Tue Oct 15 11:12:06 UTC 2024  I: starting to build r-bioc-biocstyle/trixie/armhf on jenkins on '2024-10-15 11:11'
Tue Oct 15 11:12:06 UTC 2024  I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_7/4544/console.log
Tue Oct 15 11:12:06 UTC 2024  I: Downloading source for trixie/r-bioc-biocstyle=2.32.1+dfsg-1
--2024-10-15 11:12:06--  http://deb.debian.org/debian/pool/main/r/r-bioc-biocstyle/r-bioc-biocstyle_2.32.1%2bdfsg-1.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2219 (2.2K) [text/prs.lines.tag]
Saving to: ‘r-bioc-biocstyle_2.32.1+dfsg-1.dsc’

     0K ..                                                    100%  298M=0s

2024-10-15 11:12:06 (298 MB/s) - ‘r-bioc-biocstyle_2.32.1+dfsg-1.dsc’ saved [2219/2219]

Tue Oct 15 11:12:06 UTC 2024  I: r-bioc-biocstyle_2.32.1+dfsg-1.dsc
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Hash: SHA512

Format: 3.0 (quilt)
Source: r-bioc-biocstyle
Binary: r-bioc-biocstyle
Architecture: all
Version: 2.32.1+dfsg-1
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://bioconductor.org/packages/BiocStyle/
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-biocstyle
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-biocstyle.git
Testsuite: autopkgtest-pkg-r
Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-bookdown, r-cran-knitr, r-cran-rmarkdown, r-cran-yaml, r-cran-biocmanager, xdg-utils, r-bioc-biocversion (>= 3.19.1)
Package-List:
 r-bioc-biocstyle deb gnu-r optional arch=all
Checksums-Sha1:
 c7cde6449e14d15e8418d4e9dee857c6b954fc10 366892 r-bioc-biocstyle_2.32.1+dfsg.orig.tar.xz
 0c12662821fc1b00bad9ab53681798ce2a195cf0 5932 r-bioc-biocstyle_2.32.1+dfsg-1.debian.tar.xz
Checksums-Sha256:
 4c97be2c87d924b026dcfd143ce88b94f7d85b225d76c587e0696473b83033da 366892 r-bioc-biocstyle_2.32.1+dfsg.orig.tar.xz
 17643437be3eda49c11bec9ff817afdf92d06918c2031d0cc75bf2684f6a94a3 5932 r-bioc-biocstyle_2.32.1+dfsg-1.debian.tar.xz
Files:
 afd482b4dfbccb5418afdef507a2594c 366892 r-bioc-biocstyle_2.32.1+dfsg.orig.tar.xz
 390e90ddfbe97cef782f4da36b21774d 5932 r-bioc-biocstyle_2.32.1+dfsg-1.debian.tar.xz

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Tue Oct 15 11:12:06 UTC 2024  I: Checking whether the package is not for us
Tue Oct 15 11:12:06 UTC 2024  I: Starting 1st build on remote node virt64b-armhf-rb.debian.net.
Tue Oct 15 11:12:06 UTC 2024  I: Preparing to do remote build '1' on virt64b-armhf-rb.debian.net.
Tue Oct 15 11:21:59 UTC 2024  I: Deleting $TMPDIR on virt64b-armhf-rb.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Mon Oct 14 23:12:18 -12 2024
I: pbuilder-time-stamp: 1728990738
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [r-bioc-biocstyle_2.32.1+dfsg-1.dsc]
I: copying [./r-bioc-biocstyle_2.32.1+dfsg.orig.tar.xz]
I: copying [./r-bioc-biocstyle_2.32.1+dfsg-1.debian.tar.xz]
I: Extracting source
gpgv: Signature made Fri Aug 16 11:24:16 2024 
gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./r-bioc-biocstyle_2.32.1+dfsg-1.dsc: no acceptable signature found
dpkg-source: info: extracting r-bioc-biocstyle in r-bioc-biocstyle-2.32.1+dfsg
dpkg-source: info: unpacking r-bioc-biocstyle_2.32.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking r-bioc-biocstyle_2.32.1+dfsg-1.debian.tar.xz
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/2736/tmp/hooks/D02_print_environment starting
I: set
  BUILDDIR='/build/reproducible-path'
  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
  BUILDUSERNAME='pbuilder1'
  BUILD_ARCH='armhf'
  DEBIAN_FRONTEND='noninteractive'
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 '
  DISTRIBUTION='trixie'
  HOME='/root'
  HOST_ARCH='armhf'
  IFS=' 	
  '
  INVOCATION_ID='ae349cf81adf47ce9b1752c17e1be5bd'
  LANG='C'
  LANGUAGE='en_US:en'
  LC_ALL='C'
  MAIL='/var/mail/root'
  OPTIND='1'
  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
  PBCURRENTCOMMANDLINEOPERATION='build'
  PBUILDER_OPERATION='build'
  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
  PBUILDER_SYSCONFDIR='/etc'
  PPID='2736'
  PS1='# '
  PS2='> '
  PS4='+ '
  PWD='/'
  SHELL='/bin/bash'
  SHLVL='2'
  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.y5rlDB2w/pbuilderrc_6ats --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.y5rlDB2w/b1 --logfile b1/build.log r-bioc-biocstyle_2.32.1+dfsg-1.dsc'
  SUDO_GID='113'
  SUDO_UID='107'
  SUDO_USER='jenkins'
  TERM='unknown'
  TZ='/usr/share/zoneinfo/Etc/GMT+12'
  USER='root'
  _='/usr/bin/systemd-run'
  http_proxy='http://10.0.0.15:3142/'
I: uname -a
  Linux virt64b 6.1.0-26-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux
I: ls -l /bin
  lrwxrwxrwx 1 root root 7 Aug  4 21:30 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/2736/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armhf
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-bookdown, r-cran-knitr, r-cran-rmarkdown, r-cran-yaml, r-cran-biocmanager, xdg-utils, r-bioc-biocversion (>= 3.19.1)
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19508 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on dh-r; however:
  Package dh-r is not installed.
 pbuilder-satisfydepends-dummy depends on r-base-dev; however:
  Package r-base-dev is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-bookdown; however:
  Package r-cran-bookdown is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-knitr; however:
  Package r-cran-knitr is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-rmarkdown; however:
  Package r-cran-rmarkdown is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-yaml; however:
  Package r-cran-yaml is not installed.
