Sun Oct 13 10:24:49 UTC 2024 I: starting to build sprai/trixie/armhf on jenkins on '2024-10-13 10:24' Sun Oct 13 10:24:49 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_31/7160/console.log Sun Oct 13 10:24:49 UTC 2024 I: Downloading source for trixie/sprai=0.9.9.23+dfsg1-3 --2024-10-13 10:24:49-- http://deb.debian.org/debian/pool/main/s/sprai/sprai_0.9.9.23%2bdfsg1-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2184 (2.1K) [text/prs.lines.tag] Saving to: ‘sprai_0.9.9.23+dfsg1-3.dsc’ 0K .. 100% 323M=0s 2024-10-13 10:24:49 (323 MB/s) - ‘sprai_0.9.9.23+dfsg1-3.dsc’ saved [2184/2184] Sun Oct 13 10:24:49 UTC 2024 I: sprai_0.9.9.23+dfsg1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: sprai Binary: sprai Architecture: any Version: 0.9.9.23+dfsg1-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://web.archive.org/web/20180316202959/http://zombie.cb.k.u-tokyo.ac.jp/sprai/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/sprai Vcs-Git: https://salsa.debian.org/med-team/sprai.git Build-Depends: debhelper-compat (= 13) Package-List: sprai deb science optional arch=any Checksums-Sha1: 4c0617d846c40ce0c8e75238e85cd8268dae100f 60428 sprai_0.9.9.23+dfsg1.orig.tar.xz b348a782451fb41a56004b8169731a5948e96ccd 1446952 sprai_0.9.9.23+dfsg1-3.debian.tar.xz Checksums-Sha256: b7190784e07c803e465a07b4b3a0ba086b8c82c93878c4e252e8c715d20d22c2 60428 sprai_0.9.9.23+dfsg1.orig.tar.xz d45516177d79a7e4110a542affd51376fbb56e88862a5f54e7e02d6e29358e5d 1446952 sprai_0.9.9.23+dfsg1-3.debian.tar.xz Files: 91389cbe7e99874c959933859e76d7bb 60428 sprai_0.9.9.23+dfsg1.orig.tar.xz aa6eb84ab483da9517a1c0d35d734004 1446952 sprai_0.9.9.23+dfsg1-3.debian.tar.xz Dgit: aa333095bd67900d4df8989ea094d9288aad7abb debian archive/debian/0.9.9.23+dfsg1-3 https://git.dgit.debian.org/sprai -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmbPhWUUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdqoLw/+PqfUk7J+EXvZY7DPymtbKenzZF8m qrzyHNglzCSnGTQmQO0al0G7wnCApIMeAssx7aIyviSgBxHVY6YQJi/qm/v5F5QC /lndYAzsdZdU1Axd3youLxGmCCDjRjXf3l22pR/yjbMWEMvCV9vMV9ZkCHnYGf0F AZ+y43iP3pi3QMGtdi89SF81KhR/Yo0d0/ooT7bBe2EHT4ozboOkwfw2YmGESh3M mRI/sWrzORKRhcy0EKFSaZ9xti/jhik74BQJAPIrtVf+vWF5zNbzRm6guEtXvRyq H3T9PkHwQUhx0fizmg0m8yXS1cZW3fV4vCFBum+YH+z5A6XSij1yM8tCwA07ASQg cl0TQhnT/l09lLGllSQgi26zSuGMvHInYqZ1wxiGGbxYm0jMW7xYIHfEuLwQAeaL 6lqMssJ9tsJOxi5PYS+4yMATpaB/HCoHNoGQ/e3K2OjYQ+pMdz2+X7ZlpPVfrDkL WZNSu21edwNq6hhBSzfERfe6NY2wMpkytB+cTt5Lt5aMVTBweqqTrJtOx+klUiZT XJhxMlAl7X6tdaqx38qO1g4wwe4NpDgiYliCI8TL9Y/BFQCni0CzSMq0/WSpTELn i5PHPVx1GdYmOhkWUoit6ouQNQnASMIXHWt1xrWdhb7vkASB4aTMEEXTlgPj/vLT isNPB+WMR3YFj+k= =kgDy -----END PGP SIGNATURE----- Sun Oct 13 10:24:49 UTC 2024 I: Checking whether the package is not for us Sun Oct 13 10:24:49 UTC 2024 I: Starting 1st build on remote node virt64c-armhf-rb.debian.net. Sun Oct 13 10:24:49 UTC 2024 I: Preparing to do remote build '1' on virt64c-armhf-rb.debian.net. Sun Oct 13 10:26:35 UTC 2024 I: Deleting $TMPDIR on virt64c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Oct 12 22:25:07 -12 2024 I: pbuilder-time-stamp: 1728815107 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [sprai_0.9.9.23+dfsg1-3.dsc] I: copying [./sprai_0.9.9.23+dfsg1.orig.tar.xz] I: copying [./sprai_0.9.9.23+dfsg1-3.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Aug 28 20:15:33 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./sprai_0.9.9.23+dfsg1-3.dsc: no acceptable signature found dpkg-source: info: extracting sprai in sprai-0.9.9.23+dfsg1 dpkg-source: info: unpacking sprai_0.9.9.23+dfsg1.orig.tar.xz dpkg-source: info: unpacking sprai_0.9.9.23+dfsg1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying libexec.patch dpkg-source: info: applying example-specs.patch dpkg-source: info: applying makefile.patch dpkg-source: info: applying no-pwd.patch dpkg-source: info: applying flags.