libopenms-dev.links.1 debian/topp/usr/share/man/man1/libopenms-dev.links.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/libopenms-dev.links.1.gz rm -f debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1 debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1.gz rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.links.1 debian/topp/usr/share/man/man1/libopenms2.6.0.links.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/libopenms2.6.0.links.1.gz rm -f debian/topp/usr/share/man/man1/rules.1 debian/topp/usr/share/man/man1/rules.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/rules.1.gz chmod a-x usr/share/doc/openms-doc/changelog usr/share/doc/openms-doc/changelog.Debian usr/share/doc/openms/tutorials/OpenMS_tutorial.pdf usr/share/doc/openms/tutorials/TOPP_tutorial.pdf usr/share/man/man7/openms-doc.7 gzip -9nf usr/share/doc/openms-doc/changelog usr/share/doc/openms-doc/changelog.Debian usr/share/doc/openms/tutorials/OpenMS_tutorial.pdf usr/share/doc/openms/tutorials/TOPP_tutorial.pdf usr/share/man/man7/openms-doc.7 cd '/build/reproducible-path/openms-2.6.0+cleaned1' dh_fixperms -O--buildsystem=cmake -O--no-parallel find debian/libopenms2.6.0 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libopenms-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/topp -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms-common -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms2.6.0 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/openms/usr/share/doc -type f -a -true -a ! -regex 'debian/openms/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms2.6.0/usr/share/doc -type f -a -true -a ! -regex 'debian/libopenms2.6.0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libopenms2.6.0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/openms/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms2.6.0/usr/share/man debian/libopenms2.6.0/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-common ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms2.6.0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms2.6.0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/openms-common/usr/share/doc -type f -a -true -a ! -regex 'debian/openms-common/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp/usr/share/doc -type f -a -true -a ! -regex 'debian/topp/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-common/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/topp/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/openms-common/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp/usr/share/man debian/topp/usr/share/applications debian/topp/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-common -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libopenms-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/openms-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libopenms-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libopenms-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/openms-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/openms-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/openms-doc/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing -O--buildsystem=cmake -O--no-parallel dh_missing: warning: usr/lib/i386-linux-gnu/libOpenMS.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/i386-linux-gnu/libOpenMS_GUI.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/i386-linux-gnu/libOpenSwathAlgo.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/i386-linux-gnu/libSuperHirn.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/libOpenMS.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0") dh_missing: warning: usr/lib/libOpenMS_GUI.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0") dh_missing: warning: usr/lib/libOpenSwathAlgo.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0") dh_missing: warning: usr/lib/libSuperHirn.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0") dh_missing: warning: usr/share/openms/THIRDPARTY/ReadMe.txt exists in debian/tmp but is not installed to anywhere While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * debian/tmp/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 with: * usr/lib/libOpenMS.so.2.6.0 in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_install: libopenms-dev (2), libopenms2.6.0 (4), openms (0), openms-common (11), openms-doc (5), topp (185) * dh_installdocs: libopenms-dev (0), libopenms2.6.0 (0), openms (1), openms-common (0), openms-doc (0), topp (0) * dh_installexamples: libopenms-dev (0), libopenms2.6.0 (0), openms (0), openms-common (0), openms-doc (0), topp (0) * dh_installinfo: libopenms-dev (0), libopenms2.6.0 (0), openms (0), openms-common (0), openms-doc (0), topp (0) * dh_installman: libopenms-dev (0), libopenms2.6.0 (1), openms (1), openms-common (1), openms-doc (1), topp (1) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "i386-linux-gnu", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu dwz -mdebian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug -- debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 install -m0755 -d debian/topp/usr/lib/debug/.dwz/i386-linux-gnu dwz -mdebian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug -- debian/topp/usr/bin/AccurateMassSearch debian/topp/usr/bin/AssayGeneratorMetabo debian/topp/usr/bin/BaselineFilter debian/topp/usr/bin/CVInspector debian/topp/usr/bin/ClusterMassTraces debian/topp/usr/bin/ClusterMassTracesByPrecursor debian/topp/usr/bin/CometAdapter debian/topp/usr/bin/CompNovo debian/topp/usr/bin/CompNovoCID debian/topp/usr/bin/ConsensusID debian/topp/usr/bin/ConsensusMapNormalizer debian/topp/usr/bin/CruxAdapter debian/topp/usr/bin/DTAExtractor debian/topp/usr/bin/DatabaseFilter debian/topp/usr/bin/DatabaseSuitability debian/topp/usr/bin/DeMeanderize debian/topp/usr/bin/Decharger debian/topp/usr/bin/DecoyDatabase debian/topp/usr/bin/Digestor debian/topp/usr/bin/DigestorMotif debian/topp/usr/bin/EICExtractor debian/topp/usr/bin/ERPairFinder debian/topp/usr/bin/Epifany debian/topp/usr/bin/ExecutePipeline debian/topp/usr/bin/ExternalCalibration debian/topp/usr/bin/FFEval debian/topp/usr/bin/FalseDiscoveryRate debian/topp/usr/bin/FeatureFinderCentroided debian/topp/usr/bin/FeatureFinderIdentification debian/topp/usr/bin/FeatureFinderIsotopeWavelet debian/topp/usr/bin/FeatureFinderMRM debian/topp/usr/bin/FeatureFinderMetabo debian/topp/usr/bin/FeatureFinderMetaboIdent debian/topp/usr/bin/FeatureFinderMultiplex debian/topp/usr/bin/FeatureFinderSuperHirn debian/topp/usr/bin/FeatureLinkerLabeled debian/topp/usr/bin/FeatureLinkerUnlabeled debian/topp/usr/bin/FeatureLinkerUnlabeledKD debian/topp/usr/bin/FeatureLinkerUnlabeledQT debian/topp/usr/bin/FidoAdapter debian/topp/usr/bin/FileConverter debian/topp/usr/bin/FileFilter debian/topp/usr/bin/FileInfo debian/topp/usr/bin/FileMerger debian/topp/usr/bin/FuzzyDiff debian/topp/usr/bin/GNPSExport debian/topp/usr/bin/GenericWrapper debian/topp/usr/bin/HighResPrecursorMassCorrector debian/topp/usr/bin/IDConflictResolver debian/topp/usr/bin/IDDecoyProbability debian/topp/usr/bin/IDExtractor debian/topp/usr/bin/IDFileConverter debian/topp/usr/bin/IDFilter debian/topp/usr/bin/IDMapper debian/topp/usr/bin/IDMassAccuracy debian/topp/usr/bin/IDMerger debian/topp/usr/bin/IDPosteriorErrorProbability debian/topp/usr/bin/IDRTCalibration debian/topp/usr/bin/IDRipper debian/topp/usr/bin/IDScoreSwitcher debian/topp/usr/bin/IDSplitter debian/topp/usr/bin/INIFileEditor debian/topp/usr/bin/INIUpdater debian/topp/usr/bin/ImageCreator debian/topp/usr/bin/InclusionExclusionListCreator debian/topp/usr/bin/InspectAdapter debian/topp/usr/bin/InternalCalibration debian/topp/usr/bin/IsobaricAnalyzer debian/topp/usr/bin/LabeledEval debian/topp/usr/bin/LuciphorAdapter debian/topp/usr/bin/MRMMapper debian/topp/usr/bin/MRMPairFinder debian/topp/usr/bin/MRMTransitionGroupPicker debian/topp/usr/bin/MSFraggerAdapter debian/topp/usr/bin/MSGFPlusAdapter debian/topp/usr/bin/MSSimulator debian/topp/usr/bin/MSstatsConverter debian/topp/usr/bin/MaRaClusterAdapter debian/topp/usr/bin/MapAlignerIdentification debian/topp/usr/bin/MapAlignerPoseClustering debian/topp/usr/bin/MapAlignerSpectrum debian/topp/usr/bin/MapAlignerTreeGuided debian/topp/usr/bin/MapNormalizer debian/topp/usr/bin/MapRTTransformer debian/topp/usr/bin/MapStatistics debian/topp/usr/bin/MascotAdapter debian/topp/usr/bin/MascotAdapterOnline debian/topp/usr/bin/MassCalculator debian/topp/usr/bin/MassTraceExtractor debian/topp/usr/bin/MetaProSIP debian/topp/usr/bin/MetaboliteAdductDecharger debian/topp/usr/bin/MetaboliteSpectralMatcher debian/topp/usr/bin/MultiplexResolver debian/topp/usr/bin/MyriMatchAdapter debian/topp/usr/bin/MzMLSplitter debian/topp/usr/bin/MzTabExporter debian/topp/usr/bin/NoiseFilterGaussian debian/topp/usr/bin/NoiseFilterSGolay debian/topp/usr/bin/NovorAdapter debian/topp/usr/bin/NucleicAcidSearchEngine debian/topp/usr/bin/OMSSAAdapter debian/topp/usr/bin/OpenMSInfo debian/topp/usr/bin/OpenPepXL debian/topp/usr/bin/OpenPepXLLF debian/topp/usr/bin/OpenSwathAnalyzer debian/topp/usr/bin/OpenSwathAssayGenerator debian/topp/usr/bin/OpenSwathChromatogramExtractor debian/topp/usr/bin/OpenSwathConfidenceScoring debian/topp/usr/bin/OpenSwathDIAPreScoring debian/topp/usr/bin/OpenSwathDecoyGenerator debian/topp/usr/bin/OpenSwathFeatureXMLToTSV debian/topp/usr/bin/OpenSwathFileSplitter debian/topp/usr/bin/OpenSwathMzMLFileCacher debian/topp/usr/bin/OpenSwathRTNormalizer debian/topp/usr/bin/OpenSwathRewriteToFeatureXML debian/topp/usr/bin/OpenSwathWorkflow debian/topp/usr/bin/PSMFeatureExtractor debian/topp/usr/bin/PTModel debian/topp/usr/bin/PTPredict debian/topp/usr/bin/PeakPickerHiRes debian/topp/usr/bin/PeakPickerIterative debian/topp/usr/bin/PeakPickerWavelet debian/topp/usr/bin/PepNovoAdapter debian/topp/usr/bin/PeptideIndexer debian/topp/usr/bin/PercolatorAdapter debian/topp/usr/bin/PhosphoScoring debian/topp/usr/bin/PrecursorIonSelector debian/topp/usr/bin/PrecursorMassCorrector debian/topp/usr/bin/ProteinInference debian/topp/usr/bin/ProteinQuantifier debian/topp/usr/bin/ProteinResolver debian/topp/usr/bin/ProteomicsLFQ debian/topp/usr/bin/QCCalculator debian/topp/usr/bin/QCEmbedder debian/topp/usr/bin/QCExporter debian/topp/usr/bin/QCExtractor debian/topp/usr/bin/QCImporter debian/topp/usr/bin/QCMerger debian/topp/usr/bin/QCShrinker debian/topp/usr/bin/QualityControl debian/topp/usr/bin/RNADigestor debian/topp/usr/bin/RNAMassCalculator debian/topp/usr/bin/RNPxlSearch debian/topp/usr/bin/RNPxlXICFilter debian/topp/usr/bin/RTEvaluation debian/topp/usr/bin/RTModel debian/topp/usr/bin/RTPredict debian/topp/usr/bin/Resampler debian/topp/usr/bin/SeedListGenerator debian/topp/usr/bin/SemanticValidator debian/topp/usr/bin/SequenceCoverageCalculator debian/topp/usr/bin/SimpleSearchEngine debian/topp/usr/bin/SiriusAdapter debian/topp/usr/bin/SpecLibCreator debian/topp/usr/bin/SpecLibSearcher debian/topp/usr/bin/SpectraFilterBernNorm debian/topp/usr/bin/SpectraFilterMarkerMower debian/topp/usr/bin/SpectraFilterNLargest debian/topp/usr/bin/SpectraFilterNormalizer debian/topp/usr/bin/SpectraFilterParentPeakMower debian/topp/usr/bin/SpectraFilterScaler debian/topp/usr/bin/SpectraFilterSqrtMower debian/topp/usr/bin/SpectraFilterThresholdMower debian/topp/usr/bin/SpectraFilterWindowMower debian/topp/usr/bin/SpectraMerger debian/topp/usr/bin/SpectraSTSearchAdapter debian/topp/usr/bin/StaticModification debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/topp/usr/bin/SwathWizard debian/topp/usr/bin/TICCalculator debian/topp/usr/bin/TOFCalibration debian/topp/usr/bin/TOPPAS debian/topp/usr/bin/TOPPView debian/topp/usr/bin/TargetedFileConverter debian/topp/usr/bin/TextExporter debian/topp/usr/bin/TransformationEvaluation debian/topp/usr/bin/XFDR debian/topp/usr/bin/XMLValidator debian/topp/usr/bin/XTandemAdapter objcopy --compress-debug-sections debian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug chmod 0644 -- debian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug chown 0:0 -- debian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug dwz: debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0: DWARF compression not beneficial - old size 323350548 new size 324888362 objcopy --compress-debug-sections debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug chmod 0644 -- debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug chown 0:0 -- debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug dh_strip -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/d4 objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/d4/38b139bea39599125cad844013957e978b191e.debug install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MRMTransitionGroupPicker debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/1dcc507babdaf8848889ca5934e9d2eec0925d.debug chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/d4/38b139bea39599125cad844013957e978b191e.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/d4/38b139bea39599125cad844013957e978b191e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/d4/38b139bea39599125cad844013957e978b191e.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/1f objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/1f/6b63ecd907de26af4891e35bb6f99e399a47c2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/1dcc507babdaf8848889ca5934e9d2eec0925d.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/1dcc507babdaf8848889ca5934e9d2eec0925d.