Tue Apr 30 08:29:33 UTC 2024 I: starting to build samblaster/trixie/armhf on jenkins on '2024-04-30 08:29' Tue Apr 30 08:29:33 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_14/3717/console.log Tue Apr 30 08:29:33 UTC 2024 I: Downloading source for trixie/samblaster=0.1.26-4 --2024-04-30 08:29:34-- http://deb.debian.org/debian/pool/main/s/samblaster/samblaster_0.1.26-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2029 (2.0K) [text/prs.lines.tag] Saving to: ‘samblaster_0.1.26-4.dsc’ 0K . 100% 288M=0s 2024-04-30 08:29:34 (288 MB/s) - ‘samblaster_0.1.26-4.dsc’ saved [2029/2029] Tue Apr 30 08:29:34 UTC 2024 I: samblaster_0.1.26-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: samblaster Binary: samblaster Architecture: any Version: 0.1.26-4 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/GregoryFaust/samblaster Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/samblaster Vcs-Git: https://salsa.debian.org/med-team/samblaster.git Testsuite: autopkgtest Testsuite-Triggers: samtools Build-Depends: debhelper-compat (= 13) Package-List: samblaster deb science optional arch=any Checksums-Sha1: 039ab74d623cac6954525859d53685b3273e1183 133321 samblaster_0.1.26.orig.tar.gz da25e3c8d3bacc974c2b880a78ccf73656a1bd7e 5256 samblaster_0.1.26-4.debian.tar.xz Checksums-Sha256: 6b42a53d64a3ed340852028546693a24c860f236fd70e90c2b24fde9dcc4fd63 133321 samblaster_0.1.26.orig.tar.gz 578c6b4a77d40bd8fa9b85d9b73142cdaff35d62bef890bf603572d6e545c12a 5256 samblaster_0.1.26-4.debian.tar.xz Files: 314b0df5c942db1bb2df91bc23a813b9 133321 samblaster_0.1.26.orig.tar.gz dd6d2508463802690916a9a2c9401164 5256 samblaster_0.1.26-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmOPU5YRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFuKw/8C3NzS4iwyKJKmJLUU+G2xpxYgxIbN3Hb fm8LQB5UVs4G9dS2tLTB4sfQz356GDX5tYliIUHG9h6BWBzCspABHGCP8ljbqG0o EiPpzOJpiiW9YqZ0RWBdNspbd2QhfLozX2c2KV+UfXN2EcMZfPcC1Cv9tzDKvSu9 7SOTupgn0dlfDfb7EskLbqOeGMX1mwBMb5ayjy3qy9JPXpXIH4ovLVmium0rLoaq msJ0lloT1hb2z+ZT9QgITYmbRn4HdLXhBdsvRvM+F7ONSJSrN77eH9wizbj0fjY4 /k7dwW/JUVCww6lx5ePexU8DT6gqjtK3XsGrFdXR9E8LRyb5XXtwBE4V0WBgAw/z je8aKZOZaen6mtX1z4NHTpr9+zN9ALJIRGUmIQ58d2YhLzRTXG1kDuzNab3fzVGW DsG4ELsX3QDv9s3AWN5yPvwy1/UePM3R2NJIBwbMB+mypm+Vy0Fq3vq1dk4+oY32 GCCRKWduTVwLBkOt0Ny5H1v86ut8OovIdGWuawPVbmHcimCclBn03nX+QxboER1W PdM0yk8OISdC5SpGwnxfjafHv2ISSYqsv6XHkp9j4qX5p8vbwISzLJF/1PkjjLiA 2sqTad7wHaGCpj9y8lrA0KG7QcZDRAL/lBCe6RO9CRuxwGoYNzZQry50FdlL115R Sox33zMdJ6M= =Xj41 -----END PGP SIGNATURE----- Tue Apr 30 08:29:34 UTC 2024 I: Checking whether the package is not for us Tue Apr 30 08:29:34 UTC 2024 I: Starting 1st build on remote node virt32z-armhf-rb.debian.net. Tue Apr 30 08:29:34 UTC 2024 I: Preparing to do remote build '1' on virt32z-armhf-rb.debian.net. Tue Apr 30 08:30:50 UTC 2024 I: Deleting $TMPDIR on virt32z-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Apr 29 20:29:40 -12 2024 I: pbuilder-time-stamp: 1714465780 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [samblaster_0.1.26-4.dsc] I: copying [./samblaster_0.1.26.orig.tar.gz] I: copying [./samblaster_0.1.26-4.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Dec 6 14:37:10 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./samblaster_0.1.26-4.dsc: no acceptable signature found dpkg-source: info: extracting samblaster in samblaster-0.1.26 dpkg-source: info: unpacking samblaster_0.1.26.orig.tar.gz dpkg-source: info: unpacking samblaster_0.1.26-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Makefile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/18833/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='630b59c5000744588557f9f65b2a0a2e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='18833' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JBs44cg4/pbuilderrc_zbyv --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JBs44cg4/b1 --logfile b1/build.log samblaster_0.1.26-4.dsc' SUDO_GID='110' SUDO_UID='103' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32z 6.1.0-20-armmp-lpae #1 SMP Debian 6.1.85-1 (2024-04-11) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 28 11:24 /bin -> usr/bin I: user script /srv/workspace/pbuilder/18833/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19470 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 18.4 MB of archives. After unpacking 68.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-3 [1088 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.39.3-6 [81.2 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.0-3 [1367 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Fetched 18.4 MB in 0s (39.