 pbuilder-satisfydepends-dummy depends on r-cran-biocmanager; however:
  Package r-cran-biocmanager is not installed.
 pbuilder-satisfydepends-dummy depends on xdg-utils; however:
  Package xdg-utils is not installed.
 pbuilder-satisfydepends-dummy depends on r-bioc-biocversion (>= 3.19.1); however:
  Package r-bioc-biocversion is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-arm-linux-gnueabihf{a} gfortran-arm-linux-gnueabihf{a} groff-base{a} icu-devtools{a} intltool-debian{a} javascript-common{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-bootstrap{a} libjs-bootstrap4{a} libjs-d3{a} libjs-es5-shim{a} libjs-highlight.js{a} libjs-jquery{a} libjs-jquery-datatables{a} libjs-jquery-selectize.js{a} libjs-jquery-ui{a} libjs-json{a} libjs-lunr{a} libjs-mathjax{a} libjs-microplugin.js{a} libjs-modernizr{a} libjs-popper.js{a} libjs-prettify{a} libjs-sifter.js{a} libjs-twitter-bootstrap-datepicker{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblua5.4-0{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libuv1t64{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} littler{a} m4{a} man-db{a} node-bootstrap-sass{a} node-html5shiv{a} node-normalize.css{a} openssl{a} pandoc{a} pandoc-data{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} r-base-core{a} r-base-dev{a} r-bioc-biocgenerics{a} r-bioc-biocversion{a} r-cran-base64enc{a} r-cran-biocmanager{a} r-cran-bookdown{a} r-cran-bslib{a} r-cran-cachem{a} r-cran-cli{a} r-cran-commonmark{a} r-cran-crayon{a} r-cran-digest{a} r-cran-evaluate{a} r-cran-fastmap{a} r-cran-fontawesome{a} r-cran-fs{a} r-cran-glue{a} r-cran-highr{a} r-cran-htmltools{a} r-cran-httpuv{a} r-cran-jquerylib{a} r-cran-jsonlite{a} r-cran-knitr{a} r-cran-later{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-memoise{a} r-cran-mime{a} r-cran-pkgkitten{a} r-cran-promises{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcpp{a} r-cran-rlang{a} r-cran-rmarkdown{a} r-cran-sass{a} r-cran-shiny{a} r-cran-sourcetools{a} r-cran-tinytex{a} r-cran-withr{a} r-cran-xfun{a} r-cran-xtable{a} r-cran-yaml{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  bzip2-doc cme curl devscripts git-buildpackage krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl lynx node-highlight.js node-jquery publicsuffix r-bioc-biocstyle r-cran-cairo r-cran-callr r-cran-codetools r-cran-covr r-cran-curl r-cran-dbi r-cran-downlit r-cran-dplyr r-cran-dt r-cran-dygraphs r-cran-formatr r-cran-future r-cran-ggplot2 r-cran-gridsvg r-cran-htmlwidgets r-cran-httr r-cran-jpeg r-cran-lattice r-cran-lintr r-cran-magick r-cran-markdown r-cran-miniui r-cran-mockery r-cran-pillar r-cran-png r-cran-processx r-cran-ps r-cran-purrr r-cran-r.rsp r-cran-ragg r-cran-remotes r-cran-renv r-cran-reticulate r-cran-rgl r-cran-rprojroot r-cran-rsconnect r-cran-rsqlite r-cran-rstudioapi r-cran-rsvg r-cran-runit r-cran-spelling r-cran-svglite r-cran-testit r-cran-testthat r-cran-thematic r-cran-tibble r-cran-tidyverse r-cran-tikzdevice r-cran-tufte r-cran-usethis r-cran-vctrs r-cran-waldo r-cran-webshot r-cran-whoami r-cran-xml2 r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 
0 packages upgraded, 259 newly installed, 0 to remove and 0 not upgraded.
Need to get 157 MB of archives. After unpacking 597 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian trixie/main armhf tzdata all 2024a-4 [255 kB]
Get: 2 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-5 [69.3 kB]
Get: 3 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB]
Get: 4 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.3.2-1 [1348 kB]
Get: 5 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB]
Get: 6 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB]
Get: 7 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB]
Get: 8 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB]
Get: 9 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-2 [195 kB]
Get: 10 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB]
Get: 11 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-5 [1091 kB]
Get: 12 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-9 [88.8 kB]
Get: 13 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB]
Get: 14 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB]
Get: 15 http://deb.debian.org/debian trixie/main armhf ucf all 3.0043+nmu1 [55.2 kB]
Get: 16 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB]
Get: 17 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB]
Get: 18 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get: 19 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get: 20 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-2 [723 kB]
Get: 21 http://deb.debian.org/debian trixie/main armhf dctrl-tools armhf 2.24-3 [96.0 kB]
Get: 22 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.20 [89.7 kB]
Get: 23 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB]
Get: 24 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB]
Get: 25 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get: 26 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB]
Get: 27 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B]
Get: 28 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-2 [183 kB]
Get: 29 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB]
Get: 30 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5 [9075 kB]
Get: 31 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.1 [604 kB]
Get: 32 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-2 [1485 kB]
