Wed Apr 24 04:45:49 UTC 2024 I: starting to build metabat/trixie/i386 on jenkins on '2024-04-24 04:45' Wed Apr 24 04:45:49 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_7/26026/console.log Wed Apr 24 04:45:49 UTC 2024 I: Downloading source for trixie/metabat=2.15-4 --2024-04-24 04:45:49-- http://deb.debian.org/debian/pool/main/m/metabat/metabat_2.15-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2192 (2.1K) [text/prs.lines.tag] Saving to: ‘metabat_2.15-4.dsc’ 0K .. 100% 308M=0s 2024-04-24 04:45:49 (308 MB/s) - ‘metabat_2.15-4.dsc’ saved [2192/2192] Wed Apr 24 04:45:49 UTC 2024 I: metabat_2.15-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: metabat Binary: metabat Architecture: any-amd64 any-i386 Version: 2.15-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://bitbucket.org/berkeleylab/metabat/wiki/Home Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/metabat Vcs-Git: https://salsa.debian.org/med-team/metabat.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, libboost-graph-dev, libboost-system-dev, libboost-filesystem-dev, libboost-serialization-dev, libboost-program-options-dev, libboost-iostreams-dev, zlib1g-dev, libhts-dev, pkg-config, python3 Package-List: metabat deb science optional arch=any-amd64,any-i386,x32 Checksums-Sha1: d486fcd81dd4c7dc135a31825feac05ed83e44ae 195575 metabat_2.15.orig.tar.gz 72d730daae558c134e5fa4177761b189c5de464c 9780 metabat_2.15-4.debian.tar.xz Checksums-Sha256: 550487b66ec9b3bc53edf513d00c9deda594a584f53802165f037bde29b4d34e 195575 metabat_2.15.orig.tar.gz 7521be6fe28c25b9b53cb210caa9fe9c3fce60a95d358d963516ca464ef6c2b2 9780 metabat_2.15-4.debian.tar.xz Files: 61a8f6a1334e5367c428505edeb4305a 195575 metabat_2.15.orig.tar.gz 33848016ee6f38831d1e4e976a157cc9 9780 metabat_2.15-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmM1xXwRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEghxAAg8xG+myf64yYREzYBSXVpjZAIZ6U56H6 kv6V7Q4zwXWzetddKWnkB+Cs8geLzZEMz9Ha3jkgiMowh1ggpCGRQ00gJ5UIlauJ 0JODA41e5mAb6yILR61T/VlPqohaAPF/CwlNVtCNthqr3sZZEYrSFPwQO7+dTUFq EX8Sz/DPHr7SnrAya9ta6YE5Y+6nv6oSo6pjGZtCVOmXD+tWT41phM/DlyFOYz0z oK/cBZLZWwHHKReWwW3DRnmOgtRyZ765ERWwW/r2IhCm9RQy4uuOD6t4aa1ZOnJb ym93QMkGboJT1j+F+iYi4LAMxx4Ej3UMWONqA4skawMONre2Rd7dB8XSc9VPkKQa Ro0nfo+JCAZPBPEaQYbHLmMsyb5QgU7J8uO8jZelljsxJ6BAbHPRCXH644DbyxOX XqaeBONYhONN6JbcO/+KLl33rppDaIsCvKCvTsAcG7jEqGa5RAXYMR/EaKUt0tBX UVwwffII8p7J6w91RnHU3T0UBC70rxIcFrbCUHBijDsSWrve0YVA/M2ZapGsBGqW /iCymSatNYfEAxFHbolPvDaSFtC3u5xJUBWlYEOFPZSXA+9OkvJ9H+jBOS8OBFuI AQtkMKgZc+mIdjaGk92SNaEsHEYZynkljGv1a8tA+KtkLmei6AddT8B62J4PUq2/ le5zlYfXpoU= =xFLg -----END PGP SIGNATURE----- Wed Apr 24 04:45:49 UTC 2024 I: Checking whether the package is not for us Wed Apr 24 04:45:49 UTC 2024 I: Starting 1st build on remote node ionos12-i386.debian.net. Wed Apr 24 04:45:49 UTC 2024 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Wed Apr 24 04:48:00 UTC 2024 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Apr 23 16:45:53 -12 2024 I: pbuilder-time-stamp: 1713933953 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [metabat_2.15-4.dsc] I: copying [./metabat_2.15.orig.tar.gz] I: copying [./metabat_2.15-4.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Sep 29 16:19:08 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./metabat_2.15-4.dsc: no acceptable signature found dpkg-source: info: extracting metabat in metabat-2.15 dpkg-source: info: unpacking metabat_2.15.orig.tar.gz dpkg-source: info: unpacking metabat_2.15-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libs.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/11826/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='4748f20828db43e6a44e95696279e559' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='11826' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.l9kPqdeh/pbuilderrc_Jbio --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.l9kPqdeh/b1 --logfile b1/build.log metabat_2.15-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos12-i386 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 21 07:12 /bin -> usr/bin I: user script /srv/workspace/pbuilder/11826/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libboost-graph-dev, libboost-system-dev, libboost-filesystem-dev, libboost-serialization-dev, libboost-program-options-dev, libboost-iostreams-dev, zlib1g-dev, libhts-dev, pkg-config, python3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19876 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libboost-graph-dev; however: Package libboost-graph-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-system-dev; however: Package libboost-system-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libhts-dev; however: Package libhts-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-graph-dev{a} libboost-graph1.83-dev{a} libboost-graph1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-test1.83-dev{a} libboost-test1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libcurl3-gnutls{a} libcurl4{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libhts-dev{a} libhts3{a} libhtscodecs2{a} libicu-dev{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-minimal{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 