Fri Nov 8 02:09:19 UTC 2024 I: starting to build python-gsd/trixie/armhf on jenkins on '2024-11-08 02:09' Fri Nov 8 02:09:19 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_8/11512/console.log Fri Nov 8 02:09:19 UTC 2024 I: Downloading source for trixie/python-gsd=3.3.0-1 --2024-11-08 02:09:20-- http://deb.debian.org/debian/pool/main/p/python-gsd/python-gsd_3.3.0-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2495 (2.4K) [text/prs.lines.tag] Saving to: ‘python-gsd_3.3.0-1.dsc’ 0K .. 100% 235M=0s 2024-11-08 02:09:20 (235 MB/s) - ‘python-gsd_3.3.0-1.dsc’ saved [2495/2495] Fri Nov 8 02:09:20 UTC 2024 I: python-gsd_3.3.0-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: python-gsd Binary: python3-gsd, python-gsd-doc Architecture: any all Version: 3.3.0-1 Maintainer: Debichem Team Uploaders: Drew Parsons Homepage: https://gsd.readthedocs.io/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/debichem-team/python-gsd Vcs-Git: https://salsa.debian.org/debichem-team/python-gsd.git Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-pytest Build-Depends: debhelper-compat (= 13), cython3, dh-python, pybuild-plugin-pyproject, python3-setuptools, python3-all-dev, python3-ipython, python3-numpy (>= 1:1.19.0~), python3-pytest , python3-sphinx, architecture-properties, architecture-is-little-endian Build-Depends-Indep: python3-doc, doxygen , furo, libjs-mathjax , python3-breathe, python-numpy-doc , python3-pandas, python3-sphinx-rtd-theme , python3-sphinx-copybutton Package-List: python-gsd-doc deb doc optional arch=all python3-gsd deb python optional arch=any Checksums-Sha1: 468bd1ad8133f892344991aed1ae3c1135f57602 108597 python-gsd_3.3.0.orig.tar.gz 4bc88f58c532a6c9060c234b748d401d8d4db928 6116 python-gsd_3.3.0-1.debian.tar.xz Checksums-Sha256: 3b2f478cb0c6fa1f0d6651c3f14d9436a2082c7ee4d08b053ce121675cd3060b 108597 python-gsd_3.3.0.orig.tar.gz ee93055440813a1d1363d755a70bcdbda9e9af1dc591e8933cac5a2367f700d0 6116 python-gsd_3.3.0-1.debian.tar.xz Files: 8b1930019791ea559e314a0b7e849818 108597 python-gsd_3.3.0.orig.tar.gz a796d72250ea320bf029cb0e8a49b5d7 6116 python-gsd_3.3.0-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmaIHvUACgkQVz7x5L1a AfqALg/+MwJLswjbkRsphfftxNYwrTotrEKnGqPZ0x9kCHFigOaonWPRYZjG1RmQ AUr4L7ryY9Y0gnq3nVfPqxBonBbcjPjJCnVvGklFmAnHPQ+qzPAtDtEn4qFojpAr G1hOi4Hh4+7ip7/MWc92w3mTFtSnOGqKIWdReP3Cnn/0chCowZ9dtZIarc0/+uEB 0fufFSinVULeUszuVoBS3hjZJQhubNXNCp1dgzp2xGFxCm9zpxllgYba7Y/kJPQA /Q61ORDkNfhT3A6ugVupm8laYUGQEodyZyF0oiPf46vW2N7dgnLk6g9lDaDGtRwt PIZcfpK2hQfulCU+BCvBgJfttQ8QeyC2h+voKrtIyVxexqm1knhSw0h1/rKINI10 5oi/QVfRhknguBWw90bYVj9ZYYYc/D69DRkfBeTR/kQunI192/+Bpu1ZsqgsMSiA P6zPAP5HVDCrw7o+c6pIcAOo7WRCt/38dAXoKJN/iANfdvMKCnaXN/DVValwzXXZ B8DDHhA9Jps38OR8GwbWvpxAsVrS8jzwwCiJU6tTyHFU4oNJSwUqnSAnGXFtD+uv v8cfw7CbxN+pruwl0yX5vS4q+pL/e5zqN+MGx7BA5gArzSSJIi75S6DbWQASMcmw C8AN9AWG0EBkmnY3Buq7qxAPWoBbigHMyXVRJL4CEmLwY+AREVk= =oWxK -----END PGP SIGNATURE----- Fri Nov 8 02:09:20 UTC 2024 I: Checking whether the package is not for us Fri Nov 8 02:09:20 UTC 2024 I: Starting 1st build on remote node virt64a-armhf-rb.debian.net. Fri Nov 8 02:09:20 UTC 2024 I: Preparing to do remote build '1' on virt64a-armhf-rb.debian.net. Fri Nov 8 02:20:00 UTC 2024 I: Deleting $TMPDIR on virt64a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Nov 7 14:09:27 -12 2024 I: pbuilder-time-stamp: 1731031767 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-gsd_3.3.0-1.dsc] I: copying [./python-gsd_3.3.0.orig.tar.gz] I: copying [./python-gsd_3.3.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Jul 5 16:27:33 2024 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-gsd_3.3.0-1.dsc: no acceptable signature found dpkg-source: info: extracting python-gsd in python-gsd-3.3.0 dpkg-source: info: unpacking python-gsd_3.3.0.orig.tar.gz dpkg-source: info: unpacking python-gsd_3.3.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying docs_local_scripts.patch dpkg-source: info: applying test_large_32bit.patch dpkg-source: info: applying doc_ignore_exceptions.patch dpkg-source: info: applying docs_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/7356/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='e6bb6e8a385f4701942a1733d95ffdfd' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='7356' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.RfZgUqgp/pbuilderrc_nfcz --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.RfZgUqgp/b1 --logfile b1/build.log python-gsd_3.3.0-1.dsc' SUDO_GID='114' SUDO_UID='108' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64a 6.1.0-26-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/7356/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cython3, dh-python, pybuild-plugin-pyproject, python3-setuptools, python3-all-dev, python3-ipython, python3-numpy (>= 1:1.19.0~), python3-pytest, python3-sphinx, architecture-properties, architecture-is-little-endian, python3-doc, doxygen, furo, libjs-mathjax, python3-breathe, python-numpy-doc, python3-pandas, python3-sphinx-rtd-theme, python3-sphinx-copybutton dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ipython; however: Package python3-ipython is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy (>= 1:1.19.0~); however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on architecture-properties; however: Package architecture-properties is not installed. pbuilder-satisfydepends-dummy depends on architecture-is-little-endian; however: Package architecture-is-little-endian is not installed. pbuilder-satisfydepends-dummy depends on python3-doc; however: Package python3-doc is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on furo; however: Package furo is not installed. pbuilder-satisfydepends-dummy depends on libjs-mathjax; however: Package libjs-mathjax is not installed. pbuilder-satisfydepends-dummy depends on python3-breathe; however: Package python3-breathe is not installed. pbuilder-satisfydepends-dummy depends on python-numpy-doc; however: Package python-numpy-doc is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-copybutton; however: Package python3-sphinx-copybutton is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: architecture-properties{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-mathjax{a} furo{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libabsl20230802{a} libaom3{a} libarchive-zip-perl{a} libavif16{a} libblas3{a} libbrotli1{a} libcairo2{a} libcdt5{a} libcgraph6{a} libclang-cpp19{a} libclang1-19{a} libcom-err2{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfmt9{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgd3{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblapack3{a} liblerc4{a} libllvm19{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} libsharpyuv0{a} libsm6{a} libsvtav1enc2{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libwebp7{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6t64{a} libyuv0{a} libz3-4{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-numpy-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-asttokens{a} python3-autocommand{a} python3-babel{a} python3-breathe{a} python3-bs4{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-doc{a} python3-docutils{a} python3-executing{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-ipython{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jedi{a} python3-jinja2{a} python3-markupsafe{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-pexpect{a} python3-pkg-resources{a} python3-pluggy{a} python3-prompt-toolkit{a} python3-ptyprocess{a} python3-pure-eval{a} python3-pygments{a} python3-pyproject-hooks{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-setuptools{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-copybutton{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-stack-data{a} python3-toml{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-urllib3{a} python3-wcwidth{a} python3-wheel{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-doc{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-basic-ng{a} sphinx-common{a} sphinx-rtd-theme-common{a} tzdata{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-liberation javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libltdl-dev libmail-sendmail-perl libpaper-utils lynx python3-bottleneck python3-html5lib python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-pil python3-scipy python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 225 newly installed, 0 to remove and 0 not upgraded. Need to get 170 MB of archives. After unpacking 775 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf fonts-lato all 2.015-1 [2780 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libpython3.12-minimal armhf 3.12.6-1 [800 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.3-2 [83.1 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3.12-minimal armhf 3.12.6-1 [1812 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.12.6-1 [26.7 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf tzdata all 2024a-4 [255 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.1-1+b1 [22.3 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 13 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3+b1 [71.3 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf libnsl2 armhf 1.3.0-3+b3 [35.0 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-5 [69.3 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-5 [146 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libpython3.12-stdlib armhf 3.12.6-1 [1817 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf python3.12 armhf 3.12.6-1 [669 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.12.6-1 [9692 B] Get: 23 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.12.6-1 [27.8 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf sgml-base all 1.31 [15.4 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.3.2-2 [1348 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-9 [88.8 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf architecture-properties armhf 0.2.3 [2188 B] Get: 38 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-2 [723 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf cython3 armhf 3.0.11+dfsg-1 [2265 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-8 [517 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 50 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5+b1 [9088 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.1 [604 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf python3-typeguard all 4.4.1-1 [37.0 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf python3-inflect all 7.3.1-2 [32.4 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf python3-jaraco.context all 6.0.0-1 [7984 B] Get: 64 http://deb.debian.org/debian trixie/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 74.1.2-2 [213 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf python3-zipp all 3.20.2-1 [10.3 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf python3-setuptools all 74.1.2-2 [736 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf dh-python all 6.20241024 [109 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf xml-core all 0.19 [20.1 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf libedit2 armhf 3.1-20240808-1 [77.9 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libz3-4 armhf 4.13.3-1 [7252 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf libllvm19 armhf 1:19.1.3-1 [23.8 MB] Get: 74 http://deb.debian.org/debian trixie/main armhf libclang-cpp19 armhf 1:19.1.3-1 [11.6 MB] Get: 75 http://deb.debian.org/debian trixie/main armhf libclang1-19 armhf 1:19.1.3-1 [6609 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf libfmt9 armhf 9.1.0+ds1-2 [105 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf doxygen armhf 1.9.8+ds-2+b2 [4530 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b5 [296 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf libpng16-16t64 armhf 1.6.44-2 [263 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf fontconfig-config armhf 2.15.0-1.1+b1 [318 kB] Get: 84 http://deb.debian.org/debian trixie/main armhf libfontconfig1 armhf 2.15.0-1.1+b1 [371 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf fontconfig armhf 2.15.0-1.1+b1 [461 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf python3-soupsieve all 2.6-1 [38.3 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf python3-bs4 all 4.12.3-3 [133 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf libjson-perl all 4.10000-1 [87.5 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf sphinx-common all 7.4.7-4 [731 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf python-babel-localedata all 2.14.0-1 [5701 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf python3-tz all 2024.1-2 [30.9 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf python3-babel all 2.14.0-1 [111 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf python3-roman all 4.2-1 [10.4 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf python3-imagesize all 1.4.1-1 [6688 B] Get: 104 http://deb.debian.org/debian trixie/main armhf python3-markupsafe armhf 2.1.5-1+b1 [13.2 kB] Get: 105 http://deb.debian.org/debian trixie/main armhf python3-jinja2 all 3.1.3-1 [119 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf python3-packaging all 24.1-1 [45.8 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 108 http://deb.debian.org/debian trixie/main armhf python3-charset-normalizer armhf 3.4.0-1 [111 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf python3-idna all 3.8-2 [41.6 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf python3-urllib3 all 2.0.7-2 [111 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 112 http://deb.debian.org/debian trixie/main armhf python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf python3-sphinx all 7.4.7-4 [588 kB] Get: 115 http://deb.debian.org/debian trixie/main armhf sphinx-basic-ng all 1.0.0~beta2-1 [13.0 kB] Get: 116 http://deb.debian.org/debian trixie/main armhf furo all 2024.08.06+dfsg-1 [62.8 kB] Get: 117 http://deb.debian.org/debian trixie/main armhf libcdt5 armhf 