Fri Jun 7 13:57:21 UTC 2024 I: starting to build uc-echo/trixie/armhf on jenkins on '2024-06-07 13:57' Fri Jun 7 13:57:21 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_18/5042/console.log Fri Jun 7 13:57:21 UTC 2024 I: Downloading source for trixie/uc-echo=1.12-19 --2024-06-07 13:57:21-- http://deb.debian.org/debian/pool/main/u/uc-echo/uc-echo_1.12-19.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2113 (2.1K) [text/prs.lines.tag] Saving to: ‘uc-echo_1.12-19.dsc’ 0K .. 100% 315M=0s 2024-06-07 13:57:21 (315 MB/s) - ‘uc-echo_1.12-19.dsc’ saved [2113/2113] Fri Jun 7 13:57:21 UTC 2024 I: uc-echo_1.12-19.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: uc-echo Binary: uc-echo Architecture: any Version: 1.12-19 Maintainer: Debian Med Packaging Team Uploaders: Thorsten Alteholz , Andreas Tille , Navid Fehrenbacher , Pierre Gruet Homepage: https://uc-echo.sourceforge.net/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/uc-echo Vcs-Git: https://salsa.debian.org/med-team/uc-echo.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3:any, python3-scipy, python3-numpy Package-List: uc-echo deb science optional arch=any Checksums-Sha1: 49dc8f1e05a1ee575d37be694f0f0077b11df13a 461450 uc-echo_1.12.orig.tar.gz 5cb4df77e4a4fe10ed353caec867383b502ad4c9 8988 uc-echo_1.12-19.debian.tar.xz Checksums-Sha256: b83c8b8acfd285ae1433b0cb3f2a88d968e0f2135cc6d6e466e5718a0fe95255 461450 uc-echo_1.12.orig.tar.gz 362866f86d4a9140d600ad529acea26cd88de21579597a0f4df5e39a6cb66864 8988 uc-echo_1.12-19.debian.tar.xz Files: 50df044b3ca154eee94af83f3fd270c7 461450 uc-echo_1.12.orig.tar.gz af92c597af57fda4b90ae840484da265 8988 uc-echo_1.12-19.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmZgWlURHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH8xQ//dIqjmO8WBbuCodHYo3U//SY3PYW9/PxI 3z+SPGIvWlZpOaICRqJPL1Iv/ttvyiiM2ThjpYzQtiDNQI+SvKdxh9JDY+U8Es1z wLW6KZxHrrHUpS+h+U4Tbjh9x4LUNE3mTQiIwDxYQ/iz0d2OWKT6lsBGaLbm9GZ+ LUmGody542xK4++vCYFYfuj3bC4lcpZaJc0AkXZKwV/vQmoCKQ/ifZ1VKJehTVpW fhpMrBgOq+Lb2mtEtRWJEkoKb2+LJXNRg7NiZFa/8B3Yl0MsHSBMiSbHHfoL3CUq DZVYlN7kUdGGC/OFJvi1+jTjGqkas31J0Q5giGajxajvFyeKsOdv+LsnWY7gXQl2 lm9zAi5l99dWVfMp3tr2sw3HiCZ5huqSLXoxuWxXEld7yDFw7ygTruSJnR54thqt E7VpLf6r816w1ZQpvLYUCzlLW1/EKy4ydeicHD5sUbXEISMZ9Ojcr04fQOrVDbf1 Qv6jSTO5BKRRdes1ZdcGOb0wRYZjDdJPOdrjbscnO6rtMFwe1p34iLG3/py3B8E1 khGT1vovudG52vnI2jdJFF8L6p/Ozamonu5pD8iexNJjYzpzx6wlMPKz2R7OXUjK xgJcChD8oBehKINOYMvIoaP0SvuiQAAeKlA17u7l/03JdAIdkWn97Q8LR3J4Bgj3 hNbdNdLrJek= =ets4 -----END PGP SIGNATURE----- Fri Jun 7 13:57:21 UTC 2024 I: Checking whether the package is not for us Fri Jun 7 13:57:21 UTC 2024 I: Starting 1st build on remote node ff64a-armhf-rb.debian.net. Fri Jun 7 13:57:21 UTC 2024 I: Preparing to do remote build '1' on ff64a-armhf-rb.debian.net. Fri Jun 7 14:05:16 UTC 2024 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jun 7 01:57:32 -12 2024 I: pbuilder-time-stamp: 1717768652 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [uc-echo_1.12-19.dsc] I: copying [./uc-echo_1.12.orig.tar.gz] I: copying [./uc-echo_1.12-19.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Jun 5 12:30:13 2024 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./uc-echo_1.12-19.dsc: no acceptable signature found dpkg-source: info: extracting uc-echo in uc-echo-1.12 dpkg-source: info: unpacking uc-echo_1.12.orig.tar.gz dpkg-source: info: unpacking uc-echo_1.12-19.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening-flags.patch dpkg-source: info: applying include.patch dpkg-source: info: applying m64-flag.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying using_int_not_char.patch dpkg-source: info: applying scipy_1.12.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/10834/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=5 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='5263dc4d7eda44b5ba90bbed2007012c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='10834' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.NGgrx36I/pbuilderrc_XBkm --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.NGgrx36I/b1 --logfile b1/build.log uc-echo_1.12-19.dsc' SUDO_GID='114' SUDO_UID='109' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux ff64a 6.1.0-21-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 6 11:26 /bin -> usr/bin I: user script /srv/workspace/pbuilder/10834/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3:any, python3-scipy, python3-numpy dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19446 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3:any. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} liblapack3{a} liblbfgsb0{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-decorator{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pkg-resources{a} python3-scipy{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-pil wget 0 packages upgraded, 54 newly installed, 0 to remove and 0 not upgraded. Need to get 48.0 MB of archives. After unpacking 197 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.11-minimal armhf 3.11.9-1 [805 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.11-minimal armhf 3.11.9-1 [1600 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-4 [145 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libpython3.11-stdlib armhf 3.11.9-1 [1704 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf python3.11 armhf 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-4 [1090 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.1-8 [87.7 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 35 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 68.1.2-2 [241 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf python3-lib2to3 all 3.12.3-3.1 [77.7 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf python3-distutils all 3.12.3-3.1 [131 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf python3-setuptools all 68.1.2-2 [468 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf dh-python all 6.20240422 [107 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libblas3 armhf 3.12.0-3 [108 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14-20240330-1 [264 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf liblapack3 armhf 3.12.0-3 [1803 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1+b1 [25.5 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf python3-decorator all 5.1.1-5 [15.1 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf python3-numpy armhf 1:1.26.4+ds-10 [4132 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf python3-scipy armhf 1.11.4-10 [16.9 MB] Fetched 48.0 MB in 3s (18.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19446 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_armhf.deb ... Unpacking libpython3.11-minimal:armhf (3.11.9-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.2-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_armhf.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:armhf (3.11.9-1) ... Setting up libexpat1:armhf (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19762 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_armhf.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../5-libreadline8t64_8.2-4_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:armhf. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_armhf.deb ... Unpacking libpython3.11-stdlib:armhf (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_armhf.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20754 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.8-1_armhf.deb ... Unpacking python3 (3.11.8-1) ... 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Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Jun 7 14:00:26 UTC 2024. Universal Time is now: Fri Jun 7 14:00:26 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libblas3:armhf (3.12.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up autopoint (0.21-14) ... Setting up libgfortran5:armhf (14-20240330-1) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up netbase (6.4) ... Setting up readline-common (8.2-4) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/uc-echo-1.