Mon Apr 29 09:15:29 UTC 2024 I: starting to build ivar/trixie/i386 on jenkins on '2024-04-29 09:15' Mon Apr 29 09:15:29 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_4/19057/console.log Mon Apr 29 09:15:29 UTC 2024 I: Downloading source for trixie/ivar=1.4.2+dfsg-3 --2024-04-29 09:15:29-- http://deb.debian.org/debian/pool/main/i/ivar/ivar_1.4.2%2bdfsg-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2205 (2.2K) [text/prs.lines.tag] Saving to: ‘ivar_1.4.2+dfsg-3.dsc’ 0K .. 100% 268M=0s 2024-04-29 09:15:29 (268 MB/s) - ‘ivar_1.4.2+dfsg-3.dsc’ saved [2205/2205] Mon Apr 29 09:15:29 UTC 2024 I: ivar_1.4.2+dfsg-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: ivar Binary: ivar, ivar-doc Architecture: any all Version: 1.4.2+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://github.com/andersen-lab/ivar Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/ivar Vcs-Git: https://salsa.debian.org/med-team/ivar.git Testsuite: autopkgtest Testsuite-Triggers: samtools Build-Depends: debhelper-compat (= 13), libhts-dev Package-List: ivar deb science optional arch=any ivar-doc deb doc optional arch=all Checksums-Sha1: 8424d860241b5fdb7cfbb71d8d8d85d6d9162962 672788 ivar_1.4.2+dfsg.orig.tar.xz 3c8e54454b0d7d0870d99a6a746dfc8c302980ce 46324 ivar_1.4.2+dfsg-3.debian.tar.xz Checksums-Sha256: 87fbc667080e95823734eeca0dfcec058ff18f1aca7aff89de7a82217a7d2968 672788 ivar_1.4.2+dfsg.orig.tar.xz ea91d32c705d08f6397c9234d3d127f7be201c2c176be4aa83e4f72b76363ab0 46324 ivar_1.4.2+dfsg-3.debian.tar.xz Files: d2c0875cd8d094e11207d0d185099282 672788 ivar_1.4.2+dfsg.orig.tar.xz 7b90003c4369da383c9942994b2e1f9c 46324 ivar_1.4.2+dfsg-3.debian.tar.xz Dgit: cc92e3dc269b4f24682dfdaf04695cfc210a8aef debian archive/debian/1.4.2+dfsg-3 https://git.dgit.debian.org/ivar -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmVvPnsUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdqrRg//RuzxRvOd8zpP3SzVppDe33LrwziH 38YnxXtMC5AMGDbUIgJSYCyynw3QqfgIA/j2SXHXjf2eizG/btaMBACvbnHJhifN Jy+iDNFeN9CqA8Lsq5seQIBKAOqXt2wcuRQvgt5/d3K3Y8wD8XYQ6p5wsbZNChbR TbpSfSQLo42NuXhugPi5sdis1mFFuS0eTcWHP0wi+/QwHJKNBKNTnMkd9N7vT2F7 1Rt4Kcjo8zFkUeISbp9Wm24fUTCyNH+SghBxdChhTaLiOgK5xZ4mA1UO5aj2vhKG dFSLUhzvylwNjgaty2IRFAVixdmngKmxZbX1c56GmfPqKWv2q5/iZC08+bKm3vXH 5zCZLEc5rpt3tukk8ihudm3M2BkZ3Avv4MkNACNQSSPGjhqornk5HbN5lOhPGoR2 VeUaufnhPuLOOPn5JLJs82QTGI9ihvvkfqnhYZAjYw3iImY1Binvp5mEPDKIpwAg OAcxifshzNYiIFfZri6XwjfimbLj/i+z28xUgGXycZLfBSvXJsKrHF/4cMxtgeKo FtsS8rCSEyaH+ZuTPu+sr5RTmvIEMsueupaARufs7V14xI3UFxLiLiLH48+x4JkM X792k9BQMVj42wyC6AUxzfBX2WmS4Udsh3egj9LX57C3MBm17SiCG6PKFUVmdbEc 8O4MaQ869zd8H2c= =3cR5 -----END PGP SIGNATURE----- Mon Apr 29 09:15:29 UTC 2024 I: Checking whether the package is not for us Mon Apr 29 09:15:29 UTC 2024 I: Starting 1st build on remote node ionos16-i386.debian.net. Mon Apr 29 09:15:29 UTC 2024 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Mon Apr 29 09:17:01 UTC 2024 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jun 1 03:38:32 -12 2025 I: pbuilder-time-stamp: 1748792312 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [ivar_1.4.2+dfsg-3.dsc] I: copying [./ivar_1.4.2+dfsg.orig.tar.xz] I: copying [./ivar_1.4.2+dfsg-3.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Dec 5 15:15:07 2023 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./ivar_1.4.2+dfsg-3.dsc: no acceptable signature found dpkg-source: info: extracting ivar in ivar-1.4.2+dfsg dpkg-source: info: unpacking ivar_1.4.2+dfsg.orig.tar.xz dpkg-source: info: unpacking ivar_1.4.2+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Fix-warning.patch dpkg-source: info: applying forward-build-options.patch dpkg-source: info: applying privacy-breach.patch dpkg-source: info: applying gcc-13.patch dpkg-source: info: applying gcc-13-2.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/44940/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='deb3e71b3eb344fc96cfba40bd225148' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='44940' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.69e9dKKW/pbuilderrc_9F6N --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.69e9dKKW/b1 --logfile b1/build.log ivar_1.4.2+dfsg-3.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 27 17:46 /bin -> usr/bin I: user script /srv/workspace/pbuilder/44940/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libhts-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19709 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libhts-dev; however: Package libhts-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 19.3 MB of archives. After unpacking 73.7 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: libhts-dev but it is not installable The following actions will resolve these dependencies: Remove the following packages: 1) libssl3 [3.1.5-1 (now)] Install the following packages: 2) libbrotli1 [1.1.0-2+b3 (testing)] 3) libcom-err2 [1.47.0-2.4 (testing)] 4) libcurl3t64-gnutls [8.7.1-3 (testing)] 5) libcurl4-gnutls-dev [8.7.1-3 (testing)] 6) libdeflate-dev [1.20-1 (testing)] 7) libdeflate0 [1.20-1 (testing)] 8) libgssapi-krb5-2 [1.20.1-5+b1 (testing)] 9) libhts-dev [1.19+ds-1 (testing)] 10) libhts3 [1.19+ds-1 (testing)] 11) libhtscodecs2 [1.6.0-1+b1 (testing)] 12) libk5crypto3 [1.20.1-5+b1 (testing)] 13) libkeyutils1 [1.6.3-3 (testing)] 14) libkrb5-3 [1.20.1-5+b1 (testing)] 15) libkrb5support0 [1.20.1-5+b1 (testing)] 16) libldap-2.5-0 [2.5.13+dfsg-5+b3 (testing)] 17) liblzma-dev [5.6.1+really5.4.5-1 (testing)] 18) libnghttp2-14 [1.59.0-1 (testing)] 19) libpsl5t64 [0.21.2-1.1 (testing)] 20) librtmp1 [2.4+20151223.gitfa8646d.1-2+b4 (testing)] 21) libsasl2-2 [2.1.28+dfsg1-4+b1 (testing)] 22) libsasl2-modules-db [2.1.28+dfsg1-4+b1 (testing)] 23) libssh2-1t64 [1.11.0-4.1+b2 (testing)] 24) libssl3t64 [3.2.1-3 (testing)] 25) zlib1g-dev [1:1.3.dfsg-3.1 (testing)] The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libhts-dev{a} libhts3{a} libhtscodecs2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpsl5t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libssl3t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages will be REMOVED: libssl3{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 54 newly installed, 1 to remove and 0 not upgraded. Need to get 27.8 MB of archives. After unpacking 90.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libssl3t64 i386 3.2.1-3 [2234 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-2+b1 [314 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 libmagic1 i386 1:5.45-2+b1 [114 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-2+b1 [43.0 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-3+b1 [1195 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.39.3-6 [93.3 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 man-db i386 2.12.0-3 [1413 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autoconf all 2.71-3 [332 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 autopoint all 0.21-14 [496 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 24 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.191-1+b1 [194 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b3 [727 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 debhelper all 13.15.3 [901 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.0-2.4 [20.6 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.20.1-5+b1 [35.9 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.20.1-5+b1 [83.2 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get: 37 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.20.1-5+b1 [359 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.20.1-5+b1 [145 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-4+b1 [20.7 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-4+b1 [60.7 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5+b3 [196 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.59.0-1 [82.5 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1 [57.4 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b4 [62.0 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.0-4.1+b2 [225 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libcurl3t64-gnutls i386 8.7.1-3 [467 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libcurl4-gnutls-dev i386 8.7.1-3 [589 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 libdeflate-dev i386 1.20-1 [56.0 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 libhtscodecs2 i386 1.6.0-1+b1 [68.5 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 libhts3 i386 1.19+ds-1 [490 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 liblzma-dev i386 5.6.1+really5.4.5-1 [304 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg-3.1 [915 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 libhts-dev i386 1.19+ds-1 [1660 kB] Fetched 27.8 MB in 0s (64.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libssl3:i386: dependency problems, but removing anyway as you requested: coreutils depends on libssl3 (>= 3.0.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19709 files and directories currently installed.) Removing libssl3:i386 (3.1.5-1) ... Selecting previously unselected package libssl3t64:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19696 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.2.1-3_i386.deb ... Unpacking libssl3t64:i386 (3.2.1-3) ... Setting up libssl3t64:i386 (3.2.1-3) ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19711 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../02-libmagic1_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic1:i386 (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-2+b1_i386.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_i386.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-3+b1_i386.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.39.3-6_i386.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.7-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-2) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/ivar-1.4.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ivar_1.4.2+dfsg-3_source.changes dpkg-buildpackage: info: source package ivar dpkg-buildpackage: info: source version 1.4.2+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf configure.ac:12: installing './compile' configure.ac:58: installing './config.guess' configure.ac:58: installing './config.sub' configure.ac:6: installing './install-sh' configure.ac:6: installing './missing' src/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' dh_auto_configure ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gawk... (cached) mawk checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking how to run the C preprocessor... gcc -E checking for main in -lhts... no checking for main in -lpthread... no checking for main in -lz... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for unistd.h... (cached) yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for inline... inline checking for int16_t... yes checking for int32_t... yes checking for int8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint8_t... yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for GNU libc compatible malloc... no checking for GNU libc compatible realloc... no checking for memmove... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands dh_auto_build make -j22 make[1]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' make all-recursive make[2]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' Making all in src make[3]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/src' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o ivar.o ivar.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o call_consensus_pileup.o call_consensus_pileup.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o alignment.o alignment.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o suffix_tree.o suffix_tree.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o trim_primer_quality.o trim_primer_quality.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o remove_reads_from_amplicon.o remove_reads_from_amplicon.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o call_variants.o call_variants.cpp Using built-in specs. COLLECT_GCC=g++ Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o primer_bed.o primer_bed.cpp Using built-in specs. COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ivar.o' '-shared-libgcc' '-mtune=generic' '-march=i686' /usr/libexec/gcc/i686-linux-gnu/13/cc1plus -quiet -v -I . -I .. -imultiarch i386-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 ivar.cpp -quiet -dumpbase ivar.cpp -dumpbase-ext .cpp -mtune=generic -march=i686 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -version -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -ffloat-store -fasynchronous-unwind-tables -o /tmp/ccNE0xTr.s g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o allele_functions.o allele_functions.cpp COLLECT_GCC=g++ Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) Using built-in specs. COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' 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COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' 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COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' 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'-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' 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Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' 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'-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-mapg++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -c -o interval_tree.o interval_tree.cpp =/build/reproducible-path/ivar-1.4.2+dfsg=.' 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COLLECT_GCC=g++ Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) COLLECT_GCC=g++ Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --prUsing built-in specs. ogram-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' 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'-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'primer_bed.o' '-shared-libgcc' '-mtune=generic' '-march=i686' /usr/libexec/gcc/i686-linux-gnu/13/cc1plus -quiet -v -I . -I .. -imultiarch i386-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 primer_bed.cpp -quiet -dumpbase primer_bed.cpp -dumpbase-ext .cpp -mtune=generic -march=i686 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -version -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -ffloat-store -fasynchronous-unwind-tables -o /tmp/ccLoDZMR.s COLLECT_GCC=g++ Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_masked_amplicons.o' '-shared-libgcc' '-mtune=generic' '-march=i686' /usr/libexec/gcc/i686-linux-gnu/13/cc1plus -quiet -v -I . -I .. -imultiarch i386-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 get_masked_amplicons.cpp -quiet -dumpbase get_masked_amplicons.cpp -dumpbase-ext .cpp -mtune=generic -march=i686 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -version -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -ffloat-store -fasynchronous-unwind-tables -o /tmp/ccOxjHAN.s GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" Using built-in specs. #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" COLLECT_GCC=g++ ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugsignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Using built-in specs. Thread model: posix Supported LTO compression algorithms: zlib zstd#include "..." search starts here: #include <...> search starts here: gcc version 13.2.0 (Debian 13.2.0-23) . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_common_variants.o' '-shared-libgcc' '-mtune=generic' '-march=i686' /usr/libexec/gcc/i686-linux-gnu/13/cc1plus -quiet -v -I . -I .. -imultiarch i386-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 get_common_variants.cpp -quiet -dumpbase get_common_variants.cpp -dumpbase-ext .cpp -mtune=generic -march=i686 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -version -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -ffloat-store -fasynchronous-unwind-tables -o /tmp/ccf6xcWP.s GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 COLLECT_GCC=g++ Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.BugsUsing built-in specs. ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstdCOLLECT_GCC=g++ Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) gcc version 13.2.0 (Debian 13.2.0-23) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ref_seq.o' '-shared-libgcc' '-mtune=generic' '-march=i686' /usr/libexec/gcc/i686-linux-gnu/13/cc1plus -quiet -v -I . -I .. -imultiarch i386-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 ref_seq.cpp -quiet -dumpbase ref_seq.cpp -dumpbase-ext .cpp -mtune=generic -march=i686 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -versionGNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -ffloat-store -fasynchronous-unwind-tables -o /tmp/ccboPBjf.s GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'parse_gff.o' '-shared-libgcc' '-mtune=generic' '-march=i686' GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP /usr/libexec/gcc/i686-linux-gnu/13/cc1plus -quiet -v -I . -I .. -imultiarch i386-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 parse_gff.cppGGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 -quiet -dumpbase parse_gff.cpp -dumpbase-ext .cpp -mtune=generic -march=i686 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -version -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -ffloat-store -fasynchronous-unwind-tables -o /tmp/ccfKSbUI.s ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP Using built-in specs. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP COLLECT_GCC=g++ GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 End of search list. COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'interval_tree.o' '-shared-libgcc' '-mtune=generic' '-march=i686' /usr/libexec/gcc/i686-linux-gnu/13/cc1plus -quiet -v -I . -I .. -imultiarch i386-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 interval_tree.cpp -quiet -dumpbase interval_tree.cpp -dumpbase-ext .cpp -mtune=generic -march=i686 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -version -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -ffloat-store -fasynchronous-unwind-tables -o /tmp/ccYFaoBC.s ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" Compiler executable checksum: ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" cf2186eed1#include "..." search starts here: 6824#include <...> search starts here: 3a . b6 .. 58 /usr/include/c++/13 2f /usr/include/i386-linux-gnu/c++/13 c4 /usr/include/c++/13/backward bd /usr/lib/gcc/i686-linux-gnu/13/include a9 /usr/local/include 4e /usr/include/i386-linux-gnu 5c /usr/include End of search list. ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: cf2186eed168243ab6582fc4bda94e5c ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/13 /usr/include/i386-linux-gnu/c++/13 /usr/include/c++/13/backward /usr/lib/gcc/i686-linux-gnu/13/include /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. Compiler executable checksum: cf2186eed168243ab6582fc4bda94e5c Compiler executable checksum: cf2186eed168243ab6582fc4bda94e5c Compiler executable checksum: Compiler executable checksum: cf2186eed168243ab6582fc4bda94e5c cf2186eed168243ab6582fc4bda94e5c GNU C++17 (Debian 13.2.0-23) version 13.2.0 (i686-linux-gnu) compiled by GNU C version 13.2.0, Compiler executable checksum: cf2186eed168243ab6582fc4bda94e5c GMP version 6.3.0, MPFR version 4.2.1, MPC version 1.3.1, isl version isl-0.26-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/i386-linux-gnu/c++/13" ignoring nonexistent directory "/usr/local/include/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed/i386-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/include-fixed" Compiler executable checksum: ignoring nonexistent directory "/usr/lib/gcc/i686-linux-gnu/13/../../../../i686-linux-gnu/include" cf2186eed168#include "..." search starts here: 243a#include <...> search starts here: b6 . 58 .. 2f /usr/include/c++/13 c4bd /usr/include/i386-linux-gnu/c++/13 a9 /usr/include/c++/13/backward 4e /usr/lib/gcc/i686-linux-gnu/13/include 5c /usr/local/include /usr/include/i386-linux-gnu /usr/include End of search list. Compiler executable checksum: cf2186eed168243ab6582fc4bda94e5c Compiler executable checksum: cf2186eed168243ab6582fc4bda94e5c Compiler executable checksum: cf2186eed168243ab6582fc4bda94eCompiler executable checksum: 5c cf2186eed168243ab6582fc4bda94e5c Compiler executable checksum: cf2186eed168243ab6582fc4bda94e5c Compiler executable checksum: cf2186eed168243ab6582fc4bda94e5c COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'alignment.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o alignment.o /tmp/cccxAWJw.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'alignment.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'alignment.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'interval_tree.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o interval_tree.o /tmp/ccYFaoBC.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'interval_tree.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'interval_tree.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_masked_amplicons.