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MRMTransitionGroupPicker objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/1dcc507babdaf8848889ca5934e9d2eec0925d.debug debian/topp/usr/bin/MRMTransitionGroupPicker install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/12 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathRewriteToFeatureXML debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/12/82a63a9cf98c64b09d352d713c9899748e5391.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/12/82a63a9cf98c64b09d352d713c9899748e5391.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/12/82a63a9cf98c64b09d352d713c9899748e5391.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathRewriteToFeatureXML objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/12/82a63a9cf98c64b09d352d713c9899748e5391.debug debian/topp/usr/bin/OpenSwathRewriteToFeatureXML install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/61 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCMerger debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/61/2d5dab1bd53e275fc050844e525e71051081ec.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/61/2d5dab1bd53e275fc050844e525e71051081ec.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/61/2d5dab1bd53e275fc050844e525e71051081ec.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCMerger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/61/2d5dab1bd53e275fc050844e525e71051081ec.debug debian/topp/usr/bin/QCMerger install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/StaticModification debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8a/5209b8a44a8d586b72789384eeae842bfabc12.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8a/5209b8a44a8d586b72789384eeae842bfabc12.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8a/5209b8a44a8d586b72789384eeae842bfabc12.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/StaticModification objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8a/5209b8a44a8d586b72789384eeae842bfabc12.debug debian/topp/usr/bin/StaticModification install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fd objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TOPPAS debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fd/0b07c72adfe471e666d72c00b24eac6dae95aa.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fd/0b07c72adfe471e666d72c00b24eac6dae95aa.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fd/0b07c72adfe471e666d72c00b24eac6dae95aa.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TOPPAS objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fd/0b07c72adfe471e666d72c00b24eac6dae95aa.debug debian/topp/usr/bin/TOPPAS install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TransformationEvaluation debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f1/03a41ef7d3b55b41e2c14544476e4c486f1700.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f1/03a41ef7d3b55b41e2c14544476e4c486f1700.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f1/03a41ef7d3b55b41e2c14544476e4c486f1700.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TransformationEvaluation objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f1/03a41ef7d3b55b41e2c14544476e4c486f1700.debug debian/topp/usr/bin/TransformationEvaluation install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b9 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/Decharger debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b9/d572ba8a7029c05cb183810bdf5752799e0fe5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b9/d572ba8a7029c05cb183810bdf5752799e0fe5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b9/d572ba8a7029c05cb183810bdf5752799e0fe5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/Decharger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b9/d572ba8a7029c05cb183810bdf5752799e0fe5.debug debian/topp/usr/bin/Decharger install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MSstatsConverter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/57d283b7269a9be23ef5c98b7cfd94f28dc658.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/57d283b7269a9be23ef5c98b7cfd94f28dc658.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/57d283b7269a9be23ef5c98b7cfd94f28dc658.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MSstatsConverter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/57d283b7269a9be23ef5c98b7cfd94f28dc658.debug debian/topp/usr/bin/MSstatsConverter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/32 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterNLargest debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/32/02fabd4e9f15dde27d2f9cefd1bf1c9f13d910.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/32/02fabd4e9f15dde27d2f9cefd1bf1c9f13d910.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/32/02fabd4e9f15dde27d2f9cefd1bf1c9f13d910.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterNLargest objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/32/02fabd4e9f15dde27d2f9cefd1bf1c9f13d910.debug debian/topp/usr/bin/SpectraFilterNLargest install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ERPairFinder debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/0ae804064a0778d514ddf5639b3e2a673aab18.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/0ae804064a0778d514ddf5639b3e2a673aab18.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/0ae804064a0778d514ddf5639b3e2a673aab18.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ERPairFinder objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/0ae804064a0778d514ddf5639b3e2a673aab18.debug debian/topp/usr/bin/ERPairFinder install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/93 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PrecursorIonSelector debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/93/1c9f6f754630748a92ca5996b6e5e3dc5eab5a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/93/1c9f6f754630748a92ca5996b6e5e3dc5eab5a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/93/1c9f6f754630748a92ca5996b6e5e3dc5eab5a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PrecursorIonSelector objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/93/1c9f6f754630748a92ca5996b6e5e3dc5eab5a.debug debian/topp/usr/bin/PrecursorIonSelector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/22 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ExecutePipeline debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/22/f6996fdd5b2d5a6a5c57f54e38b0c4685fa267.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/22/f6996fdd5b2d5a6a5c57f54e38b0c4685fa267.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/22/f6996fdd5b2d5a6a5c57f54e38b0c4685fa267.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ExecutePipeline objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/22/f6996fdd5b2d5a6a5c57f54e38b0c4685fa267.debug debian/topp/usr/bin/ExecutePipeline install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCExporter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/d34f71996010c8642682a1ac78867ed6c8939f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/d34f71996010c8642682a1ac78867ed6c8939f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/d34f71996010c8642682a1ac78867ed6c8939f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCExporter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/d34f71996010c8642682a1ac78867ed6c8939f.debug debian/topp/usr/bin/QCExporter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e5 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e5/1d98420bb35b83f190e92a66404dc65a261d4d.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e5/1d98420bb35b83f190e92a66404dc65a261d4d.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e5/1d98420bb35b83f190e92a66404dc65a261d4d.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e5/1d98420bb35b83f190e92a66404dc65a261d4d.debug debian/topp/usr/bin/IDFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapRTTransformer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/7fa4fd3a6c64816456e6eded12e67f4a04da16.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/7fa4fd3a6c64816456e6eded12e67f4a04da16.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/7fa4fd3a6c64816456e6eded12e67f4a04da16.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapRTTransformer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/7fa4fd3a6c64816456e6eded12e67f4a04da16.debug debian/topp/usr/bin/MapRTTransformer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/df objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/Epifany debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/df/c9723309241d3c2bdbaeef21d2e1d018d78d59.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/df/c9723309241d3c2bdbaeef21d2e1d018d78d59.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/df/c9723309241d3c2bdbaeef21d2e1d018d78d59.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/Epifany objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/df/c9723309241d3c2bdbaeef21d2e1d018d78d59.debug debian/topp/usr/bin/Epifany install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RTPredict debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/393a216df103084c7f867f51186a32c2294aad.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/393a216df103084c7f867f51186a32c2294aad.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/393a216df103084c7f867f51186a32c2294aad.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RTPredict objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/393a216df103084c7f867f51186a32c2294aad.debug debian/topp/usr/bin/RTPredict install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MascotAdapterOnline debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3/d3d4c5eaaf4f3e869af6eae25c7b5dc69d4ead.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3/d3d4c5eaaf4f3e869af6eae25c7b5dc69d4ead.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3/d3d4c5eaaf4f3e869af6eae25c7b5dc69d4ead.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MascotAdapterOnline objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3/d3d4c5eaaf4f3e869af6eae25c7b5dc69d4ead.debug debian/topp/usr/bin/MascotAdapterOnline install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FuzzyDiff debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70/3bb4ff41097865cdb4cbc6e958eb7d1d9bfedd.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70/3bb4ff41097865cdb4cbc6e958eb7d1d9bfedd.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70/3bb4ff41097865cdb4cbc6e958eb7d1d9bfedd.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FuzzyDiff objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70/3bb4ff41097865cdb4cbc6e958eb7d1d9bfedd.debug debian/topp/usr/bin/FuzzyDiff install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/NovorAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/69d5addb9ed2a03dc7398ba56adfd6f91a7e31.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/69d5addb9ed2a03dc7398ba56adfd6f91a7e31.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/69d5addb9ed2a03dc7398ba56adfd6f91a7e31.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/NovorAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/69d5addb9ed2a03dc7398ba56adfd6f91a7e31.debug debian/topp/usr/bin/NovorAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FidoAdapter 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1c/cf7111e42cbccd1f669c4847e0950b90d160d0.debug debian/topp/usr/bin/SemanticValidator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RTModel debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/54c1c182b24153585696532eb5b65d519d0d7c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/54c1c182b24153585696532eb5b65d519d0d7c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/54c1c182b24153585696532eb5b65d519d0d7c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RTModel objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/54c1c182b24153585696532eb5b65d519d0d7c.debug debian/topp/usr/bin/RTModel install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/XFDR debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/d141f59484f2f75218bc8137f4a331d0baba6a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/d141f59484f2f75218bc8137f4a331d0baba6a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/d141f59484f2f75218bc8137f4a331d0baba6a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/XFDR objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/d141f59484f2f75218bc8137f4a331d0baba6a.debug debian/topp/usr/bin/XFDR install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/59 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ConsensusID debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/59/261c49c1a609b6b4d72242d9ec7a148f593db8.debug chmod 0644 -- 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strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PepNovoAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/480a03cfcde1a44bac9d083273f1c8bcf70d68.debug debian/topp/usr/bin/PepNovoAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenPepXLLF debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74/dbc42f9277fd4efbebd96cc0aba9de1a689ab0.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74/dbc42f9277fd4efbebd96cc0aba9de1a689ab0.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74/dbc42f9277fd4efbebd96cc0aba9de1a689ab0.