Get: 33 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 34 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get: 35 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB]
Get: 36 http://deb.debian.org/debian trixie/main armhf zip armhf 3.0-14 [221 kB]
Get: 37 http://deb.debian.org/debian trixie/main armhf unzip armhf 6.0-28 [152 kB]
Get: 38 http://deb.debian.org/debian trixie/main armhf libpaper1 armhf 1.1.29+b1 [12.2 kB]
Get: 39 http://deb.debian.org/debian trixie/main armhf libpaper-utils armhf 1.1.29+b1 [8700 B]
Get: 40 http://deb.debian.org/debian trixie/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB]
Get: 41 http://deb.debian.org/debian trixie/main armhf libblas3 armhf 3.12.0-3 [108 kB]
Get: 42 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.3-1 [83.2 kB]
Get: 43 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b4 [293 kB]
Get: 44 http://deb.debian.org/debian trixie/main armhf libpng16-16t64 armhf 1.6.44-2 [263 kB]
Get: 45 http://deb.debian.org/debian trixie/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB]
Get: 46 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 47 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB]
Get: 48 http://deb.debian.org/debian trixie/main armhf fontconfig-config armhf 2.15.0-1.1 [317 kB]
Get: 49 http://deb.debian.org/debian trixie/main armhf libfontconfig1 armhf 2.15.0-1.1 [370 kB]
Get: 50 http://deb.debian.org/debian trixie/main armhf libpixman-1-0 armhf 0.42.2-1+b1 [476 kB]
Get: 51 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.9-1+b1 [17.4 kB]
Get: 52 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.2-3+b1 [23.0 kB]
Get: 53 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.17.0-2 [140 kB]
Get: 54 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.7-1 [328 kB]
Get: 55 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.7-1+b1 [739 kB]
Get: 56 http://deb.debian.org/debian trixie/main armhf libxcb-render0 armhf 1.17.0-2 [114 kB]
Get: 57 http://deb.debian.org/debian trixie/main armhf libxcb-shm0 armhf 1.17.0-2 [105 kB]
Get: 58 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b2 [45.2 kB]
Get: 59 http://deb.debian.org/debian trixie/main armhf libxrender1 armhf 1:0.9.10-1.1+b1 [24.9 kB]
Get: 60 http://deb.debian.org/debian trixie/main armhf libcairo2 armhf 1.18.2-2 [443 kB]
Get: 61 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB]
Get: 62 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.1-1 [22.1 kB]
Get: 63 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB]
Get: 64 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-3 [7908 B]
Get: 65 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB]
Get: 66 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB]
Get: 67 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8 [18.2 kB]
Get: 68 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8 [50.2 kB]
Get: 69 http://deb.debian.org/debian trixie/main armhf libldap-2.5-0 armhf 2.5.18+dfsg-3 [163 kB]
Get: 70 http://deb.debian.org/debian trixie/main armhf libnghttp2-14 armhf 1.63.0-1 [62.9 kB]
Get: 71 http://deb.debian.org/debian trixie/main armhf libpsl5t64 armhf 0.21.2-1.1 [55.6 kB]
Get: 72 http://deb.debian.org/debian trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b4 [53.2 kB]
Get: 73 http://deb.debian.org/debian trixie/main armhf libssh2-1t64 armhf 1.11.0-7 [199 kB]
Get: 74 http://deb.debian.org/debian trixie/main armhf libcurl4t64 armhf 8.10.1-2 [303 kB]
Get: 75 http://deb.debian.org/debian trixie/main armhf libdeflate0 armhf 1.22-1 [36.3 kB]
Get: 76 http://deb.debian.org/debian trixie/main armhf libglib2.0-0t64 armhf 2.82.1-1 [1325 kB]
Get: 77 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-3 [143 kB]
Get: 78 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14.2.0-6 [263 kB]
Get: 79 http://deb.debian.org/debian trixie/main armhf liblapack3 armhf 3.12.0-3 [1803 kB]
Get: 80 http://deb.debian.org/debian trixie/main armhf fontconfig armhf 2.15.0-1.1 [461 kB]
Get: 81 http://deb.debian.org/debian trixie/main armhf libfribidi0 armhf 1.0.15-1 [70.0 kB]
Get: 82 http://deb.debian.org/debian trixie/main armhf libgraphite2-3 armhf 1.3.14-2 [63.2 kB]
Get: 83 http://deb.debian.org/debian trixie/main armhf libharfbuzz0b armhf 9.0.0-1 [417 kB]
Get: 84 http://deb.debian.org/debian trixie/main armhf libthai-data all 0.1.29-2 [168 kB]
Get: 85 http://deb.debian.org/debian trixie/main armhf libdatrie1 armhf 0.2.13-3 [34.4 kB]
Get: 86 http://deb.debian.org/debian trixie/main armhf libthai0 armhf 0.1.29-2 [45.8 kB]
Get: 87 http://deb.debian.org/debian trixie/main armhf libpango-1.0-0 armhf 1.54.0+ds-2 [198 kB]
Get: 88 http://deb.debian.org/debian trixie/main armhf libpangoft2-1.0-0 armhf 1.54.0+ds-2 [47.5 kB]
Get: 89 http://deb.debian.org/debian trixie/main armhf libpangocairo-1.0-0 armhf 1.54.0+ds-2 [31.1 kB]
Get: 90 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-5 [146 kB]
Get: 91 http://deb.debian.org/debian trixie/main armhf libtcl8.6 armhf 8.6.15+dfsg-2 [934 kB]
Get: 92 http://deb.debian.org/debian trixie/main armhf libjbig0 armhf 2.1-6.1+b1 [27.3 kB]
Get: 93 http://deb.debian.org/debian trixie/main armhf liblerc4 armhf 4.0.0+ds-4+b1 [137 kB]
Get: 94 http://deb.debian.org/debian trixie/main armhf libsharpyuv0 armhf 1.4.0-0.1 [111 kB]
Get: 95 http://deb.debian.org/debian trixie/main armhf libwebp7 armhf 1.4.0-0.1 [265 kB]
Get: 96 http://deb.debian.org/debian trixie/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB]