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../uc-echo_1.12-19_source.changes dpkg-buildpackage: info: source package uc-echo dpkg-buildpackage: info: source version 1.12-19 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j5 clean make[1]: Entering directory '/build/reproducible-path/uc-echo-1.12' rm -f DNASeq.o NeighborSet.o KmerHashMap.o hashing NeighborJoin NeighborJoinParam NeighborMerge Voting HashMerge make[1]: Leaving directory '/build/reproducible-path/uc-echo-1.12' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/uc-echo-1.12' echo "I: DEB_HOST_ARCH: armhf" I: DEB_HOST_ARCH: armhf echo "I: ADDCXXFLAGS: " I: ADDCXXFLAGS: echo "I: CXXFLAGS: -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security " I: CXXFLAGS: -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security dh_auto_build make -j5 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/uc-echo-1.12' g++ -c -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 DNASeq.cpp -o DNASeq.o g++ -c -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 NeighborSet.cpp -o NeighborSet.o g++ -c -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 KmerHashMap.cpp -o KmerHashMap.o g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o hashing hashing.cpp DNASeq.o NeighborSet.o KmerHashMap.o g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o NeighborJoin NeighborJoin.cpp DNASeq.o NeighborSet.o KmerHashMap.o g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o NeighborJoinParam NeighborJoinParam.cpp DNASeq.o NeighborSet.o KmerHashMap.o g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o NeighborMerge NeighborMerge.cpp DNASeq.o NeighborSet.o KmerHashMap.o g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o Voting Voting.cpp DNASeq.o NeighborSet.o KmerHashMap.o In file included from NeighborMerge.cpp:16: NeighborSet.hpp: In member function 'void NeighborSetLoader::load(unsigned int, unsigned int)': NeighborSet.hpp:163:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 163 | fread(&numNeighbors, sizeof(unsigned int), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:169:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 169 | fread(&neighborId, sizeof(unsigned int), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:171:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 171 | fread(&offset, sizeof(NeighborInfo::index_t), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:173:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 173 | fread(&nerr, sizeof(NeighborInfo::index_t), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from Voting.cpp:19: NeighborSet.hpp: In member function 'void NeighborSetLoader::load(unsigned int, unsigned int)': NeighborSet.hpp:163:18: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 163 | fread(&numNeighbors, sizeof(unsigned int), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:169:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 169 | fread(&neighborId, sizeof(unsigned int), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:171:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 171 | fread(&offset, sizeof(NeighborInfo::index_t), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NeighborSet.hpp:173:22: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 173 | fread(&nerr, sizeof(NeighborInfo::index_t), 1, NeighborFile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/uc-echo-1.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o HashMerge HashMerge.cpp DNASeq.o NeighborSet.o KmerHashMap.o In file included from /usr/include/c++/13/vector:72, from Voting.cpp:2: /usr/include/c++/13/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {VoteInfo}; _Tp = VoteInfo; _Alloc = std::allocator]': /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {VoteInfo}; _Tp = VoteInfo; _Alloc = std::allocator]', inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = VoteInfo; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, inlined from 'int main(int, char**)' at Voting.cpp:203:48: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {VoteInfo}; _Tp = VoteInfo; _Alloc = std::allocator]', inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = VoteInfo; _Alloc = std::allocator]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, inlined from 'int main(int, char**)' at Voting.cpp:210:56: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/build/reproducible-path/uc-echo-1.12' make[1]: Leaving directory '/build/reproducible-path/uc-echo-1.12' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/uc-echo-1.12' dh_auto_install dh_installchangelogs README make[1]: Leaving directory '/build/reproducible-path/uc-echo-1.12' dh_install dh_installdocs dh_installchangelogs dh_installman dh_python3 dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/uc-echo-1.12' dh_fixperms chmod +x debian/*/usr/lib/*/*.py make[1]: Leaving directory '/build/reproducible-path/uc-echo-1.12' dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/uc-echo/usr/lib/uc-echo/NeighborMerge contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/uc-echo/usr/lib/uc-echo/hashing contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/uc-echo/usr/lib/uc-echo/Voting contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/uc-echo/usr/lib/uc-echo/NeighborJoinParam contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/uc-echo/usr/lib/uc-echo/HashMerge contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/uc-echo/usr/lib/uc-echo/NeighborJoin contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'uc-echo-dbgsym' in '../uc-echo-dbgsym_1.12-19_armhf.deb'. dpkg-deb: building package 'uc-echo' in '../uc-echo_1.12-19_armhf.deb'. dpkg-genbuildinfo --build=binary -O../uc-echo_1.12-19_armhf.buildinfo dpkg-genchanges --build=binary -O../uc-echo_1.12-19_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/10834 and its subdirectories I: Current time: Fri Jun 7 02:05:09 -12 2024 I: pbuilder-time-stamp: 1717769109 Fri Jun 7 14:05:19 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt32a-armhf-rb.debian.net. Fri Jun 7 14:05:19 UTC 2024 I: Preparing to do remote build '2' on virt32a-armhf-rb.debian.net. Fri Jun 7 14:11:30 UTC 2024 I: Deleting $TMPDIR on virt32a-armhf-rb.debian.net. Fri Jun 7 14:11:32 UTC 2024 I: uc-echo_1.12-19_armhf.changes: Format: 1.8 Date: Wed, 05 Jun 2024 13:48:16 +0200 Source: uc-echo Binary: uc-echo uc-echo-dbgsym Architecture: armhf Version: 1.12-19 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: uc-echo - error correction algorithm designed for short-reads from NGS Closes: 1071704 Changes: uc-echo (1.12-19) unstable; urgency=medium . * Standards-Version: 4.7.0 (routine-update) * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update) * Do not try to import floor / ceil from scipy Closes: #1071704 Checksums-Sha1: 6f1078432962f697f50527e701e1b0a5fa919f22 940528 uc-echo-dbgsym_1.12-19_armhf.deb 382e448317e041ce53b1c73198d62e3ed53eb7e2 5646 uc-echo_1.12-19_armhf.buildinfo 1e7b6d95273cdffc7d1b201dfcf179ef8f6579cc 69528 uc-echo_1.12-19_armhf.deb Checksums-Sha256: 1ef6b70fa297cf727699bf57ac91cc6a7813ace76fde1e3bb903912d97319d29 940528 uc-echo-dbgsym_1.12-19_armhf.deb 49d74876499da01945ba32222e9650b343a8eede6b5055c88c9238856b497b8d 5646 uc-echo_1.12-19_armhf.buildinfo fccf55c584caefc609866e57f8c5a32a4dbaeda829bc5a20b6583ab661aea5dd 69528 uc-echo_1.12-19_armhf.deb Files: d992b3f7633bc4340d225954b4353ed7 940528 debug optional uc-echo-dbgsym_1.12-19_armhf.deb 5c22c9ce9e89236cdb6e11051d25fa2b 5646 science optional uc-echo_1.12-19_armhf.buildinfo c601f35d4a01171001b9accd517ac329 69528 science optional uc-echo_1.12-19_armhf.deb Fri Jun 7 14:11:33 UTC 2024 I: diffoscope 270 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_18-5042.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.NGgrx36I/uc-echo_1.12-19.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.NGgrx36I/uc-echo_1.12-19.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.NGgrx36I/uc-echo_1.12-19.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.NGgrx36I/b1/uc-echo_1.12-19_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.NGgrx36I/b2/uc-echo_1.12-19_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.371s) 0.371s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.030s) 0.030s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 703ms CPU time consumed: 703ms Fri Jun 7 14:11:34 UTC 2024 I: diffoscope 270 found no differences in the changes files, and a .buildinfo file also exists. Fri Jun 7 14:11:34 UTC 2024 I: uc-echo from trixie built successfully and reproducibly on armhf. Fri Jun 7 14:11:36 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Jun 7 14:11:36 UTC 2024 I: Submitting 8.0K b1/uc-echo_1.12-19_armhf.buildinfo.asc Fri Jun 7 14:11:37 UTC 2024 I: Submitting 8.0K b2/uc-echo_1.12-19_armhf.buildinfo.asc Fri Jun 7 14:11:38 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Jun 7 14:11:38 UTC 2024 I: Done submitting .buildinfo files. Fri Jun 7 14:11:38 UTC 2024 I: Removing signed uc-echo_1.12-19_armhf.buildinfo.asc files: removed './b1/uc-echo_1.12-19_armhf.buildinfo.asc' removed './b2/uc-echo_1.12-19_armhf.buildinfo.asc'