Wed Nov 27 02:50:34 UTC 2024 I: starting to build pairtools/trixie/armhf on jenkins on '2024-11-27 02:50' Wed Nov 27 02:50:34 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_19/4360/console.log Wed Nov 27 02:50:34 UTC 2024 I: Downloading source for trixie/pairtools=1.1.0-1 --2024-11-27 02:50:34-- http://deb.debian.org/debian/pool/main/p/pairtools/pairtools_1.1.0-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2423 (2.4K) [text/prs.lines.tag] Saving to: ‘pairtools_1.1.0-1.dsc’ 0K .. 100% 260M=0s 2024-11-27 02:50:34 (260 MB/s) - ‘pairtools_1.1.0-1.dsc’ saved [2423/2423] Wed Nov 27 02:50:34 UTC 2024 I: pairtools_1.1.0-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: pairtools Binary: python3-pairtools, python3-pairtools-examples Architecture: any Version: 1.1.0-1 Maintainer: Debian Med Packaging Team Uploaders: Antoni Villalonga Homepage: https://github.com/mirnylab/pairtools Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/pairtools Vcs-Git: https://salsa.debian.org/med-team/pairtools.git Testsuite: autopkgtest Testsuite-Triggers: python-is-python3, python3-pytest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev, cython3, python-is-python3, python3-setuptools, python3-bioframe, python3-click, python3-exceptiongroup, python3-numpy, python3-pandas, python3-pysam (>= 0.20.0+ds-3~), python3-pytest , python3-scipy, libhts-dev, python3-yaml Package-List: python3-pairtools deb python optional arch=any python3-pairtools-examples deb python optional arch=any Checksums-Sha1: 7a19ae765379467605bb02b1b00e0395b200ff57 1418168 pairtools_1.1.0.orig.tar.gz f597e3273ed25a1e0c8ed29b09fbd3c9d4ca6e51 11084 pairtools_1.1.0-1.debian.tar.xz Checksums-Sha256: cd495d1352490f770a25bec45296fd13ae2fa1875d772acfa134056bedf6aaf0 1418168 pairtools_1.1.0.orig.tar.gz 8419af9a27842735eb911040ab430c5b2e78bb20310091329890b565cd12ba41 11084 pairtools_1.1.0-1.debian.tar.xz Files: a8628e1e193f13e45c64a815f796a0a3 1418168 pairtools_1.1.0.orig.tar.gz c35cd6c8d20ce1a42ae57b4f804acc3a 11084 pairtools_1.1.0-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmc7vqwRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBq6eA//QFa2qR12N2QyBPTz54zXZ1tNOOw/MRlQ FWBxrkasAOoz2qxkzFaXGr2dhVUUPMCbtYmj8CEMchyJcgW+qxOtCExRllY78nZy KCc1XuWPP8U/SM2PE3DhfnxNeiMPqG493u22YAqLdPl1yh9OH3eKN9+KyBsmeLgm 4v9/9u7dO6dIARCNS2L136Hk6LT2FoOv+0KRuNpOTAmTy+uqUHptsrNqDXccKw/D w0jOPN7c18ygrY6pWwbj4uZBERzZjtkC0VWbjk9UQ4Tq2DczHSa4xHOZF9SJBZCI K2Z/6zofkdW+eDUoQQnmveUr9ORZEZK3IPDtfG8Nj3GaJcNMGPUnrlrleZETMJLz SghSd6TYPqxTjPMnJwRM6wV+DVw/WvZl/A0ZJm4cUHeDvF6IycCAIklY2pMeuikt tQta5X0T6s+KiYvACfNXdiQ9Ar12JEXBNbGL+k0Z0bb+s8g+c29/zKJ+RqKdN5Nb 8I2yzOjLqEdqISNPwseCb9XJxwLAqpqJav2KbzpN71K18Ibn+uFaiPjbJXJCyhuS w9Wtu1OPE2pDoMUDv/AGZ0EJWa5/3lL9nYAzSYG5oXDnixk/37fkkvEBlo43AcyW M+lMsVs5fkzSE+ivhyzgwCuexlleRWkNmvzxk0cXFst/O5UDH7vPm83vfsacuWrY s/h9OMfUu3g= =cJpX -----END PGP SIGNATURE----- Wed Nov 27 02:50:34 UTC 2024 I: Checking whether the package is not for us Wed Nov 27 02:50:34 UTC 2024 I: Starting 1st build on remote node virt64c-armhf-rb.debian.net. Wed Nov 27 02:50:34 UTC 2024 I: Preparing to do remote build '1' on virt64c-armhf-rb.debian.net. Wed Nov 27 02:59:05 UTC 2024 I: Deleting $TMPDIR on virt64c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Nov 26 14:50:41 -12 2024 I: pbuilder-time-stamp: 1732675841 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pairtools_1.1.0-1.dsc] I: copying [./pairtools_1.1.0.orig.tar.gz] I: copying [./pairtools_1.1.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Nov 18 22:24:44 2024 gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A gpgv: issuer "tchet@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./pairtools_1.1.0-1.dsc: no acceptable signature found dpkg-source: info: extracting pairtools in pairtools-1.1.0 dpkg-source: info: unpacking pairtools_1.1.0.orig.tar.gz dpkg-source: info: unpacking pairtools_1.1.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying makefile dpkg-source: info: applying fix-spelling dpkg-source: info: applying tests-to-python3 dpkg-source: info: applying fix-pysam-ftbfs.patch dpkg-source: info: applying do-not-run-coverage.patch dpkg-source: info: applying no_install_depends_cython.patch dpkg-source: info: applying remove_pipes.patch dpkg-source: info: applying syntax_warning.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/21022/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='44fe7e34d08643c78e4d899412cbc4c7' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='21022' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cSP4Cyxu/pbuilderrc_WlUC --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cSP4Cyxu/b1 --logfile b1/build.log pairtools_1.1.0-1.