Get: 97 http://deb.debian.org/debian trixie/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB]
Get: 98 http://deb.debian.org/debian trixie/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3 [71.1 kB]
Get: 99 http://deb.debian.org/debian trixie/main armhf libxft2 armhf 2.3.6-1+b1 [46.4 kB]
Get: 100 http://deb.debian.org/debian trixie/main armhf x11-common all 1:7.7+23.1 [216 kB]
Get: 101 http://deb.debian.org/debian trixie/main armhf libxss1 armhf 1:1.2.3-1+b1 [16.4 kB]
Get: 102 http://deb.debian.org/debian trixie/main armhf libtk8.6 armhf 8.6.15-1 [697 kB]
Get: 103 http://deb.debian.org/debian trixie/main armhf libice6 armhf 2:1.0.10-1+b1 [50.1 kB]
Get: 104 http://deb.debian.org/debian trixie/main armhf libsm6 armhf 2:1.2.3-1+b1 [31.7 kB]
Get: 105 http://deb.debian.org/debian trixie/main armhf libxt6t64 armhf 1:1.2.1-1.2 [159 kB]
Get: 106 http://deb.debian.org/debian trixie/main armhf r-base-core armhf 4.4.1-3 [28.0 MB]
Get: 107 http://deb.debian.org/debian trixie/main armhf libgfortran-14-dev armhf 14.2.0-6 [315 kB]
Get: 108 http://deb.debian.org/debian trixie/main armhf gfortran-14-arm-linux-gnueabihf armhf 14.2.0-6 [8718 kB]
Get: 109 http://deb.debian.org/debian trixie/main armhf gfortran-14 armhf 14.2.0-6 [11.9 kB]
Get: 110 http://deb.debian.org/debian trixie/main armhf gfortran-arm-linux-gnueabihf armhf 4:14.2.0-1 [1288 B]
Get: 111 http://deb.debian.org/debian trixie/main armhf gfortran armhf 4:14.2.0-1 [1428 B]
Get: 112 http://deb.debian.org/debian trixie/main armhf libblas-dev armhf 3.12.0-3 [119 kB]
Get: 113 http://deb.debian.org/debian trixie/main armhf liblapack-dev armhf 3.12.0-3 [1903 kB]
Get: 114 http://deb.debian.org/debian trixie/main armhf libncurses6 armhf 6.5-2 [81.8 kB]
Get: 115 http://deb.debian.org/debian trixie/main armhf libncurses-dev armhf 6.5-2 [309 kB]
Get: 116 http://deb.debian.org/debian trixie/main armhf libreadline-dev armhf 8.2-5 [138 kB]
Get: 117 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo-dev armhf 1:2.1.5-3 [260 kB]
Get: 118 http://deb.debian.org/debian trixie/main armhf libjpeg-dev armhf 1:2.1.5-3 [71.9 kB]
Get: 119 http://deb.debian.org/debian trixie/main armhf libpcre2-16-0 armhf 10.42-4+b1 [212 kB]
Get: 120 http://deb.debian.org/debian trixie/main armhf libpcre2-32-0 armhf 10.42-4+b1 [203 kB]
Get: 121 http://deb.debian.org/debian trixie/main armhf libpcre2-posix3 armhf 10.42-4+b1 [55.3 kB]
Get: 122 http://deb.debian.org/debian trixie/main armhf libpcre2-dev armhf 10.42-4+b1 [668 kB]
Get: 123 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1 [904 kB]
Get: 124 http://deb.debian.org/debian trixie/main armhf libpng-dev armhf 1.6.44-2 [349 kB]
Get: 125 http://deb.debian.org/debian trixie/main armhf libbz2-dev armhf 1.0.8-6 [28.7 kB]
Get: 126 http://deb.debian.org/debian trixie/main armhf liblzma-dev armhf 5.6.2-2 [288 kB]
Get: 127 http://deb.debian.org/debian trixie/main armhf icu-devtools armhf 72.1-5 [185 kB]
Get: 128 http://deb.debian.org/debian trixie/main armhf libicu-dev armhf 72.1-5 [10.1 MB]
Get: 129 http://deb.debian.org/debian trixie/main armhf libxmuu1 armhf 2:1.1.3-3+b2 [21.2 kB]
Get: 130 http://deb.debian.org/debian trixie/main armhf xauth armhf 1:1.1.2-1 [33.2 kB]
Get: 131 http://deb.debian.org/debian trixie/main armhf libpkgconf3 armhf 1.8.1-3 [31.7 kB]
Get: 132 http://deb.debian.org/debian trixie/main armhf pkgconf-bin armhf 1.8.1-3 [29.1 kB]
Get: 133 http://deb.debian.org/debian trixie/main armhf pkgconf armhf 1.8.1-3 [26.1 kB]
Get: 134 http://deb.debian.org/debian trixie/main armhf libtirpc-dev armhf 1.3.4+ds-1.3 [180 kB]
Get: 135 http://deb.debian.org/debian trixie/main armhf libdeflate-dev armhf 1.22-1 [44.5 kB]
Get: 136 http://deb.debian.org/debian trixie/main armhf r-base-dev all 4.4.1-3 [4512 B]
Get: 137 http://deb.debian.org/debian trixie/main armhf libfile-which-perl all 1.27-2 [15.1 kB]
Get: 138 http://deb.debian.org/debian trixie/main armhf libswitch-perl all 2.17-3 [20.3 kB]
Get: 139 http://deb.debian.org/debian trixie/main armhf libclone-perl armhf 0.47-1 [13.0 kB]
Get: 140 http://deb.debian.org/debian trixie/main armhf libencode-locale-perl all 1.05-3 [12.9 kB]
Get: 141 http://deb.debian.org/debian trixie/main armhf libtimedate-perl all 2.3300-2 [39.3 kB]
Get: 142 http://deb.debian.org/debian trixie/main armhf libhttp-date-perl all 6.06-1 [10.7 kB]
Get: 143 http://deb.debian.org/debian trixie/main armhf libio-html-perl all 1.004-3 [16.2 kB]
Get: 144 http://deb.debian.org/debian trixie/main armhf liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get: 145 http://deb.debian.org/debian trixie/main armhf liburi-perl all 5.30-1 [105 kB]
Get: 146 http://deb.debian.org/debian trixie/main armhf libhttp-message-perl all 7.00-2 [79.8 kB]
Get: 147 http://deb.debian.org/debian trixie/main armhf libparams-util-perl armhf 1.102-3 [23.0 kB]
Get: 148 http://deb.debian.org/debian trixie/main armhf libsub-install-perl all 0.929-1 [10.5 kB]
Get: 149 http://deb.debian.org/debian trixie/main armhf libdata-optlist-perl all 0.114-1 [10.6 kB]
Get: 150 http://deb.debian.org/debian trixie/main armhf libb-hooks-op-check-perl armhf 0.22-3+b1 [10.2 kB]
Get: 151 http://deb.debian.org/debian trixie/main armhf libdynaloader-functions-perl all 0.004-1 [12.1 kB]
Get: 152 http://deb.debian.org/debian trixie/main armhf libdevel-callchecker-perl armhf 0.009-1 [15.7 kB]
Get: 153 http://deb.debian.org/debian trixie/main armhf libparams-classify-perl armhf 0.015-2+b3 [21.3 kB]
