Fri Apr 26 11:43:18 UTC 2024 I: starting to build librg-blast-parser-perl/trixie/i386 on jenkins on '2024-04-26 11:43' Fri Apr 26 11:43:18 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_5/18221/console.log Fri Apr 26 11:43:18 UTC 2024 I: Downloading source for trixie/librg-blast-parser-perl=0.03-9 --2024-04-26 11:43:18-- http://deb.debian.org/debian/pool/main/libr/librg-blast-parser-perl/librg-blast-parser-perl_0.03-9.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2361 (2.3K) [text/prs.lines.tag] Saving to: ‘librg-blast-parser-perl_0.03-9.dsc’ 0K .. 100% 250M=0s 2024-04-26 11:43:18 (250 MB/s) - ‘librg-blast-parser-perl_0.03-9.dsc’ saved [2361/2361] Fri Apr 26 11:43:18 UTC 2024 I: librg-blast-parser-perl_0.03-9.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: librg-blast-parser-perl Binary: librg-blast-parser-perl Architecture: any Version: 0.03-9 Maintainer: Debian Med Packaging Team Uploaders: Laszlo Kajan , Andreas Tille Homepage: https://rostlab.org/ Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/librg-blast-parser-perl Vcs-Git: https://salsa.debian.org/med-team/librg-blast-parser-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 13), libextutils-xspp-perl, librostlab-blast0-dev (>= 1.0.1-12), librostlab3-dev, debhelper Package-List: librg-blast-parser-perl deb perl optional arch=any Checksums-Sha1: 70dde0ef7c45b2e633b2c4c738d384be6b4a0483 11635 librg-blast-parser-perl_0.03.orig.tar.gz 01157df79a0f0d181ac833ac0560f44170b8d942 6132 librg-blast-parser-perl_0.03-9.debian.tar.xz Checksums-Sha256: 215ecf7417de5ceedafc6466bd77b54ede07aab514bf3e5a0ea7245d509746cb 11635 librg-blast-parser-perl_0.03.orig.tar.gz 53957dce204a85e9e7152be04d295b16e310a050babc45d0faec2fa8cb84c0a4 6132 librg-blast-parser-perl_0.03-9.debian.tar.xz Files: 8dc732930465144a0affcb9ba38a9df9 11635 librg-blast-parser-perl_0.03.orig.tar.gz dbc5a14b9df795756bb011c1c2fd1146 6132 librg-blast-parser-perl_0.03-9.debian.tar.xz Dgit: 8d27bfcbcd341745269db698c553371b66ba681c debian archive/debian/0.03-9 https://git.dgit.debian.org/librg-blast-parser-perl -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmM2yHgUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdphdhAAmy9ZZdZuk4KL59lv42ugK2hLvpnb jazxdC6GlZHVa1zLzQUyTNDrqxlO6hDtRTWK3ZgZQFnbtlle3QRS97Q33iWS34ZK IoC7QXlULGpvoW4QTxCkXPLtZ1G3/dobPUz8Tyb+qG/SFUKxo5jy83bMM+ahZ1ya 6mSra2jagUsvEY35jinFjJh1mZFhfEYtWGQuS00x8afF209aiMi54qFfQCKtqMVs Cap7ouz4kaJmnClo/GBPxNryXlurxiZ8iOHsFAEn+JYvs1atlQG2pomTYJxTSteC kyVBjC4wl3W0CaEECctrDwUFLl1wVeAiJQHR2QgqL1t9Erli8rAs5ZqOBnK4QCij K+rPp3s8ozjxt3vzB19NkomsJHxFlMIkMfOtRflqJvaA1OhWesdF1Z5KUv2/ssa+ ZkIikRtBG0l9kNcTZRKuXjGbiyRZwyMYl80+jWgzngNY3TCrREQm/4dZ73KzH6OL 7GXV4Uf9mGiFD9dufk5kR8obzFbApMCdL/o8Y2OhxFJ0w+P6l/fZllZVZdIgnsqv nrY/cK/GS2N+EtZqm6ls+wMCmAhQ9/D9UCRpto8mtszI45yyhCl3tM+XWM35cFs/ GpDovPo+PkdbN/UX/2OwKm7S/RKICABKCEwvR850X9UoVJ5Sxa1jgpiAh37BQ2Ei ZT57hmY95Ckr79E= =+DVx -----END PGP SIGNATURE----- Fri Apr 26 11:43:18 UTC 2024 I: Checking whether the package is not for us Fri Apr 26 11:43:18 UTC 2024 I: Starting 1st build on remote node ionos12-i386.debian.net. Fri Apr 26 11:43:18 UTC 2024 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Fri Apr 26 11:44:10 UTC 2024 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Apr 25 23:43:20 -12 2024 I: pbuilder-time-stamp: 1714131800 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [librg-blast-parser-perl_0.03-9.dsc] I: copying [./librg-blast-parser-perl_0.03.orig.tar.gz] I: copying [./librg-blast-parser-perl_0.03-9.