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64c 6.1.0-28-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/21022/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev, cython3, python-is-python3, python3-setuptools, python3-bioframe, python3-click, python3-exceptiongroup, python3-numpy, python3-pandas, python3-pysam (>= 0.20.0+ds-3~), python3-pytest, python3-scipy, libhts-dev, python3-yaml dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python-is-python3; however: Package python-is-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-bioframe; however: Package python3-bioframe is not installed. pbuilder-satisfydepends-dummy depends on python3-click; however: Package python3-click is not installed. pbuilder-satisfydepends-dummy depends on python3-exceptiongroup; however: Package python3-exceptiongroup is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-pysam (>= 0.20.0+ds-3~); however: Package python3-pysam is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on libhts-dev; however: Package libhts-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-yaml; however: Package python3-yaml is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} comerr-dev{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} krb5-multidev{a} libarchive-zip-perl{a} libblas3{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libelf1t64{a} libevent-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libharfbuzz0b{a} libhts-dev{a} libhts3t64{a} libhtscodecs2{a} libicu72{a} libidn2-dev{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} liblerc4{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libnghttp3-dev{a} libngtcp2-16{a} libngtcp2-crypto-gnutls-dev{a} libngtcp2-crypto-gnutls8{a} libngtcp2-dev{a} libnsl2{a} libopenjp2-7{a} libp11-kit-dev{a} libpipeline1{a} libpkgconf3{a} libpng16-16t64{a} libpsl-dev{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libtasn1-6-dev{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libunbound8{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libyaml-0-2{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} netbase{a} nettle-dev{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python-is-python3{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-bioframe{a} python3-brotli{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-exceptiongroup{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-pyparsing{a} python3-pysam{a} python3-pytest{a} python3-requests{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sympy{a} python3-tk{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules libtasn1-doc lynx publicsuffix python3-bottleneck python3-bs4 python3-cssselect python3-html5lib python3-jinja2 python3-numexpr python3-odf python3-olefile python3-openpyxl python3-pygments python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 222 newly installed, 0 to remove and 0 not upgraded. Need to get 129 MB of archives. After unpacking 536 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.12-minimal armhf 3.12.7-3 [800 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.12-minimal armhf 3.12.7-3 [1808 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.1-1+b1 [22.3 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 12 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3+b1 [71.3 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libnsl2 armhf 1.3.0-3+b3 [35.0 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-5 [146 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libpython3.12-stdlib armhf 3.12.7-3 [1819 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf python3.12 armhf 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.3.2-2 [1348 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-11 [83.6 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-2 [723 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf libtcl8.6 armhf 8.6.15+dfsg-2 [934 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf libpng16-16t64 armhf 1.6.44-2 [263 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf fontconfig-config armhf 2.15.0-1.1+b1 [318 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf libfontconfig1 armhf 2.15.0-1.1+b1 [371 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.5-1 [26.4 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.10-2 [337 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.10-2 [750 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libxrender1 armhf 1:0.9.10-1.1+b2 [25.0 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libxft2 armhf 2.3.6-1+b2 [46.5 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b2 [45.2 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf x11-common all 1:7.7+23.1 [216 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf libxss1 armhf 1:1.2.3-1+b2 [16.4 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libtk8.6 armhf 8.6.15-1 [697 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-7 [481 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf blt armhf 2.5.3+dfsg-7 [6024 B] Get: 61 http://deb.debian.org/debian trixie/main armhf comerr-dev armhf 2.1-1.47.1-1+b1 [54.3 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf cython3 armhf 3.0.11+dfsg-1+b1 [2812 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-8 [517 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 69 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5+b1 [9088 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf python3-typeguard all 4.4.1-1 [37.0 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf python3-inflect all 7.3.1-2 [32.4 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf python3-jaraco.context all 6.0.0-1 [7984 B] Get: 83 http://deb.debian.org/debian trixie/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 84 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 74.1.2-2 [213 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf python3-zipp all 3.21.0-1 [10.6 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf python3-setuptools all 74.1.2-2 [736 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf dh-python all 6.20241024 [109 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf fonts-lyx all 2.4.2.1-1 [190 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf libgssrpc4t64 armhf 1.21.3-3 [52.5 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf libkadm5clnt-mit12 armhf 1.21.3-3 [37.0 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf libkdb5-10t64 armhf 1.21.3-3 [37.1 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libkadm5srv-mit12 armhf 1.21.3-3 [46.7 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf krb5-multidev armhf 1.21.3-3 [126 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libblas3 armhf 3.12.0-3+b1 [111 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf libbrotli-dev armhf 1.1.0-2+b6 [293 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf libbz2-dev armhf 1.0.8-6 [28.7 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8 [18.2 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8 [50.2 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf libldap-2.5-0 armhf 2.5.18+dfsg-3+b1 [163 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf libnghttp2-14 armhf 1.64.0-1 [62.9 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf libnghttp3-9 armhf 1.4.0-1+b1 [55.0 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf libngtcp2-16 armhf 1.6.0-1 [118 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf libngtcp2-crypto-gnutls8 armhf 1.6.0-1 [17.1 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB] Get: 105 http://deb.debian.org/debian trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf libcurl3t64-gnutls armhf 8.11.0-1 [310 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-10+b1 [164 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf libunbound8 armhf 1.22.0-1 [539 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf libgnutls-dane0t64 armhf 3.8.8-2 [440 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf libgnutls-openssl27t64 armhf 3.8.8-2 [440 kB] Get: 112 http://deb.debian.org/debian trixie/main armhf libidn2-dev armhf 2.3.7-2+b1 [119 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf libp11-kit-dev armhf 0.25.5-2+b1 [208 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf libtasn1-6-dev armhf 4.19.0-3+b3 [93.2 kB] Get: 115 http://deb.debian.org/debian trixie/main armhf libgmpxx4ldbl armhf 2:6.3.0+dfsg-2+b2 [328 kB] Get: 116 http://deb.debian.org/debian trixie/main armhf libgmp-dev armhf 2:6.3.0+dfsg-2+b2 [593 kB] Get: 117 http://deb.debian.org/debian trixie/main armhf nettle-dev armhf 3.10-1+b1 [1313 kB] Get: 118 http://deb.debian.org/debian trixie/main armhf libgnutls28-dev armhf 3.8.8-2 [1328 kB] Get: 119 http://deb.debian.org/debian trixie/main armhf libkrb5-dev armhf 1.21.3-3 [15.8 kB] Get: 120 http://deb.debian.org/debian trixie/main armhf libldap-dev armhf 2.5.18+dfsg-3+b1 [282 kB] Get: 121 http://deb.debian.org/debian trixie/main armhf libpkgconf3 armhf 1.8.1-4 [31.8 kB] Get: 122 http://deb.debian.org/debian trixie/main armhf pkgconf-bin armhf 1.8.1-4 [29.2 kB] Get: 123 http://deb.debian.org/debian trixie/main armhf pkgconf armhf 1.8.1-4 [26.1 kB] Get: 124 http://deb.debian.org/debian trixie/main armhf libnghttp2-dev armhf 1.64.0-1 [103 kB] Get: 125 http://deb.debian.org/debian trixie/main armhf libnghttp3-dev armhf 1.4.0-1+b1 [79.8 kB] Get: 126 http://deb.debian.org/debian trixie/main armhf libngtcp2-crypto-gnutls-dev armhf 1.6.0-1 [22.1 kB] Get: 127 http://deb.debian.org/debian trixie/main armhf libngtcp2-dev armhf 1.6.0-1 [168 kB] Get: 128 http://deb.debian.org/debian trixie/main armhf libpsl-dev armhf 0.21.2-1.1+b1 [76.8 kB] Get: 129 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] Get: 130 http://deb.debian.org/debian trixie/main armhf librtmp-dev armhf 2.4+20151223.gitfa8646d.1-2+b5 [63.6 kB] Get: 131 http://deb.debian.org/debian trixie/main armhf libssl-dev armhf 3.3.2-2 [2385 kB] Get: 132 http://deb.debian.org/debian trixie/main armhf libssh2-1-dev armhf 1.11.1-1 [378 kB] Get: 133 http://deb.debian.org/debian trixie/main armhf libzstd-dev armhf 1.5.6+dfsg-1+b1 [327 kB] Get: 134 http://deb.debian.org/debian trixie/main armhf libcurl4-gnutls-dev armhf 8.11.0-1 [434 kB] Get: 135 http://deb.debian.org/debian trixie/main armhf libdeflate0 armhf 1.22-1 [36.3 kB] Get: 136 http://deb.debian.org/debian trixie/main armhf libdeflate-dev armhf 1.22-1 [44.5 kB] Get: 137 http://deb.debian.org/debian trixie/main armhf libexpat1-dev armhf 2.6.4-1 [140 kB] Get: 138 http://deb.debian.org/debian trixie/main armhf libfribidi0 armhf 1.0.15-1 [70.0 kB] Get: 139 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14.2.0-8 [263 kB] Get: 140 http://deb.debian.org/debian trixie/main armhf libglib2.0-0t64 armhf 2.82.2-2 [1326 kB] Get: 141 http://deb.debian.org/debian trixie/main armhf libgraphite2-3 armhf 1.3.14-2+b1 [63.1 kB] Get: 142 http://deb.debian.org/debian trixie/main armhf libharfbuzz0b armhf 10.0.1-1 [418 kB] Get: 143 http://deb.debian.org/debian trixie/main armhf libhtscodecs2 armhf 1.6.1-1 [63.1 kB] Get: 144 http://deb.debian.org/debian trixie/main armhf libhts3t64 armhf 1.20+ds-2 [401 kB] Get: 145 http://deb.debian.org/debian trixie/main armhf liblzma-dev armhf 5.6.3-1+b1 [304 kB] Get: 146 http://deb.debian.org/debian trixie/main armhf libhts-dev armhf 1.20+ds-2 [1625 kB] Get: 147 http://deb.debian.org/debian trixie/main armhf libimagequant0 armhf 2.18.0-1+b2 [30.5 kB] Get: 148 http://deb.debian.org/debian trixie/main armhf libjbig0 armhf 2.1-6.1+b2 [27.3 kB] Get: 149 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-3+b1 [145 kB] Get: 150 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 151 http://deb.debian.org/debian trixie/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 152 http://deb.debian.org/debian trixie/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 153 http://deb.debian.org/debian trixie/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 154 http://deb.debian.org/debian trixie/main armhf liblapack3 armhf 3.12.0-3+b1 [1828 kB] Get: 155 http://deb.debian.org/debian trixie/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1+b2 [25.6 kB] Get: 156 http://deb.debian.org/debian trixie/main armhf liblcms2-2 armhf 2.16-2 [131 kB] Get: 157 http://deb.debian.org/debian trixie/main armhf liblerc4 armhf 4.0.0+ds-5 [146 kB] Get: 158 http://deb.debian.org/debian trixie/main armhf libopenjp2-7 armhf 2.5.0-2+b4 [179 kB] Get: 159 http://deb.debian.org/debian trixie/main armhf libpython3.12t64 armhf 3.12.7-3 [1848 kB] Get: 160 http://deb.debian.org/debian trixie/main armhf libpython3.12-dev armhf 3.12.7-3 [3808 kB] Get: 161 http://deb.debian.org/debian trixie/main armhf libpython3-dev armhf 3.12.6-1 [9952 B] Get: 162 http://deb.debian.org/debian trixie/main armhf libpython3-all-dev armhf 3.12.6-1 [1064 B] Get: 163 http://deb.debian.org/debian trixie/main armhf libqhull-r8.0 armhf 2020.2-6+b2 [220 kB] Get: 164 http://deb.debian.org/debian trixie/main armhf libraqm0 armhf 0.10.1-1+b2 [11.8 kB] Get: 165 http://deb.debian.org/debian trixie/main armhf libsharpyuv0 armhf 1.4.0-0.1+b1 [111 kB] Get: 166 http://deb.debian.org/debian trixie/main armhf libwebp7 armhf 1.4.0-0.1+b1 [266 kB] Get: 167 http://deb.debian.org/debian trixie/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB] Get: 168 http://deb.debian.org/debian trixie/main armhf libwebpdemux2 armhf 1.4.0-0.1+b1 [110 kB] Get: 169 http://deb.debian.org/debian trixie/main armhf libwebpmux3 armhf 1.4.0-0.1+b1 [120 kB] Get: 170 http://deb.debian.org/debian trixie/main armhf libxslt1.1 armhf 1.1.35-1.1+b1 [212 kB] Get: 171 http://deb.debian.org/debian trixie/main armhf libyaml-0-2 armhf 0.2.5-1+b2 [45.4 kB] Get: 172 http://deb.debian.org/debian trixie/main armhf python-is-python3 all 3.11.4-1 [3044 B] Get: 173 http://deb.debian.org/debian trixie/main armhf python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 174 http://deb.debian.org/debian trixie/main armhf python3-all armhf 3.12.6-1 [1040 B] Get: 175 http://deb.debian.org/debian trixie/main armhf python3.12-dev armhf 3.12.7-3 [505 kB] Get: 176 http://deb.debian.org/debian trixie/main armhf python3-dev armhf 3.12.6-1 [26.1 kB] Get: 177 http://deb.debian.org/debian trixie/main armhf python3-all-dev armhf 3.12.6-1 [1068 B] Get: 178 http://deb.debian.org/debian trixie/main armhf python3-appdirs all 1.4.4-4 [12.5 kB] Get: 179 http://deb.debian.org/debian trixie/main armhf python3-attr all 23.2.0-2 [65.5 kB] Get: 180 http://deb.debian.org/debian trixie/main armhf python3-dateutil all 2.9.0-3 [79.3 kB] Get: 181 http://deb.debian.org/debian trixie/main armhf python3-pil armhf 10.4.0-1+b1 [478 kB] Get: 