2.42.4-2+b1 [37.9 kB] Get: 118 http://deb.debian.org/debian trixie/main armhf libcgraph6 armhf 2.42.4-2+b1 [56.8 kB] Get: 119 http://deb.debian.org/debian trixie/main armhf libaom3 armhf 3.10.0-1 [1571 kB] Get: 120 http://deb.debian.org/debian trixie/main armhf libdav1d7 armhf 1.5.0-1+b1 [250 kB] Get: 121 http://deb.debian.org/debian trixie/main armhf libabsl20230802 armhf 20230802.1-4 [432 kB] Get: 122 http://deb.debian.org/debian trixie/main armhf libgav1-1 armhf 0.19.0-2+b2 [298 kB] Get: 123 http://deb.debian.org/debian trixie/main armhf librav1e0.7 armhf 0.7.1-7+b2 [587 kB] Get: 124 http://deb.debian.org/debian trixie/main armhf libsvtav1enc2 armhf 2.2.1+dfsg-2 [937 kB] Get: 125 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-3+b1 [145 kB] Get: 126 http://deb.debian.org/debian trixie/main armhf libyuv0 armhf 0.0.1888.20240710-3+b1 [86.5 kB] Get: 127 http://deb.debian.org/debian trixie/main armhf libavif16 armhf 1.1.1-1 [103 kB] Get: 128 http://deb.debian.org/debian trixie/main armhf libsharpyuv0 armhf 1.4.0-0.1+b1 [111 kB] Get: 129 http://deb.debian.org/debian trixie/main armhf libheif-plugin-dav1d armhf 1.19.1-1 [10.7 kB] Get: 130 http://deb.debian.org/debian trixie/main armhf libde265-0 armhf 1.0.15-1+b2 [145 kB] Get: 131 http://deb.debian.org/debian trixie/main armhf libheif-plugin-libde265 armhf 1.19.1-1 [13.9 kB] Get: 132 http://deb.debian.org/debian trixie/main armhf libheif1 armhf 1.19.1-1 [410 kB] Get: 133 http://deb.debian.org/debian trixie/main armhf libimagequant0 armhf 2.18.0-1+b2 [30.5 kB] Get: 134 http://deb.debian.org/debian trixie/main armhf libfribidi0 armhf 1.0.15-1 [70.0 kB] Get: 135 http://deb.debian.org/debian trixie/main armhf libglib2.0-0t64 armhf 2.82.2-2 [1326 kB] Get: 136 http://deb.debian.org/debian trixie/main armhf libgraphite2-3 armhf 1.3.14-2+b1 [63.1 kB] Get: 137 http://deb.debian.org/debian trixie/main armhf libharfbuzz0b armhf 10.0.1-1 [418 kB] Get: 138 http://deb.debian.org/debian trixie/main armhf libraqm0 armhf 0.10.1-1+b2 [11.8 kB] Get: 139 http://deb.debian.org/debian trixie/main armhf libdeflate0 armhf 1.22-1 [36.3 kB] Get: 140 http://deb.debian.org/debian trixie/main armhf libjbig0 armhf 2.1-6.1+b2 [27.3 kB] Get: 141 http://deb.debian.org/debian trixie/main armhf liblerc4 armhf 4.0.0+ds-5 [146 kB] Get: 142 http://deb.debian.org/debian trixie/main armhf libwebp7 armhf 1.4.0-0.1+b1 [266 kB] Get: 143 http://deb.debian.org/debian trixie/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB] Get: 144 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB] Get: 145 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.2-3+b2 [23.0 kB] Get: 146 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB] Get: 147 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.7-1 [328 kB] Get: 148 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.7-1+b2 [741 kB] Get: 149 http://deb.debian.org/debian trixie/main armhf libxpm4 armhf 1:3.5.17-1+b2 [50.4 kB] Get: 150 http://deb.debian.org/debian trixie/main armhf libgd3 armhf 2.3.3-12+b1 [105 kB] Get: 151 http://deb.debian.org/debian trixie/main armhf libgts-0.7-5t64 armhf 0.7.6+darcs121130-5.2+b1 [133 kB] Get: 152 http://deb.debian.org/debian trixie/main armhf libpixman-1-0 armhf 0.42.2-1+b1 [476 kB] Get: 153 http://deb.debian.org/debian trixie/main armhf libxcb-render0 armhf 1.17.0-2+b1 [114 kB] Get: 154 http://deb.debian.org/debian trixie/main armhf libxcb-shm0 armhf 1.17.0-2+b1 [105 kB] Get: 155 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b2 [45.2 kB] Get: 156 http://deb.debian.org/debian trixie/main armhf libxrender1 armhf 1:0.9.10-1.1+b2 [25.0 kB] Get: 157 http://deb.debian.org/debian trixie/main armhf libcairo2 armhf 1.18.2-2 [443 kB] Get: 158 http://deb.debian.org/debian trixie/main armhf libltdl7 armhf 2.4.7-8 [390 kB] Get: 159 http://deb.debian.org/debian trixie/main armhf libthai-data all 0.1.29-2 [168 kB] Get: 160 http://deb.debian.org/debian trixie/main armhf libdatrie1 armhf 0.2.13-3+b1 [34.7 kB] Get: 161 http://deb.debian.org/debian trixie/main armhf libthai0 armhf 0.1.29-2+b1 [46.0 kB] Get: 162 http://deb.debian.org/debian trixie/main armhf libpango-1.0-0 armhf 1.54.0+ds-3 [198 kB] Get: 163 http://deb.debian.org/debian trixie/main armhf libpangoft2-1.0-0 armhf 1.54.0+ds-3 [47.6 kB] Get: 164 http://deb.debian.org/debian trixie/main armhf libpangocairo-1.0-0 armhf 1.54.0+ds-3 [31.1 kB] Get: 165 http://deb.debian.org/debian trixie/main armhf libpathplan4 armhf 2.42.4-2+b1 [39.9 kB] Get: 166 http://deb.debian.org/debian trixie/main armhf libgvc6 armhf 2.42.4-2+b1 [581 kB] Get: 167 http://deb.debian.org/debian trixie/main armhf libgvpr2 armhf 2.42.4-2+b1 [168 kB] Get: 168 http://deb.debian.org/debian trixie/main armhf liblab-gamut1 armhf 2.42.4-2+b1 [198 kB] Get: 169 http://deb.debian.org/debian trixie/main armhf x11-common all 1:7.7+23.1 [216 kB] Get: 170 http://deb.debian.org/debian trixie/main armhf libice6 armhf 2:1.1.1-1 [58.5 kB] Get: 171 http://deb.debian.org/debian trixie/main armhf libsm6 armhf 2:1.2.4-1 [33.5 kB] Get: 172 http://deb.debian.org/debian trixie/main armhf libxt6t64 armhf 1:1.2.1-1.2+b1 [160 kB] Get: 173 http://deb.debian.org/debian trixie/main armhf libxmu6 armhf 2:1.1.3-3+b3 [51.2 kB] Get: 174 http://deb.debian.org/debian trixie/main armhf libxaw7 armhf 2:1.0.16-1 [177 kB] Get: 175 http://deb.debian.org/debian trixie/main armhf graphviz armhf 2.42.4-2+b1 [500 kB] Get: 176 http://deb.debian.org/debian trixie/main armhf libblas3 armhf 3.12.0-3+b1 [111 kB] Get: 177 http://deb.debian.org/debian trixie/main armhf libexpat1-dev armhf 2.6.3-2 [140 kB] Get: 178 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14.2.0-6 [263 kB] Get: 179 http://deb.debian.org/debian trixie/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 180 http://deb.debian.org/debian trixie/main armhf liblapack3 armhf 3.12.0-3+b1 [1828 kB] Get: 181 http://deb.debian.org/debian trixie/main armhf libpython3.12t64 armhf 3.12.6-1 [1847 kB] Get: 182 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] Get: 183 http://deb.debian.org/debian trixie/main armhf libpython3.12-dev armhf 3.12.6-1 [3809 kB] Get: 184 http://deb.debian.org/debian trixie/main armhf libpython3-dev armhf 3.12.6-1 [9952 B] Get: 185 http://deb.debian.org/debian trixie/main armhf libpython3-all-dev armhf 3.12.6-1 [1064 B] Get: 186 http://deb.debian.org/debian trixie/main armhf python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 187 http://deb.debian.org/debian trixie/main armhf python3-toml all 0.10.2-1 [16.2 kB] Get: 188 http://deb.debian.org/debian trixie/main armhf python3-wheel all 0.44.0-2 [53.4 kB] Get: 189 http://deb.debian.org/debian trixie/main armhf python3-build all 1.2.2-1 [36.0 kB] Get: 190 http://deb.debian.org/debian trixie/main armhf python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 191 http://deb.debian.org/debian trixie/main armhf pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 192 http://deb.debian.org/debian trixie/main armhf python-numpy-doc all 1:1.26.4+ds-11 [9384 kB] Get: 193 http://deb.debian.org/debian trixie/main