99 newly installed, 0 to remove and 0 not upgraded. Need to get 74.1 MB of archives. After unpacking 426 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libpython3.11-minimal i386 3.11.8-1 [817 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.2-1 [107 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 python3.11-minimal i386 3.11.8-1 [2087 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.11.6-1 [26.2 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 tzdata all 2024a-1 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-3 [69.1 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libreadline8 i386 8.2-3+b1 [171 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libpython3.11-stdlib i386 3.11.8-1 [1821 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 python3.11 i386 3.11.8-1 [597 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.11.6-1 [9224 B] Get: 13 http://deb.debian.org/debian trixie/main i386 python3 i386 3.11.6-1 [26.2 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-4 [65.4 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-4 [876 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-2+b1 [314 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libmagic1 i386 1:5.45-2+b1 [114 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-2+b1 [43.0 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-3 [1195 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.39.3-6 [93.3 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 man-db i386 2.12.0-3 [1413 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 autoconf all 2.71-3 [332 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 autopoint all 0.21-14 [496 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b2 [727 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libarchive13 i386 3.7.2-1 [386 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-4+b1 [20.7 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-4+b1 [60.7 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5+b3 [196 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.59.0-1 [82.5 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libpsl5 i386 0.21.2-1+b1 [59.7 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libssh2-1 i386 1.11.0-4 [224 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libcurl4 i386 8.5.0-2 [463 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libjsoncpp25 i386 1.9.5-6+b2 [89.2 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 librhash0 i386 1.4.3-3+b1 [143 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libuv1 i386 1.48.0-1 [156 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 cmake-data all 3.28.3-1 [2128 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 cmake i386 3.28.3-1 [11.7 MB] Get: 48 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 55 http://deb.debian.org/debian trixie/main i386 libelf1 i386 0.190-1+b1 [182 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1 [118 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 debhelper all 13.15.3 [901 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 icu-devtools i386 72.1-4+b1 [216 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 libboost1.83-dev i386 1.83.0-2+b2 [10.6 MB] Get: 63 http://deb.debian.org/debian trixie/main i386 libboost-atomic1.83.0 i386 1.83.0-2+b2 [234 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libboost-atomic1.83-dev i386 1.83.0-2+b2 [235 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 libboost-filesystem1.83.0 i386 1.83.0-2+b2 [287 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 libboost-system1.83.0 i386 1.83.0-2+b2 [230 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 libboost-system1.83-dev i386 1.83.0-2+b2 [231 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 libboost-filesystem1.83-dev i386 1.83.0-2+b2 [302 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 libboost-filesystem-dev i386 1.83.0.2+b2 [3640 B] Get: 70 http://deb.debian.org/debian trixie/main i386 libboost-graph1.83.0 i386 1.83.0-2+b2 [366 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83.0 i386 1.83.0-2+b2 [328 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 libicu-dev i386 72.1-4+b1 [10.6 MB] Get: 73 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83-dev i386 1.83.0-2+b2 [347 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83.0 i386 1.83.0-2+b2 [341 kB] Get: 75 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83-dev i386 1.83.0-2+b2 [383 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 libboost-test1.83.0 i386 1.83.0-2+b2 [479 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 libboost-test1.83-dev i386 1.83.0-2+b2 [553 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 libboost-graph1.83-dev i386 1.83.0-2+b2 [392 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 libboost-graph-dev i386 1.83.0.2+b2 [3708 B] Get: 80 http://deb.debian.org/debian trixie/main i386 libboost-iostreams1.83-dev i386 1.83.0-2+b2 [264 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 