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o get_masked_amplicons.o /tmp/ccOxjHAN.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_masked_amplicons.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'get_masked_amplicons.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'remove_reads_from_amplicon.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o remove_reads_from_amplicon.o /tmp/cc7KVPSK.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'remove_reads_from_amplicon.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'remove_reads_from_amplicon.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'allele_functions.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o allele_functions.o /tmp/ccIsKSYe.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ref_seq.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o ref_seq.o /tmp/ccboPBjf.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ref_seq.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'ref_seq.' MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'allele_functions.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'allele_functions.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_variants.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o call_variants.o /tmp/ccmsoEJh.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_variants.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'call_variants.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'primer_bed.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o primer_bed.o /tmp/ccLoDZMR.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ivar.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o ivar.o /tmp/ccNE0xTr.s COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_common_variants.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -vGNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 -I . -I .. --gdwarf-5 --32 -o get_common_variants.o /tmp/ccf6xcWP.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ivar.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'ivar.' MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_common_variants.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'get_common_variants.' MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'primer_bed.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'primer_bed.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_consensus_pileup.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o call_consensus_pileup.o /tmp/cclc2Rz3.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'trim_primer_quality.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o trim_primer_quality.o /tmp/ccWoJwcm.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'suffix_tree.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o suffix_tree.o /tmp/cc2YldmJ.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_consensus_pileup.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'call_consensus_pileup.' MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'trim_primer_quality.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'trim_primer_quality.' MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'suffix_tree.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'suffix_tree.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'parse_gff.o' '-shared-libgcc' '-mtune=generic' '-march=i686' as -v -I . -I .. --gdwarf-5 --32 -o parse_gff.o /tmp/ccfKSbUI.s GNU assembler version 2.42 (i686-linux-gnu) using BFD version (GNU Binutils for Debian) 2.42 MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'parse_gff.o' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'parse_gff.' g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o ivar ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o interval_tree.o -lhts -lz -lpthread -lhts -lz -lpthread Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/usr/libexec/gcc/i686-linux-gnu/13/lto-wrapper Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) MAKEFLAGS=w -j22 COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-o' 'ivar' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'ivar.' /usr/libexec/gcc/i686-linux-gnu/13/collect2 -plugin /usr/libexec/gcc/i686-linux-gnu/13/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/i686-linux-gnu/13/lto-wrapper -plugin-opt=-fresolution=/tmp/ccyH5kxR.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr -m elf_i386 --hash-style=gnu --as-needed -dynamic-linker /lib/ld-linux.so.2 -pie -o ivar /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/Scrt1.o /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/13/crtbeginS.o -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -z relro -z now ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o interval_tree.o -lhts -lz -lpthread -lhts -lz -lpthread -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/i686-linux-gnu/13/crtendS.o /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crtn.o COLLECT_GCC_OPTIONS='-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-o' 'ivar' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'ivar.' make[3]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/src' Making all in tests make[3]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[3]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[3]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[2]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[1]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' dh_auto_test --no-parallel make -j1 check "TESTSUITEFLAGS=-j1 --verbose" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' Making check in src make[3]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/src' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/src' Making check in tests make[3]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make check_primer_trim check_trim check_quality_trim check_consensus check_allele_depth check_consensus_threshold check_consensus_min_depth check_consensus_seq_id check_primer_bed check_getmasked check_removereads check_variants check_common_variants check_unpaired_trim check_primer_trim_edge_cases check_isize_trim check_interval_tree check_amplicon_search check_consensus_min_insert_threshold make[4]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_primer_trim.o test_primer_trim.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/trim_primer_quality.o ../src/trim_primer_quality.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/primer_bed.o ../src/primer_bed.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/interval_tree.o ../src/interval_tree.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_primer_trim test_primer_trim.o ../src/trim_primer_quality.o ../src/primer_bed.o ../src/interval_tree.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_trim.o test_trim.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_trim test_trim.o ../src/trim_primer_quality.o ../src/primer_bed.o ../src/interval_tree.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o check_quality_trim.o check_quality_trim.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_quality_trim check_quality_trim.o ../src/trim_primer_quality.o ../src/primer_bed.o ../src/interval_tree.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_call_consensus_from_plup.o test_call_consensus_from_plup.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/call_consensus_pileup.o ../src/call_consensus_pileup.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/allele_functions.o ../src/allele_functions.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_consensus test_call_consensus_from_plup.o ../src/call_consensus_pileup.o ../src/allele_functions.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_allele_depth.o test_allele_depth.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_allele_depth test_allele_depth.o ../src/allele_functions.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_consensus_threshold.o test_consensus_threshold.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_consensus_threshold test_consensus_threshold.o ../src/call_consensus_pileup.o ../src/allele_functions.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_consensus_min_depth.o test_consensus_min_depth.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_consensus_min_depth test_consensus_min_depth.o ../src/call_consensus_pileup.o ../src/allele_functions.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_consensus_seq_id.o test_consensus_seq_id.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_consensus_seq_id test_consensus_seq_id.o ../src/call_consensus_pileup.o ../src/allele_functions.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_primer_bed.o test_primer_bed.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_primer_bed test_primer_bed.o ../src/primer_bed.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_getmasked.o test_getmasked.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/get_masked_amplicons.o ../src/get_masked_amplicons.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_getmasked test_getmasked.o ../src/get_masked_amplicons.o ../src/primer_bed.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_removereads.o test_removereads.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/remove_reads_from_amplicon.o ../src/remove_reads_from_amplicon.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_removereads test_removereads.o ../src/remove_reads_from_amplicon.o ../src/primer_bed.o ../src/trim_primer_quality.o ../src/interval_tree.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_variants.o test_variants.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/call_variants.o ../src/call_variants.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/parse_gff.o ../src/parse_gff.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/ref_seq.o ../src/ref_seq.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_variants test_variants.o ../src/call_variants.o ../src/allele_functions.o ../src/parse_gff.o ../src/ref_seq.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_common_variants.o test_common_variants.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o ../src/get_common_variants.o ../src/get_common_variants.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_common_variants test_common_variants.o ../src/get_common_variants.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_unpaired_trim.o test_unpaired_trim.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_unpaired_trim test_unpaired_trim.o ../src/trim_primer_quality.o ../src/primer_bed.o ../src/interval_tree.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_primer_trim_edge_cases.o test_primer_trim_edge_cases.