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Sep 30 10:44:08 2022 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./librg-blast-parser-perl_0.03-9.dsc: no acceptable signature found dpkg-source: info: extracting librg-blast-parser-perl in librg-blast-parser-perl-0.03 dpkg-source: info: unpacking librg-blast-parser-perl_0.03.orig.tar.gz dpkg-source: info: unpacking librg-blast-parser-perl_0.03-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_clash_YYEMPTY.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/31023/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='6d3a362c07eb4c0ba446595a16b5fcfa' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='31023' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3l0hBXve/pbuilderrc_JDee --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3l0hBXve/b1 --logfile b1/build.log librg-blast-parser-perl_0.03-9.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos12-i386 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 21 07:12 /bin -> usr/bin I: user script /srv/workspace/pbuilder/31023/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libextutils-xspp-perl, librostlab-blast0-dev (>= 1.0.1-12), librostlab3-dev, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19882 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libextutils-xspp-perl; however: Package libextutils-xspp-perl is not installed. pbuilder-satisfydepends-dummy depends on librostlab-blast0-dev (>= 1.0.1-12); however: Package librostlab-blast0-dev is not installed. pbuilder-satisfydepends-dummy depends on librostlab3-dev; however: Package librostlab3-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libextutils-xspp-perl{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} librostlab-blast0-dev{a} librostlab-blast0v5{a} librostlab3-dev{a} librostlab3t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 35 newly installed, 0 to remove and 0 not upgraded. Need to get 19.6 MB of archives. After unpacking 77.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-2+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic1 i386 1:5.45-2+b1 [114 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-2+b1 [43.0 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-3+b1 [1195 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.39.3-6 [93.3 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 man-db i386 2.12.0-3 [1413 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.191-1+b1 [194 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b2 [727 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 debhelper all 13.15.3 [901 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libextutils-xspp-perl all 0.1800-3 [146 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 librostlab-blast0v5 i386 1.0.1-14 [79.7 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 librostlab3t64 i386 1.0.20-13.1 [5052 B] Get: 34 http://deb.debian.org/debian trixie/main i386 librostlab3-dev i386 1.0.20-13.1 [12.5 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 librostlab-blast0-dev i386 1.0.1-14 [94.9 kB] Fetched 19.6 MB in 1s (30.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19882 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../02-libmagic1_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic1:i386 (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-2+b1_i386.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_i386.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-3+b1_i386.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.39.3-6_i386.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.7-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.0-3_i386.