182 http://deb.debian.org/debian trixie/main armhf python3.12-tk armhf 3.12.7-3 [109 kB] Get: 183 http://deb.debian.org/debian trixie/main armhf python3.13-tk armhf 3.13.0-2 [99.7 kB] Get: 184 http://deb.debian.org/debian trixie/main armhf python3-tk armhf 3.12.7-1 [9444 B] Get: 185 http://deb.debian.org/debian trixie/main armhf python3-pil.imagetk armhf 10.4.0-1+b1 [79.3 kB] Get: 186 http://deb.debian.org/debian trixie/main armhf python3-pyparsing all 3.1.2-1 [146 kB] Get: 187 http://deb.debian.org/debian trixie/main armhf python3-numpy armhf 1:1.26.4+ds-12 [3676 kB] Get: 188 http://deb.debian.org/debian trixie/main armhf python3-contourpy armhf 1.3.0-2+b1 [217 kB] Get: 189 http://deb.debian.org/debian trixie/main armhf python3-cycler all 0.12.1-1 [9496 B] Get: 190 http://deb.debian.org/debian trixie/main armhf python3-brotli armhf 1.1.0-2+b6 [302 kB] Get: 191 http://deb.debian.org/debian trixie/main armhf python3-tz all 2024.1-2 [30.9 kB] Get: 192 http://deb.debian.org/debian trixie/main armhf python3-six all 1.16.0-7 [16.4 kB] Get: 193 http://deb.debian.org/debian trixie/main armhf python3-fs all 2.4.16-4 [95.4 kB] Get: 194 http://deb.debian.org/debian trixie/main armhf python3-lxml armhf 5.3.0-1+b1 [1468 kB] Get: 195 http://deb.debian.org/debian trixie/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b5 [24.0 kB] Get: 196 http://deb.debian.org/debian trixie/main armhf python3-decorator all 5.1.1-5 [15.1 kB] Get: 197 http://deb.debian.org/debian trixie/main armhf python3-scipy armhf 1.13.1-6 [17.6 MB] Get: 198 http://deb.debian.org/debian trixie/main armhf python3-mpmath all 1.3.0-1 [419 kB] Get: 199 http://deb.debian.org/debian trixie/main armhf python3-sympy all 1.13.3-1 [4147 kB] Get: 200 http://deb.debian.org/debian trixie/main armhf python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB] Get: 201 http://deb.debian.org/debian trixie/main armhf unicode-data all 15.1.0-1 [8547 kB] Get: 202 http://deb.debian.org/debian trixie/main armhf python3-fonttools armhf 4.55.0-3 [1529 kB] Get: 203 http://deb.debian.org/debian trixie/main armhf python3-kiwisolver armhf 1.4.7-2+b1 [64.9 kB] Get: 204 http://deb.debian.org/debian trixie/main armhf python3-packaging all 24.2-1 [55.3 kB] Get: 205 http://deb.debian.org/debian trixie/main armhf python3-matplotlib armhf 3.8.3-3+b1 [5579 kB] Get: 206 http://deb.debian.org/debian trixie/main armhf python3-pandas-lib armhf 2.2.3+dfsg-5+b1 [6440 kB] Get: 207 http://deb.debian.org/debian trixie/main armhf python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 208 http://deb.debian.org/debian trixie/main armhf python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 209 http://deb.debian.org/debian trixie/main armhf python3-charset-normalizer armhf 3.4.0-1+b1 [126 kB] Get: 210 http://deb.debian.org/debian trixie/main armhf python3-idna all 3.8-2 [41.6 kB] Get: 211 http://deb.debian.org/debian trixie/main armhf python3-urllib3 all 2.0.7-2 [111 kB] Get: 212 http://deb.debian.org/debian trixie/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 213 http://deb.debian.org/debian trixie/main armhf python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 214 http://deb.debian.org/debian trixie/main armhf python3-bioframe all 0.4.1-1 [71.6 kB] Get: 215 http://deb.debian.org/debian trixie/main armhf python3-colorama all 0.4.6-4 [36.2 kB] Get: 216 http://deb.debian.org/debian trixie/main armhf python3-click all 8.1.7-2 [94.3 kB] Get: 217 http://deb.debian.org/debian trixie/main armhf python3-exceptiongroup all 1.2.2-1 [19.7 kB] Get: 218 http://deb.debian.org/debian trixie/main armhf python3-iniconfig all 1.1.1-2 [6396 B] Get: 219 http://deb.debian.org/debian trixie/main armhf python3-pluggy all 1.5.0-1 [26.9 kB] Get: 220 http://deb.debian.org/debian trixie/main armhf python3-pysam armhf 0.22.1+ds-2+b2 [3755 kB] Get: 221 http://deb.debian.org/debian trixie/main armhf python3-pytest all 8.3.3-1 [249 kB] Get: 222 http://deb.debian.org/debian trixie/main armhf python3-yaml armhf 6.0.2-1+b1 [158 kB] Fetched 129 MB in 4s (34.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.7-3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.4-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_armhf.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:armhf (3.12.7-3) ... Setting up libexpat1:armhf (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20010 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_armhf.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../04-libkrb5support0_1.21.3-3_armhf.deb ... Unpacking libkrb5support0:armhf (1.21.3-3) ... Selecting previously unselected package libcom-err2:armhf. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_armhf.deb ... Unpacking libcom-err2:armhf (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../06-libk5crypto3_1.21.3-3_armhf.deb ... Unpacking libk5crypto3:armhf (1.21.3-3) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../07-libkeyutils1_1.6.3-4_armhf.deb ... Unpacking libkeyutils1:armhf (1.6.3-4) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../08-libkrb5-3_1.21.3-3_armhf.deb ... Unpacking libkrb5-3:armhf (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:armhf. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:armhf. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_armhf.deb ... Unpacking libnsl2:armhf (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../14-libreadline8t64_8.2-5_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:armhf. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_armhf.deb ... Unpacking libpython3.12-stdlib:armhf (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_armhf.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21072 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.6-1_armhf.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.3.2-2_armhf.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../005-libmagic1t64_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-3+b1_armhf.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.22.5-2_armhf.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../008-libuchardet0_0.0.8-1+b2_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-5_armhf.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.40.2-11_armhf.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../011-libpipeline1_1.5.8-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.13.0-1_armhf.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../013-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../014-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../015-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../016-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../017-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libtcl8.6:armhf. Preparing to unpack .../018-libtcl8.6_8.6.15+dfsg-2_armhf.deb ... Unpacking libtcl8.6:armhf (8.6.15+dfsg-2) ... Selecting previously unselected package libbrotli1:armhf. Preparing to unpack .../019-libbrotli1_1.1.0-2+b6_armhf.deb ... Unpacking libbrotli1:armhf (1.1.0-2+b6) ... Selecting previously unselected package libpng16-16t64:armhf. Preparing to unpack .../020-libpng16-16t64_1.6.44-2_armhf.deb ... Unpacking libpng16-16t64:armhf (1.6.44-2) ... Selecting previously unselected package libfreetype6:armhf. Preparing to unpack .../021-libfreetype6_2.13.3+dfsg-1_armhf.deb ... Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../022-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../023-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../024-fontconfig-config_2.15.0-1.1+b1_armhf.deb ... Unpacking fontconfig-config (2.15.0-1.1+b1) ... Selecting previously unselected package libfontconfig1:armhf. Preparing to unpack .../025-libfontconfig1_2.15.0-1.1+b1_armhf.deb ... Unpacking libfontconfig1:armhf (2.15.0-1.1+b1) ... Selecting previously unselected package libxau6:armhf. Preparing to unpack .../026-libxau6_1%3a1.0.11-1_armhf.deb ... Unpacking libxau6:armhf (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:armhf. Preparing to unpack .../027-libxdmcp6_1%3a1.1.5-1_armhf.deb ... Unpacking libxdmcp6:armhf (1:1.1.5-1) ... Selecting previously unselected package libxcb1:armhf. Preparing to unpack .../028-libxcb1_1.17.0-2+b1_armhf.deb ... Unpacking libxcb1:armhf (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../029-libx11-data_2%3a1.8.10-2_all.deb ... Unpacking libx11-data (2:1.8.10-2) ... Selecting previously unselected package libx11-6:armhf. Preparing to unpack .../030-libx11-6_2%3a1.8.10-2_armhf.deb ... Unpacking libx11-6:armhf (2:1.8.10-2) ... Selecting previously unselected package libxrender1:armhf. Preparing to unpack .../031-libxrender1_1%3a0.9.10-1.1+b2_armhf.deb ... Unpacking libxrender1:armhf (1:0.9.10-1.1+b2) ... Selecting previously unselected package libxft2:armhf. Preparing to unpack .../032-libxft2_2.3.6-1+b2_armhf.deb ... Unpacking libxft2:armhf (2.3.6-1+b2) ... Selecting previously unselected package libxext6:armhf. Preparing to unpack .../033-libxext6_2%3a1.3.4-1+b2_armhf.deb ... Unpacking libxext6:armhf (2:1.3.4-1+b2) ... Selecting previously unselected package x11-common. Preparing to unpack .../034-x11-common_1%3a7.7+23.1_all.deb ... Unpacking x11-common (1:7.7+23.1) ... Selecting previously unselected package libxss1:armhf. Preparing to unpack .../035-libxss1_1%3a1.2.3-1+b2_armhf.deb ... Unpacking libxss1:armhf (1:1.2.3-1+b2) ... Selecting previously unselected package libtk8.6:armhf. Preparing to unpack .../036-libtk8.6_8.6.15-1_armhf.deb ... Unpacking libtk8.6:armhf (8.6.15-1) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../037-tk8.6-blt2.5_2.5.3+dfsg-7_armhf.