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_primer_trim_edge_cases test_primer_trim_edge_cases.o ../src/trim_primer_quality.o ../src/primer_bed.o ../src/interval_tree.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_isize_trim.o test_isize_trim.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_isize_trim test_isize_trim.o ../src/trim_primer_quality.o ../src/primer_bed.o ../src/interval_tree.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_interval_tree.o test_interval_tree.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_interval_tree test_interval_tree.o ../src/primer_bed.o ../src/interval_tree.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_amplicon_search.o test_amplicon_search.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_amplicon_search test_amplicon_search.o ../src/trim_primer_quality.o ../src/primer_bed.o ../src/interval_tree.o -lhts -lz -lpthread g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -c -o test_consensus_min_insert_threshold.o test_consensus_min_insert_threshold.cpp g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o check_consensus_min_insert_threshold test_consensus_min_insert_threshold.o ../src/call_consensus_pileup.o ../src/allele_functions.o -lhts -lz -lpthread make[4]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make check-TESTS make[4]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[5]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' PASS: check_primer_trim PASS: check_trim PASS: check_quality_trim PASS: check_consensus PASS: check_allele_depth PASS: check_consensus_threshold PASS: check_consensus_min_depth PASS: check_consensus_seq_id PASS: check_primer_bed PASS: check_getmasked PASS: check_removereads PASS: check_variants PASS: check_common_variants PASS: check_unpaired_trim PASS: check_primer_trim_edge_cases PASS: check_isize_trim PASS: check_interval_tree PASS: check_amplicon_search PASS: check_consensus_min_insert_threshold ============================================================================ Testsuite summary for ivar 1.4.2 ============================================================================ # TOTAL: 19 # PASS: 19 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[4]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[3]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[3]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[3]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[2]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[1]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' create-stamp debian/debhelper-build-stamp dh_prep debian/rules execute_before_dh_auto_install make[1]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' chmod -x /build/reproducible-path/ivar-1.4.2+dfsg/data/primer_pair_test/test_primer_pair.bed make[1]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' dh_auto_install make -j22 install DESTDIR=/build/reproducible-path/ivar-1.4.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' Making install in src make[2]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/src' g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -v -g -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o ivar ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o interval_tree.o -lhts -lz -lpthread -lhts -lz -lpthread Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/usr/libexec/gcc/i686-linux-gnu/13/lto-wrapper Target: i686-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 13.2.0-23' --with-bugurl=file:///usr/share/doc/gcc-13/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-13 --program-prefix=i686-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-targets=all --enable-multiarch --disable-werror --with-arch-32=i686 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=i686-linux-gnu --host=i686-linux-gnu --target=i686-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 13.2.0 (Debian 13.2.0-23) MAKEFLAGS=w -j22 -- DESTDIR=/build/reproducible-path/ivar-1.4.2+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no COMPILER_PATH=/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/13/:/usr/libexec/gcc/i686-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/i686-linux-gnu/13/:/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/:/usr/lib/gcc/i686-linux-gnu/13/../../../../lib/:/lib/i386-linux-gnu/:/lib/../lib/:/usr/lib/i386-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/i686-linux-gnu/13/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-o' 'ivar' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'ivar.' /usr/libexec/gcc/i686-linux-gnu/13/collect2 -plugin /usr/libexec/gcc/i686-linux-gnu/13/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/i686-linux-gnu/13/lto-wrapper -plugin-opt=-fresolution=/tmp/cc3XOiuR.