libboost-iostreams-dev i386 1.83.0.2+b2 [3588 B] Get: 82 http://deb.debian.org/debian trixie/main i386 libboost-program-options1.83.0 i386 1.83.0-2+b2 [358 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 libboost-program-options1.83-dev i386 1.83.0-2+b2 [388 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 libboost-program-options-dev i386 1.83.0.2+b2 [3616 B] Get: 85 http://deb.debian.org/debian trixie/main i386 libboost-serialization-dev i386 1.83.0.2+b2 [3832 B] Get: 86 http://deb.debian.org/debian trixie/main i386 libboost-system-dev i386 1.83.0.2+b2 [3740 B] Get: 87 http://deb.debian.org/debian trixie/main i386 libcurl3-gnutls i386 8.5.0-2 [454 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 libcurl4-gnutls-dev i386 8.5.0-2 [574 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 libdeflate-dev i386 1.20-1 [56.0 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 libhtscodecs2 i386 1.6.0-1+b1 [68.5 kB] Get: 92 http://deb.debian.org/debian trixie/main i386 libhts3 i386 1.19+ds-1 [490 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 liblzma-dev i386 5.6.1+really5.4.5-1 [304 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg-3+b1 [915 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 libhts-dev i386 1.19+ds-1 [1660 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 libpkgconf3 i386 1.8.1-1+b2 [38.5 kB] Get: 97 http://deb.debian.org/debian trixie/main i386 pkgconf-bin i386 1.8.1-1+b2 [30.2 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 pkgconf i386 1.8.1-1+b2 [26.2 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 pkg-config i386 1.8.1-1+b2 [14.0 kB] Fetched 74.1 MB in 1s (57.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:i386. 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Unpacking pkg-config:i386 (1.8.1-1+b2) ... Setting up libhtscodecs2:i386 (1.6.0-1+b1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:i386 (1.5.7-2) ... Setting up libboost-program-options1.83.0:i386 (1.83.0-2+b2) ... Setting up libboost1.83-dev:i386 (1.83.0-2+b2) ... Setting up libpsl5:i386 (0.21.2-1+b1) ... Setting up libicu72:i386 (72.1-4+b1) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libmagic-mgc (1:5.45-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libboost-regex1.83.0:i386 (1.83.0-2+b2) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:i386 (1.1.0-2+b3) ... Setting up libboost-system1.83.0:i386 (1.83.0-2+b2) ... Setting up libboost-program-options1.83-dev:i386 (1.83.0-2+b2) ... Setting up libnghttp2-14:i386 (1.59.0-1) ... Setting up libmagic1:i386 (1:5.45-2+b1) ... Setting up libdeflate0:i386 (1.20-1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2+b1) ... 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Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/metabat-2.15/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../metabat_2.15-4_source.changes dpkg-buildpackage: info: source package metabat dpkg-buildpackage: info: source version 2.15-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu .. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Installing None MetaBAT into /usr -- Found ZLIB: /usr/lib/i386-linux-gnu/libz.so (found version "1.3") -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for module 'htslib' -- Found htslib, version 1.19 -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.55.0") found components: program_options filesystem system graph serialization iostreams regex -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") Using OpenMP Boost cmake dir: Boost include: /usr/include Boost libraries:/usr/lib/i386-linux-gnu/libboost_program_options.a/usr/lib/i386-linux-gnu/libboost_filesystem.a/usr/lib/i386-linux-gnu/libboost_system.a/usr/lib/i386-linux-gnu/libboost_graph.a/usr/lib/i386-linux-gnu/libboost_serialization.a/usr/lib/i386-linux-gnu/libboost_iostreams.a/usr/lib/i386-linux-gnu/libboost_regex.a Boost lib ver:1_83 Boost lib dir:/usr/lib/i386-linux-gnu -- Configuring done (3.0s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu dh_auto_build cd obj-i686-linux-gnu && make -j11 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/metabat-2.15 -B/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make -f src/CMakeFiles/metabat1.dir/build.make src/CMakeFiles/metabat1.dir/depend make -f src/CMakeFiles/metabat2.dir/build.make src/CMakeFiles/metabat2.dir/depend make -f src/CMakeFiles/jgi_summarize_bam_contig_depths.dir/build.make src/CMakeFiles/jgi_summarize_bam_contig_depths.dir/depend make -f src/CMakeFiles/contigOverlaps.dir/build.make src/CMakeFiles/contigOverlaps.dir/depend make[3]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metabat-2.15 /build/reproducible-path/metabat-2.15/src /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src/CMakeFiles/metabat1.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metabat-2.15 /build/reproducible-path/metabat-2.15/src /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src/CMakeFiles/metabat2.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metabat-2.15 /build/reproducible-path/metabat-2.15/src /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src/CMakeFiles/jgi_summarize_bam_contig_depths.