Get: 154 http://deb.debian.org/debian trixie/main armhf libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get: 155 http://deb.debian.org/debian trixie/main armhf libtry-tiny-perl all 0.32-1 [22.9 kB]
Get: 156 http://deb.debian.org/debian trixie/main armhf libmodule-implementation-perl all 0.09-2 [12.6 kB]
Get: 157 http://deb.debian.org/debian trixie/main armhf libpackage-stash-perl all 0.40-1 [22.0 kB]
Get: 158 http://deb.debian.org/debian trixie/main armhf libclass-load-perl all 0.25-2 [15.3 kB]
Get: 159 http://deb.debian.org/debian trixie/main armhf libclass-load-xs-perl armhf 0.10-2+b3 [13.8 kB]
Get: 160 http://deb.debian.org/debian trixie/main armhf libsub-exporter-progressive-perl all 0.001013-3 [7496 B]
Get: 161 http://deb.debian.org/debian trixie/main armhf libdevel-globaldestruction-perl all 0.14-4 [7144 B]
Get: 162 http://deb.debian.org/debian trixie/main armhf libalgorithm-c3-perl all 0.11-2 [10.8 kB]
Get: 163 http://deb.debian.org/debian trixie/main armhf libclass-c3-perl all 0.35-2 [21.0 kB]
Get: 164 http://deb.debian.org/debian trixie/main armhf libmro-compat-perl all 0.15-2 [11.8 kB]
Get: 165 http://deb.debian.org/debian trixie/main armhf libdevel-overloadinfo-perl all 0.007-1 [7896 B]
Get: 166 http://deb.debian.org/debian trixie/main armhf libdevel-stacktrace-perl all 2.0500-1 [26.4 kB]
Get: 167 http://deb.debian.org/debian trixie/main armhf libsub-exporter-perl all 0.990-1 [50.6 kB]
Get: 168 http://deb.debian.org/debian trixie/main armhf libeval-closure-perl all 0.14-3 [11.2 kB]
Get: 169 http://deb.debian.org/debian trixie/main armhf libdist-checkconflicts-perl all 0.11-2 [10.5 kB]
Get: 170 http://deb.debian.org/debian trixie/main armhf libmodule-runtime-conflicts-perl all 0.003-2 [7356 B]
Get: 171 http://deb.debian.org/debian trixie/main armhf libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB]
Get: 172 http://deb.debian.org/debian trixie/main armhf libpackage-stash-xs-perl armhf 0.30-1+b3 [18.4 kB]
Get: 173 http://deb.debian.org/debian trixie/main armhf libmoose-perl armhf 2.2207-1+b1 [766 kB]
Get: 174 http://deb.debian.org/debian trixie/main armhf libvariable-magic-perl armhf 0.64-1 [42.2 kB]
Get: 175 http://deb.debian.org/debian trixie/main armhf libb-hooks-endofscope-perl all 0.28-1 [17.5 kB]
Get: 176 http://deb.debian.org/debian trixie/main armhf libsub-identify-perl armhf 0.14-3+b2 [10.8 kB]
Get: 177 http://deb.debian.org/debian trixie/main armhf libsub-name-perl armhf 0.27-1+b2 [12.0 kB]
Get: 178 http://deb.debian.org/debian trixie/main armhf libnamespace-clean-perl all 0.27-2 [17.8 kB]
Get: 179 http://deb.debian.org/debian trixie/main armhf libnghttp3-9 armhf 1.4.0-1 [55.1 kB]
Get: 180 http://deb.debian.org/debian trixie/main armhf libngtcp2-16 armhf 1.6.0-1 [118 kB]
Get: 181 http://deb.debian.org/debian trixie/main armhf libngtcp2-crypto-gnutls8 armhf 1.6.0-1 [17.1 kB]
Get: 182 http://deb.debian.org/debian trixie/main armhf libcurl3t64-gnutls armhf 8.10.1-2 [308 kB]
Get: 183 http://deb.debian.org/debian trixie/main armhf libwww-curl-perl armhf 4.17-10+b2 [56.1 kB]
Get: 184 http://deb.debian.org/debian trixie/main armhf libwww-curl-simple-perl all 0.100191-3 [12.6 kB]
Get: 185 http://deb.debian.org/debian trixie/main armhf dh-r all 20231212 [42.2 kB]
Get: 186 http://deb.debian.org/debian trixie/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB]
Get: 187 http://deb.debian.org/debian trixie/main armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB]
Get: 188 http://deb.debian.org/debian trixie/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2210 kB]
Get: 189 http://deb.debian.org/debian trixie/main armhf javascript-common all 11+nmu1 [6260 B]
Get: 190 http://deb.debian.org/debian trixie/main armhf libjs-bootstrap all 3.4.1+dfsg-3 [172 kB]
Get: 191 http://deb.debian.org/debian trixie/main armhf libjs-popper.js all 1.16.1+ds-6 [52.4 kB]
Get: 192 http://deb.debian.org/debian trixie/main armhf libjs-bootstrap4 all 4.6.1+dfsg1-4 [517 kB]
Get: 193 http://deb.debian.org/debian trixie/main armhf libjs-d3 all 3.5.17-4 [132 kB]
Get: 194 http://deb.debian.org/debian trixie/main armhf libjs-es5-shim all 4.6.7-2 [47.4 kB]
Get: 195 http://deb.debian.org/debian trixie/main armhf libjs-highlight.js all 9.18.5+dfsg1-2 [397 kB]
Get: 196 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 197 http://deb.debian.org/debian trixie/main armhf libjs-jquery-datatables all 1.11.5+dfsg-2 [144 kB]
Get: 198 http://deb.debian.org/debian trixie/main armhf libjs-sifter.js all 0.6.0+dfsg-3 [12.2 kB]
Get: 199 http://deb.debian.org/debian trixie/main armhf libjs-microplugin.js all 0.0.3+dfsg-1.1 [3672 B]
Get: 200 http://deb.debian.org/debian trixie/main armhf libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [52.1 kB]
Get: 201 http://deb.debian.org/debian trixie/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 202 http://deb.debian.org/debian trixie/main armhf libjs-json all 0~20221030+~1.0.8-1 [20.0 kB]
Get: 203 http://deb.debian.org/debian trixie/main armhf libjs-lunr all 2.3.9~dfsg-2 [76.6 kB]
Get: 204 http://deb.debian.org/debian trixie/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5667 kB]
Get: 205 http://deb.debian.org/debian trixie/main armhf libjs-modernizr all 3.13.0-0.1 [191 kB]
Get: 206 http://deb.debian.org/debian trixie/main armhf libjs-prettify all 2015.12.04+dfsg-1.1 [41.7 kB]
Get: 207 http://deb.debian.org/debian trixie/main armhf libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [32.1 kB]