armhf python3-all armhf 3.12.6-1 [1040 B] Get: 194 http://deb.debian.org/debian trixie/main armhf python3.12-dev armhf 3.12.6-1 [506 kB] Get: 195 http://deb.debian.org/debian trixie/main armhf python3-dev armhf 3.12.6-1 [26.1 kB] Get: 196 http://deb.debian.org/debian trixie/main armhf python3-all-dev armhf 3.12.6-1 [1068 B] Get: 197 http://deb.debian.org/debian trixie/main armhf python3-asttokens all 2.4.1-2 [20.5 kB] Get: 198 http://deb.debian.org/debian trixie/main armhf python3-breathe all 4.35.0-3 [78.2 kB] Get: 199 http://deb.debian.org/debian trixie/main armhf python3-dateutil all 2.9.0-3 [79.3 kB] Get: 200 http://deb.debian.org/debian trixie/main armhf python3-decorator all 5.1.1-5 [15.1 kB] Get: 201 http://deb.debian.org/debian trixie/main armhf python3.12-doc all 3.12.6-1 [13.1 MB] Get: 202 http://deb.debian.org/debian trixie/main armhf python3-doc all 3.12.6-1 [9884 B] Get: 203 http://deb.debian.org/debian trixie/main armhf python3-executing all 2.1.0-0.1 [23.9 kB] Get: 204 http://deb.debian.org/debian trixie/main armhf python3-iniconfig all 1.1.1-2 [6396 B] Get: 205 http://deb.debian.org/debian trixie/main armhf python3-parso all 0.8.3-1 [67.4 kB] Get: 206 http://deb.debian.org/debian trixie/main armhf python3-typeshed all 0.0~git20231111.6764465-3 [1258 kB] Get: 207 http://deb.debian.org/debian trixie/main armhf python3-jedi all 0.19.1+ds1-1 [691 kB] Get: 208 http://deb.debian.org/debian trixie/main armhf python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 209 http://deb.debian.org/debian trixie/main armhf python3-matplotlib-inline all 0.1.6-2 [8652 B] Get: 210 http://deb.debian.org/debian trixie/main armhf python3-ptyprocess all 0.7.0-6 [14.5 kB] Get: 211 http://deb.debian.org/debian trixie/main armhf python3-pexpect all 4.9-3 [55.6 kB] Get: 212 http://deb.debian.org/debian trixie/main armhf python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB] Get: 213 http://deb.debian.org/debian trixie/main armhf python3-prompt-toolkit all 3.0.48-1 [277 kB] Get: 214 http://deb.debian.org/debian trixie/main armhf python3-pure-eval all 0.2.3-1 [11.2 kB] Get: 215 http://deb.debian.org/debian trixie/main armhf python3-stack-data all 0.6.3-1 [21.6 kB] Get: 216 http://deb.debian.org/debian trixie/main armhf python3-ipython all 8.20.0-1 [556 kB] Get: 217 http://deb.debian.org/debian trixie/main armhf python3-numpy armhf 1:1.26.4+ds-11 [3340 kB] Get: 218 http://deb.debian.org/debian trixie/main armhf python3-pandas-lib armhf 2.2.3+dfsg-5 [4010 kB] Get: 219 http://deb.debian.org/debian trixie/main armhf python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 220 http://deb.debian.org/debian trixie/main armhf python3-pluggy all 1.5.0-1 [26.9 kB] Get: 221 http://deb.debian.org/debian trixie/main armhf python3-pytest all 8.3.3-1 [249 kB] Get: 222 http://deb.debian.org/debian trixie/main armhf python3-sphinx-copybutton all 0.5.2-2 [17.9 kB] Get: 223 http://deb.debian.org/debian trixie/main armhf sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1022 kB] Get: 224 http://deb.debian.org/debian trixie/main armhf python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 225 http://deb.debian.org/debian trixie/main armhf python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [29.5 kB] Fetched 170 MB in 4s (38.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.12-minimal:armhf. Preparing to unpack .../libpython3.12-minimal_3.12.6-1_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.6-1) ... Selecting previously unselected package libexpat1:armhf. 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Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../14-libreadline8t64_8.2-5_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:armhf. 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Setting up m4 (1.4.19-4) ... Setting up libxcb-shm0:armhf (1.17.0-2+b1) ... Setting up libcom-err2:armhf (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libjbig0:armhf (2.1-6.1+b2) ... Setting up libelf1t64:armhf (0.192-4) ... Setting up python-babel-localedata (2.14.0-1) ... Setting up libkrb5support0:armhf (1.21.3-3) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Nov 8 02:12:43 UTC 2024. Universal Time is now: Fri Nov 8 02:12:43 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libz3-4:armhf (4.13.3-1) ... Setting up libglib2.0-0t64:armhf (2.82.2-2) ... No schema files found: doing nothing. Setting up libblas3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libexpat1-dev:armhf (2.6.3-2) ... 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Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libllvm19:armhf (1:19.1.3-1) ... Setting up libice6:armhf (2:1.1.1-1) ... Setting up liblapack3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up gettext (0.22.5-2) ... Setting up libclang1-19 (1:19.1.3-1) ... Setting up libxpm4:armhf (1:3.5.17-1+b2) ... Setting up libxrender1:armhf (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libxext6:armhf (2:1.3.4-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libthai0:armhf (0.1.29-2+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... Setting up libgav1-1:armhf (0.19.0-2+b2) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up libreadline8t64:armhf (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libgvpr2:armhf (2.42.4-2+b1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:armhf (10.0.1-1) ... Setting up libfontconfig1:armhf (2.15.0-1.1+b1) ... Setting up python3.12-doc (3.12.6-1) ... Setting up libsm6:armhf (2:1.2.4-1) ... Setting up python3-doc (3.12.6-1) ... Setting up libclang-cpp19 (1:19.1.3-1) ... Setting up python-numpy-doc (1:1.26.4+ds-11) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libavif16:armhf (1.1.1-1) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpango-1.0-0:armhf (1.54.0+ds-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:armhf (1.18.2-2) ... Setting up doxygen (1.9.8+ds-2+b2) ... Setting up libraqm0:armhf (0.10.1-1+b2) ... Setting up sphinx-common (7.4.7-4) ... Setting up libxt6t64:armhf (1:1.2.1-1.2+b1) ... Setting up libnsl2:armhf (1.3.0-3+b3) ... Setting up libpangoft2-1.0-0:armhf (1.54.0+ds-3) ... Setting up libpangocairo-1.0-0:armhf (1.54.0+ds-3) ... Setting up libxmu6:armhf (2:1.1.3-3+b3) ... Setting up libpython3.12-stdlib:armhf (3.12.6-1) ... Setting up python3.12 (3.12.6-1) ... Setting up debhelper (13.20) ... Setting up libxaw7:armhf (2:1.0.16-1) ... Setting up libpython3.12t64:armhf (3.12.6-1) ... Setting up libpython3-stdlib:armhf (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up libpython3.12-dev:armhf (3.12.6-1) ... Setting up python3-zipp (3.20.2-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b1) ... Setting up python3-wheel (0.44.0-2) ... Setting up python3-tz (2024.1-2) ... Setting up python3-roman (4.