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19470 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-3_armhf.deb ... Unpacking groff-base (1.23.0-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.39.3-6_armhf.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.0-3_armhf.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../22-libelf1t64_0.191-1+b1_armhf.deb ... Unpacking libelf1t64:armhf (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../24-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.3+b3_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-14+b1_armhf.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Setting up libpipeline1:armhf (1.5.7-2) ... Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.37-18) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/samblaster-0.1.26/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../samblaster_0.1.26-4_source.changes dpkg-buildpackage: info: source package samblaster dpkg-buildpackage: info: source version 0.1.26-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/reproducible-path/samblaster-0.1.26' rm -f samblaster *.o *.co *.linkinfo make[1]: Leaving directory '/build/reproducible-path/samblaster-0.1.26' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/samblaster.substvars debian/files rm -fr -- debian/samblaster/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/samblaster-0.1.26' g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -D BUILDNUM=26 -g -O2 -ffile-prefix-map=/build/reproducible-path/samblaster-0.1.26=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c samblaster.cpp -o samblaster.o g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -D BUILDNUM=26 -g -O2 -ffile-prefix-map=/build/reproducible-path/samblaster-0.1.26=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c sbhash.cpp -o sbhash.o samblaster.cpp: In function 'void brokenBlock(splitLine_t*, int)': samblaster.cpp:889:13: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 889 | asprintf(&temp, "samblaster: Can't find first and/or second of pair in sam block of length %d for id: %s\n%s%s:%s\n%s", | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 | count, block->fields[QNAME], "samblaster: At location: ", block->fields[RNAME], block->fields[POS], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 | "samblaster: Are you sure the input is sorted by read ids?"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ samblaster.cpp: In function 'void prepareSigValues(splitLine_t*, state_t*, bool)': samblaster.cpp:951:21: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 951 | asprintf(&temp, "samblaster: Calculated read position falls outside the reference for read id: %s\n" | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 952 | "samblaster: Consider rerunning with higher --maxReadLength.\n", line->fields[QNAME]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ samblaster.cpp: In function 'int getSeqNum(splitLine_t*, int, state_t*)': samblaster.cpp:719:17: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 719 | asprintf(&temp, "samblaster: Unable to find sequence '%s' in sequence map for readid %s\n", line->fields[field], line->fields[QNAME]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ samblaster.cpp: In function 'void fsError(const char*)': samblaster.cpp:1567:17: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 1567 | asprintf(&temp, "samblaster: File '%s' does not exist.\n", filename); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ samblaster.cpp:1569:17: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 1569 | asprintf(&temp, "samblaster: File system error on %s: %d.\n", filename, errno); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ samblaster.cpp: In function 'int getIntVal(int, int, char**)': samblaster.cpp:1582:17: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 1582 | asprintf(&temp, "samblaster: Missing value for option %s\n", argv[argi-1]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ samblaster.cpp:1588:17: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 1588 | asprintf(&temp, "samblaster: Invalid integer value '%s' for option %s\n", argv[argi], argv[argi-1]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ samblaster.cpp: In function 'char* getStrVal(int, int, char**)': samblaster.cpp:1599:17: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 1599 | asprintf(&temp, "samblaster: Missing value for option %s\n", argv[argi-1]); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ samblaster.cpp: In function 'int main(int, char**)': samblaster.cpp:1727:17: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 1727 | asprintf(&temp, "samblaster: Invalid minimum non overlap parameter given: %d\n", state->minNonOverlap); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ samblaster.cpp:1733:17: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 1733 | asprintf(&temp, "samblaster: Invalid maximum split count parameter given: %d\n", state->maxSplitCount); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sbhash.cpp: In function 'void checkFSerrWithFilename(ssize_t)': sbhash.cpp:45:21: warning: ignoring return value of 'int asprintf(char**, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 45 | asprintf(&temp, "File system error %d trying to allocate or free memory\n", errno); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -D BUILDNUM=26 -g -O2 -ffile-prefix-map=/build/reproducible-path/samblaster-0.1.26=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -o samblaster samblaster.o sbhash.o -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/build/reproducible-path/samblaster-0.1.26' dh_auto_test rm -fr -- /tmp/dh-xdg-rundir-8nGY_9PZ create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/samblaster.substvars rm -fr -- debian/.debhelper/generated/samblaster/ debian/samblaster/ debian/tmp/ dh_auto_install --destdir=debian/samblaster/ install -m0755 -d /build/reproducible-path/samblaster-0.1.26/debian/samblaster dh_install install -m0755 -d debian/samblaster/usr/bin cp --reflink=auto -a ./samblaster debian/samblaster/usr/bin/ dh_installdocs install -m0755 -d debian/samblaster/usr/share/doc/samblaster install -m0755 -d debian/samblaster/usr/share/doc/samblaster cp --reflink=auto -a ./README.md debian/samblaster/usr/share/doc/samblaster chmod -R u\+rw,go=rX debian/samblaster/usr/share/doc install -p -m0644 debian/copyright debian/samblaster/usr/share/doc/samblaster/copyright dh_installchangelogs install -m0755 -d debian/samblaster/usr/share/doc/samblaster install -p -m0644 debian/.debhelper/generated/samblaster/dh_installchangelogs.dch.trimmed debian/samblaster/usr/share/doc/samblaster/changelog.Debian dh_installman install -m0755 -d debian/samblaster/usr/share/man/man1/ install -p -m0644 ./debian/samblaster.1 debian/samblaster/usr/share/man/man1/samblaster.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samblaster/usr/share/man/man1/samblaster.1 mv debian/samblaster/usr/share/man/man1/samblaster.1.dh-new debian/samblaster/usr/share/man/man1/samblaster.1 chmod 0644 -- debian/samblaster/usr/share/man/man1/samblaster.1 dh_perl dh_link dh_strip_nondeterminism dh_compress cd debian/samblaster chmod a-x usr/share/doc/samblaster/README.md usr/share/doc/samblaster/changelog.Debian usr/share/man/man1/samblaster.1 gzip -9nf usr/share/doc/samblaster/README.md usr/share/doc/samblaster/changelog.Debian usr/share/man/man1/samblaster.1 cd '/build/reproducible-path/samblaster-0.1.26' dh_fixperms find debian/samblaster ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/samblaster/usr/share/doc -type f -a -true -a ! -regex 'debian/samblaster/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samblaster/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/samblaster/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samblaster -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samblaster/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_dwz -a dwz -- debian/samblaster/usr/bin/samblaster dh_strip -a install -m0755 -d debian/.debhelper/samblaster/dbgsym-root/usr/lib/debug/.build-id/d3 objcopy --only-keep-debug --compress-debug-sections debian/samblaster/usr/bin/samblaster debian/.debhelper/samblaster/dbgsym-root/usr/lib/debug/.build-id/d3/c4645445ce05c4b337b52f88404dd96d677304.debug chmod 0644 -- debian/.debhelper/samblaster/dbgsym-root/usr/lib/debug/.build-id/d3/c4645445ce05c4b337b52f88404dd96d677304.debug strip --remove-section=.comment --remove-section=.note debian/samblaster/usr/bin/samblaster objcopy --add-gnu-debuglink debian/.debhelper/samblaster/dbgsym-root/usr/lib/debug/.build-id/d3/c4645445ce05c4b337b52f88404dd96d677304.debug debian/samblaster/usr/bin/samblaster install -m0755 -d debian/.debhelper/samblaster/dbgsym-root/usr/share/doc ln -s samblaster debian/.debhelper/samblaster/dbgsym-root/usr/share/doc/samblaster-dbgsym install -m0755 -d debian/.debhelper/samblaster dh_makeshlibs -a rm -f debian/samblaster/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/samblaster/DEBIAN dpkg-shlibdeps -Tdebian/samblaster.substvars debian/samblaster/usr/bin/samblaster dh_installdeb install -m0755 -d debian/samblaster/DEBIAN dh_gencontrol install -m0755 -d debian/samblaster/DEBIAN echo misc:Depends= >> debian/samblaster.substvars echo misc:Pre-Depends= >> debian/samblaster.substvars install -m0755 -d debian/.debhelper/samblaster/dbgsym-root/DEBIAN dpkg-gencontrol -psamblaster -ldebian/changelog -Tdebian/samblaster.substvars -cdebian/control -Pdebian/.debhelper/samblaster/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=samblaster-dbgsym "-DDepends=samblaster (= \${binary:Version})" "-DDescription=debug symbols for samblaster" -DBuild-Ids=d3c4645445ce05c4b337b52f88404dd96d677304 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/samblaster/dbgsym-root/DEBIAN/control dpkg-gencontrol -psamblaster -ldebian/changelog -Tdebian/samblaster.substvars -cdebian/control -Pdebian/samblaster chmod 0644 -- debian/samblaster/DEBIAN/control dh_md5sums install -m0755 -d debian/samblaster/DEBIAN cd debian/samblaster >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/samblaster/DEBIAN/md5sums install -m0755 -d debian/.debhelper/samblaster/dbgsym-root/DEBIAN cd debian/.debhelper/samblaster/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/samblaster/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/samblaster .. dpkg-deb --root-owner-group --build debian/.debhelper/samblaster/dbgsym-root .. dpkg-deb: building package 'samblaster' in '../samblaster_0.1.26-4_armhf.deb'. dpkg-deb: building package 'samblaster-dbgsym' in '../samblaster-dbgsym_0.1.26-4_armhf.deb'. dpkg-genbuildinfo --build=binary -O../samblaster_0.1.26-4_armhf.buildinfo dpkg-genchanges --build=binary -O../samblaster_0.1.26-4_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/18833 and its subdirectories I: Current time: Mon Apr 29 20:30:46 -12 2024 I: pbuilder-time-stamp: 1714465846 Tue Apr 30 08:30:53 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ff64a-armhf-rb.debian.net. Tue Apr 30 08:30:53 UTC 2024 I: Preparing to do remote build '2' on ff64a-armhf-rb.debian.net. Tue Apr 30 08:34:38 UTC 2024 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. Tue Apr 30 08:34:41 UTC 2024 I: samblaster_0.1.26-4_armhf.changes: Format: 1.8 Date: Tue, 06 Dec 2022 15:33:46 +0100 Source: samblaster Binary: samblaster samblaster-dbgsym Architecture: armhf Version: 0.1.26-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: samblaster - marks duplicates, extracts discordant/split reads Changes: samblaster (0.1.26-4) unstable; urgency=medium . * Team upload. * Fix watch file * Standards-Version: 4.6.1 (routine-update) * Set upstream metadata fields: Repository-Browse. Checksums-Sha1: a087512ab4958c1d4884ea08b955991fd71bdc36 72720 samblaster-dbgsym_0.1.26-4_armhf.deb d0bde3aa79bd36eedd59587280d7a6a823535d54 4998 samblaster_0.1.26-4_armhf.buildinfo 450eae63e5205f6f745a80787e8f4c3129941e5c 23616 samblaster_0.1.26-4_armhf.deb Checksums-Sha256: ceeb7b1348d9a10848dfe675f9536803581b3061494be9303466146cfb22db92 72720 samblaster-dbgsym_0.1.26-4_armhf.deb 3fd2f592ea1338d97febc4967881f109c9eb76ae7b59b7db67d2ac31dd85f676 4998 samblaster_0.1.26-4_armhf.buildinfo a3e51dd1053f91d6a32ec9ad7f89c68e9f1bc26e456c6bff6286aa1583cb41f6 23616 samblaster_0.1.26-4_armhf.deb Files: 06d4e67bf05b60482a0de237b0a7e8c3 72720 debug optional samblaster-dbgsym_0.1.26-4_armhf.deb ca40612b250f799b953dd85d90bac006 4998 science optional samblaster_0.1.26-4_armhf.buildinfo cf215c982cd1dfab8a0228ae710992f0 23616 science optional samblaster_0.1.26-4_armhf.deb Tue Apr 30 08:34:43 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_14-3717.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.JBs44cg4/samblaster_0.1.26-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.JBs44cg4/samblaster_0.1.26-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.JBs44cg4/samblaster_0.1.26-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.JBs44cg4/b1/samblaster_0.1.26-4_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.JBs44cg4/b2/samblaster_0.1.26-4_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.699s) 0.699s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.019s) 0.019s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1.147s CPU time consumed: 1.009s Tue Apr 30 08:34:45 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Tue Apr 30 08:34:45 UTC 2024 I: samblaster from trixie built successfully and reproducibly on armhf. Tue Apr 30 08:34:46 UTC 2024 I: Submitting .buildinfo files to external archives: Tue Apr 30 08:34:46 UTC 2024 I: Submitting 8.0K b1/samblaster_0.1.26-4_armhf.buildinfo.asc Tue Apr 30 08:34:47 UTC 2024 I: Submitting 8.0K b2/samblaster_0.1.26-4_armhf.buildinfo.asc Tue Apr 30 08:34:49 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Apr 30 08:34:49 UTC 2024 I: Done submitting .buildinfo files. Tue Apr 30 08:34:49 UTC 2024 I: Removing signed samblaster_0.1.26-4_armhf.buildinfo.asc files: removed './b1/samblaster_0.1.26-4_armhf.buildinfo.asc' removed './b2/samblaster_0.1.26-4_armhf.buildinfo.asc'