Get: 208 http://deb.debian.org/debian trixie/main armhf liblua5.4-0 armhf 5.4.6-3+b1 [122 kB]
Get: 209 http://deb.debian.org/debian trixie/main armhf libuv1t64 armhf 1.48.0-6 [134 kB]
Get: 210 http://deb.debian.org/debian trixie/main armhf libyaml-0-2 armhf 0.2.5-1+b1 [45.5 kB]
Get: 211 http://deb.debian.org/debian trixie/main armhf r-cran-littler armhf 0.3.20-1 [91.7 kB]
Get: 212 http://deb.debian.org/debian trixie/main armhf littler all 0.3.20-1 [16.0 kB]
Get: 213 http://deb.debian.org/debian trixie/main armhf node-bootstrap-sass all 3.4.3-2 [186 kB]
Get: 214 http://deb.debian.org/debian trixie/main armhf node-html5shiv all 3.7.3+dfsg-5 [13.2 kB]
Get: 215 http://deb.debian.org/debian trixie/main armhf node-normalize.css all 8.0.1-5 [12.7 kB]
Get: 216 http://deb.debian.org/debian trixie/main armhf pandoc-data all 3.1.3-3 [446 kB]
Get: 217 http://deb.debian.org/debian trixie/main armhf pandoc armhf 3.1.3+ds-3+b1 [28.5 MB]
Get: 218 http://deb.debian.org/debian trixie/main armhf r-bioc-biocgenerics all 0.50.0-2 [607 kB]
Get: 219 http://deb.debian.org/debian trixie/main armhf r-bioc-biocversion all 3.19.1-1 [10.9 kB]
Get: 220 http://deb.debian.org/debian trixie/main armhf r-cran-base64enc armhf 0.1-3-3 [27.6 kB]
Get: 221 http://deb.debian.org/debian trixie/main armhf r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB]
Get: 222 http://deb.debian.org/debian trixie/main armhf r-cran-digest armhf 0.6.37-1 [211 kB]
Get: 223 http://deb.debian.org/debian trixie/main armhf r-cran-fastmap armhf 1.2.0-1 [68.5 kB]
Get: 224 http://deb.debian.org/debian trixie/main armhf r-cran-rlang armhf 1.1.4-1 [1705 kB]
Get: 225 http://deb.debian.org/debian trixie/main armhf r-cran-htmltools armhf 0.5.8.1-1 [378 kB]
Get: 226 http://deb.debian.org/debian trixie/main armhf r-cran-evaluate all 1.0.0-1 [112 kB]
Get: 227 http://deb.debian.org/debian trixie/main armhf r-cran-xfun armhf 0.48+dfsg-1 [544 kB]
Get: 228 http://deb.debian.org/debian trixie/main armhf r-cran-highr all 0.11+dfsg-1 [38.3 kB]
Get: 229 http://deb.debian.org/debian trixie/main armhf r-cran-yaml armhf 2.3.10-1 [98.5 kB]
Get: 230 http://deb.debian.org/debian trixie/main armhf r-cran-knitr all 1.48+dfsg-1 [912 kB]
Get: 231 http://deb.debian.org/debian trixie/main armhf r-cran-cachem armhf 1.1.0-1 [73.7 kB]
Get: 232 http://deb.debian.org/debian trixie/main armhf r-cran-jquerylib all 0.1.4+dfsg-4 [13.1 kB]
Get: 233 http://deb.debian.org/debian trixie/main armhf r-cran-jsonlite armhf 1.8.9+dfsg-1 [441 kB]
Get: 234 http://deb.debian.org/debian trixie/main armhf r-cran-cli armhf 3.6.3-1 [1336 kB]
Get: 235 http://deb.debian.org/debian trixie/main armhf r-cran-glue armhf 1.7.0-1 [156 kB]
Get: 236 http://deb.debian.org/debian trixie/main armhf r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
Get: 237 http://deb.debian.org/debian trixie/main armhf r-cran-memoise all 2.0.1-1 [53.8 kB]
Get: 238 http://deb.debian.org/debian trixie/main armhf r-cran-mime armhf 0.12-2 [35.3 kB]
Get: 239 http://deb.debian.org/debian trixie/main armhf r-cran-fs armhf 1.6.4+dfsg-1 [244 kB]
Get: 240 http://deb.debian.org/debian trixie/main armhf r-cran-r6 all 2.5.1-1 [105 kB]
Get: 241 http://deb.debian.org/debian trixie/main armhf r-cran-rappdirs armhf 0.3.3-1 [47.3 kB]
Get: 242 http://deb.debian.org/debian trixie/main armhf r-cran-sass armhf 0.4.9+dfsg-1 [868 kB]
Get: 243 http://deb.debian.org/debian trixie/main armhf r-cran-bslib all 0.7.0+dfsg-1 [4365 kB]
Get: 244 http://deb.debian.org/debian trixie/main armhf r-cran-fontawesome all 0.5.2-1 [1286 kB]
Get: 245 http://deb.debian.org/debian trixie/main armhf r-cran-tinytex all 0.53-1 [146 kB]
Get: 246 http://deb.debian.org/debian trixie/main armhf r-cran-pkgkitten all 0.2.4-1 [29.1 kB]
Get: 247 http://deb.debian.org/debian trixie/main armhf r-cran-rcpp armhf 1.0.13-1 [2064 kB]
Get: 248 http://deb.debian.org/debian trixie/main armhf r-cran-later armhf 1.3.2+dfsg-1 [111 kB]
Get: 249 http://deb.debian.org/debian trixie/main armhf r-cran-magrittr armhf 2.0.3-1 [201 kB]
Get: 250 http://deb.debian.org/debian trixie/main armhf r-cran-promises armhf 1.3.0+dfsg-1 [281 kB]
Get: 251 http://deb.debian.org/debian trixie/main armhf r-cran-httpuv armhf 1.6.15+dfsg-1 [464 kB]
Get: 252 http://deb.debian.org/debian trixie/main armhf r-cran-xtable all 1:1.8-4-2 [689 kB]
Get: 253 http://deb.debian.org/debian trixie/main armhf r-cran-sourcetools armhf 0.1.7-1-1 [43.7 kB]
Get: 254 http://deb.debian.org/debian trixie/main armhf r-cran-crayon all 1.5.2-1 [165 kB]
Get: 255 http://deb.debian.org/debian trixie/main armhf r-cran-withr all 3.0.1+dfsg-1 [226 kB]
Get: 256 http://deb.debian.org/debian trixie/main armhf r-cran-commonmark armhf 1.9.1-1 [98.2 kB]
Get: 257 http://deb.debian.org/debian trixie/main armhf r-cran-shiny all 1.9.1+dfsg-1 [3126 kB]
Get: 258 http://deb.debian.org/debian trixie/main armhf r-cran-rmarkdown all 2.28+dfsg-1 [1474 kB]
Get: 259 http://deb.debian.org/debian trixie/main armhf r-cran-bookdown all 0.40+dfsg-1 [1404 kB]
Fetched 157 MB in 15s (10.2 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
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Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64'
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Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
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Creating config file /etc/papersize with new version
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Regenerating fonts cache... done.