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenPepXLLF objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74/dbc42f9277fd4efbebd96cc0aba9de1a689ab0.debug debian/topp/usr/bin/OpenPepXLLF install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e9 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathRTNormalizer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e9/25e56d5d2c37abeaeaafe4bfdce4c951131fb4.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e9/25e56d5d2c37abeaeaafe4bfdce4c951131fb4.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e9/25e56d5d2c37abeaeaafe4bfdce4c951131fb4.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathRTNormalizer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e9/25e56d5d2c37abeaeaafe4bfdce4c951131fb4.debug debian/topp/usr/bin/OpenSwathRTNormalizer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/94 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ImageCreator 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a0/c94682f2b5f54282e17d90cd319d5dfa4bbfd5.debug debian/topp/usr/bin/MapAlignerPoseClustering install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PercolatorAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/be/8dd97d63695e7a670f8381b09d9e0d1b6fd31a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/be/8dd97d63695e7a670f8381b09d9e0d1b6fd31a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/be/8dd97d63695e7a670f8381b09d9e0d1b6fd31a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PercolatorAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/be/8dd97d63695e7a670f8381b09d9e0d1b6fd31a.debug debian/topp/usr/bin/PercolatorAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DeMeanderize debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/2d5306ebf5f0e26d3d8f1d6dbe505772ceeebd.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/2d5306ebf5f0e26d3d8f1d6dbe505772ceeebd.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/2d5306ebf5f0e26d3d8f1d6dbe505772ceeebd.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DeMeanderize objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/2d5306ebf5f0e26d3d8f1d6dbe505772ceeebd.debug debian/topp/usr/bin/DeMeanderize install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapNormalizer 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ae/a3f765e689a57741695cfcc86e54c2f66befe5.debug debian/topp/usr/bin/AccurateMassSearch install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderMetabo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/ce29a6c823952d6a7866b8f8af196275ba1e31.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/ce29a6c823952d6a7866b8f8af196275ba1e31.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/ce29a6c823952d6a7866b8f8af196275ba1e31.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderMetabo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/ce29a6c823952d6a7866b8f8af196275ba1e31.debug debian/topp/usr/bin/FeatureFinderMetabo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ClusterMassTracesByPrecursor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/5199748a5803ffa622c89427ed2bdda722b929.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/5199748a5803ffa622c89427ed2bdda722b929.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/5199748a5803ffa622c89427ed2bdda722b929.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ClusterMassTracesByPrecursor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/5199748a5803ffa622c89427ed2bdda722b929.debug debian/topp/usr/bin/ClusterMassTracesByPrecursor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MassTraceExtractor 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/a3db9723155b7d731f69b74be8d5313711dbaa.debug debian/topp/usr/bin/CompNovoCID install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteinInference debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3/be9c91166f939ab453fa5009b9ab9ed11bee86.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3/be9c91166f939ab453fa5009b9ab9ed11bee86.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3/be9c91166f939ab453fa5009b9ab9ed11bee86.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ProteinInference objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d3/be9c91166f939ab453fa5009b9ab9ed11bee86.debug debian/topp/usr/bin/ProteinInference install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a8 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TOFCalibration debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a8/a5b1b61c3f5ba8499f1f9410ccb325ae87b408.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a8/a5b1b61c3f5ba8499f1f9410ccb325ae87b408.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a8/a5b1b61c3f5ba8499f1f9410ccb325ae87b408.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TOFCalibration objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a8/a5b1b61c3f5ba8499f1f9410ccb325ae87b408.debug debian/topp/usr/bin/TOFCalibration install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TextExporter 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PeakPickerIterative debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/cf64ab0f5b41b29280fc0bc47ea0ef773e287c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/cf64ab0f5b41b29280fc0bc47ea0ef773e287c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/cf64ab0f5b41b29280fc0bc47ea0ef773e287c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PeakPickerIterative objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/cf64ab0f5b41b29280fc0bc47ea0ef773e287c.debug debian/topp/usr/bin/PeakPickerIterative install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/EICExtractor 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/63/b157bb66f849190889034eb86a486a1ffff997.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/63/b157bb66f849190889034eb86a486a1ffff997.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderIdentification objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/63/b157bb66f849190889034eb86a486a1ffff997.debug debian/topp/usr/bin/FeatureFinderIdentification install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ExternalCalibration debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b7/1be2f3781b78204cc9ecf75558b99760e96769.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b7/1be2f3781b78204cc9ecf75558b99760e96769.debug chown 0:0 -- 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6d/e488162a816a75490638e3c3c72cecbd0edc7b.debug debian/topp/usr/bin/PTModel install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/79 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SeedListGenerator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/79/33a4ce6d1a640f3292556340e5ae795e0f875d.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/79/33a4ce6d1a640f3292556340e5ae795e0f875d.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/79/33a4ce6d1a640f3292556340e5ae795e0f875d.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SeedListGenerator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/79/33a4ce6d1a640f3292556340e5ae795e0f875d.debug debian/topp/usr/bin/SeedListGenerator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/43 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDRipper debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/43/737412c9a8064085ee173db4e4d06c19a2eaac.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/43/737412c9a8064085ee173db4e4d06c19a2eaac.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/43/737412c9a8064085ee173db4e4d06c19a2eaac.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDRipper objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/43/737412c9a8064085ee173db4e4d06c19a2eaac.debug debian/topp/usr/bin/IDRipper install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathChromatogramExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e6/d50b0fc239b7ca37b56f2e4448d72577b6b794.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e6/d50b0fc239b7ca37b56f2e4448d72577b6b794.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e6/d50b0fc239b7ca37b56f2e4448d72577b6b794.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathChromatogramExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e6/d50b0fc239b7ca37b56f2e4448d72577b6b794.debug debian/topp/usr/bin/OpenSwathChromatogramExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDFileConverter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3b/e9c20e1deda5db8b3feaf289a21bef3356d153.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3b/e9c20e1deda5db8b3feaf289a21bef3356d153.debug chown 0:0 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/e9ca20174b62508620d2dcf621e761f8f05267.debug debian/topp/usr/bin/IDMassAccuracy install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DTAExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a/2982391024e6750a47641024a82ad24ceb7cee.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a/2982391024e6750a47641024a82ad24ceb7cee.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a/2982391024e6750a47641024a82ad24ceb7cee.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DTAExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a/2982391024e6750a47641024a82ad24ceb7cee.debug debian/topp/usr/bin/DTAExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapStatistics debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74/a296f322aa510e9aaad0e5ca25bf863d1bd323.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74/a296f322aa510e9aaad0e5ca25bf863d1bd323.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74/a296f322aa510e9aaad0e5ca25bf863d1bd323.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapStatistics objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/74/a296f322aa510e9aaad0e5ca25bf863d1bd323.debug debian/topp/usr/bin/MapStatistics install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SimpleSearchEngine 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objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/98/864691962134f444c9a2caa6cc889b82209ca9.debug debian/topp/usr/bin/OpenSwathMzMLFileCacher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCCalculator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a/848aac99ec2c27a307e48e6365cd1838230bc9.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a/848aac99ec2c27a307e48e6365cd1838230bc9.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a/848aac99ec2c27a307e48e6365cd1838230bc9.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCCalculator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2a/848aac99ec2c27a307e48e6365cd1838230bc9.debug debian/topp/usr/bin/QCCalculator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenPepXL debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/ed6f689de1e93885abd246f5aa5b811924077a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/ed6f689de1e93885abd246f5aa5b811924077a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/ed6f689de1e93885abd246f5aa5b811924077a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenPepXL objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/ed6f689de1e93885abd246f5aa5b811924077a.debug debian/topp/usr/bin/OpenPepXL install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerLabeled 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--remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDMapper objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b5/a7403cfa2936697d9e6ef3b9c80241bf0a8b8c.debug debian/topp/usr/bin/IDMapper install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/LuciphorAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0f/2114ff2fe60112f87f29c607fed3e9cc0f7038.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0f/2114ff2fe60112f87f29c607fed3e9cc0f7038.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0f/2114ff2fe60112f87f29c607fed3e9cc0f7038.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/LuciphorAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0f/2114ff2fe60112f87f29c607fed3e9cc0f7038.debug debian/topp/usr/bin/LuciphorAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TargetedFileConverter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c1/f01e3f1a4ab6d6dc78b6dfe998408e2db9cd88.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c1/f01e3f1a4ab6d6dc78b6dfe998408e2db9cd88.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c1/f01e3f1a4ab6d6dc78b6dfe998408e2db9cd88.