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr -m elf_i386 --hash-style=gnu --as-needed -dynamic-linker /lib/ld-linux.so.2 -pie -o ivar /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/Scrt1.o /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/13/crtbeginS.o -L/usr/lib/gcc/i686-linux-gnu/13 -L/usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/13/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/13/../../.. -z relro -z now ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o interval_tree.o -lhts -lz -lpthread -lhts -lz -lpthread -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/i686-linux-gnu/13/crtendS.o /usr/lib/gcc/i686-linux-gnu/13/../../../i386-linux-gnu/crtn.o COLLECT_GCC_OPTIONS='-g' '-O2' '-ffile-prefix-map=/build/reproducible-path/ivar-1.4.2+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-ffloat-store' '-v' '-g' '-Wall' '-Wextra' '-Werror' '-o' 'ivar' '-shared-libgcc' '-mtune=generic' '-march=i686' '-dumpdir' 'ivar.' make[3]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/src' make[3]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/reproducible-path/ivar-1.4.2+dfsg/debian/tmp/usr/bin' /usr/bin/install -c ivar '/build/reproducible-path/ivar-1.4.2+dfsg/debian/tmp/usr/bin' make[3]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/src' make[2]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/src' Making install in tests make[2]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[3]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[2]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg/tests' make[2]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[3]: Entering directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[2]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' make[1]: Leaving directory '/build/reproducible-path/ivar-1.4.2+dfsg' dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'ivar' in '../ivar_1.4.2+dfsg-3_i386.deb'. dpkg-deb: building package 'ivar-doc' in '../ivar-doc_1.4.2+dfsg-3_all.deb'. dpkg-deb: building package 'ivar-dbgsym' in '../ivar-dbgsym_1.4.2+dfsg-3_i386.deb'. dpkg-genbuildinfo --build=binary -O../ivar_1.4.2+dfsg-3_i386.buildinfo dpkg-genchanges --build=binary -O../ivar_1.4.2+dfsg-3_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/44940 and its subdirectories I: Current time: Sun Jun 1 03:39:59 -12 2025 I: pbuilder-time-stamp: 1748792399 Mon Apr 29 09:17:01 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos2-i386.debian.net. Mon Apr 29 09:17:01 UTC 2024 I: Preparing to do remote build '2' on ionos2-i386.debian.net. Mon Apr 29 09:21:59 UTC 2024 I: Deleting $TMPDIR on ionos2-i386.debian.net. Mon Apr 29 09:22:00 UTC 2024 I: ivar_1.4.2+dfsg-3_i386.changes: Format: 1.8 Date: Tue, 05 Dec 2023 16:07:32 +0100 Source: ivar Binary: ivar ivar-dbgsym ivar-doc Architecture: i386 all Version: 1.4.2+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: ivar - functions broadly useful for viral amplicon-based sequencing ivar-doc - functions broadly useful for viral amplicon-based sequencing (doc Closes: 1047333 Changes: ivar (1.4.2+dfsg-3) unstable; urgency=medium . * d/clean: new: clean build artifacts. (Closes: #1047333) * d/rules: remove dh_auto_clean override. Now that d/clean has an up-to-date list, the manual `rm` command is not needed anymore. Checksums-Sha1: d88e7aa654837fa4710ad90bbf358cd34503a360 1656436 ivar-dbgsym_1.4.2+dfsg-3_i386.deb 08be37268190c95fcfbd7d807517a9355b82b251 254644 ivar-doc_1.4.2+dfsg-3_all.deb 25080fe7e1c69a04c3d606a14d99e67e4d822f71 6281 ivar_1.4.2+dfsg-3_i386.buildinfo 78991e346112354086eae4388cfb0549201b0b39 238440 ivar_1.4.2+dfsg-3_i386.deb Checksums-Sha256: 181c0451b6157a91094c66ab451de3a5468fc06971dd15a26e73e50a495599ef 1656436 ivar-dbgsym_1.4.2+dfsg-3_i386.deb 4e747a78e861560c149c3d7f526291a37800bdc12e5e9f6587d09c49c21a45e6 254644 ivar-doc_1.4.2+dfsg-3_all.deb a0d3174bd3d18e26730b8036d01dd087709bbc5d9f9ea132a32eae38160f7ee1 6281 ivar_1.4.2+dfsg-3_i386.buildinfo 437f8a3b03ed76d622ed85ec726c0a9ba7755e081c13edf6954f468e7a143d09 238440 ivar_1.4.2+dfsg-3_i386.deb Files: b24d084badd8683f7a0d5b17e8b5d9aa 1656436 debug optional ivar-dbgsym_1.4.2+dfsg-3_i386.deb 11aa20934e49179f8d46abecccac0a43 254644 doc optional ivar-doc_1.4.2+dfsg-3_all.deb 906531294611b14f8d4cb8fe17cf47ee 6281 science optional ivar_1.4.2+dfsg-3_i386.buildinfo fd1b17960eefc1fd07fd37e4ab014e94 238440 science optional ivar_1.4.2+dfsg-3_i386.deb Mon Apr 29 09:22:01 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_4-19057.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.69e9dKKW/ivar_1.4.2+dfsg-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.69e9dKKW/ivar_1.4.2+dfsg-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.69e9dKKW/ivar_1.4.2+dfsg-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.69e9dKKW/b1/ivar_1.4.2+dfsg-3_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.69e9dKKW/b2/ivar_1.4.2+dfsg-3_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.355s) 0.355s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.038s) 0.038s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 690ms CPU time consumed: 687ms Mon Apr 29 09:22:02 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Mon Apr 29 09:22:02 UTC 2024 I: ivar from trixie built successfully and reproducibly on i386. Mon Apr 29 09:22:03 UTC 2024 I: Submitting .buildinfo files to external archives: Mon Apr 29 09:22:03 UTC 2024 I: Submitting 8.0K b1/ivar_1.4.2+dfsg-3_i386.buildinfo.asc Mon Apr 29 09:22:05 UTC 2024 I: Submitting 8.0K b2/ivar_1.4.2+dfsg-3_i386.buildinfo.asc Mon Apr 29 09:22:07 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Apr 29 09:22:07 UTC 2024 I: Done submitting .buildinfo files. Mon Apr 29 09:22:07 UTC 2024 I: Removing signed ivar_1.4.2+dfsg-3_i386.buildinfo.asc files: removed './b1/ivar_1.4.2+dfsg-3_i386.buildinfo.asc' removed './b2/ivar_1.4.2+dfsg-3_i386.buildinfo.asc'