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/metabat-2.15 /build/reproducible-path/metabat-2.15/src /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src/CMakeFiles/contigOverlaps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make -f src/CMakeFiles/metabat1.dir/build.make src/CMakeFiles/metabat1.dir/build make[3]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make -f src/CMakeFiles/metabat2.dir/build.make src/CMakeFiles/metabat2.dir/build make -f src/CMakeFiles/jgi_summarize_bam_contig_depths.dir/build.make src/CMakeFiles/jgi_summarize_bam_contig_depths.dir/build make[3]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make -f src/CMakeFiles/contigOverlaps.dir/build.make src/CMakeFiles/contigOverlaps.dir/build make[3]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' [ 12%] Building CXX object src/CMakeFiles/metabat2.dir/metabat2.cpp.o [ 25%] Building CXX object src/CMakeFiles/jgi_summarize_bam_contig_depths.dir/jgi_summarize_bam_contig_depths.cpp.o [ 37%] Building CXX object src/CMakeFiles/metabat1.dir/metabat1.cpp.o cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src && /usr/bin/c++ -D_XOPEN_SOURCE=700 -I/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu -I/build/reproducible-path/metabat-2.15 -g -O2 -ffile-prefix-map=/build/reproducible-path/metabat-2.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -std=c++11 -MD -MT src/CMakeFiles/metabat2.dir/metabat2.cpp.o -MF CMakeFiles/metabat2.dir/metabat2.cpp.o.d -o CMakeFiles/metabat2.dir/metabat2.cpp.o -c /build/reproducible-path/metabat-2.15/src/metabat2.cpp cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src && /usr/bin/c++ -D_XOPEN_SOURCE=700 -I/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu -I/build/reproducible-path/metabat-2.15 -g -O2 -ffile-prefix-map=/build/reproducible-path/metabat-2.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -std=c++11 -MD -MT src/CMakeFiles/jgi_summarize_bam_contig_depths.dir/jgi_summarize_bam_contig_depths.cpp.o -MF CMakeFiles/jgi_summarize_bam_contig_depths.dir/jgi_summarize_bam_contig_depths.cpp.o.d -o CMakeFiles/jgi_summarize_bam_contig_depths.dir/jgi_summarize_bam_contig_depths.cpp.o -c /build/reproducible-path/metabat-2.15/src/jgi_summarize_bam_contig_depths.cpp cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src && /usr/bin/c++ -D_XOPEN_SOURCE=700 -I/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu -I/build/reproducible-path/metabat-2.15 -g -O2 -ffile-prefix-map=/build/reproducible-path/metabat-2.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -std=c++11 -MD -MT src/CMakeFiles/metabat1.dir/metabat1.cpp.o -MF CMakeFiles/metabat1.dir/metabat1.cpp.o.d -o CMakeFiles/metabat1.dir/metabat1.cpp.o -c /build/reproducible-path/metabat-2.15/src/metabat1.cpp [ 50%] Building CXX object src/CMakeFiles/contigOverlaps.dir/contigOverlaps.cpp.o cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src && /usr/bin/c++ -D_XOPEN_SOURCE=700 -I/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu -I/build/reproducible-path/metabat-2.15 -g -O2 -ffile-prefix-map=/build/reproducible-path/metabat-2.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -std=c++11 -MD -MT src/CMakeFiles/contigOverlaps.dir/contigOverlaps.cpp.o -MF CMakeFiles/contigOverlaps.dir/contigOverlaps.cpp.o.d -o CMakeFiles/contigOverlaps.dir/contigOverlaps.cpp.o -c /build/reproducible-path/metabat-2.15/src/contigOverlaps.cpp In file included from /usr/include/boost/math/policies/error_handling.hpp:11, from /usr/include/boost/math/distributions/detail/common_error_handling.hpp:12, from /usr/include/boost/math/distributions/arcsine.hpp:35, from /usr/include/boost/math/distributions.hpp:15, from /build/reproducible-path/metabat-2.15/src/metabat1.h:40, from /build/reproducible-path/metabat-2.15/src/metabat1.cpp:1: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ In file included from /usr/include/boost/math/policies/error_handling.hpp:11, from /usr/include/boost/math/distributions/detail/common_error_handling.hpp:12, from /usr/include/boost/math/distributions/arcsine.hpp:35, from /usr/include/boost/math/distributions.hpp:15, from /build/reproducible-path/metabat-2.15/src/metabat2.h:45, from /build/reproducible-path/metabat-2.15/src/metabat2.cpp:1: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ In file included from /build/reproducible-path/metabat-2.15/src/jgi_summarize_bam_contig_depths.h:35, from /build/reproducible-path/metabat-2.15/src/jgi_summarize_bam_contig_depths.cpp:5: /build/reproducible-path/metabat-2.15/src/BamUtils.h: In member function ‘bam1_t* BamCache::getBam(const bam1_t*)’: /build/reproducible-path/metabat-2.15/src/BamUtils.h:98:34: warning: ignoring return value of ‘bam1_t* bam_copy1(bam1_t*, const bam1_t*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 98 | bam_copy1(bam, copy); | ~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/metabat-2.15/src/BamUtils.h: In member function ‘NameBamMap::iterator NameBamMap::insert(std::string, const bam1_t*, bool)’: /build/reproducible-path/metabat-2.15/src/BamUtils.h:271:42: warning: ignoring return value of ‘bam1_t* bam_copy1(bam1_t*, const bam1_t*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 271 | bam_copy1(existing->second, bam); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/metabat-2.15/src/BamUtils.h: In static member function ‘static int BamUtils::_findPairInFile(const bam1_t*, void*)’: /build/reproducible-path/metabat-2.15/src/BamUtils.h:582:34: warning: ignoring return value of ‘bam1_t* bam_copy1(bam1_t*, const bam1_t*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 582 | bam_copy1(data->mate, orphan); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/metabat-2.15/src/metabat1.h:207:55: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 207 | template struct pair_equal_to: std::binary_function, bool> { | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/metabat-2.15/src/metabat1.h:4: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/metabat-2.15/src/metabat1.cpp: In function ‘void pam_loop(int, ContigVector&, std::vector&, ContigSet&, ClassMap&)’: /build/reproducible-path/metabat-2.15/src/metabat1.cpp:1463:85: warning: ‘std::binder1st<_Operation> std::bind1st(const _Operation&, const _Tp&) [with _Operation = pair_equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 1463 | medoid_vals[i] = std::find_if(rABD.begin(), rABD.end(), std::bind1st(pair_equal_to(),medoid_ids[i]))->second; | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438: /usr/include/c++/13/backward/binders.h:136:5: note: declared here 136 | bind1st(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ [ 62%] Linking CXX executable contigOverlaps cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/contigOverlaps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/metabat-2.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now CMakeFiles/contigOverlaps.dir/contigOverlaps.cpp.o -o contigOverlaps -lhts /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libboost_program_options.a /usr/lib/i386-linux-gnu/libboost_filesystem.a /usr/lib/i386-linux-gnu/libboost_system.a /usr/lib/i386-linux-gnu/libboost_graph.a /usr/lib/i386-linux-gnu/libboost_serialization.a /usr/lib/i386-linux-gnu/libboost_iostreams.a /usr/lib/i386-linux-gnu/libboost_regex.a make[3]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' [ 62%] Built target contigOverlaps [ 75%] Linking CXX executable jgi_summarize_bam_contig_depths cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/jgi_summarize_bam_contig_depths.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/metabat-2.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now CMakeFiles/jgi_summarize_bam_contig_depths.dir/jgi_summarize_bam_contig_depths.cpp.o -o jgi_summarize_bam_contig_depths -lhts /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libboost_program_options.a /usr/lib/i386-linux-gnu/libboost_filesystem.a /usr/lib/i386-linux-gnu/libboost_system.a /usr/lib/i386-linux-gnu/libboost_graph.a /usr/lib/i386-linux-gnu/libboost_serialization.a /usr/lib/i386-linux-gnu/libboost_iostreams.a /usr/lib/i386-linux-gnu/libboost_regex.a make[3]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' [ 75%] Built target jgi_summarize_bam_contig_depths [ 87%] Linking CXX executable metabat2 cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/metabat2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/metabat-2.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now CMakeFiles/metabat2.dir/metabat2.cpp.o -o metabat2 -lhts /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libboost_program_options.a /usr/lib/i386-linux-gnu/libboost_filesystem.a /usr/lib/i386-linux-gnu/libboost_system.a /usr/lib/i386-linux-gnu/libboost_graph.a /usr/lib/i386-linux-gnu/libboost_serialization.a /usr/lib/i386-linux-gnu/libboost_iostreams.a /usr/lib/i386-linux-gnu/libboost_regex.a make[3]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' [ 87%] Built target metabat2 [100%] Linking CXX executable metabat1 cd /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/metabat1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/metabat-2.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now CMakeFiles/metabat1.dir/metabat1.cpp.o -o metabat1 -lhts /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libboost_program_options.a /usr/lib/i386-linux-gnu/libboost_filesystem.a /usr/lib/i386-linux-gnu/libboost_system.a /usr/lib/i386-linux-gnu/libboost_graph.a /usr/lib/i386-linux-gnu/libboost_serialization.a /usr/lib/i386-linux-gnu/libboost_iostreams.a /usr/lib/i386-linux-gnu/libboost_regex.a make[3]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' [100%] Built target metabat1 make[2]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/metabat-2.15' cp -a test/contigs_depth.txt obj-i686-linux-gnu dh_auto_test cd obj-i686-linux-gnu && make -j11 test ARGS\+=--verbose ARGS\+=-j11 make[2]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j11 UpdateCTestConfiguration from :/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test_depths 1: Test command: /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src/jgi_summarize_bam_contig_depths "--referenceFasta" "/build/reproducible-path/metabat-2.15/test/contigs.fa" "--outputDepth" "/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_depth.txt" "/build/reproducible-path/metabat-2.15/test/contigs-1000.fastq.bam" 1: Working Directory: /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/test 1: Test timeout computed to be: 10000000 test 2 Start 2: test_metabat1 2: Test command: /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src/metabat1 "--inFile" "/build/reproducible-path/metabat-2.15/test/contigs.fa" "--abdFile" "/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_depth.txt" "--outFile" "/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_bins" "-v" 2: Working Directory: /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/test 2: Test timeout computed to be: 10000000 test 3 Start 3: test_metabat2 3: Test command: /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/src/metabat2 "--inFile" "/build/reproducible-path/metabat-2.15/test/contigs.fa" "--abdFile" "/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_depth.txt" "--outFile" "/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_bins" "-v" 3: Working Directory: /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/test 3: Test timeout computed to be: 10000000 2: MetaBAT 1 (nosha) using p1 90.0%, p2 90.0%, p3 95.0%, minProb 80.0%, minBinned 40%, minCV 1.0, minContig 2500, minContigByCorr 1000, minCorr 92%, paired 0, and 20 bootstrapping 3: MetaBAT 2 (nosha) using minContig 2500, minCV 1.0, minCVSum 1.0, maxP 95%, minS 60, maxEdges 200 and minClsSize 200000. with random seed=1713934052 3: [00:00:00] Executing with 13 threads 3: [00:00:00] Parsing abundance file 3: [00:00:00] Parsing assembly file 3: [00:00:00] Number of large contigs >= 2500 are 1. 3: [00:00:00] Reading abundance file 3: [00:00:00] Finished reading 1 contigs and 1 coverages from /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_depth.txt 3: [00:00:00] Number of target contigs: 1 of large (>= 2500) and 0 of small ones (>=1000 & <2500). 2: [00:00:00] Finished reading 1 contigs. Number of target contigs >= 2500 are 1, and [1000 and 2500) are 0 2: [00:00:00] Finished reading 1 contigs (using 1 including 0 short contigs) and 1 coverages from /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_depth.txt 2: [Info] Correlation binning won't be applied since the number of samples (1) < minSamples (10) 1: Reference fasta file /build/reproducible-path/metabat-2.15/test/contigs.fa 1: Output depth matrix to /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_depth.txt 1: jgi_summarize_bam_contig_depths nosha 1: Output matrix to /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_depth.txt 1: Reading reference fasta file: /build/reproducible-path/metabat-2.15/test/contigs.fa 1: ... 1 sequences 1: 0: Opening bam: /build/reproducible-path/metabat-2.15/test/contigs-1000.fastq.bam 2: [00:00:00] Finished TNF calculation. 3: [00:00:00] Start TNF calculation. nobs = 1 2: [00:00:00] Finished building a probabilistic graph. (1 vertices and 0 edges) 3: [00:00:00] Finished TNF calculation. 1: Processing bam files 1: Thread 0 finished: contigs-1000.fastq.bam with 1000 reads and 1000 readsWellMapped 1: Creating depth matrix file: /build/reproducible-path/metabat-2.15/obj-i686-linux-gnu/contigs_depth.txt 1: Closing most bam files 1: Closing last bam file 1: Finished 1/3 Test #1: test_depths ...................... Passed 0.21 sec 2: [00:00:00] Bootstrapping 1/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 2/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 3/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 4/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 5/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 6/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 7/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 8/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 9/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 10/20 [-31.8Gb / 7.7Gb] [00:00:00] Bootstrapping 11/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 12/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 13/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 14/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 15/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 16/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 17/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 18/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 19/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 20/20 [-31.8Gb / 7.7Gb] [00:00:01] Bootstrapping 20/20 [-31.8Gb / 7.7Gb] 2: [00:00:01] Saved bootstrap intermediate file (boot.514673552) for reuse in case of failure 2: [00:00:01] Building Ensemble Graph 0.0% (0 of 1), ETA -596523:-14:-8 [-31.8Gb / 7.7Gb] [00:00:01] Finished Ensemble Graph (1 vertices and 0 edges) [0.0Gb / 0.0Gb] 2: [00:00:01] Starting Ensemble Binning [-31.8Gb / 7.7Gb] 2: [00:00:01] Running Ensemble Binning [-31.8Gb / 7.7Gb] [00:00:01] Running Ensemble Binning 1 [-31.8Gb / 7.7Gb] [00:00:01] Running Ensemble Binning 1 [-31.8Gb / 7.7Gb] 2: [00:00:01] Finished Ensemble Binning [-31.8Gb / 7.7Gb] 2: [00:00:01] Cleaned up intermediate files 2: [00:00:01] 0.00% (0 out of 5404 bases) was binned. 