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/18318/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='930dbea1eedd498788420705afb1a77d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='18318' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.z0StFBIm/pbuilderrc_kYws --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.z0StFBIm/b1 --logfile b1/build.log sprai_0.9.9.23+dfsg1-3.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64c 6.1.0-26-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/18318/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19508 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 19.1 MB of archives. After unpacking 70.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-9 [88.8 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-2 [183 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5 [9075 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.1 [604 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB] Fetched 19.1 MB in 1s (31.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19508 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_armhf.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_armhf.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-9_armhf.deb ... Unpacking bsdextrautils (2.40.2-9) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.8-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_armhf.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../21-libelf1t64_0.191-2_armhf.deb ... Unpacking libelf1t64:armhf (0.191-2) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../23-libicu72_72.1-5_armhf.deb ... Unpacking libicu72:armhf (72.1-5) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.1_armhf.deb ... Unpacking libxml2:armhf (2.12.7+dfsg+really2.9.14-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_armhf.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Setting up libpipeline1:armhf (1.5.8-1) ... Setting up libicu72:armhf (72.1-5) ... Setting up bsdextrautils (2.40.2-9) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:armhf (0.191-2) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/sprai-0.9.9.23+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../sprai_0.9.9.23+dfsg1-3_source.changes dpkg-buildpackage: info: source package sprai dpkg-buildpackage: info: source version 0.9.9.23+dfsg1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem=makefile dh_auto_clean -O--buildsystem=makefile dh_autoreconf_clean -O--buildsystem=makefile dh_clean -O--buildsystem=makefile debian/rules binary dh binary --buildsystem=makefile dh_update_autotools_config -O--buildsystem=makefile dh_autoreconf -O--buildsystem=makefile dh_auto_configure -O--buildsystem=makefile dh_auto_build -O--buildsystem=makefile make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' cc -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sprai-0.9.9.23+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o bfmt72s bfmt72s.c cc -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sprai-0.9.9.23+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o nss2v_v3 nss2v_v3.c cc -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sprai-0.9.9.23+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o myrealigner myrealigner.c bfmt72s.c: In function 'main': bfmt72s.c:444:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 444 | fgets(buf+line_length, LBUF + 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nss2v_v3.c: In function 'get_sam_record': nss2v_v3.c:471:7: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 