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TargetedFileConverter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c1/f01e3f1a4ab6d6dc78b6dfe998408e2db9cd88.debug debian/topp/usr/bin/TargetedFileConverter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/BaselineFilter 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/92/4a2e95fbc43eff99209b3d15d2191363933f3b.debug debian/topp/usr/bin/IDExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/59 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraMerger debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/59/5be22318b48799e9ca6700745c38daf32ffe2a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/59/5be22318b48799e9ca6700745c38daf32ffe2a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/59/5be22318b48799e9ca6700745c38daf32ffe2a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraMerger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/59/5be22318b48799e9ca6700745c38daf32ffe2a.debug debian/topp/usr/bin/SpectraMerger install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/08 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathAssayGenerator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/08/234d7f4bcc73410603e94d7d1a124164ad218f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/08/234d7f4bcc73410603e94d7d1a124164ad218f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/08/234d7f4bcc73410603e94d7d1a124164ad218f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathAssayGenerator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/08/234d7f4bcc73410603e94d7d1a124164ad218f.debug debian/topp/usr/bin/OpenSwathAssayGenerator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RTEvaluation debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/79528e2cfc467a0bca469bba3b3465a25b676f.debug chmod 0644 -- 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strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpecLibSearcher objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6d/ec391edbdf98f654092e36b75dfc9786e8332f.debug debian/topp/usr/bin/SpecLibSearcher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapAlignerTreeGuided debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/6984b2a4cc1af77a56d736f2698c20d346922a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/6984b2a4cc1af77a56d736f2698c20d346922a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/6984b2a4cc1af77a56d736f2698c20d346922a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapAlignerTreeGuided objcopy --add-gnu-debuglink 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--only-keep-debug --compress-debug-sections debian/topp/usr/bin/MetaboliteSpectralMatcher debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a8/8867fbbc06d2e7fad5af778d921d93d7038936.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a8/8867fbbc06d2e7fad5af778d921d93d7038936.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a8/8867fbbc06d2e7fad5af778d921d93d7038936.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MetaboliteSpectralMatcher objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a8/8867fbbc06d2e7fad5af778d921d93d7038936.debug debian/topp/usr/bin/MetaboliteSpectralMatcher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/13 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapAlignerSpectrum debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/13/dda8dfb8415b6b4550a62ac76131c60eed52ee.debug 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debian/topp/usr/bin/MassCalculator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f5 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderMultiplex debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f5/5a7f9d53d4c0d44cc2339f7a5af41441cd64e1.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f5/5a7f9d53d4c0d44cc2339f7a5af41441cd64e1.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f5/5a7f9d53d4c0d44cc2339f7a5af41441cd64e1.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderMultiplex objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f5/5a7f9d53d4c0d44cc2339f7a5af41441cd64e1.debug debian/topp/usr/bin/FeatureFinderMultiplex install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/NucleicAcidSearchEngine debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/0dd7a7445ca825a1e0aed75a853d743710bd9b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/0dd7a7445ca825a1e0aed75a853d743710bd9b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/0dd7a7445ca825a1e0aed75a853d743710bd9b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/NucleicAcidSearchEngine objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/0dd7a7445ca825a1e0aed75a853d743710bd9b.debug debian/topp/usr/bin/NucleicAcidSearchEngine install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/28 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DatabaseSuitability debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/28/251a5c9e5e1418803d244d9fc95c0669cd676c.debug chmod 0644 -- 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/9039a50d11404f706f79d5d99a098344becdcd.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/CVInspector objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/9039a50d11404f706f79d5d99a098344becdcd.debug debian/topp/usr/bin/CVInspector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OMSSAAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d5/94a63892f6d2fb52360bcccfb18e05141400ac.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d5/94a63892f6d2fb52360bcccfb18e05141400ac.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d5/94a63892f6d2fb52360bcccfb18e05141400ac.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OMSSAAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d5/94a63892f6d2fb52360bcccfb18e05141400ac.debug debian/topp/usr/bin/OMSSAAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/27 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QualityControl debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/27/96fb39ec4e2bd10a384f531047e47a78eb113a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/27/96fb39ec4e2bd10a384f531047e47a78eb113a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/27/96fb39ec4e2bd10a384f531047e47a78eb113a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QualityControl objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/27/96fb39ec4e2bd10a384f531047e47a78eb113a.debug debian/topp/usr/bin/QualityControl install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerUnlabeledKD debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a0/c79db6405997502b55bf22d30efefdac9d8049.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a0/c79db6405997502b55bf22d30efefdac9d8049.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a0/c79db6405997502b55bf22d30efefdac9d8049.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureLinkerUnlabeledKD objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a0/c79db6405997502b55bf22d30efefdac9d8049.debug debian/topp/usr/bin/FeatureLinkerUnlabeledKD install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpecLibCreator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/de49dde98fae6fdfd7ef85a80c639f57091ff9.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/de49dde98fae6fdfd7ef85a80c639f57091ff9.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/de49dde98fae6fdfd7ef85a80c639f57091ff9.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpecLibCreator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/de49dde98fae6fdfd7ef85a80c639f57091ff9.debug debian/topp/usr/bin/SpecLibCreator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteinQuantifier debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6c/6019edbe0da0040b0eedd5b2ded91702529691.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6c/6019edbe0da0040b0eedd5b2ded91702529691.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6c/6019edbe0da0040b0eedd5b2ded91702529691.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ProteinQuantifier objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6c/6019edbe0da0040b0eedd5b2ded91702529691.debug debian/topp/usr/bin/ProteinQuantifier install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/78 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathDecoyGenerator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/78/63d8ecd2f35b6ca6dde19237a56cbdf908ffec.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/78/63d8ecd2f35b6ca6dde19237a56cbdf908ffec.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/78/63d8ecd2f35b6ca6dde19237a56cbdf908ffec.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathDecoyGenerator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/78/63d8ecd2f35b6ca6dde19237a56cbdf908ffec.debug debian/topp/usr/bin/OpenSwathDecoyGenerator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/Resampler debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/6b986ea13f3adb8c8385f3b6e20512d7ae6b03.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/6b986ea13f3adb8c8385f3b6e20512d7ae6b03.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/6b986ea13f3adb8c8385f3b6e20512d7ae6b03.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/Resampler objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/6b986ea13f3adb8c8385f3b6e20512d7ae6b03.debug debian/topp/usr/bin/Resampler install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/de objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/NoiseFilterSGolay debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/de/7372ee337fd71b4e2e16af495b5ca33452592f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/de/7372ee337fd71b4e2e16af495b5ca33452592f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/de/7372ee337fd71b4e2e16af495b5ca33452592f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/NoiseFilterSGolay objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/de/7372ee337fd71b4e2e16af495b5ca33452592f.debug debian/topp/usr/bin/NoiseFilterSGolay install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterNormalizer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/799436e8a698fffc541fdb7173a4981664d8ec.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/799436e8a698fffc541fdb7173a4981664d8ec.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/799436e8a698fffc541fdb7173a4981664d8ec.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterNormalizer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/799436e8a698fffc541fdb7173a4981664d8ec.debug debian/topp/usr/bin/SpectraFilterNormalizer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterScaler debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/abed9b4fe1ff2d1d0af9ccc2b8e99832ac3d81.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/abed9b4fe1ff2d1d0af9ccc2b8e99832ac3d81.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/abed9b4fe1ff2d1d0af9ccc2b8e99832ac3d81.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterScaler objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/abed9b4fe1ff2d1d0af9ccc2b8e99832ac3d81.debug debian/topp/usr/bin/SpectraFilterScaler install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ee objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PSMFeatureExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ee/991cd5d99451aa155760cd422c72beb59ef8c0.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ee/991cd5d99451aa155760cd422c72beb59ef8c0.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ee/991cd5d99451aa155760cd422c72beb59ef8c0.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PSMFeatureExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ee/991cd5d99451aa155760cd422c72beb59ef8c0.debug debian/topp/usr/bin/PSMFeatureExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterWindowMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/93885715341dc5878e6f4482caa421043fc5a0.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/93885715341dc5878e6f4482caa421043fc5a0.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/93885715341dc5878e6f4482caa421043fc5a0.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterWindowMower objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/93885715341dc5878e6f4482caa421043fc5a0.debug debian/topp/usr/bin/SpectraFilterWindowMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MzTabExporter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf/9b68c875e34fb25b2858bf38154c1a75a65c88.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf/9b68c875e34fb25b2858bf38154c1a75a65c88.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf/9b68c875e34fb25b2858bf38154c1a75a65c88.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MzTabExporter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf/9b68c875e34fb25b2858bf38154c1a75a65c88.debug debian/topp/usr/bin/MzTabExporter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterParentPeakMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6a/375b0632d3bd6238254a20499d40eb8f9a2079.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6a/375b0632d3bd6238254a20499d40eb8f9a2079.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6a/375b0632d3bd6238254a20499d40eb8f9a2079.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterParentPeakMower objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6a/375b0632d3bd6238254a20499d40eb8f9a2079.debug debian/topp/usr/bin/SpectraFilterParentPeakMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/33 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DecoyDatabase debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/33/b32209c8c01a37b283d558422261e8185ee8dc.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/33/b32209c8c01a37b283d558422261e8185ee8dc.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/33/b32209c8c01a37b283d558422261e8185ee8dc.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DecoyDatabase objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/33/b32209c8c01a37b283d558422261e8185ee8dc.debug debian/topp/usr/bin/DecoyDatabase install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/INIFileEditor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/0a264b8c694aaaa323690ee7bb61f3d3ff0a0b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/0a264b8c694aaaa323690ee7bb61f3d3ff0a0b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/0a264b8c694aaaa323690ee7bb61f3d3ff0a0b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/INIFileEditor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/0a264b8c694aaaa323690ee7bb61f3d3ff0a0b.debug debian/topp/usr/bin/INIFileEditor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FFEval debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/daf69db7c88c1f72f99606e087346651371dd6.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/daf69db7c88c1f72f99606e087346651371dd6.