2: Number of clusters formed: 0 2/3 Test #2: test_metabat1 .................... Passed 1.68 sec 3: [00:00:00] Preparing TNF Graph Building [pTNF = 99.9; 0 / 1 (P = 0.00%) round 1] [00:00:00] Preparing TNF Graph Building [pTNF = 99.7; 0 / 1 (P = 0.00%) round 2] [00:00:00] Preparing TNF Graph Building [pTNF = 99.6; 0 / 1 (P = 0.00%) round 3] [00:00:00] Preparing TNF Graph Building [pTNF = 99.5; 0 / 1 (P = 0.00%) round 4] [00:00:00] Preparing TNF Graph Building [pTNF = 99.4; 0 / 1 (P = 0.00%) round 5] [00:00:00] Preparing TNF Graph Building [pTNF = 99.1; 0 / 1 (P = 0.00%) round 6] [00:00:00] Preparing TNF Graph Building [pTNF = 98.8; 0 / 1 (P = 0.00%) round 7] [00:00:00] Preparing TNF Graph Building [pTNF = 98.5; 0 / 1 (P = 0.00%) round 8] [00:00:00] Preparing TNF Graph Building [pTNF = 98.0; 0 / 1 (P = 0.00%) round 9] [00:00:00] Preparing TNF Graph Building [pTNF = 97.7; 0 / 1 (P = 0.00%) round 10] [00:00:00] Preparing TNF Graph Building [pTNF = 97.3; 0 / 1 (P = 0.00%) round 11] [00:00:00] Preparing TNF Graph Building [pTNF = 96.9; 0 / 1 (P = 0.00%) round 12] [00:00:00] Preparing TNF Graph Building [pTNF = 96.5; 0 / 1 (P = 0.00%) round 13] [00:00:00] Preparing TNF Graph Building [pTNF = 96.1; 0 / 1 (P = 0.00%) round 14] [00:00:00] Preparing TNF Graph Building [pTNF = 95.8; 0 / 1 (P = 0.00%) round 15] [00:00:00] Preparing TNF Graph Building [pTNF = 95.3; 0 / 1 (P = 0.00%) round 16] [00:00:00] Preparing TNF Graph Building [pTNF = 95.0; 0 / 1 (P = 0.00%) round 17] [00:00:00] Preparing TNF Graph Building [pTNF = 94.7; 0 / 1 (P = 0.00%) round 18] [00:00:00] Preparing TNF Graph Building [pTNF = 94.2; 0 / 1 (P = 0.00%) round 19] [00:00:00] Preparing TNF Graph Building [pTNF = 93.9; 0 / 1 (P = 0.00%) round 20] [00:00:01] Preparing TNF Graph Building [pTNF = 93.5; 0 / 1 (P = 0.00%) round 21] [00:00:01] Preparing TNF Graph Building [pTNF = 93.0; 0 / 1 (P = 0.00%) round 22] [00:00:01] Preparing TNF Graph Building [pTNF = 92.7; 0 / 1 (P = 0.00%) round 23] [00:00:01] Preparing TNF Graph Building [pTNF = 92.4; 0 / 1 (P = 0.00%) round 24] [00:00:01] Preparing TNF Graph Building [pTNF = 92.0; 0 / 1 (P = 0.00%) round 25] [00:00:01] Preparing TNF Graph Building [pTNF = 91.5; 0 / 1 (P = 0.00%) round 26] [00:00:01] Preparing TNF Graph Building [pTNF = 91.1; 0 / 1 (P = 0.00%) round 27] [00:00:01] Preparing TNF Graph Building [pTNF = 90.7; 0 / 1 (P = 0.00%) round 28] [00:00:01] Preparing TNF Graph Building [pTNF = 90.2; 0 / 1 (P = 0.00%) round 29] [00:00:01] Preparing TNF Graph Building [pTNF = 89.9; 0 / 1 (P = 0.00%) round 30] [00:00:01] Preparing TNF Graph Building [pTNF = 89.0; 0 / 1 (P = 0.00%) round 31] [00:00:01] Preparing TNF Graph Building [pTNF = 88.0; 0 / 1 (P = 0.00%) round 32] [00:00:01] Preparing TNF Graph Building [pTNF = 86.9; 0 / 1 (P = 0.00%) round 33] [00:00:01] Preparing TNF Graph Building [pTNF = 86.0; 0 / 1 (P = 0.00%) round 34] [00:00:01] Preparing TNF Graph Building [pTNF = 84.9; 0 / 1 (P = 0.00%) round 35] [00:00:01] Preparing TNF Graph Building [pTNF = 83.9; 0 / 1 (P = 0.00%) round 36] [00:00:01] Preparing TNF Graph Building [pTNF = 82.9; 0 / 1 (P = 0.00%) round 37] [00:00:01] Preparing TNF Graph Building [pTNF = 81.9; 0 / 1 (P = 0.00%) round 38] [00:00:01] Preparing TNF Graph Building [pTNF = 80.9; 0 / 1 (P = 0.00%) round 39] [00:00:01] Preparing TNF Graph Building [pTNF = 80.0; 0 / 1 (P = 0.00%) round 40] [00:00:01] Preparing TNF Graph Building [pTNF = 79.1; 0 / 1 (P = 0.00%) round 41] [00:00:01] Preparing TNF Graph Building [pTNF = 78.0; 0 / 1 (P = 0.00%) round 42] [00:00:01] Preparing TNF Graph Building [pTNF = 76.9; 0 / 1 (P = 0.00%) round 43] [00:00:01] Preparing TNF Graph Building [pTNF = 75.8; 0 / 1 (P = 0.00%) round 44] [00:00:02] Preparing TNF Graph Building [pTNF = 74.7; 0 / 1 (P = 0.00%) round 45] [00:00:02] Preparing TNF Graph Building [pTNF = 73.6; 0 / 1 (P = 0.00%) round 46] [00:00:02] Preparing TNF Graph Building [pTNF = 72.5; 0 / 1 (P = 0.00%) round 47] [00:00:02] Preparing TNF Graph Building [pTNF = 71.4; 0 / 1 (P = 0.00%) round 48] [00:00:02] Preparing TNF Graph Building [pTNF = 70.5; 0 / 1 (P = 0.00%) round 49] [00:00:02] Finished Preparing TNF Graph Building [pTNF = 69.40] 3: [00:00:02] Finished Building TNF Graph (0 edges) [-31.8Gb / 7.7Gb] 3: No edges were formed by TNF. 3: [00:00:02] Rescuing singleton large contigs 3: [00:00:02] There are 0 bins already 3: [00:00:02] Outputting bins 3: [00:00:02] -nan% (0 bases) of large (>=2500) and 0.00% (0 bases) of small (<2500) contigs were binned. 3: 0 bins (0 bases in total) formed. 