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up python3-wcwidth (0.2.13+dfsg1-1) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-typeshed (0.0~git20231111.6764465-3) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-idna (3.8-2) ... Setting up python3.12-dev (3.12.6-1) ... Setting up cython3 (3.0.11+dfsg-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-build (1.2.2-1) ... Setting up python3-soupsieve (2.6-1) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-ptyprocess (0.7.0-6) ... Setting up python3-prompt-toolkit (3.0.48-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-pure-eval (0.2.3-1) ... Setting up libpython3-dev:armhf (3.12.6-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-parso (0.8.3-1) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-asttokens (2.4.1-2) ... Setting up python3-charset-normalizer (3.4.0-1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-bs4 (4.12.3-3) ... Setting up python3-matplotlib-inline (0.1.6-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-executing (2.1.0-0.1) ... Setting up libpython3-all-dev:armhf (3.12.6-1) ... Setting up python3-pexpect (4.9-3) ... Setting up python3-dev (3.12.6-1) ... Setting up python3-stack-data (0.6.3-1) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-all-dev (3.12.6-1) ... Setting up python3-setuptools (74.1.2-2) ... Setting up python3-jedi (0.19.1+ds1-1) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-ipython (8.20.0-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up dh-python (6.20241024) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up python3-pandas-lib:armhf (2.2.3+dfsg-5) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up libheif-plugin-dav1d:armhf (1.19.1-1) ... Setting up libheif-plugin-libde265:armhf (1.19.1-1) ... Setting up libheif1:armhf (1.19.1-1) ... Setting up libgd3:armhf (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up graphviz (2.42.4-2+b1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-sphinx-copybutton (0.5.2-2) ... Setting up python3-breathe (4.35.0-3) ... Setting up python3-sphinxcontrib.jquery (4.1-5) ... Setting up sphinx-basic-ng (1.0.0~beta2-1) ... Setting up python3-sphinx-rtd-theme (3.0.1+dfsg-1) ... Setting up furo (2024.08.06+dfsg-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-gsd-3.3.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-gsd_3.3.0-1_source.changes dpkg-buildpackage: info: source package python-gsd dpkg-buildpackage: info: source version 3.3.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf dpkg-source: info: using options from python-gsd-3.3.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/python-gsd-3.3.0' dh_clean rm -f gsd/fl.c || /bin/true rm -rf devdoc rm -rf gsd/test/.pytest_cache make[1]: Leaving directory '/build/reproducible-path/python-gsd-3.3.0' debian/rules binary dh binary --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd * Building wheel... Compiling gsd/fl.pyx because it changed. [1/1] Cythonizing gsd/fl.pyx running bdist_wheel running build running build_py creating build creating build/lib.linux-armv7l-cpython-312 creating build/lib.linux-armv7l-cpython-312/gsd copying gsd/pygsd.py -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/version.py -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/__main__.py -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/hoomd.py -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/conftest.py -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/__init__.py -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/pytest_plugin_validate.py -> build/lib.linux-armv7l-cpython-312/gsd creating build/lib.linux-armv7l-cpython-312/gsd/test copying gsd/test/conftest.py -> build/lib.linux-armv7l-cpython-312/gsd/test copying gsd/test/test_fl.py -> build/lib.linux-armv7l-cpython-312/gsd/test copying gsd/test/test_largefile.py -> build/lib.linux-armv7l-cpython-312/gsd/test copying gsd/test/test_hoomd.py -> build/lib.linux-armv7l-cpython-312/gsd/test running egg_info creating gsd.egg-info writing gsd.egg-info/PKG-INFO writing dependency_links to gsd.egg-info/dependency_links.txt writing entry points to gsd.egg-info/entry_points.txt writing requirements to gsd.egg-info/requires.txt writing top-level names to gsd.egg-info/top_level.txt writing manifest file 'gsd.egg-info/SOURCES.txt' dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'gsd.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'gsd.egg-info/SOURCES.txt' copying gsd/fl.c -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/fl.pyx -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/gsd.c -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/gsd.h -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/libgsd.pxd -> build/lib.linux-armv7l-cpython-312/gsd copying gsd/test/pytest.ini -> build/lib.linux-armv7l-cpython-312/gsd/test copying gsd/test/test_gsd_v1.gsd -> build/lib.linux-armv7l-cpython-312/gsd/test running build_ext building 'gsd.fl' extension creating build/temp.linux-armv7l-cpython-312 creating build/temp.linux-armv7l-cpython-312/gsd arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-gsd-3.3.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -Igsd -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c gsd/fl.c -o build/temp.linux-armv7l-cpython-312/gsd/fl.o arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-gsd-3.3.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -Igsd -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c gsd/gsd.c -o build/temp.linux-armv7l-cpython-312/gsd/gsd.o gsd/gsd.c: In function 'gsd_is_entry_valid': gsd/gsd.c:435:33: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long long int'} and 'long long unsigned int' [-Wsign-compare] 435 | if ((entry.location + size) > (uint64_t)handle->file_size) | ^ gsd/gsd.c: In function 'gsd_expand_file_index': gsd/gsd.c:994:44: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 994 | if (bytes_read == -1 || bytes_read != bytes_to_copy) | ^~ gsd/gsd.c:1005:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1005 | if (bytes_written == -1 || bytes_written != bytes_to_copy) | ^~ gsd/gsd.c:1031:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1031 | if (bytes_written == -1 || bytes_written != bytes_to_copy) | ^~ gsd/gsd.c: In function 'gsd_flush_write_buffer': gsd/gsd.c:1119:46: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1119 | if (bytes_written == -1 || bytes_written != handle->write_buffer.size) | ^~ gsd/gsd.c: In function 'gsd_flush_name_buffer': gsd/gsd.c:1211:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1211 | if (bytes_written == -1 || bytes_written != handle->file_names.data.reserved) | ^~ gsd/gsd.c:1244:27: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1244 | if (bytes_written != (handle->file_names.data.reserved - old_size)) | ^~ gsd/gsd.c: In function 'gsd_initialize_handle': gsd/gsd.c:1507:40: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1507 | if (bytes_read == -1 || bytes_read != namelist_n_bytes) | ^~ gsd/gsd.c: In function 'gsd_flush': gsd/gsd.c:1993:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1993 | if (bytes_written == -1 || bytes_written != bytes_to_write) | ^~ gsd/gsd.c: In function 'gsd_write_chunk': gsd/gsd.c:2126:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 2126 | if (bytes_written == -1 || bytes_written != size) | ^~ gsd/gsd.c: In function 'gsd_read_chunk': gsd/gsd.c:2281:34: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long long int'} and 'long long unsigned int' [-Wsign-compare] 2281 | if ((chunk->location + size) > (uint64_t)handle->file_size) | ^ gsd/gsd.c:2287:40: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 2287 | if (bytes_read == -1 || bytes_read != size) | ^~ gsd/gsd.c: In function 'gsd_upgrade': gsd/gsd.c:2471:54: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare] 2471 | if (bytes_written == -1 || bytes_written != sizeof(struct gsd_index_entry) * buf.size) | ^~ gsd/gsd.c:2526:54: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 2526 | if (bytes_written == -1 || bytes_written != new_name_buf.reserved) | ^~ arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-gsd-3.3.