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/daf69db7c88c1f72f99606e087346651371dd6.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FFEval objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/daf69db7c88c1f72f99606e087346651371dd6.debug debian/topp/usr/bin/FFEval install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ec objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RNPxlXICFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ec/78111abb9575b9ba9a56b0feffff898d7d00b9.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ec/78111abb9575b9ba9a56b0feffff898d7d00b9.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ec/78111abb9575b9ba9a56b0feffff898d7d00b9.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RNPxlXICFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ec/78111abb9575b9ba9a56b0feffff898d7d00b9.debug debian/topp/usr/bin/RNPxlXICFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DatabaseFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/e2942717039b606e706901e3dd906ca8bea9ac.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/e2942717039b606e706901e3dd906ca8bea9ac.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/e2942717039b606e706901e3dd906ca8bea9ac.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DatabaseFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/e2942717039b606e706901e3dd906ca8bea9ac.debug debian/topp/usr/bin/DatabaseFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ad objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TOPPView debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ad/a34c8a0a3a5a443314ea02de101814686ce808.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ad/a34c8a0a3a5a443314ea02de101814686ce808.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ad/a34c8a0a3a5a443314ea02de101814686ce808.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TOPPView objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ad/a34c8a0a3a5a443314ea02de101814686ce808.debug debian/topp/usr/bin/TOPPView install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/60 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PrecursorMassCorrector debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/60/a0bede0e46d33b5802053adada78b06df2674e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/60/a0bede0e46d33b5802053adada78b06df2674e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/60/a0bede0e46d33b5802053adada78b06df2674e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PrecursorMassCorrector objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/60/a0bede0e46d33b5802053adada78b06df2674e.debug debian/topp/usr/bin/PrecursorMassCorrector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDRTCalibration debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/10a14870b15396d331aef321dbc59e0aa6041f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/10a14870b15396d331aef321dbc59e0aa6041f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/10a14870b15396d331aef321dbc59e0aa6041f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDRTCalibration objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/10a14870b15396d331aef321dbc59e0aa6041f.debug debian/topp/usr/bin/IDRTCalibration install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/GenericWrapper debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52/ab2c3174335255dcf7deb4ac53cb6f6797cabd.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52/ab2c3174335255dcf7deb4ac53cb6f6797cabd.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52/ab2c3174335255dcf7deb4ac53cb6f6797cabd.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/GenericWrapper objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52/ab2c3174335255dcf7deb4ac53cb6f6797cabd.debug debian/topp/usr/bin/GenericWrapper install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/XTandemAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2/a9a2d7f6f184e5dcc38170f89b375e0deb0ee0.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2/a9a2d7f6f184e5dcc38170f89b375e0deb0ee0.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2/a9a2d7f6f184e5dcc38170f89b375e0deb0ee0.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/XTandemAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2/a9a2d7f6f184e5dcc38170f89b375e0deb0ee0.debug debian/topp/usr/bin/XTandemAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/26 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MRMPairFinder debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/26/92ab077df31b53905ea6df49bd877c597e6f6b.debug chmod 0644 -- 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strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MSGFPlusAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ee/1e3bbe8ab5eeccdf4af7acd47b8b5cde197d91.debug debian/topp/usr/bin/MSGFPlusAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/17 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/17/73f01183bcc86fc80ae24dc1d154b192981dbb.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/17/73f01183bcc86fc80ae24dc1d154b192981dbb.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/17/73f01183bcc86fc80ae24dc1d154b192981dbb.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FileFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/17/73f01183bcc86fc80ae24dc1d154b192981dbb.debug debian/topp/usr/bin/FileFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ConsensusMapNormalizer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e4/1da90327a2c8b7cc3269ae2dda309df41b41df.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e4/1da90327a2c8b7cc3269ae2dda309df41b41df.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e4/1da90327a2c8b7cc3269ae2dda309df41b41df.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ConsensusMapNormalizer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e4/1da90327a2c8b7cc3269ae2dda309df41b41df.debug debian/topp/usr/bin/ConsensusMapNormalizer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dc objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDMerger 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/04/1492170b525fb6265998d5ee5d8bee364dc8a6.debug debian/topp/usr/bin/CompNovo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PeakPickerHiRes debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0/a10a1cec3e42cd9815bc596549a7f157c63100.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0/a10a1cec3e42cd9815bc596549a7f157c63100.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0/a10a1cec3e42cd9815bc596549a7f157c63100.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PeakPickerHiRes objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0/a10a1cec3e42cd9815bc596549a7f157c63100.debug debian/topp/usr/bin/PeakPickerHiRes install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/83 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DigestorMotif debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/83/ccd5f44e38156142a442a913fe07e7d7fab153.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/83/ccd5f44e38156142a442a913fe07e7d7fab153.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/83/ccd5f44e38156142a442a913fe07e7d7fab153.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DigestorMotif objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/83/ccd5f44e38156142a442a913fe07e7d7fab153.debug debian/topp/usr/bin/DigestorMotif install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/AssayGeneratorMetabo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/85/e34ac622dd41b61e9c21d0f3c422681ecd3704.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/85/e34ac622dd41b61e9c21d0f3c422681ecd3704.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/85/e34ac622dd41b61e9c21d0f3c422681ecd3704.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/AssayGeneratorMetabo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/85/e34ac622dd41b61e9c21d0f3c422681ecd3704.debug debian/topp/usr/bin/AssayGeneratorMetabo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDPosteriorErrorProbability debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/b93d44f4bc15243a4392975158b22d95f69643.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/b93d44f4bc15243a4392975158b22d95f69643.debug chown 0:0 -- 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debian/topp/usr/bin/IDDecoyProbability install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MaRaClusterAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b7/9fb92e728532d613b14e8bbdb7d26747bd7a3b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b7/9fb92e728532d613b14e8bbdb7d26747bd7a3b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b7/9fb92e728532d613b14e8bbdb7d26747bd7a3b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MaRaClusterAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b7/9fb92e728532d613b14e8bbdb7d26747bd7a3b.debug debian/topp/usr/bin/MaRaClusterAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileConverter 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/bd7694c2268601cb917150b73199a90ac7c8e6.debug debian/topp/usr/bin/SpectraSTSearchAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/03 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ClusterMassTraces debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/03/443028caefa9e227e71be73ff114353fe3e0ce.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/03/443028caefa9e227e71be73ff114353fe3e0ce.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/03/443028caefa9e227e71be73ff114353fe3e0ce.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ClusterMassTraces objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/03/443028caefa9e227e71be73ff114353fe3e0ce.debug debian/topp/usr/bin/ClusterMassTraces install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MetaProSIP debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/58/67713e159efdd8cda8e269896f9d5ed23ea36f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/58/67713e159efdd8cda8e269896f9d5ed23ea36f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/58/67713e159efdd8cda8e269896f9d5ed23ea36f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MetaProSIP objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/58/67713e159efdd8cda8e269896f9d5ed23ea36f.debug debian/topp/usr/bin/MetaProSIP install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/InternalCalibration debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/a0252240a87f66b8ff1bf569de8b1eb778bd06.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/a0252240a87f66b8ff1bf569de8b1eb778bd06.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/a0252240a87f66b8ff1bf569de8b1eb778bd06.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/InternalCalibration objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/a0252240a87f66b8ff1bf569de8b1eb778bd06.debug debian/topp/usr/bin/InternalCalibration install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f8 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RNAMassCalculator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f8/4c18a91c22f49e8b58de355df8ea6e0cde7143.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f8/4c18a91c22f49e8b58de355df8ea6e0cde7143.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f8/4c18a91c22f49e8b58de355df8ea6e0cde7143.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RNAMassCalculator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f8/4c18a91c22f49e8b58de355df8ea6e0cde7143.debug debian/topp/usr/bin/RNAMassCalculator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/91 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileInfo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/91/2117a7ef3e3d016817004e8d2a94f48b73ebbc.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/91/2117a7ef3e3d016817004e8d2a94f48b73ebbc.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/91/2117a7ef3e3d016817004e8d2a94f48b73ebbc.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FileInfo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/91/2117a7ef3e3d016817004e8d2a94f48b73ebbc.debug debian/topp/usr/bin/FileInfo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/94 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/InspectAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/94/1c28591796f6da42b17dded95c0abfaa3846d2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/94/1c28591796f6da42b17dded95c0abfaa3846d2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/94/1c28591796f6da42b17dded95c0abfaa3846d2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/InspectAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/94/1c28591796f6da42b17dded95c0abfaa3846d2.debug debian/topp/usr/bin/InspectAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/Digestor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/5a98f4b80feb8d4fa452b388fef457eeedff5f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/5a98f4b80feb8d4fa452b388fef457eeedff5f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/5a98f4b80feb8d4fa452b388fef457eeedff5f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/Digestor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/5a98f4b80feb8d4fa452b388fef457eeedff5f.debug debian/topp/usr/bin/Digestor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RNPxlSearch debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/6bea787cd439c12eca5e87a6bb9fe4ce473694.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/6bea787cd439c12eca5e87a6bb9fe4ce473694.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/6bea787cd439c12eca5e87a6bb9fe4ce473694.