471 | fgets(buf+line_length, buffer_size + 1, in_sam); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cc -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/sprai-0.9.9.23+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o m52bfmt7 m52bfmt7.c make[1]: Leaving directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' dh_auto_test -O--buildsystem=makefile create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=makefile dh_prep -O--buildsystem=makefile dh_auto_install --destdir=debian/sprai/ -O--buildsystem=makefile make -j3 install DESTDIR=/build/reproducible-path/sprai-0.9.9.23\+dfsg1/debian/sprai AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' chmod 766 bfmt72s nss2v_v3 myrealigner m52bfmt7 ca_ikki_v5.pl ezez4makefile_v4.pl ezez4qsub_vx1.pl ezez_vx1.pl dumbbell_filter.pl fa2fq.pl fq2fa.pl fq2idfq.pl fqfilt.pl get_top_20x_fa.pl partition_fa.pl get_target_fasta_records.pl dfq2fq_v2.pl extract_fq.pl bfmtx2m4.pl check_redundancy.pl check_circularity.pl mkdir -vp /build/reproducible-path/sprai-0.9.9.23+dfsg1/debian/sprai/usr/bin/ mkdir: created directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1/debian/sprai/usr' mkdir: created directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1/debian/sprai/usr/bin/' cp -p bfmt72s nss2v_v3 myrealigner m52bfmt7 ca_ikki_v5.pl ezez4makefile_v4.pl ezez4qsub_vx1.pl ezez_vx1.pl dumbbell_filter.pl fa2fq.pl fq2fa.pl fq2idfq.pl fqfilt.pl get_top_20x_fa.pl partition_fa.pl get_target_fasta_records.pl dfq2fq_v2.pl extract_fq.pl bfmtx2m4.pl check_redundancy.pl check_circularity.pl /build/reproducible-path/sprai-0.9.9.23+dfsg1/debian/sprai/usr/bin/ make[1]: Leaving directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' mkdir -p /build/reproducible-path/sprai-0.9.9.23+dfsg1/debian/sprai/usr/lib/sprai cd /build/reproducible-path/sprai-0.9.9.23+dfsg1/debian/sprai/usr/bin \ && mv * ../lib/sprai/ \ && mv ../lib/sprai/ezez* . cd /build/reproducible-path/sprai-0.9.9.23+dfsg1/debian/sprai/usr/bin \ && \ for script in *; \ do \ mv $script $(basename $script .pl) \ && ln -sf $(basename $script .pl) $script; \ done dh_install for pl in `grep -Rl '#![[:space:]]*/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#![[:space:]]*/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' dh_installdocs -O--buildsystem=makefile debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' dh_installchangelogs doc/_build/html/_sources/index.txt make[1]: Leaving directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' dh_installexamples -O--buildsystem=makefile debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/sprai-0.9.9.23+dfsg1' dh_installsystemduser -O--buildsystem=makefile dh_perl -O--buildsystem=makefile dh_link -O--buildsystem=makefile dh_strip_nondeterminism -O--buildsystem=makefile dh_compress -O--buildsystem=makefile dh_fixperms -O--buildsystem=makefile dh_missing -O--buildsystem=makefile dh_dwz -a -O--buildsystem=makefile dh_strip -a -O--buildsystem=makefile dh_makeshlibs -a -O--buildsystem=makefile dh_shlibdeps -a -O--buildsystem=makefile dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb -O--buildsystem=makefile dh_gencontrol -O--buildsystem=makefile dh_md5sums -O--buildsystem=makefile dh_builddeb -O--buildsystem=makefile dpkg-deb: building package 'sprai' in '../sprai_0.9.9.23+dfsg1-3_armhf.deb'. dpkg-deb: building package 'sprai-dbgsym' in '../sprai-dbgsym_0.9.9.23+dfsg1-3_armhf.deb'. dpkg-genbuildinfo --build=binary -O../sprai_0.9.9.23+dfsg1-3_armhf.buildinfo dpkg-genchanges --build=binary -O../sprai_0.9.9.23+dfsg1-3_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/18318 and its subdirectories I: Current time: Sat Oct 12 