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-312/gsd/fl.o build/temp.linux-armv7l-cpython-312/gsd/gsd.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-312/gsd/fl.cpython-312-arm-linux-gnueabihf.so installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/gsd copying build/lib.linux-armv7l-cpython-312/gsd/pygsd.py -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/fl.pyx -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/version.py -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/__main__.py -> build/bdist.linux-armv7l/wheel/./gsd creating build/bdist.linux-armv7l/wheel/gsd/test copying build/lib.linux-armv7l-cpython-312/gsd/test/conftest.py -> build/bdist.linux-armv7l/wheel/./gsd/test copying build/lib.linux-armv7l-cpython-312/gsd/test/test_fl.py -> build/bdist.linux-armv7l/wheel/./gsd/test copying build/lib.linux-armv7l-cpython-312/gsd/test/test_largefile.py -> build/bdist.linux-armv7l/wheel/./gsd/test copying build/lib.linux-armv7l-cpython-312/gsd/test/test_hoomd.py -> build/bdist.linux-armv7l/wheel/./gsd/test copying build/lib.linux-armv7l-cpython-312/gsd/test/pytest.ini -> build/bdist.linux-armv7l/wheel/./gsd/test copying build/lib.linux-armv7l-cpython-312/gsd/test/test_gsd_v1.gsd -> build/bdist.linux-armv7l/wheel/./gsd/test copying build/lib.linux-armv7l-cpython-312/gsd/hoomd.py -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/conftest.py -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/fl.c -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/__init__.py -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/fl.cpython-312-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/gsd.c -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/gsd.h -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/libgsd.pxd -> build/bdist.linux-armv7l/wheel/./gsd copying build/lib.linux-armv7l-cpython-312/gsd/pytest_plugin_validate.py -> build/bdist.linux-armv7l/wheel/./gsd running install_egg_info Copying gsd.egg-info to build/bdist.linux-armv7l/wheel/./gsd-3.3.0.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/gsd-3.3.0.dist-info/WHEEL creating '/build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/.tmp-3h4xancu/gsd-3.3.0-cp312-cp312-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'gsd/__init__.py' adding 'gsd/__main__.py' adding 'gsd/conftest.py' adding 'gsd/fl.c' adding 'gsd/fl.cpython-312-arm-linux-gnueabihf.so' adding 'gsd/fl.pyx' adding 'gsd/gsd.c' adding 'gsd/gsd.h' adding 'gsd/hoomd.py' adding 'gsd/libgsd.pxd' adding 'gsd/pygsd.py' adding 'gsd/pytest_plugin_validate.py' adding 'gsd/version.py' adding 'gsd/test/conftest.py' adding 'gsd/test/pytest.ini' adding 'gsd/test/test_fl.py' adding 'gsd/test/test_gsd_v1.gsd' adding 'gsd/test/test_hoomd.py' adding 'gsd/test/test_largefile.py' adding 'gsd-3.3.0.dist-info/LICENSE' adding 'gsd-3.3.0.dist-info/METADATA' adding 'gsd-3.3.0.dist-info/WHEEL' adding 'gsd-3.3.0.dist-info/entry_points.txt' adding 'gsd-3.3.0.dist-info/top_level.txt' adding 'gsd-3.3.0.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Successfully built gsd-3.3.0-cp312-cp312-linux_armv7l.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module debian/rules execute_after_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/python-gsd-3.3.0' doxygen warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 15 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'TCL_SUBST' at line 43 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 152 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 168 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 200 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 232 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 234 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 245 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 266 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 301 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 306 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 307 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 332 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" Doxygen version used: 1.9.8 Notice: Output directory 'devdoc' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/python-gsd-3.3.0/gsd Searching for files in directory /build/reproducible-path/python-gsd-3.3.0/gsd/test Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/python-gsd-3.3.0/gsd/gsd.h... Parsing file /build/reproducible-path/python-gsd-3.3.0/gsd/gsd.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file gsd/gsd.h... Generating file documentation... Generating docs for file gsd/gsd.h... Generating page documentation... Generating group documentation... Generating class documentation... Generating docs for compound gsd_byte_buffer... Generating docs for compound gsd_handle... Generating docs for compound gsd_header... Generating docs for compound gsd_index_buffer... Generating docs for compound gsd_index_entry... Generating docs for compound gsd_name_buffer... Generating docs for compound gsd_name_id_map... Generating docs for compound gsd_name_id_pair... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating graph info page... Generating directory documentation... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class gsd_byte_buffer Generating XML output for class gsd_handle Generating XML output for class gsd_header Generating XML output for class gsd_index_buffer Generating XML output for class gsd_index_entry Generating XML output for class gsd_name_buffer Generating XML output for class gsd_name_id_map Generating XML output for class gsd_name_id_pair Generating XML output for file gsd.h Generate XML output for dir /build/reproducible-path/python-gsd-3.3.0/gsd/ Running plantuml with JAVA... type lookup cache used 139/65536 hits=400 misses=148 symbol lookup cache used 178/65536 hits=560 misses=178 finished... PYTHONPATH=/build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build READTHEDOCS=True sphinx-build -b html doc /build/reproducible-path/python-gsd-3.3.0/.pybuild/html # HTML generator Running Sphinx v7.4.7 loading translations [en]... done /usr/lib/python3/dist-packages/breathe/project.py:116: RemovedInSphinx80Warning: Sphinx 8 will drop support for representing paths as strings. Use "pathlib.Path" or "os.fspath" instead. self._default_build_dir = os.path.dirname(app.doctreedir.rstrip(os.sep)) making output directory... done Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. loading intersphinx inventory 'python' from /usr/share/doc/python3/html/objects.inv... loading intersphinx inventory 'numpy' from /usr/share/doc/python-numpy/html/objects.inv... building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 22 source files that are out of date updating environment: [new config] 22 added, 0 changed, 0 removed reading sources... [ 5%] c-api reading sources... [ 9%] changes reading sources... [ 14%] cli reading sources... [ 18%] community reading sources... [ 23%] contributing reading sources... [ 27%] credits reading sources... [ 32%] file-layer reading sources... [ 36%] fl-examples /usr/lib/python3/dist-packages/IPython/paths.py:69: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' reading sources... [ 41%] hoomd-examples /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms implicit data copy when writing chunk: log/invalid /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' reading sources... [ 45%] index reading sources... [ 50%] indices reading sources... [ 55%] installation reading sources... [ 59%] license reading sources... [ 64%] python-api reading sources... [ 68%] python-module-gsd.fl /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' reading sources... [ 73%] python-module-gsd.hoomd /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' reading sources... [ 77%] python-module-gsd.pygsd reading sources... [ 82%] python-module-gsd.version reading sources... [ 86%] schema-hoomd reading sources... [ 91%] shapes reading sources... [ 95%] specification reading sources... [100%] style /build/reproducible-path/python-gsd-3.3.0/doc/c-api.rst:12: WARNING: Invalid C declaration: Expected identifier in nested name. [error at 0] ^ /build/reproducible-path/python-gsd-3.3.0/doc/c-api.rst:12: WARNING: Invalid C declaration: Expected identifier in nested name. [error at 0] ^ docstring of gsd.fl.GSDFile.chunk_exists:13: ERROR: Error in "highlight" directive: no content permitted. .. highlight:: python with gsd.fl.open(name='file.gsd', mode='w', application="My application", schema="My Schema", schema_version=[1,0]) as f: f.write_chunk(name='chunk1', data=numpy.array([1,2,3,4], dtype=numpy.float32)) f.write_chunk(name='chunk2', data=numpy.array([[5,6],[7,8]], dtype=numpy.float32)) f.end_frame() f.write_chunk(name='chunk1', data=numpy.array([9,10,11,12], dtype=numpy.float32)) f.write_chunk(name='chunk2', data=numpy.array([[13,14],[15,16]], dtype=numpy.float32)) f.end_frame() f = gsd.fl.open(name='file.gsd', mode='r', application="My application", schema="My Schema", schema_version=[1,0]) f.chunk_exists(frame=0, name='chunk1') f.chunk_exists(frame=0, name='chunk2') f.chunk_exists(frame=0, name='chunk3') f.chunk_exists(frame=10, name='chunk1') f.close() docstring of gsd.fl.GSDFile.truncate:10: WARNING: Block quote ends without a blank line; unexpected unindent. docstring of gsd.fl.GSDFile.truncate:14: WARNING: Definition list ends without a blank line; unexpected unindent. docstring of gsd.fl.GSDFile.truncate:19: WARNING: Definition list ends without a blank line; unexpected unindent. looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done copying assets... copying static files... done copying extra files... done copying assets: done writing output... [ 5%] c-api writing output... [ 9%] changes writing output... [ 14%] cli writing output... [ 18%] community writing output... [ 23%] contributing writing output... [ 27%] credits writing output... [ 32%] file-layer writing output... [ 36%] fl-examples writing output... [ 41%] hoomd-examples writing output... [ 45%] index writing output... [ 50%] indices writing output... [ 55%] installation writing output... [ 59%] license writing output... [ 64%] python-api writing output... [ 68%] python-module-gsd.fl writing output... [ 73%] python-module-gsd.hoomd writing output... [ 77%] python-module-gsd.pygsd writing output... [ 82%] python-module-gsd.version writing output... [ 86%] schema-hoomd writing output... [ 91%] shapes writing output... [ 95%] specification writing output... [100%] style /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build/gsd/hoomd.py:docstring of gsd.hoomd.BondData:13: WARNING: 'any' reference target not found: hoomd.State /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build/gsd/hoomd.py:docstring of gsd.hoomd.ConstraintData:11: WARNING: 'any' reference target not found: hoomd.State /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build/gsd/hoomd.py:docstring of gsd.hoomd.ParticleData:11: WARNING: 'any' reference target not found: hoomd.State /build/reproducible-path/python-gsd-3.3.0/doc/schema-hoomd.rst:21: WARNING: 'any' reference target not found: hoomd.State generating indices... genindex py-modindex done writing additional pages... search done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 10 warnings. The HTML pages are in ../../build/reproducible-path/python-gsd-3.3.0/.pybuild/html. make[1]: Leaving directory '/build/reproducible-path/python-gsd-3.3.0' dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build; python3.12 -m pytest /build/reproducible-path/python-gsd-3.3.0/gsd/test ============================= test session starts ============================== platform linux -- Python 3.12.6, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/python-gsd-3.3.0/gsd/test configfile: pytest.ini plugins: typeguard-4.4.1 collected 133 items ../../../gsd/test/test_fl.py ........................................... [ 32%] ..................................... [ 60%] ../../../gsd/test/test_hoomd.py ........................................ [ 90%] .......... [ 97%] ../../../gsd/test/test_largefile.py ... [100%] =============================== warnings summary =============================== ../../../gsd/test/test_largefile.py:15 /build/reproducible-path/python-gsd-3.3.0/gsd/test/test_largefile.py:15: PytestUnknownMarkWarning: Unknown pytest.mark.validate - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html @pytest.mark.validate() test_largefile.py::test_large_n[268435456] /usr/lib/python3/dist-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but test_largefile.py::test_large_n[268435456] returned True, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( test_largefile.py::test_large_n[536870913] /usr/lib/python3/dist-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but test_largefile.py::test_large_n[536870913] returned True, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================= 133 passed, 3 warnings in 124.17s (0:02:04) ================== create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-gsd-doc. If the default is wrong, please use --doc-main-package dh_sphinxdoc -O--buildsystem=pybuild dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-gsd-doc/usr/share/doc/python-gsd-doc/html/_static/copybutton_funcs.