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RNPxlSearch objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/6bea787cd439c12eca5e87a6bb9fe4ce473694.debug debian/topp/usr/bin/RNPxlSearch install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteinResolver debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/6b469d52d2e9e73e2f3ab1811999473550a4c3.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/6b469d52d2e9e73e2f3ab1811999473550a4c3.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/6b469d52d2e9e73e2f3ab1811999473550a4c3.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ProteinResolver objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/6b469d52d2e9e73e2f3ab1811999473550a4c3.debug debian/topp/usr/bin/ProteinResolver install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteomicsLFQ debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/1ed071c906b1bb6174360f990b128ef975cd2d.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/1ed071c906b1bb6174360f990b128ef975cd2d.debug chown 0:0 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/aa/0bdf8723c60391fbd32b40973ea07fa0894cb3.debug debian/topp/usr/bin/IDConflictResolver install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SequenceCoverageCalculator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/debdace4fdc1ce283ff40ec71ac1d89d766a64.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/debdace4fdc1ce283ff40ec71ac1d89d766a64.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/debdace4fdc1ce283ff40ec71ac1d89d766a64.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SequenceCoverageCalculator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/debdace4fdc1ce283ff40ec71ac1d89d766a64.debug debian/topp/usr/bin/SequenceCoverageCalculator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MascotAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/88473fb60c9398d89a0b77ecaa97028141e6f8.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/88473fb60c9398d89a0b77ecaa97028141e6f8.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/88473fb60c9398d89a0b77ecaa97028141e6f8.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MascotAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/88473fb60c9398d89a0b77ecaa97028141e6f8.debug debian/topp/usr/bin/MascotAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/InclusionExclusionListCreator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2e/9ee4bc4d36ac7867bfc7457b3b23ed8baccbfa.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2e/9ee4bc4d36ac7867bfc7457b3b23ed8baccbfa.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2e/9ee4bc4d36ac7867bfc7457b3b23ed8baccbfa.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/InclusionExclusionListCreator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2e/9ee4bc4d36ac7867bfc7457b3b23ed8baccbfa.debug debian/topp/usr/bin/InclusionExclusionListCreator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathConfidenceScoring debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2/b41f60d4137eb1f7b1e7a495353e144b6f6b38.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2/b41f60d4137eb1f7b1e7a495353e144b6f6b38.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2/b41f60d4137eb1f7b1e7a495353e144b6f6b38.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathConfidenceScoring objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2/b41f60d4137eb1f7b1e7a495353e144b6f6b38.debug debian/topp/usr/bin/OpenSwathConfidenceScoring install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b0 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathFileSplitter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b0/344a2e6015824aa4035f456e9a2b8178a8f0e7.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b0/344a2e6015824aa4035f456e9a2b8178a8f0e7.debug chown 0:0 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/b7153b5c121bdc3ff0756111a13b204ebfce37.debug debian/topp/usr/bin/IDSplitter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/db objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterBernNorm debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/db/5c57bfeac00e88aea117a77ac41e178f1837f0.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/db/5c57bfeac00e88aea117a77ac41e178f1837f0.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/db/5c57bfeac00e88aea117a77ac41e178f1837f0.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterBernNorm objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/db/5c57bfeac00e88aea117a77ac41e178f1837f0.debug debian/topp/usr/bin/SpectraFilterBernNorm install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/44/40a6fbfef83d1a821bf77c4d39e33c8f43cc72.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/44/40a6fbfef83d1a821bf77c4d39e33c8f43cc72.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/44/40a6fbfef83d1a821bf77c4d39e33c8f43cc72.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/44/40a6fbfef83d1a821bf77c4d39e33c8f43cc72.debug debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PeptideIndexer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7c/b9f27eca9ed608737c5ca1ea60bbfccc638a40.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7c/b9f27eca9ed608737c5ca1ea60bbfccc638a40.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7c/b9f27eca9ed608737c5ca1ea60bbfccc638a40.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PeptideIndexer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7c/b9f27eca9ed608737c5ca1ea60bbfccc638a40.debug debian/topp/usr/bin/PeptideIndexer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/CruxAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d2/1e64fd9cb354fa7d7f090b1762bd768946e883.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d2/1e64fd9cb354fa7d7f090b1762bd768946e883.debug 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objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a2/1de7c5ccd97c65de1402ee130b41d62b29c844.debug debian/topp/usr/bin/SpectraFilterMarkerMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fb objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerUnlabeledQT debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fb/09ffc0243c09adebc6507bf8d2b09b49e5bd3f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fb/09ffc0243c09adebc6507bf8d2b09b49e5bd3f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fb/09ffc0243c09adebc6507bf8d2b09b49e5bd3f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureLinkerUnlabeledQT objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fb/09ffc0243c09adebc6507bf8d2b09b49e5bd3f.debug debian/topp/usr/bin/FeatureLinkerUnlabeledQT install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PhosphoScoring debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70/39f4661cddbaa220b377a7eeae5826d00cb9c1.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70/39f4661cddbaa220b377a7eeae5826d00cb9c1.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70/39f4661cddbaa220b377a7eeae5826d00cb9c1.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PhosphoScoring objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/70/39f4661cddbaa220b377a7eeae5826d00cb9c1.debug debian/topp/usr/bin/PhosphoScoring install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8d objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/LabeledEval debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8d/952103ea6abf94256f5d84931231aabcccc38c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8d/952103ea6abf94256f5d84931231aabcccc38c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8d/952103ea6abf94256f5d84931231aabcccc38c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/LabeledEval objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8d/952103ea6abf94256f5d84931231aabcccc38c.debug debian/topp/usr/bin/LabeledEval install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/INIUpdater debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/c1aaae23f600bee0e3032537b6a0320b8218bc.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/c1aaae23f600bee0e3032537b6a0320b8218bc.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/c1aaae23f600bee0e3032537b6a0320b8218bc.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/INIUpdater objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/c1aaae23f600bee0e3032537b6a0320b8218bc.debug debian/topp/usr/bin/INIUpdater install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2d objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathDIAPreScoring debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2d/7436318694a0a736fcf7981cfa7634361e8b37.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2d/7436318694a0a736fcf7981cfa7634361e8b37.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2d/7436318694a0a736fcf7981cfa7634361e8b37.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathDIAPreScoring objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2d/7436318694a0a736fcf7981cfa7634361e8b37.debug debian/topp/usr/bin/OpenSwathDIAPreScoring install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MzMLSplitter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/7604d52d45a83962ebdb37501427b7b7d7c05c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/7604d52d45a83962ebdb37501427b7b7d7c05c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/7604d52d45a83962ebdb37501427b7b7d7c05c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MzMLSplitter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/7604d52d45a83962ebdb37501427b7b7d7c05c.debug debian/topp/usr/bin/MzMLSplitter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/92 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MultiplexResolver debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/92/d81ce172aae5f680907590b8c361068383eb14.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/92/d81ce172aae5f680907590b8c361068383eb14.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/92/d81ce172aae5f680907590b8c361068383eb14.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MultiplexResolver objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/92/d81ce172aae5f680907590b8c361068383eb14.debug debian/topp/usr/bin/MultiplexResolver install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/topp/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/topp/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/topp/usr/lib/debug install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/share/doc ln -s topp debian/.debhelper/topp/dbgsym-root/usr/share/doc/topp-dbgsym install -m0755 -d debian/.debhelper/topp chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/1f/6b63ecd907de26af4891e35bb6f99e399a47c2.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/1f/6b63ecd907de26af4891e35bb6f99e399a47c2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/1f/6b63ecd907de26af4891e35bb6f99e399a47c2.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ef objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ef/91b6e5d48d3e8e7c425a29d718ecd28f303a17.debug chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ef/91b6e5d48d3e8e7c425a29d718ecd28f303a17.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ef/91b6e5d48d3e8e7c425a29d718ecd28f303a17.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ef/91b6e5d48d3e8e7c425a29d718ecd28f303a17.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/c9 objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/c9/c1edc525e314a9a0c4a6a6aef348965b44230c.debug chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/c9/c1edc525e314a9a0c4a6a6aef348965b44230c.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/c9/c1edc525e314a9a0c4a6a6aef348965b44230c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/c9/c1edc525e314a9a0c4a6a6aef348965b44230c.