22:26:21 -12 2024 I: pbuilder-time-stamp: 1728815181 Sun Oct 13 10:26:38 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ff4a-armhf-rb.debian.net. Sun Oct 13 10:26:38 UTC 2024 I: Preparing to do remote build '2' on ff4a-armhf-rb.debian.net. Sun Oct 13 10:28:26 UTC 2024 I: Deleting $TMPDIR on ff4a-armhf-rb.debian.net. Sun Oct 13 10:28:30 UTC 2024 I: sprai_0.9.9.23+dfsg1-3_armhf.changes: Format: 1.8 Date: Wed, 28 Aug 2024 21:31:44 +0200 Source: sprai Binary: sprai sprai-dbgsym Architecture: armhf Version: 0.9.9.23+dfsg1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: sprai - single-pass sequencing read accuracy improver Closes: 1047125 Changes: sprai (0.9.9.23+dfsg1-3) unstable; urgency=medium . * d/clean: new: fix double source build failure. (Closes: #1047125) * d/rules: activate hardwning flags. * flags.patch: propagate hardening flags to package targets. The patch is renamed from cflags.patch for naming consistency. * d/s/lintian-overrides: hide more unactionable hints. * d/control: bump to debhelper-compat 13. * d/control: declare compliance to standards version 4.7.0. * d/control: add myself to uploaders. Checksums-Sha1: 787dbd47da06c45b61d63a02f4d3a41fe678ed74 70112 sprai-dbgsym_0.9.9.23+dfsg1-3_armhf.deb 6b21f1b14944e9844ac3629f6c59c92df856dcae 4789 sprai_0.9.9.23+dfsg1-3_armhf.buildinfo 86f95a6a20507d38a774f53989cea42bd096cdae 1506956 sprai_0.9.9.23+dfsg1-3_armhf.deb Checksums-Sha256: 0d4cfb54fe76cbd0a0cc6c5f9c27d70d76339790f0cfff9e87ce2cd7f4d01ffd 70112 sprai-dbgsym_0.9.9.23+dfsg1-3_armhf.deb 35f3487ee0791b1224465c905e790b70ebab9d5a42660e595b5b3c606d87c8b2 4789 sprai_0.9.9.23+dfsg1-3_armhf.buildinfo f9ea259798f2f178c0a915b1360fec18dba55ce813531257daecabf90cbd0933 1506956 sprai_0.9.9.23+dfsg1-3_armhf.deb Files: a6b42086aad33cab5ac73c42ff57d293 70112 debug optional sprai-dbgsym_0.9.9.23+dfsg1-3_armhf.deb ac7a04049185244725928954df07f787 4789 science optional sprai_0.9.9.23+dfsg1-3_armhf.buildinfo db9865aaab053c77c13cd94a6856ff6e 1506956 science optional sprai_0.9.9.23+dfsg1-3_armhf.deb Sun Oct 13 10:28:31 UTC 2024 I: diffoscope 280 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_31-7160.service Warning: program compiled against libxml 212 using older 209 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.z0StFBIm/sprai_0.9.9.23+dfsg1-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.z0StFBIm/sprai_0.9.9.23+dfsg1-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.z0StFBIm/sprai_0.9.9.23+dfsg1-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.z0StFBIm/b1/sprai_0.9.9.23+dfsg1-3_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.z0StFBIm/b2/sprai_0.9.9.23+dfsg1-3_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.413s) 0.413s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.034s) 0.034s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 759ms CPU time consumed: 754ms Sun Oct 13 10:28:32 UTC 2024 I: diffoscope 280 found no differences in the changes files, and a .buildinfo file also exists. Sun Oct 13 10:28:32 UTC 2024 I: sprai from trixie built successfully and reproducibly on armhf. Sun Oct 13 10:28:34 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Oct 13 10:28:34 UTC 2024 I: Submitting 8.0K b1/sprai_0.9.9.23+dfsg1-3_armhf.buildinfo.asc Sun Oct 13 10:28:49 UTC 2024 I: Submitting 8.0K b2/sprai_0.9.9.23+dfsg1-3_armhf.buildinfo.asc Sun Oct 13 10:28:59 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Oct 13 10:28:59 UTC 2024 I: Done submitting .buildinfo files. Sun Oct 13 10:28:59 UTC 2024 I: Removing signed sprai_0.9.9.23+dfsg1-3_armhf.buildinfo.asc files: removed './b1/sprai_0.9.9.23+dfsg1-3_armhf.buildinfo.asc' removed './b2/sprai_0.9.9.23+dfsg1-3_armhf.buildinfo.asc'