3: [00:00:02] Finished 3/3 Test #3: test_metabat2 .................... Passed 2.20 sec 100% tests passed, 0 tests failed out of 3 Total Test time (real) = 2.22 sec make[2]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/metabat-2.15' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/metabat/ cd obj-i686-linux-gnu && make -j11 install DESTDIR=/build/reproducible-path/metabat-2.15/debian/metabat AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/metabat-2.15 -B/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/metabat-2.15/debian/metabat/usr/bin/runMetaBat.sh -- Installing: /build/reproducible-path/metabat-2.15/debian/metabat/usr/bin/merge_depths.pl -- Installing: /build/reproducible-path/metabat-2.15/debian/metabat/usr/bin/aggregateBinDepths.pl -- Installing: /build/reproducible-path/metabat-2.15/debian/metabat/usr/bin/aggregateContigOverlapsByBin.pl CMake Error: failed to create symbolic link '/usr/bin/metabat': Permission denied -- Installing: /build/reproducible-path/metabat-2.15/debian/metabat/usr/bin/metabat1 -- Installing: /build/reproducible-path/metabat-2.15/debian/metabat/usr/bin/metabat2 -- Installing: /build/reproducible-path/metabat-2.15/debian/metabat/usr/bin/jgi_summarize_bam_contig_depths -- Installing: /build/reproducible-path/metabat-2.15/debian/metabat/usr/bin/contigOverlaps make[1]: Leaving directory '/build/reproducible-path/metabat-2.15/obj-i686-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/metabat-2.15' dh_install for perlscript in `grep -l '#!/usr/bin/env \+perl' debian/*/usr/bin/*` ; do \ sed -i '1s+#!/usr/bin/env perl+#!/usr/bin/perl+' ${perlscript} ; \ done make[1]: Leaving directory '/build/reproducible-path/metabat-2.15' dh_installdocs dh_installchangelogs dh_installexamples debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/metabat-2.15' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/metabat-2.15' dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package metabat: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package metabat: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'metabat' in '../metabat_2.15-4_i386.deb'. dpkg-deb: building package 'metabat-dbgsym' in '../metabat-dbgsym_2.15-4_i386.deb'. dpkg-genbuildinfo --build=binary -O../metabat_2.15-4_i386.buildinfo dpkg-genchanges --build=binary -O../metabat_2.15-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/11826 and its subdirectories I: Current time: Tue Apr 23 16:47:59 -12 2024 I: pbuilder-time-stamp: 1713934079 Wed Apr 24 04:48:01 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos16-i386.debian.net. Wed Apr 24 04:48:01 UTC 2024 I: Preparing to do remote build '2' on ionos16-i386.debian.net. Wed Apr 24 04:49:19 UTC 2024 I: Deleting $TMPDIR on ionos16-i386.debian.net. Wed Apr 24 04:49:20 UTC 2024 I: metabat_2.15-4_i386.changes: Format: 1.8 Date: Thu, 29 Sep 2022 18:15:48 +0200 Source: metabat Binary: metabat metabat-dbgsym Architecture: i386 Version: 2.15-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: metabat - robust statistical framework for reconstructing genomes from meta Changes: metabat (2.15-4) unstable; urgency=medium . * Fix watch file * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: 5b9fc33a8b2dd07a6ba2235406213d9f3038c198 3667340 metabat-dbgsym_2.15-4_i386.deb 6e6d3b73f7fe08e213fb634caafd6e8e2632a844 7921 metabat_2.15-4_i386.buildinfo 374729691bf0236fba6efa18911cfc1d12a6338b 551164 metabat_2.15-4_i386.deb Checksums-Sha256: 85e03f1b98139cd79739a1a9c7254a902a3226dbe187b6ea37734fcf086c516b 3667340 metabat-dbgsym_2.15-4_i386.deb 5b3249fbaffd06fbe9da7c5cc75ccb6392f04e0742c1574d341f890fac85b467 7921 metabat_2.15-4_i386.buildinfo 780de9e6fa49ab0688a66674cdd1cd9127a080d1bf072a197ceba478b57fc136 551164 metabat_2.15-4_i386.deb Files: 77310d00129a4955398ea67ac567a3b7 3667340 debug optional metabat-dbgsym_2.15-4_i386.deb 72eee321abc1acb833ca3103ce5714a0 7921 science optional metabat_2.15-4_i386.buildinfo 5902a7fe518bdb9506797357eb3f021c 551164 science optional metabat_2.15-4_i386.deb Wed Apr 24 04:49:21 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_7-26026.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.l9kPqdeh/metabat_2.15-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.l9kPqdeh/metabat_2.15-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.l9kPqdeh/metabat_2.15-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.l9kPqdeh/b1/metabat_2.15-4_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.l9kPqdeh/b2/metabat_2.15-4_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.360s) 0.360s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.058s) 0.058s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 651ms CPU time consumed: 652ms Wed Apr 24 04:49:22 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Wed Apr 24 04:49:22 UTC 2024 I: metabat from trixie built successfully and reproducibly on i386. Wed Apr 24 04:49:23 UTC 2024 I: Submitting .buildinfo files to external archives: Wed Apr 24 04:49:23 UTC 2024 I: Submitting 12K b1/metabat_2.15-4_i386.buildinfo.asc Wed Apr 24 04:49:24 UTC 2024 I: Submitting 12K b2/metabat_2.15-4_i386.buildinfo.asc Wed Apr 24 04:49:25 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Apr 24 04:49:25 UTC 2024 I: Done submitting .buildinfo files. Wed Apr 24 04:49:25 UTC 2024 I: Removing signed metabat_2.15-4_i386.buildinfo.asc files: removed './b1/metabat_2.15-4_i386.buildinfo.asc' removed './b2/metabat_2.15-4_i386.buildinfo.asc'