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/libopenms2.6.0/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/libopenms2.6.0/usr/lib/debug install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/share/doc ln -s libopenms2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/share/doc/libopenms2.6.0-dbgsym install -m0755 -d debian/.debhelper/libopenms2.6.0 dh_makeshlibs -O--buildsystem=cmake -O--no-parallel rm -f debian/libopenms2.6.0/DEBIAN/shlibs install -m0755 -d debian/libopenms2.6.0/DEBIAN echo "libOpenMS 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs echo "libOpenMS_GUI 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs echo "libOpenSwathAlgo 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs echo "libSuperHirn 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs chmod 0644 -- debian/libopenms2.6.0/DEBIAN/shlibs chown 0:0 -- debian/libopenms2.6.0/DEBIAN/shlibs mv debian/.debhelper/generated/libopenms2.6.0/triggers.new debian/.debhelper/generated/libopenms2.6.0/triggers rm -f debian/libopenms-dev/DEBIAN/shlibs rm -f debian/topp/DEBIAN/shlibs rm -f debian/openms-common/DEBIAN/shlibs rm -f debian/openms-doc/DEBIAN/shlibs rm -f debian/openms/DEBIAN/shlibs dh_shlibdeps -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN dpkg-shlibdeps -Tdebian/libopenms2.6.0.substvars debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 install -m0755 -d debian/topp/DEBIAN dpkg-shlibdeps -Tdebian/topp.substvars debian/topp/usr/bin/MRMTransitionGroupPicker debian/topp/usr/bin/OpenSwathRewriteToFeatureXML debian/topp/usr/bin/QCMerger debian/topp/usr/bin/StaticModification debian/topp/usr/bin/TOPPAS debian/topp/usr/bin/TransformationEvaluation debian/topp/usr/bin/Decharger debian/topp/usr/bin/MSstatsConverter debian/topp/usr/bin/SpectraFilterNLargest debian/topp/usr/bin/ERPairFinder debian/topp/usr/bin/PrecursorIonSelector debian/topp/usr/bin/ExecutePipeline debian/topp/usr/bin/QCExporter debian/topp/usr/bin/IDFilter debian/topp/usr/bin/MapRTTransformer debian/topp/usr/bin/Epifany debian/topp/usr/bin/RTPredict debian/topp/usr/bin/MascotAdapterOnline debian/topp/usr/bin/FuzzyDiff debian/topp/usr/bin/NovorAdapter debian/topp/usr/bin/FidoAdapter debian/topp/usr/bin/GNPSExport debian/topp/usr/bin/SemanticValidator debian/topp/usr/bin/RTModel debian/topp/usr/bin/XFDR debian/topp/usr/bin/ConsensusID debian/topp/usr/bin/PepNovoAdapter debian/topp/usr/bin/OpenPepXLLF debian/topp/usr/bin/OpenSwathRTNormalizer debian/topp/usr/bin/ImageCreator debian/topp/usr/bin/QCEmbedder debian/topp/usr/bin/MapAlignerPoseClustering debian/topp/usr/bin/PercolatorAdapter debian/topp/usr/bin/DeMeanderize debian/topp/usr/bin/MapNormalizer debian/topp/usr/bin/OpenSwathFeatureXMLToTSV debian/topp/usr/bin/MSSimulator debian/topp/usr/bin/AccurateMassSearch debian/topp/usr/bin/FeatureFinderMetabo debian/topp/usr/bin/ClusterMassTracesByPrecursor debian/topp/usr/bin/MassTraceExtractor debian/topp/usr/bin/QCExtractor debian/topp/usr/bin/QCShrinker debian/topp/usr/bin/FeatureFinderSuperHirn debian/topp/usr/bin/NoiseFilterGaussian debian/topp/usr/bin/FeatureFinderIsotopeWavelet debian/topp/usr/bin/MSFraggerAdapter debian/topp/usr/bin/CometAdapter debian/topp/usr/bin/OpenSwathWorkflow debian/topp/usr/bin/HighResPrecursorMassCorrector debian/topp/usr/bin/FeatureFinderMetaboIdent debian/topp/usr/bin/FileMerger debian/topp/usr/bin/PTPredict debian/topp/usr/bin/FalseDiscoveryRate debian/topp/usr/bin/SpectraFilterSqrtMower debian/topp/usr/bin/FeatureFinderMRM debian/topp/usr/bin/MyriMatchAdapter debian/topp/usr/bin/IDScoreSwitcher debian/topp/usr/bin/XMLValidator debian/topp/usr/bin/FeatureFinderCentroided debian/topp/usr/bin/CompNovoCID debian/topp/usr/bin/ProteinInference debian/topp/usr/bin/TOFCalibration debian/topp/usr/bin/TextExporter debian/topp/usr/bin/QCImporter debian/topp/usr/bin/TICCalculator debian/topp/usr/bin/FeatureLinkerUnlabeled debian/topp/usr/bin/PeakPickerIterative debian/topp/usr/bin/EICExtractor debian/topp/usr/bin/FeatureFinderIdentification debian/topp/usr/bin/ExternalCalibration debian/topp/usr/bin/PTModel debian/topp/usr/bin/SeedListGenerator debian/topp/usr/bin/IDRipper debian/topp/usr/bin/OpenSwathChromatogramExtractor debian/topp/usr/bin/IDFileConverter debian/topp/usr/bin/IDMassAccuracy debian/topp/usr/bin/DTAExtractor debian/topp/usr/bin/MapStatistics debian/topp/usr/bin/SimpleSearchEngine debian/topp/usr/bin/MetaboliteAdductDecharger debian/topp/usr/bin/OpenSwathAnalyzer debian/topp/usr/bin/OpenSwathMzMLFileCacher debian/topp/usr/bin/QCCalculator debian/topp/usr/bin/OpenPepXL debian/topp/usr/bin/FeatureLinkerLabeled debian/topp/usr/bin/OpenMSInfo debian/topp/usr/bin/IDMapper debian/topp/usr/bin/LuciphorAdapter debian/topp/usr/bin/TargetedFileConverter debian/topp/usr/bin/BaselineFilter debian/topp/usr/bin/SwathWizard debian/topp/usr/bin/IDExtractor debian/topp/usr/bin/SpectraMerger debian/topp/usr/bin/OpenSwathAssayGenerator debian/topp/usr/bin/RTEvaluation debian/topp/usr/bin/SpecLibSearcher debian/topp/usr/bin/MapAlignerTreeGuided debian/topp/usr/bin/MRMMapper debian/topp/usr/bin/MetaboliteSpectralMatcher debian/topp/usr/bin/MapAlignerSpectrum debian/topp/usr/bin/PeakPickerWavelet debian/topp/usr/bin/SpectraFilterThresholdMower debian/topp/usr/bin/MassCalculator debian/topp/usr/bin/FeatureFinderMultiplex debian/topp/usr/bin/NucleicAcidSearchEngine debian/topp/usr/bin/DatabaseSuitability debian/topp/usr/bin/CVInspector debian/topp/usr/bin/OMSSAAdapter debian/topp/usr/bin/QualityControl debian/topp/usr/bin/FeatureLinkerUnlabeledKD debian/topp/usr/bin/SpecLibCreator debian/topp/usr/bin/ProteinQuantifier debian/topp/usr/bin/OpenSwathDecoyGenerator debian/topp/usr/bin/Resampler debian/topp/usr/bin/NoiseFilterSGolay debian/topp/usr/bin/SpectraFilterNormalizer debian/topp/usr/bin/SpectraFilterScaler debian/topp/usr/bin/PSMFeatureExtractor debian/topp/usr/bin/SpectraFilterWindowMower debian/topp/usr/bin/MzTabExporter debian/topp/usr/bin/SpectraFilterParentPeakMower debian/topp/usr/bin/DecoyDatabase debian/topp/usr/bin/INIFileEditor debian/topp/usr/bin/FFEval debian/topp/usr/bin/RNPxlXICFilter debian/topp/usr/bin/DatabaseFilter debian/topp/usr/bin/TOPPView debian/topp/usr/bin/PrecursorMassCorrector debian/topp/usr/bin/IDRTCalibration debian/topp/usr/bin/GenericWrapper debian/topp/usr/bin/XTandemAdapter debian/topp/usr/bin/MRMPairFinder debian/topp/usr/bin/MSGFPlusAdapter debian/topp/usr/bin/FileFilter debian/topp/usr/bin/ConsensusMapNormalizer debian/topp/usr/bin/IDMerger debian/topp/usr/bin/SiriusAdapter debian/topp/usr/bin/CompNovo debian/topp/usr/bin/PeakPickerHiRes debian/topp/usr/bin/DigestorMotif debian/topp/usr/bin/AssayGeneratorMetabo debian/topp/usr/bin/IDPosteriorErrorProbability debian/topp/usr/bin/MapAlignerIdentification debian/topp/usr/bin/IDDecoyProbability debian/topp/usr/bin/MaRaClusterAdapter debian/topp/usr/bin/FileConverter debian/topp/usr/bin/IsobaricAnalyzer debian/topp/usr/bin/RNADigestor debian/topp/usr/bin/SpectraSTSearchAdapter debian/topp/usr/bin/ClusterMassTraces debian/topp/usr/bin/MetaProSIP debian/topp/usr/bin/InternalCalibration debian/topp/usr/bin/RNAMassCalculator debian/topp/usr/bin/FileInfo debian/topp/usr/bin/InspectAdapter debian/topp/usr/bin/Digestor debian/topp/usr/bin/RNPxlSearch debian/topp/usr/bin/ProteinResolver debian/topp/usr/bin/ProteomicsLFQ debian/topp/usr/bin/IDConflictResolver debian/topp/usr/bin/SequenceCoverageCalculator debian/topp/usr/bin/MascotAdapter debian/topp/usr/bin/InclusionExclusionListCreator debian/topp/usr/bin/OpenSwathConfidenceScoring debian/topp/usr/bin/OpenSwathFileSplitter debian/topp/usr/bin/IDSplitter debian/topp/usr/bin/SpectraFilterBernNorm debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/topp/usr/bin/PeptideIndexer debian/topp/usr/bin/CruxAdapter debian/topp/usr/bin/SpectraFilterMarkerMower debian/topp/usr/bin/FeatureLinkerUnlabeledQT debian/topp/usr/bin/PhosphoScoring debian/topp/usr/bin/LabeledEval debian/topp/usr/bin/INIUpdater debian/topp/usr/bin/OpenSwathDIAPreScoring debian/topp/usr/bin/MzMLSplitter debian/topp/usr/bin/MultiplexResolver dh_installdeb -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN install -p -m0644 debian/.debhelper/generated/libopenms2.6.0/triggers debian/libopenms2.6.0/DEBIAN/triggers install -m0755 -d debian/libopenms-dev/DEBIAN install -m0755 -d debian/topp/DEBIAN install -m0755 -d debian/openms-common/DEBIAN install -m0755 -d debian/openms-doc/DEBIAN install -m0755 -d debian/openms/DEBIAN dh_gencontrol -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/openms-common/DEBIAN echo misc:Depends= >> debian/openms-common.substvars echo misc:Pre-Depends= >> debian/openms-common.substvars dpkg-gencontrol -popenms-common -ldebian/changelog -Tdebian/openms-common.substvars -cdebian/control -Pdebian/openms-common install -m0755 -d debian/libopenms2.6.0/DEBIAN echo misc:Depends= >> debian/libopenms2.6.0.substvars echo misc:Pre-Depends= >> debian/libopenms2.6.0.substvars install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN dpkg-gencontrol -plibopenms2.6.0 -ldebian/changelog -Tdebian/libopenms2.6.0.substvars -cdebian/control -Pdebian/.debhelper/libopenms2.6.0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libopenms2.6.0-dbgsym "-DDepends=libopenms2.6.0 (= \${binary:Version})" "-DDescription=debug symbols for libopenms2.6.0" "-DBuild-Ids=1f6b63ecd907de26af4891e35bb6f99e399a47c2 c9c1edc525e314a9a0c4a6a6aef348965b44230c d438b139bea39599125cad844013957e978b191e ef91b6e5d48d3e8e7c425a29d718ecd28f303a17" -DSection=debug -UReplaces -UBreaks install -m0755 -d debian/openms/DEBIAN echo misc:Depends= >> debian/openms.substvars echo misc:Pre-Depends= >> debian/openms.substvars dpkg-gencontrol -popenms -ldebian/changelog -Tdebian/openms.substvars -cdebian/control -Pdebian/openms install -m0755 -d debian/openms-doc/DEBIAN echo misc:Depends= >> debian/openms-doc.substvars echo misc:Pre-Depends= >> debian/openms-doc.substvars dpkg-gencontrol -popenms-doc -ldebian/changelog -Tdebian/openms-doc.substvars -cdebian/control -Pdebian/openms-doc install -m0755 -d debian/libopenms-dev/DEBIAN echo misc:Depends= >> debian/libopenms-dev.substvars echo misc:Pre-Depends= >> debian/libopenms-dev.substvars dpkg-gencontrol -plibopenms-dev -ldebian/changelog -Tdebian/libopenms-dev.substvars -cdebian/control -Pdebian/libopenms-dev install -m0755 -d debian/topp/DEBIAN echo misc:Depends= >> debian/topp.substvars echo misc:Pre-Depends= >> debian/topp.substvars install -m0755 -d debian/.debhelper/topp/dbgsym-root/DEBIAN dpkg-gencontrol -ptopp -ldebian/changelog -Tdebian/topp.substvars -cdebian/control -Pdebian/.debhelper/topp/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=topp-dbgsym "-DDepends=topp (= \${binary:Version})" "-DDescription=debug symbols for topp" "-DBuild-Ids=03443028caefa9e227e71be73ff114353fe3e0ce 040ae804064a0778d514ddf5639b3e2a673aab18 041492170b525fb6265998d5ee5d8bee364dc8a6 046b986ea13f3adb8c8385f3b6e20512d7ae6b03 04ed6f689de1e93885abd246f5aa5b811924077a 074a5667e1ae034c367ca0605921f7073b2030a6 08234d7f4bcc73410603e94d7d1a124164ad218f 089097b28fb9060dfdb5dd29b85ffc6d9250477e 09a629703e757751a08ff91854eca9063cf89807 09c6250ea9d58cf7f3460792a819d781acf49e5f 0f2114ff2fe60112f87f29c607fed3e9cc0f7038 1282a63a9cf98c64b09d352d713c9899748e5391 13dda8dfb8415b6b4550a62ac76131c60eed52ee 1773f01183bcc86fc80ae24dc1d154b192981dbb 1a5f6be9d1f3803617d1f00eafc91373c27da178 1af6a8cafd7732f0eb170eaed234d0ad9b06c6db 1b05bd07e5364d658a865bddd5f5b014bc1ba815 1ccf7111e42cbccd1f669c4847e0950b90d160d0 1dee75a1dcddc24e012e7222502e4d0989d92236 1e6b469d52d2e9e73e2f3ab1811999473550a4c3 22f6996fdd5b2d5a6a5c57f54e38b0c4685fa267 2692ab077df31b53905ea6df49bd877c597e6f6b 2796fb39ec4e2bd10a384f531047e47a78eb113a 28251a5c9e5e1418803d244d9fc95c0669cd676c 28514b298c7e95d9a427b580db73d84fb2c93a49 2a2982391024e6750a47641024a82ad24ceb7cee 2a848aac99ec2c27a307e48e6365cd1838230bc9 2b4cf5873cd9db49e775ae3c3e5b6055d0430502 2c57d283b7269a9be23ef5c98b7cfd94f28dc658 2d7436318694a0a736fcf7981cfa7634361e8b37 2e9ee4bc4d36ac7867bfc7457b3b23ed8baccbfa 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6260c728db0acfe999b3e616ab6f61fc4439d94a 6276068cd6a25adfebd3d4fad65da16e6039c0e6 62e2942717039b606e706901e3dd906ca8bea9ac 63b157bb66f849190889034eb86a486a1ffff997 6a375b0632d3bd6238254a20499d40eb8f9a2079 6c6019edbe0da0040b0eedd5b2ded91702529691 6de488162a816a75490638e3c3c72cecbd0edc7b 6dec391edbdf98f654092e36b75dfc9786e8332f 7039f4661cddbaa220b377a7eeae5826d00cb9c1 703bb4ff41097865cdb4cbc6e958eb7d1d9bfedd 74a296f322aa510e9aaad0e5ca25bf863d1bd323 74dbc42f9277fd4efbebd96cc0aba9de1a689ab0 759690e8035729e63e6e23d0d41c09a8d915df5b 7863d8ecd2f35b6ca6dde19237a56cbdf908ffec 7933a4ce6d1a640f3292556340e5ae795e0f875d 793c5d1a463f63ef0869dad179c4c65f02c2e407 7c4391c52e5e220ab566cb232a4890b4ace286ec 7cb9f27eca9ed608737c5ca1ea60bbfccc638a40 7e0dd7a7445ca825a1e0aed75a853d743710bd9b 7edebdace4fdc1ce283ff40ec71ac1d89d766a64 820a264b8c694aaaa323690ee7bb61f3d3ff0a0b 821dcc507babdaf8848889ca5934e9d2eec0925d 83ccd5f44e38156142a442a913fe07e7d7fab153 845199748a5803ffa622c89427ed2bdda722b929 8454c1c182b24153585696532eb5b65d519d0d7c 84a0252240a87f66b8ff1bf569de8b1eb778bd06 85e34ac622dd41b61e9c21d0f3c422681ecd3704 8a5209b8a44a8d586b72789384eeae842bfabc12 8c02aad8de0a7e1ffabc11b9bc5cb6c64a897ad1 8d952103ea6abf94256f5d84931231aabcccc38c 8e393a216df103084c7f867f51186a32c2294aad 8e88473fb60c9398d89a0b77ecaa97028141e6f8 90020edce14d4f4da8dd39fc129ca8d743e01ccb 906bea787cd439c12eca5e87a6bb9fe4ce473694 9093885715341dc5878e6f4482caa421043fc5a0 90a3db9723155b7d731f69b74be8d5313711dbaa 912117a7ef3e3d016817004e8d2a94f48b73ebbc 924a2e95fbc43eff99209b3d15d2191363933f3b 92d81ce172aae5f680907590b8c361068383eb14 931c9f6f754630748a92ca5996b6e5e3dc5eab5a 941c28591796f6da42b17dded95c0abfaa3846d2 94accd23187f4a1f117c6be1788cd476c3797680 98864691962134f444c9a2caa6cc889b82209ca9 9b480a03cfcde1a44bac9d083273f1c8bcf70d68 9c657473527aae7082d098c31d77a83df5af91f4 9d1ed071c906b1bb6174360f990b128ef975cd2d a0c79db6405997502b55bf22d30efefdac9d8049 a0c94682f2b5f54282e17d90cd319d5dfa4bbfd5 a21de7c5ccd97c65de1402ee130b41d62b29c844 a2a9a2d7f6f184e5dcc38170f89b375e0deb0ee0 a2b41f60d4137eb1f7b1e7a495353e144b6f6b38 a4f6a7d9515e0b32ef5ff7baf67da8a565217bac a5849ac18f346ff6dadf366b395490ca856e44a3 a69814d829719868ea0949388e22564c9605f9c4 a7ce29a6c823952d6a7866b8f8af196275ba1e31 a88867fbbc06d2e7fad5af778d921d93d7038936 a8a5b1b61c3f5ba8499f1f9410ccb325ae87b408 aa0bdf8723c60391fbd32b40973ea07fa0894cb3 ab6984b2a4cc1af77a56d736f2698c20d346922a ace8766de27061e2b192bd522678a1bdb4bfc8f1 ad5c98cace6685d80485d647c8d5ab5a554acf8b ad98f476ae9a5d696a749f4a90bd66e00edeba2e ada34c8a0a3a5a443314ea02de101814686ce808 aea3f765e689a57741695cfcc86e54c2f66befe5 b0344a2e6015824aa4035f456e9a2b8178a8f0e7 b179528e2cfc467a0bca469bba3b3465a25b676f b37604d52d45a83962ebdb37501427b7b7d7c05c b425477197e3dc8f43c70b28be4c448f8b4e674f b5a7403cfa2936697d9e6ef3b9c80241bf0a8b8c b71be2f3781b78204cc9ecf75558b99760e96769 b79fb92e728532d613b14e8bbdb7d26747bd7a3b b9d572ba8a7029c05cb183810bdf5752799e0fe5 bb8dd36b415e318c42fcd15147e0ee43837124ae be8dd97d63695e7a670f8381b09d9e0d1b6fd31a c03c4d16c3247d246aff6a860469ebe9e8644fdf c1f01e3f1a4ab6d6dc78b6dfe998408e2db9cd88 c40a5cca33be252f4b44634e93ae4f238e0394d9 