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Not building database; man-db/auto-update is not 'true'.
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Setting up debhelper (13.20) ...
Setting up libmodule-runtime-conflicts-perl (0.003-2) ...
Setting up gfortran (4:14.2.0-1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libclass-load-perl (0.25-2) ...
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Creating config file /etc/R/Renviron with new version
Setting up r-cran-crayon (1.5.2-1) ...
Setting up r-cran-sourcetools (0.1.7-1-1) ...
Setting up libpackage-deprecationmanager-perl (0.18-1) ...
Setting up libdevel-overloadinfo-perl (0.007-1) ...
Setting up libclass-load-xs-perl (0.10-2+b3) ...
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Setting up r-cran-r6 (2.5.1-1) ...
Setting up r-cran-pkgkitten (0.2.4-1) ...
Setting up libb-hooks-endofscope-perl (0.28-1) ...
Setting up r-cran-magrittr (2.0.3-1) ...
Setting up r-cran-rappdirs (0.3.3-1) ...
Setting up r-cran-littler (0.3.20-1) ...
Setting up r-cran-fs (1.6.4+dfsg-1) ...
Setting up r-cran-rcpp (1.0.13-1) ...
Setting up r-bioc-biocgenerics (0.50.0-2) ...
Setting up r-cran-rlang (1.1.4-1) ...
Setting up r-base-dev (4.4.1-3) ...
Setting up littler (0.3.20-1) ...
Setting up r-cran-xfun (0.48+dfsg-1) ...
Setting up r-cran-withr (3.0.1+dfsg-1) ...
Setting up r-cran-mime (0.12-2) ...
Setting up libmoose-perl:armhf (2.2207-1+b1) ...
Setting up r-cran-base64enc (0.1-3-3) ...
Setting up r-cran-digest (0.6.37-1) ...
Setting up r-cran-yaml (2.3.10-1) ...
Setting up r-cran-evaluate (1.0.0-1) ...
Setting up r-cran-highr (0.11+dfsg-1) ...
Setting up r-cran-glue (1.7.0-1) ...
Setting up r-cran-xtable (1:1.8-4-2) ...
Setting up r-cran-cli (3.6.3-1) ...
Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
Setting up r-bioc-biocversion (3.19.1-1) ...
Setting up r-cran-biocmanager (1.30.25+dfsg-1) ...
Setting up r-cran-fastmap (1.2.0-1) ...
Setting up r-cran-jsonlite (1.8.9+dfsg-1) ...
Setting up libnamespace-clean-perl (0.27-2) ...
Setting up r-cran-later (1.3.2+dfsg-1) ...
Setting up r-cran-htmltools (0.5.8.1-1) ...
Setting up r-cran-tinytex (0.53-1) ...
Setting up r-cran-knitr (1.48+dfsg-1) ...
Setting up r-cran-cachem (1.1.0-1) ...
Setting up r-cran-sass (0.4.9+dfsg-1) ...
Setting up libwww-curl-simple-perl (0.100191-3) ...
Setting up r-cran-fontawesome (0.5.2-1) ...
Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
Setting up r-cran-memoise (2.0.1-1) ...
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Setting up r-cran-shiny (1.9.1+dfsg-1) ...
Setting up r-cran-rmarkdown (2.28+dfsg-1) ...
Setting up r-cran-bookdown (0.40+dfsg-1) ...
Processing triggers for libc-bin (2.40-3) ...
Processing triggers for ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/r-bioc-biocstyle-2.32.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../r-bioc-biocstyle_2.32.1+dfsg-1_source.changes
dpkg-buildpackage: info: source package r-bioc-biocstyle
dpkg-buildpackage: info: source version 2.32.1+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --buildsystem R
   dh_auto_clean -O--buildsystem=R
   dh_autoreconf_clean -O--buildsystem=R
   dh_clean -O--buildsystem=R
 debian/rules binary
dh binary --buildsystem R
   dh_update_autotools_config -O--buildsystem=R
   dh_autoreconf -O--buildsystem=R
   dh_auto_configure -O--buildsystem=R
   dh_auto_build -O--buildsystem=R
   dh_auto_test -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=R
   dh_prep -O--buildsystem=R
   dh_auto_install --destdir=debian/r-bioc-biocstyle/ -O--buildsystem=R
I: R Package: BiocStyle Version: 2.32.1
I: Building using R version 4.4.1-3
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Fri, 16 Aug 2024 13:23:41 +0200
	mkdir -p /build/reproducible-path/r-bioc-biocstyle-2.32.1\+dfsg/debian/r-bioc-biocstyle/usr/lib/R/site-library
	R CMD INSTALL -l /build/reproducible-path/r-bioc-biocstyle-2.32.1\+dfsg/debian/r-bioc-biocstyle/usr/lib/R/site-library --clean . "--built-timestamp='Fri, 16 Aug 2024 13:23:41 +0200'"
* installing *source* package 'BiocStyle' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BiocStyle)
I: Using r-bioc-biocgenerics for Suggests:BiocGenerics
I: Using r-cran-runit for Suggests:RUnit
I: Using r-cran-htmltools for Suggests:htmltools
I: Using r-cran-bookdown for Imports:bookdown
I: Using r-cran-knitr for Imports:knitr (>= 1.30)
I: Using r-cran-rmarkdown for Imports:rmarkdown (>= 1.2)
I: Using r-cran-yaml for Imports:yaml
I: Using r-cran-biocmanager for Imports:BiocManager
I: BioConductor API version: r-api-bioc-3.19
I: Use r-bioc-biocstyle as Debian binary package for variables substitution
   debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/r-bioc-biocstyle-2.32.1+dfsg'
dh_install
# For whatever reason this test is failing - remove it for the moment
find debian -name test_pdf_document.R -delete
make[1]: Leaving directory '/build/reproducible-path/r-bioc-biocstyle-2.32.1+dfsg'
   dh_installdocs -O--buildsystem=R
   dh_installchangelogs -O--buildsystem=R
   dh_installsystemduser -O--buildsystem=R
   dh_perl -O--buildsystem=R
   debian/rules override_dh_link
make[1]: Entering directory '/build/reproducible-path/r-bioc-biocstyle-2.32.1+dfsg'
dh_link
dh_link usr/share/texlive/texmf-dist/bibtex/bst/urlbst/unsrturl.bst usr/lib/R/site-library/BiocStyle/resources/tex/unsrturl.bst
make[1]: Leaving directory '/build/reproducible-path/r-bioc-biocstyle-2.32.1+dfsg'
   dh_strip_nondeterminism -O--buildsystem=R
   dh_compress -O--buildsystem=R
   dh_fixperms -O--buildsystem=R
   dh_missing -O--buildsystem=R
   dh_installdeb -O--buildsystem=R
   dh_gencontrol -O--buildsystem=R
   dh_md5sums -O--buildsystem=R
   dh_builddeb -O--buildsystem=R
dpkg-deb: building package 'r-bioc-biocstyle' in '../r-bioc-biocstyle_2.32.1+dfsg-1_all.deb'.