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../22-libelf1t64_0.191-1+b1_i386.deb ... Unpacking libelf1t64:i386 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../24-libicu72_72.1-4+b1_i386.deb ... Unpacking libicu72:i386 (72.1-4+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.3+b2_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-14+b1_i386.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package libextutils-xspp-perl. Preparing to unpack .../30-libextutils-xspp-perl_0.1800-3_all.deb ... Unpacking libextutils-xspp-perl (0.1800-3) ... Selecting previously unselected package librostlab-blast0v5:i386. Preparing to unpack .../31-librostlab-blast0v5_1.0.1-14_i386.deb ... Unpacking librostlab-blast0v5:i386 (1.0.1-14) ... Selecting previously unselected package librostlab3t64:i386. Preparing to unpack .../32-librostlab3t64_1.0.20-13.1_i386.deb ... Unpacking librostlab3t64:i386 (1.0.20-13.1) ... Selecting previously unselected package librostlab3-dev. Preparing to unpack .../33-librostlab3-dev_1.0.20-13.1_i386.deb ... Unpacking librostlab3-dev (1.0.20-13.1) ... Selecting previously unselected package librostlab-blast0-dev. Preparing to unpack .../34-librostlab-blast0-dev_1.0.1-14_i386.deb ... Unpacking librostlab-blast0-dev (1.0.1-14) ... Setting up libpipeline1:i386 (1.5.7-2) ... Setting up libicu72:i386 (72.1-4+b1) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libextutils-xspp-perl (0.1800-3) ... Setting up libmagic-mgc (1:5.45-2+b1) ... Setting up librostlab3t64:i386 (1.0.20-13.1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1:i386 (1:5.45-2+b1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2+b1) ... Setting up librostlab3-dev (1.0.20-13.1) ... Setting up libelf1t64:i386 (0.191-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:i386 (0.0.8-1+b1) ... Setting up librostlab-blast0v5:i386 (1.0.1-14) ... Setting up libsub-override-perl (0.10-1) ... Setting up librostlab-blast0-dev (1.0.1-14) ... Setting up libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.37-18) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/librg-blast-parser-perl-0.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../librg-blast-parser-perl_0.03-9_source.changes dpkg-buildpackage: info: source package librg-blast-parser-perl dpkg-buildpackage: info: source version 0.03-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/librg-blast-parser-perl-0.03' dh_auto_configure -- LD="'i686-linux-gnu-gcc' -Wl,-z,relro -Wl,-z,now" OPTIMIZE="-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03" /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now" "LD='i686-linux-gnu-gcc' -Wl,-z,relro -Wl,-z,now" "OPTIMIZE=-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03" Checking if your kit is complete... Warning: the following files are missing in your kit: Parser.bs Parser.c Parser.o t/RG-Blast-Parser.t Please inform the author. Generating a Unix-style Makefile Writing Makefile for RG::Blast::Parser Writing MYMETA.yml and MYMETA.json make[1]: Leaving directory '/build/reproducible-path/librg-blast-parser-perl-0.03' dh_auto_build make -j11 make[1]: Entering directory '/build/reproducible-path/librg-blast-parser-perl-0.03' cp lib/RG/Blast/Parser.pm blib/lib/RG/Blast/Parser.pm AutoSplitting blib/lib/RG/Blast/Parser.pm (blib/lib/auto/RG/Blast/Parser) Running Mkbootstrap for Parser () "/usr/bin/perl" "/usr/share/perl/5.38/ExtUtils/xsubpp" -C++ -hiertype -noprototypes -typemap '/usr/share/perl/5.38/ExtUtils/typemap' -typemap '/build/reproducible-path/librg-blast-parser-perl-0.03/perlobject.map' -typemap '/build/reproducible-path/librg-blast-parser-perl-0.03/typemap' Parser.xs > Parser.xsc chmod 644 "Parser.bs" "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Parser.bs blib/arch/auto/RG/Blast/Parser/Parser.bs 644 mv Parser.xsc Parser.c g++ -c -I. -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/librg-blast-parser-perl-0.03=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++03 -DVERSION=\"0.03\" -DXS_VERSION=\"0.03\" -fPIC "-I/usr/lib/i386-linux-gnu/perl/5.38/CORE" Parser.c cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ /usr/bin/perl -MExtUtils::XSpp::Cmd -e xspp -- --typemap=typemap.xsp Parser.xsp: In function 'void XS_RG__Blast__Parser_parse(PerlInterpreter*, CV*)': /usr/bin/perl -MExtUtils::XSpp::Cmd -e xspp -- --typemap=typemap.xsp Parser.xsp:51:57: warning: too many arguments for format [-Wformat-extra-args] rm -f blib/arch/auto/RG/Blast/Parser/Parser.so 'i686-linux-gnu-gcc' -Wl,-z,relro -Wl,-z,now -shared -L/usr/local/lib -fstack-protector-strong Parser.o -o blib/arch/auto/RG/Blast/Parser/Parser.so \ -lrostlab-blast \ chmod 755 blib/arch/auto/RG/Blast/Parser/Parser.so Manifying 1 pod document make[1]: Leaving directory '/build/reproducible-path/librg-blast-parser-perl-0.03' dh_auto_test make -j11 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/librg-blast-parser-perl-0.03' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Parser.bs blib/arch/auto/RG/Blast/Parser/Parser.bs 644 PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/01RG-Blast-Parserload.t .. 1..1 ok 1 - use RG::Blast::Parser; ok examples/badformat.ali:46.1-7: invalid character 'Q' examples/badformat.ali:46.1-8: invalid character 'u' examples/badformat.ali:46.1-9: invalid character 'e' examples/badformat.ali:46.1-10: invalid character 'r' examples/badformat.ali:46.1-11: invalid character 'y' examples/badformat.ali:46.1-12: invalid character ':' examples/badformat.ali:46.14: syntax error, unexpected INT t/02test.t ................. 1..23 ok 1 - use RG::Blast::Parser; ok 2 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 3 - RG::Blast::Parser->can(...) ok 4 ok 5 ok 6 ok 7 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 8 - RG::Blast::Parser->can(...) ok 9 ok 10 ok 11 ok 12 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 13 - RG::Blast::Parser->can(...) ok 14 ok 15 ok 16 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 17 - RG::Blast::Parser->can(...) ok 18 ok 19 ok 20 - An object of class 'RG::Blast::Parser' isa 'RG::Blast::Parser' ok 21 - RG::Blast::Parser->can(...) ok 22 ok 23 ok All tests successful. Files=2, Tests=24, 1 wallclock secs ( 0.04 usr 0.00 sys + 0.24 cusr 0.04 csys = 0.32 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/librg-blast-parser-perl-0.03' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/librg-blast-parser-perl/ make -j11 install DESTDIR=/build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/librg-blast-parser-perl-0.03' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- Parser.bs blib/arch/auto/RG/Blast/Parser/Parser.bs 644 Manifying 1 pod document Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl/usr/lib/i386-linux-gnu/perl5/5.38/auto/RG/Blast/Parser/Parser.so Installing /build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl/usr/lib/i386-linux-gnu/perl5/5.38/auto/RG/Blast/Parser/autosplit.ix Installing /build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl/usr/lib/i386-linux-gnu/perl5/5.38/RG/Blast/Parser.pm Installing /build/reproducible-path/librg-blast-parser-perl-0.03/debian/librg-blast-parser-perl/usr/share/man/man3/RG::Blast::Parser.3pm make[1]: Leaving directory '/build/reproducible-path/librg-blast-parser-perl-0.03' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'librg-blast-parser-perl-dbgsym' in '../librg-blast-parser-perl-dbgsym_0.03-9_i386.deb'. dpkg-deb: building package 'librg-blast-parser-perl' in '../librg-blast-parser-perl_0.03-9_i386.deb'. dpkg-genbuildinfo --build=binary -O../librg-blast-parser-perl_0.03-9_i386.buildinfo dpkg-genchanges --build=binary -O../librg-blast-parser-perl_0.03-9_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/31023 and its subdirectories I: Current time: Thu Apr 25 23:44:09 -12 2024 I: pbuilder-time-stamp: 1714131849 Fri Apr 26 11:44:11 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net. Fri Apr 26 11:44:11 UTC 2024 I: Preparing to do remote build '2' on ionos6-i386.debian.net. Fri Apr 26 11:44:43 UTC 2024 I: Deleting $TMPDIR on ionos6-i386.debian.net. Fri Apr 26 11:44:43 UTC 2024 I: librg-blast-parser-perl_0.03-9_i386.changes: Format: 1.8 Date: Fri, 30 Sep 2022 12:04:56 +0200 Source: librg-blast-parser-perl Binary: librg-blast-parser-perl librg-blast-parser-perl-dbgsym Architecture: i386 Version: 0.03-9 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: librg-blast-parser-perl - very fast NCBI BLAST parser - binding for Perl Closes: 1012988 Changes: librg-blast-parser-perl (0.03-9) unstable; urgency=medium . * Team upload. * Rebuild against librostlab-blast 1.0.1-13. (Closes: #1012988) * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: 8a0ad82d664258422b5140fc5aefe14848ebc953 185540 librg-blast-parser-perl-dbgsym_0.03-9_i386.deb 7be7f528f4579e412ab4195c21232a7e2d526606 5388 librg-blast-parser-perl_0.03-9_i386.buildinfo 9646339790ed7a1d2a0615c74ce2b7b5d033ef51 35916 librg-blast-parser-perl_0.03-9_i386.deb Checksums-Sha256: 9f197f71af8a6cb304de1c1c48e3ce7c60f830012f5f16183e22b932a12e510e 185540 librg-blast-parser-perl-dbgsym_0.03-9_i386.deb 1c797fb496c36180a54433ec93729ba182492e258324bc1e6efb8076ec54b0aa 5388 librg-blast-parser-perl_0.03-9_i386.buildinfo 7f6c9b73b0cbeaf8ba3ca039ed176aea9fe510608bbdb0a056015d456921e614 35916 librg-blast-parser-perl_0.03-9_i386.deb Files: dda766147feb07faf40191fca328fb6a 185540 debug optional librg-blast-parser-perl-dbgsym_0.03-9_i386.deb ef135866ab00c1eba5761d278310ec8c 5388 perl optional librg-blast-parser-perl_0.03-9_i386.buildinfo b62f1f60542ff8c0e1b28c920078103d 35916 perl optional librg-blast-parser-perl_0.03-9_i386.deb Fri Apr 26 11:44:44 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_5-18221.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.3l0hBXve/librg-blast-parser-perl_0.03-9.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.3l0hBXve/librg-blast-parser-perl_0.03-9.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.3l0hBXve/librg-blast-parser-perl_0.03-9.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.3l0hBXve/b1/librg-blast-parser-perl_0.03-9_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.3l0hBXve/b2/librg-blast-parser-perl_0.03-9_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.335s) 0.335s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.017s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 648ms CPU time consumed: 645ms Fri Apr 26 11:44:45 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Fri Apr 26 11:44:45 UTC 2024 I: librg-blast-parser-perl from trixie built successfully and reproducibly on i386. Fri Apr 26 11:44:47 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Apr 26 11:44:47 UTC 2024 I: Submitting 8.0K b1/librg-blast-parser-perl_0.03-9_i386.buildinfo.asc Fri Apr 26 11:44:49 UTC 2024 I: Submitting 8.0K b2/librg-blast-parser-perl_0.03-9_i386.buildinfo.asc Fri Apr 26 11:44:51 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Apr 26 11:44:51 UTC 2024 I: Done submitting .buildinfo files. Fri Apr 26 11:44:51 UTC 2024 I: Removing signed librg-blast-parser-perl_0.03-9_i386.buildinfo.asc files: removed './b1/librg-blast-parser-perl_0.03-9_i386.buildinfo.asc' removed './b2/librg-blast-parser-perl_0.03-9_i386.buildinfo.asc'