c4a9271d4e13e29ee982e3a47149878e3edf81f1 c4c1aaae23f600bee0e3032537b6a0320b8218bc c8de49dde98fae6fdfd7ef85a80c639f57091ff9 ca4240222caca717b56761ead0cb98f9953c4311 cd488315df2f385f5fc3341cdc7f5c16beb952fb ce5a98f4b80feb8d4fa452b388fef457eeedff5f cf9b68c875e34fb25b2858bf38154c1a75a65c88 d0a10a1cec3e42cd9815bc596549a7f157c63100 d0de40c7ad9baaddeeb30597279c406fc8de35d0 d21e64fd9cb354fa7d7f090b1762bd768946e883 d3be9c91166f939ab453fa5009b9ab9ed11bee86 d3d3d4c5eaaf4f3e869af6eae25c7b5dc69d4ead d4a2ee8428e265e4fc2b942d52ac64c590f69ad1 d4d141f59484f2f75218bc8137f4a331d0baba6a d594a63892f6d2fb52360bcccfb18e05141400ac d5bf29fe80ab59e03af9bcc3c8b019a5ea0b7517 d769d5addb9ed2a03dc7398ba56adfd6f91a7e31 d7daf69db7c88c1f72f99606e087346651371dd6 db5c57bfeac00e88aea117a77ac41e178f1837f0 dcce52f4232784557e3c061a0d58afca04850a30 dd799436e8a698fffc541fdb7173a4981664d8ec dde9ca20174b62508620d2dcf621e761f8f05267 de7372ee337fd71b4e2e16af495b5ca33452592f dfc9723309241d3c2bdbaeef21d2e1d018d78d59 e22d5306ebf5f0e26d3d8f1d6dbe505772ceeebd e2cf64ab0f5b41b29280fc0bc47ea0ef773e287c e41da90327a2c8b7cc3269ae2dda309df41b41df e51d98420bb35b83f190e92a66404dc65a261d4d e55e38a5947dde4dca63dfcd5423af318be48a93 e6a073c3d992bd230925c2bff1462a91969ef9cd e6ce918528d568aacc89f2c23ac44f9a08f7fcaf e6d50b0fc239b7ca37b56f2e4448d72577b6b794 e7ad225b65b39112891ae0e9b0c94e37fd472b36 e925e56d5d2c37abeaeaafe4bfdce4c951131fb4 ebec06b8d5e837c779f74ea8c5e46ffba62f8eff ec78111abb9575b9ba9a56b0feffff898d7d00b9 ee1e3bbe8ab5eeccdf4af7acd47b8b5cde197d91 ee991cd5d99451aa155760cd422c72beb59ef8c0 f103a41ef7d3b55b41e2c14544476e4c486f1700 f55a7f9d53d4c0d44cc2339f7a5af41441cd64e1 f76b7283385f2164d51f6b45a595639451542a69 f84c18a91c22f49e8b58de355df8ea6e0cde7143 f8845a114eedb972c209c8c7e6ba5b94829a4c71 fa10a14870b15396d331aef321dbc59e0aa6041f fb09ffc0243c09adebc6507bf8d2b09b49e5bd3f fd0b07c72adfe471e666d72c00b24eac6dae95aa fd6c4b7b0f56e9ee04ba626fb50537c71cc0e975" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibopenms2.6.0 -ldebian/changelog -Tdebian/libopenms2.6.0.substvars -cdebian/control -Pdebian/libopenms2.6.0 chmod 0644 -- debian/openms/DEBIAN/control chown 0:0 -- debian/openms/DEBIAN/control chmod 0644 -- debian/openms-common/DEBIAN/control chown 0:0 -- debian/openms-common/DEBIAN/control chmod 0644 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptopp -ldebian/changelog -Tdebian/topp.substvars -cdebian/control -Pdebian/topp chmod 0644 -- debian/libopenms-dev/DEBIAN/control chown 0:0 -- debian/libopenms-dev/DEBIAN/control chmod 0644 -- debian/libopenms2.6.0/DEBIAN/control chown 0:0 -- debian/libopenms2.6.0/DEBIAN/control chmod 0644 -- debian/openms-doc/DEBIAN/control chown 0:0 -- debian/openms-doc/DEBIAN/control chmod 0644 -- debian/topp/DEBIAN/control chown 0:0 -- debian/topp/DEBIAN/control dh_md5sums -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN install -m0755 -d debian/topp/DEBIAN install -m0755 -d debian/openms-common/DEBIAN install -m0755 -d debian/openms-doc/DEBIAN install -m0755 -d debian/openms/DEBIAN install -m0755 -d debian/libopenms-dev/DEBIAN cd debian/openms >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libopenms2.6.0 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/topp >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/openms-common >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/openms-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libopenms-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/openms/DEBIAN/md5sums chown 0:0 -- debian/openms/DEBIAN/md5sums chmod 0644 -- debian/topp/DEBIAN/md5sums chown 0:0 -- debian/topp/DEBIAN/md5sums install -m0755 -d debian/.debhelper/topp/dbgsym-root/DEBIAN cd debian/.debhelper/topp/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libopenms2.6.0/DEBIAN/md5sums chown 0:0 -- debian/libopenms2.6.0/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN cd debian/.debhelper/libopenms2.6.0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libopenms-dev/DEBIAN/md5sums chown 0:0 -- debian/libopenms-dev/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/openms-common/DEBIAN/md5sums chown 0:0 -- debian/openms-common/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/openms-doc/DEBIAN/md5sums chown 0:0 -- debian/openms-doc/DEBIAN/md5sums dh_builddeb -O--buildsystem=cmake -O--no-parallel dpkg-deb --build debian/libopenms2.6.0 .. dpkg-deb --root-owner-group --build debian/.debhelper/libopenms2.6.0/dbgsym-root .. dpkg-deb --build debian/libopenms-dev .. dpkg-deb --build debian/topp .. dpkg-deb --root-owner-group --build debian/.debhelper/topp/dbgsym-root .. dpkg-deb --build debian/openms-common .. dpkg-deb --build debian/openms-doc .. dpkg-deb --build debian/openms .. dpkg-deb: building package 'topp-dbgsym' in '../topp-dbgsym_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'libopenms-dev' in '../libopenms-dev_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'openms-common' in '../openms-common_2.6.0+cleaned1-4_all.deb'. dpkg-deb: building package 'topp' in '../topp_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'libopenms2.6.0' in '../libopenms2.6.0_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'openms-doc' in '../openms-doc_2.6.0+cleaned1-4_all.deb'. dpkg-deb: building package 'libopenms2.6.0-dbgsym' in '../libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'openms' in '../openms_2.6.0+cleaned1-4_all.deb'. dpkg-genbuildinfo --build=binary -O../openms_2.6.0+cleaned1-4_i386.buildinfo dpkg-genchanges --build=binary -O../openms_2.6.0+cleaned1-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/34780 and its subdirectories I: Current time: Fri May 16 08:44:10 -12 2025 I: pbuilder-time-stamp: 1747428250 Sat Apr 13 14:21:23 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos12-i386.debian.net. Sat Apr 13 14:21:23 UTC 2024 I: Preparing to do remote build '2' on ionos12-i386.debian.net. Sat Apr 13 18:28:58 UTC 2024 I: Deleting $TMPDIR on ionos12-i386.debian.net. Sat Apr 13 18:28:58 UTC 2024 I: openms_2.6.0+cleaned1-4_i386.changes: Format: 1.8 Date: Sat, 23 Dec 2023 15:20:41 +0100 Source: openms Binary: libopenms-dev libopenms2.6.0 libopenms2.6.0-dbgsym openms openms-common openms-doc topp topp-dbgsym Architecture: i386 all Version: 2.6.0+cleaned1-4 Distribution: unstable Urgency: medium Maintainer: The Debichem Group Changed-By: Anton Gladky Description: libopenms-dev - library for LC/MS data management and analysis - dev files libopenms2.6.0 - library for LC/MS data management and analysis - runtime openms - package for LC/MS data management and analysis openms-common - package for LC/MS data management and analysis - shared data openms-doc - package for LC/MS data management and analysis - documentation topp - set of programs implementing The OpenMS Proteomic Pipeline Changes: openms (2.6.0+cleaned1-4) unstable; urgency=medium . * Team upload. * Add missing include of Boost-headers. * Do not use versioned boost dev dependencies. Checksums-Sha1: 14d4ef3d892b1551549ea70aaabd1005ddf665db 880156 libopenms-dev_2.6.0+cleaned1-4_i386.deb d6e549ab0f2e332638a705965eb41104b8db8e08 215871980 libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_i386.deb d78da14089d6ad93bb9903a86097d7ad77e14b61 8656972 libopenms2.6.0_2.6.0+cleaned1-4_i386.deb 7054c495df2e336675bbc497a778c4b49c61314d 4291064 openms-common_2.6.0+cleaned1-4_all.deb 97aaf2514dfd06b9a2b7a2b47fa7c329b404a1d0 43028584 openms-doc_2.6.0+cleaned1-4_all.deb 647dd737498c33736b31eecad72f9ece82221ed7 53584 openms_2.6.0+cleaned1-4_all.deb a55e26128ed0c396fce7c7af22e1d40c10c4fc0e 18624 openms_2.6.0+cleaned1-4_i386.buildinfo f0274c7604ac23e20ac0f5ab87976a924e7ef593 82127992 topp-dbgsym_2.6.0+cleaned1-4_i386.deb d024db4cbb68a0bef1973e7f0928a293e2554494 3368248 topp_2.6.0+cleaned1-4_i386.deb Checksums-Sha256: 127f88cee2e49b91eaa1fb15f4d4c476f1c1e43b2825861dd3e15c735acc578f 880156 libopenms-dev_2.6.0+cleaned1-4_i386.deb 2882bfc667186b6c95e7d9ea7ebf81f5cb48b68cadd5d0b78254ec399827cad7 215871980 libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_i386.deb 8da88ee9e71aa969b038b14ddaf3d3031fc2e5b1480bfb6a7958d5ec632cbb04 8656972 libopenms2.6.0_2.6.0+cleaned1-4_i386.deb a8748327a0062b297dbecd5cd578b72bd2bccf97e72536a2bd403090abf3b72f 4291064 openms-common_2.6.0+cleaned1-4_all.deb d0d9a598a81b9a566801280a90dba01b9b4994d2a35d251b0dfe9faa2222c719 43028584 openms-doc_2.6.0+cleaned1-4_all.deb bdb178d9722cc54222301a483afb5e3e37a74191e6f3d61b84e0c97ed6c318c1 53584 openms_2.6.0+cleaned1-4_all.deb 63d56b31bc2303ea214d4c29af405b4d0c021f4efc2bc5706e8ad78933a15a3d 18624 openms_2.6.0+cleaned1-4_i386.buildinfo dc8bb19fa057160b83cd85ed55be09d195e3ad28500bfd813c66cdb049a63564 82127992 topp-dbgsym_2.6.0+cleaned1-4_i386.deb 508e30809e6284bf0834c4b7a6520cfe5121cdf008a23d5d0442bcdbe977fc51 3368248 topp_2.6.0+cleaned1-4_i386.deb Files: c75586aa12d895479c3476877d20329b 880156 libdevel optional libopenms-dev_2.6.0+cleaned1-4_i386.deb 71d735a1dccfc80d2a26d0085deab1ba 215871980 debug optional libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_i386.deb 2286688e348492f740c96af9062b08a8 8656972 libs optional libopenms2.6.0_2.6.0+cleaned1-4_i386.deb 7c8a3ea518c636cb086c11e6f4ad1033 4291064 science optional openms-common_2.6.0+cleaned1-4_all.deb 56d64a150b5faa115d30f574c52d007e 43028584 doc optional openms-doc_2.6.0+cleaned1-4_all.deb daf16ac3814bc02de25abd7824aef9a6 53584 science optional openms_2.6.0+cleaned1-4_all.deb a9aa6181fbba08217116edc5cc0f37b5 18624 science optional openms_2.6.0+cleaned1-4_i386.buildinfo 4414cfc1db5b3a2f478e6bfa00d23ee2 82127992 debug optional topp-dbgsym_2.6.0+cleaned1-4_i386.deb 7d924174aa2da0bfd3676d8a0bf3c695 3368248 science optional topp_2.6.0+cleaned1-4_i386.deb Sat Apr 13 18:29:00 UTC 2024 I: diffoscope 264 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_6-20019.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.mzQjfkqs/openms_2.6.0+cleaned1-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.mzQjfkqs/openms_2.6.0+cleaned1-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.mzQjfkqs/openms_2.6.0+cleaned1-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.mzQjfkqs/b1/openms_2.6.0+cleaned1-4_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.mzQjfkqs/b2/openms_2.6.0+cleaned1-4_i386.changes ## close_archive (total time: 0.001s) 0.000s 28 calls diffoscope.comparators.xz.XzContainer 0.000s 24 calls diffoscope.comparators.tar.TarContainer 0.000s 12 calls diffoscope.comparators.deb.DebContainer 0.000s 4 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 164.200s) 72.674s 303 calls readelf 35.755s 2 calls objcopy 28.527s 44 calls diff 21.604s 30 calls xz 4.680s 66 calls objdump 0.916s 11 calls strings 0.021s 4 calls cmp 0.020s 4 calls cmp (external) 0.003s 25 calls cmp (internal) ## compare_files (cumulative) (total time: 45627.347s) 7617.158s 1 call abc.DotChangesFile 7617.096s 2 calls abc.DebFile 7616.943s 4 calls abc.XzFile 7614.686s 2 calls abc.DebDataTarFile 7612.724s 1 call abc.ElfFile 7546.912s 3 calls diffoscope.comparators.elf.ElfCodeSection 1.630s 2 calls diffoscope.comparators.elf.ElfSection 0.127s 2 calls abc.TarFile 0.048s 2 calls abc.Md5sumsFile 0.022s 1 call abc.TextFile ## container_extract (total time: 25.071s) 21.605s 30 calls diffoscope.comparators.xz.XzContainer 1.722s 34 calls diffoscope.comparators.deb.DebContainer 1.704s 1806 calls diffoscope.comparators.deb.DebTarContainer 0.040s 32 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 0.356s) 0.356s 6 calls linediff ## has_same_content_as (total time: 0.027s) 0.014s 2 calls abc.DebDataTarFile 0.006s 4 calls abc.Md5sumsFile 0.003s 2 calls abc.TarFile 0.001s 7 calls abc.TextFile 0.001s 4 calls abc.XzFile 0.001s 4 calls diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.001s 2 calls abc.DebFile 0.000s 1 call abc.DotChangesFile 0.000s 1 call abc.ElfFile 0.000s 3 calls diffoscope.comparators.elf.ElfCodeSection 0.000s 2 calls diffoscope.comparators.elf.ElfSection ## main (total time: 7622.418s) 7622.308s 2 calls outputs 0.110s 1 call cleanup ## open_archive (total time: 0.001s) 0.000s 24 calls diffoscope.comparators.tar.TarContainer 0.000s 30 calls diffoscope.comparators.xz.XzContainer 0.000s 20 calls diffoscope.comparators.deb.DebContainer 0.000s 6 calls diffoscope.comparators.deb.DebTarContainer ## output (total time: 0.526s) 0.524s 1 call html 0.002s 1 call text 0.001s 1 call json ## recognizes (total time: 27.253s) 19.630s 1500 calls diffoscope.comparators.utils.archive.ArchiveMember 4.305s 12 calls diffoscope.comparators.binary.FilesystemFile 3.153s 2742 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.165s 540 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.258s) 0.258s 32 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 2h 7min 2.760s CPU time consumed: 2h 6min 14.878s Sat Apr 13 20:36:04 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Sat Apr 13 20:36:04 UTC 2024 E: openms failed to build reproducibly in trixie on i386. Sat Apr 13 20:36:07 UTC 2024 I: Submitting .buildinfo files to external archives: Sat Apr 13 20:36:07 UTC 2024 I: Submitting 20K b1/openms_2.6.0+cleaned1-4_i386.buildinfo.asc Sat Apr 13 20:36:08 UTC 2024 I: Submitting 20K b2/openms_2.6.0+cleaned1-4_i386.buildinfo.asc Sat Apr 13 20:36:10 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Apr 13 20:36:10 UTC 2024 I: Done submitting .buildinfo files. Sat Apr 13 20:36:10 UTC 2024 I: Removing signed openms_2.6.0+cleaned1-4_i386.buildinfo.asc files: removed './b1/openms_2.6.0+cleaned1-4_i386.buildinfo.asc' removed './b2/openms_2.6.0+cleaned1-4_i386.buildinfo.asc'