 dpkg-genbuildinfo --build=binary -O../r-bioc-biocstyle_2.32.1+dfsg-1_armhf.buildinfo
 dpkg-genchanges --build=binary -O../r-bioc-biocstyle_2.32.1+dfsg-1_armhf.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/2736 and its subdirectories
I: Current time: Mon Oct 14 23:21:54 -12 2024
I: pbuilder-time-stamp: 1728991314
Tue Oct 15 11:22:02 UTC 2024  I: 1st build successful. Starting 2nd build on remote node cbxi4a-armhf-rb.debian.net.
Tue Oct 15 11:22:02 UTC 2024  I: Preparing to do remote build '2' on cbxi4a-armhf-rb.debian.net.
Tue Oct 15 11:31:03 UTC 2024  I: Deleting $TMPDIR on cbxi4a-armhf-rb.debian.net.
Tue Oct 15 11:31:06 UTC 2024  I: r-bioc-biocstyle_2.32.1+dfsg-1_armhf.changes:
Format: 1.8
Date: Fri, 16 Aug 2024 13:23:41 +0200
Source: r-bioc-biocstyle
Binary: r-bioc-biocstyle
Architecture: all
Version: 2.32.1+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By: Michael R. Crusoe <crusoe@debian.org>
Description:
 r-bioc-biocstyle - standard styles for vignettes and other Bioconductor documents
Changes:
 r-bioc-biocstyle (2.32.1+dfsg-1) unstable; urgency=medium
 .
   * Team upload.
   * Upload to unstable.
Checksums-Sha1:
 660942c1e6ab4c470f11d44be3e29f92b525378b 453532 r-bioc-biocstyle_2.32.1+dfsg-1_all.deb
 1db70c35272938bff114654e039150bdcf077fdd 12037 r-bioc-biocstyle_2.32.1+dfsg-1_armhf.buildinfo
Checksums-Sha256:
 fe969e1f335beb7f308fe9413b121459cdbd0a5fd79d3c83366b634220722bc4 453532 r-bioc-biocstyle_2.32.1+dfsg-1_all.deb
 23be0504b9f72b1b4501c4e937df8c36ac37283c2b3726daba7ec73dbe0ac846 12037 r-bioc-biocstyle_2.32.1+dfsg-1_armhf.buildinfo
Files:
 408e0ee42484a4eb71d7741dba043935 453532 gnu-r optional r-bioc-biocstyle_2.32.1+dfsg-1_all.deb
 b985fa055ba89725b201a5d5816d01ad 12037 gnu-r optional r-bioc-biocstyle_2.32.1+dfsg-1_armhf.buildinfo
Tue Oct 15 11:31:07 UTC 2024  I: diffoscope 280 will be used to compare the two builds:
Running as unit: rb-diffoscope-armhf_7-4544.service
Warning: program compiled against libxml 212 using older 209
# Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.y5rlDB2w/r-bioc-biocstyle_2.32.1+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.y5rlDB2w/r-bioc-biocstyle_2.32.1+dfsg-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.y5rlDB2w/r-bioc-biocstyle_2.32.1+dfsg-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.y5rlDB2w/b1/r-bioc-biocstyle_2.32.1+dfsg-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.y5rlDB2w/b2/r-bioc-biocstyle_2.32.1+dfsg-1_armhf.changes

## command (total time: 0.000s)
       0.000s      1 call     cmp (internal)

## has_same_content_as (total time: 0.000s)
       0.000s      1 call     abc.DotChangesFile

## main (total time: 0.391s)
       0.391s      2 calls    outputs
       0.000s      1 call     cleanup

## recognizes (total time: 0.020s)
       0.020s     12 calls    diffoscope.comparators.binary.FilesystemFile

## specialize (total time: 0.000s)
       0.000s      1 call     specialize
Finished with result: success
Main processes terminated with: code=exited/status=0
Service runtime: 726ms
CPU time consumed: 727ms
Tue Oct 15 11:31:09 UTC 2024  I: diffoscope 280 found no differences in the changes files, and a .buildinfo file also exists.
Tue Oct 15 11:31:09 UTC 2024  I: r-bioc-biocstyle from trixie built successfully and reproducibly on armhf.
Tue Oct 15 11:31:10 UTC 2024  I: Submitting .buildinfo files to external archives:
Tue Oct 15 11:31:10 UTC 2024  I: Submitting 16K	b1/r-bioc-biocstyle_2.32.1+dfsg-1_armhf.buildinfo.asc
Tue Oct 15 11:31:11 UTC 2024  I: Submitting 16K	b2/r-bioc-biocstyle_2.32.1+dfsg-1_armhf.buildinfo.asc
Tue Oct 15 11:31:12 UTC 2024  I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Tue Oct 15 11:31:12 UTC 2024  I: Done submitting .buildinfo files.
Tue Oct 15 11:31:12 UTC 2024  I: Removing signed r-bioc-biocstyle_2.32.1+dfsg-1_armhf.buildinfo.asc files:
removed './b1/r-bioc-biocstyle_2.32.1+dfsg-1_armhf.buildinfo.asc'
removed './b2/r-bioc-biocstyle_2.32.1+dfsg-1_armhf.buildinfo.asc'