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-gsd-doc/usr/share/doc/python-gsd-doc/html/_static/clipboard.min.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-gsd-doc/usr/share/doc/python-gsd-doc/html/_static/copybutton.js dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild debian/rules execute_after_dh_python3 make[1]: Entering directory '/build/reproducible-path/python-gsd-3.3.0' dh_numpy3 make[1]: Leaving directory '/build/reproducible-path/python-gsd-3.3.0' dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: package python-gsd-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python-gsd-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python-gsd-doc' in '../python-gsd-doc_3.3.0-1_all.deb'. dpkg-deb: building package 'python3-gsd' in '../python3-gsd_3.3.0-1_armhf.deb'. dpkg-deb: building package 'python3-gsd-dbgsym' in '../python3-gsd-dbgsym_3.3.0-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../python-gsd_3.3.0-1_armhf.buildinfo dpkg-genchanges --build=binary -O../python-gsd_3.3.0-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from python-gsd-3.3.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/7356 and its subdirectories I: Current time: Thu Nov 7 14:19:54 -12 2024 I: pbuilder-time-stamp: 1731032394 Fri Nov 8 02:20:02 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt32c-armhf-rb.debian.net. Fri Nov 8 02:20:02 UTC 2024 I: Preparing to do remote build '2' on virt32c-armhf-rb.debian.net. Fri Nov 8 02:26:36 UTC 2024 I: Deleting $TMPDIR on virt32c-armhf-rb.debian.net. Fri Nov 8 02:26:39 UTC 2024 I: python-gsd_3.3.0-1_armhf.changes: Format: 1.8 Date: Fri, 05 Jul 2024 18:19:20 +0200 Source: python-gsd Binary: python-gsd-doc python3-gsd python3-gsd-dbgsym Architecture: all armhf Version: 3.3.0-1 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Drew Parsons Description: python-gsd-doc - native file format for HOOMD-blue (documentation) python3-gsd - native file format for HOOMD-blue (Python 3 module) Changes: python-gsd (3.3.0-1) unstable; urgency=medium . * New upstream release. - update versioned Build-Depends: python3-numpy (>= 1:1.19.0~) (compatible with numpy 2) - Build-Depends-Indep: python3-sphinx-copybutton * update debian patch docs_local_scripts.patch to link local docs (intersphinx) for python, numpy. Build-Depends-Indep: python-numpy-doc * debian patch docs_build.patch removes doc components which are not available (sphinxcontrib.googleanalytics is not packaged, and would introduce privacy issues if used anyway) * run doxygen manually to prepare devdoc (API docs) * use pytest to run build-time tests Toplevel test config fails so provide path to tests. * run debian/tests over all supported python versions * run dh_numpy3 after dh_python3 * register doc/_templates/page.html in debian/missing-sources Checksums-Sha1: 87e54e0d3d6b573c412fd5c72319c256950d3b7b 130376 python-gsd-doc_3.3.0-1_all.deb 2e40fa6869fffa8dddb4b86b7f7c7159daf0bd2a 11370 python-gsd_3.3.0-1_armhf.buildinfo 647488f36234ce2e906cb87cb708e74d583a0bd1 341948 python3-gsd-dbgsym_3.3.0-1_armhf.deb e5f13a635808a348706637d569938d3079aebb8a 192832 python3-gsd_3.3.0-1_armhf.deb Checksums-Sha256: d2e28dc738a717d80b999dd0a03bbc8d89f0cb0e3a36ef67817522c49c74de69 130376 python-gsd-doc_3.3.0-1_all.deb 709a5e50da6c98997d5e50ea274866d3be48ece0d28cb6ee23b546b63834fab4 11370 python-gsd_3.3.0-1_armhf.buildinfo 642aee4c14f842f6aa79336020e0077a9c60a32f2db7a7f0bd8fb13949c773e5 341948 python3-gsd-dbgsym_3.3.0-1_armhf.deb cfc068296f9f2a62a942e0fc3da73f838684b494c4f51b5bf4f9cd42647f5d53 192832 python3-gsd_3.3.0-1_armhf.deb Files: 65f634fc9ab5bf4534c3f82f74d0b2d5 130376 doc optional python-gsd-doc_3.3.0-1_all.deb b85f8e94fab45cd43eeb632c5c0a8bc4 11370 python optional python-gsd_3.3.0-1_armhf.buildinfo 0e85564fbc2a2948b86f4428f8aa4896 341948 debug optional python3-gsd-dbgsym_3.3.0-1_armhf.deb cf3ff83eb537b674e1106d3f6078d9fa 192832 python optional python3-gsd_3.3.0-1_armhf.deb Fri Nov 8 02:26:40 UTC 2024 I: diffoscope 282 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_8-11512.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.RfZgUqgp/python-gsd_3.3.0-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.RfZgUqgp/python-gsd_3.3.0-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.RfZgUqgp/python-gsd_3.3.0-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.RfZgUqgp/b1/python-gsd_3.3.0-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.RfZgUqgp/b2/python-gsd_3.3.0-1_armhf.changes ## close_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 0.417s) 0.187s 8 calls diff 0.148s 11 calls js-beautify 0.047s 6 calls xz 0.019s 11 calls html2text 0.008s 3 calls cmp 0.008s 3 calls cmp (external) 0.001s 15 calls cmp (internal) ## compare_files (cumulative) (total time: 11.301s) 2.359s 1 call abc.DotChangesFile 2.328s 1 call abc.DebFile 2.306s 2 calls abc.XzFile 2.220s 1 call abc.DebDataTarFile 1.961s 1 call abc.JavaScriptFile 0.087s 1 call abc.HtmlFile 0.031s 1 call abc.TarFile 0.007s 1 call abc.Md5sumsFile ## container_extract (total time: 0.087s) 0.047s 6 calls diffoscope.comparators.xz.XzContainer 0.035s 144 calls diffoscope.comparators.deb.DebTarContainer 0.003s 6 calls diffoscope.comparators.tar.TarContainer 0.003s 8 calls diffoscope.comparators.deb.DebContainer ## diff (total time: 0.056s) 0.056s 26 calls linediff ## has_same_content_as (total time: 0.011s) 0.005s 3 calls abc.DebFile 0.003s 1 call abc.DebDataTarFile 0.001s 4 calls diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 2 calls abc.TextFile 0.000s 2 calls abc.Md5sumsFile 0.000s 2 calls abc.XzFile 0.000s 1 call abc.HtmlFile 0.000s 1 call abc.DotChangesFile 0.000s 1 call abc.TarFile 0.000s 1 call abc.JavaScriptFile ## main (total time: 3.110s) 3.110s 2 calls outputs 0.000s 1 call cleanup ## open_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer ## output (total time: 0.309s) 0.291s 1 call html 0.018s 1 call text 0.000s 1 call json ## recognizes (total time: 0.117s) 0.059s 578 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.034s 12 calls diffoscope.comparators.binary.FilesystemFile 0.014s 260 calls diffoscope.comparators.utils.archive.ArchiveMember 0.011s 162 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.073s) 0.073s 18 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 3.458s CPU time consumed: 3.551s Fri Nov 8 02:26:44 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Fri Nov 8 02:26:44 UTC 2024 E: python-gsd failed to build reproducibly in trixie on armhf. Fri Nov 8 02:26:45 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Nov 8 02:26:45 UTC 2024 I: Submitting 12K b1/python-gsd_3.3.0-1_armhf.buildinfo.asc Fri Nov 8 02:26:46 UTC 2024 I: Submitting 12K b2/python-gsd_3.3.0-1_armhf.buildinfo.asc Fri Nov 8 02:26:47 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Nov 8 02:26:47 UTC 2024 I: Done submitting .buildinfo files. Fri Nov 8 02:26:47 UTC 2024 I: Removing signed python-gsd_3.3.0-1_armhf.buildinfo.asc files: removed './b1/python-gsd_3.3.0-1_armhf.buildinfo.asc' removed './b2/python-gsd_3.3.0-1_armhf.buildinfo.asc'