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... Selecting previously unselected package blt. Preparing to unpack .../038-blt_2.5.3+dfsg-7_armhf.deb ... Unpacking blt (2.5.3+dfsg-7) ... Selecting previously unselected package comerr-dev:armhf. Preparing to unpack .../039-comerr-dev_2.1-1.47.1-1+b1_armhf.deb ... Unpacking comerr-dev:armhf (2.1-1.47.1-1+b1) ... Selecting previously unselected package cython3. Preparing to unpack .../040-cython3_3.0.11+dfsg-1+b1_armhf.deb ... Unpacking cython3 (3.0.11+dfsg-1+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../041-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../042-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../043-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../044-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../045-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../046-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../047-libelf1t64_0.192-4_armhf.deb ... Unpacking libelf1t64:armhf (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../048-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../049-libicu72_72.1-5+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-5+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../050-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_armhf.deb ... Unpacking libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../051-gettext_0.22.5-2_armhf.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../052-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../053-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../054-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../055-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../056-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../057-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../058-python3-typeguard_4.4.1-1_all.deb ... Unpacking python3-typeguard (4.4.1-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../059-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../060-python3-jaraco.context_6.0.0-1_all.deb ... Unpacking python3-jaraco.context (6.0.0-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../061-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../062-python3-pkg-resources_74.1.2-2_all.deb ... Unpacking python3-pkg-resources (74.1.2-2) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../063-python3-zipp_3.21.0-1_all.deb ... Unpacking python3-zipp (3.21.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../064-python3-setuptools_74.1.2-2_all.deb ... Unpacking python3-setuptools (74.1.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../065-dh-python_6.20241024_all.deb ... Unpacking dh-python (6.20241024) ... Selecting previously unselected package fonts-lyx. Preparing to unpack .../066-fonts-lyx_2.4.2.1-1_all.deb ... Unpacking fonts-lyx (2.4.2.1-1) ... Selecting previously unselected package libgssrpc4t64:armhf. Preparing to unpack .../067-libgssrpc4t64_1.21.3-3_armhf.deb ... Unpacking libgssrpc4t64:armhf (1.21.3-3) ... Selecting previously unselected package libkadm5clnt-mit12:armhf. Preparing to unpack .../068-libkadm5clnt-mit12_1.21.3-3_armhf.deb ... Unpacking libkadm5clnt-mit12:armhf (1.21.3-3) ... Selecting previously unselected package libkdb5-10t64:armhf. Preparing to unpack .../069-libkdb5-10t64_1.21.3-3_armhf.deb ... Unpacking libkdb5-10t64:armhf (1.21.3-3) ... Selecting previously unselected package libkadm5srv-mit12:armhf. Preparing to unpack .../070-libkadm5srv-mit12_1.21.3-3_armhf.deb ... Unpacking libkadm5srv-mit12:armhf (1.21.3-3) ... Selecting previously unselected package krb5-multidev:armhf. Preparing to unpack .../071-krb5-multidev_1.21.3-3_armhf.deb ... Unpacking krb5-multidev:armhf (1.21.3-3) ... Selecting previously unselected package libblas3:armhf. Preparing to unpack .../072-libblas3_3.12.0-3+b1_armhf.deb ... Unpacking libblas3:armhf (3.12.0-3+b1) ... Selecting previously unselected package libbrotli-dev:armhf. Preparing to unpack .../073-libbrotli-dev_1.1.0-2+b6_armhf.deb ... Unpacking libbrotli-dev:armhf (1.1.0-2+b6) ... Selecting previously unselected package libbz2-dev:armhf. Preparing to unpack .../074-libbz2-dev_1.0.8-6_armhf.deb ... Unpacking libbz2-dev:armhf (1.0.8-6) ... Selecting previously unselected package libsasl2-modules-db:armhf. Preparing to unpack .../075-libsasl2-modules-db_2.1.28+dfsg1-8_armhf.deb ... Unpacking libsasl2-modules-db:armhf (2.1.28+dfsg1-8) ... Selecting previously unselected package libsasl2-2:armhf. Preparing to unpack .../076-libsasl2-2_2.1.28+dfsg1-8_armhf.deb ... Unpacking libsasl2-2:armhf (2.1.28+dfsg1-8) ... Selecting previously unselected package libldap-2.5-0:armhf. Preparing to unpack .../077-libldap-2.5-0_2.5.18+dfsg-3+b1_armhf.deb ... Unpacking libldap-2.5-0:armhf (2.5.18+dfsg-3+b1) ... Selecting previously unselected package libnghttp2-14:armhf. Preparing to unpack .../078-libnghttp2-14_1.64.0-1_armhf.deb ... Unpacking libnghttp2-14:armhf (1.64.0-1) ... Selecting previously unselected package libnghttp3-9:armhf. Preparing to unpack .../079-libnghttp3-9_1.4.0-1+b1_armhf.deb ... Unpacking libnghttp3-9:armhf (1.4.0-1+b1) ... Selecting previously unselected package libngtcp2-16:armhf. Preparing to unpack .../080-libngtcp2-16_1.6.0-1_armhf.deb ... Unpacking libngtcp2-16:armhf (1.6.0-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:armhf. Preparing to unpack .../081-libngtcp2-crypto-gnutls8_1.6.0-1_armhf.deb ... Unpacking libngtcp2-crypto-gnutls8:armhf (1.6.0-1) ... Selecting previously unselected package libpsl5t64:armhf. Preparing to unpack .../082-libpsl5t64_0.21.2-1.1+b1_armhf.deb ... Unpacking libpsl5t64:armhf (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp1:armhf. Preparing to unpack .../083-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_armhf.deb ... Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:armhf. Preparing to unpack .../084-libssh2-1t64_1.11.1-1_armhf.deb ... Unpacking libssh2-1t64:armhf (1.11.1-1) ... Selecting previously unselected package libcurl3t64-gnutls:armhf. Preparing to unpack .../085-libcurl3t64-gnutls_8.11.0-1_armhf.deb ... Unpacking libcurl3t64-gnutls:armhf (8.11.0-1) ... Selecting previously unselected package libevent-2.1-7t64:armhf. Preparing to unpack .../086-libevent-2.1-7t64_2.1.12-stable-10+b1_armhf.deb ... Unpacking libevent-2.1-7t64:armhf (2.1.12-stable-10+b1) ... Selecting previously unselected package libunbound8:armhf. Preparing to unpack .../087-libunbound8_1.22.0-1_armhf.deb ... Unpacking libunbound8:armhf (1.22.0-1) ... Selecting previously unselected package libgnutls-dane0t64:armhf. Preparing to unpack .../088-libgnutls-dane0t64_3.8.8-2_armhf.deb ... Unpacking libgnutls-dane0t64:armhf (3.8.8-2) ... Selecting previously unselected package libgnutls-openssl27t64:armhf. Preparing to unpack .../089-libgnutls-openssl27t64_3.8.8-2_armhf.deb ... Unpacking libgnutls-openssl27t64:armhf (3.8.8-2) ... Selecting previously unselected package libidn2-dev:armhf. Preparing to unpack .../090-libidn2-dev_2.3.7-2+b1_armhf.deb ... Unpacking libidn2-dev:armhf (2.3.7-2+b1) ... Selecting previously unselected package libp11-kit-dev:armhf. Preparing to unpack .../091-libp11-kit-dev_0.25.5-2+b1_armhf.deb ... Unpacking libp11-kit-dev:armhf (0.25.5-2+b1) ... Selecting previously unselected package libtasn1-6-dev:armhf. Preparing to unpack .../092-libtasn1-6-dev_4.19.0-3+b3_armhf.deb ... Unpacking libtasn1-6-dev:armhf (4.19.0-3+b3) ... Selecting previously unselected package libgmpxx4ldbl:armhf. Preparing to unpack .../093-libgmpxx4ldbl_2%3a6.3.0+dfsg-2+b2_armhf.deb ... Unpacking libgmpxx4ldbl:armhf (2:6.3.0+dfsg-2+b2) ... Selecting previously unselected package libgmp-dev:armhf. Preparing to unpack .../094-libgmp-dev_2%3a6.3.0+dfsg-2+b2_armhf.deb ... Unpacking libgmp-dev:armhf (2:6.3.0+dfsg-2+b2) ... Selecting previously unselected package nettle-dev:armhf. Preparing to unpack .../095-nettle-dev_3.10-1+b1_armhf.deb ... Unpacking nettle-dev:armhf (3.10-1+b1) ... Selecting previously unselected package libgnutls28-dev:armhf. Preparing to unpack .../096-libgnutls28-dev_3.8.8-2_armhf.deb ... Unpacking libgnutls28-dev:armhf (3.8.8-2) ... Selecting previously unselected package libkrb5-dev:armhf. Preparing to unpack .../097-libkrb5-dev_1.21.3-3_armhf.deb ... Unpacking libkrb5-dev:armhf (1.21.3-3) ... Selecting previously unselected package libldap-dev:armhf. Preparing to unpack .../098-libldap-dev_2.5.18+dfsg-3+b1_armhf.deb ... Unpacking libldap-dev:armhf (2.5.18+dfsg-3+b1) ... Selecting previously unselected package libpkgconf3:armhf. Preparing to unpack .../099-libpkgconf3_1.8.1-4_armhf.deb ... Unpacking libpkgconf3:armhf (1.8.1-4) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../100-pkgconf-bin_1.8.1-4_armhf.deb ... Unpacking pkgconf-bin (1.8.1-4) ... Selecting previously unselected package pkgconf:armhf. Preparing to unpack .../101-pkgconf_1.8.1-4_armhf.deb ... Unpacking pkgconf:armhf (1.8.1-4) ... Selecting previously unselected package libnghttp2-dev:armhf. Preparing to unpack .../102-libnghttp2-dev_1.64.0-1_armhf.deb ... Unpacking libnghttp2-dev:armhf (1.64.0-1) ... Selecting previously unselected package libnghttp3-dev:armhf. Preparing to unpack .../103-libnghttp3-dev_1.4.0-1+b1_armhf.deb ... Unpacking libnghttp3-dev:armhf (1.4.0-1+b1) ... Selecting previously unselected package libngtcp2-crypto-gnutls-dev:armhf. Preparing to unpack .../104-libngtcp2-crypto-gnutls-dev_1.6.0-1_armhf.deb ... Unpacking libngtcp2-crypto-gnutls-dev:armhf (1.6.0-1) ... Selecting previously unselected package libngtcp2-dev:armhf. Preparing to unpack .../105-libngtcp2-dev_1.6.0-1_armhf.deb ... Unpacking libngtcp2-dev:armhf (1.6.0-1) ... Selecting previously unselected package libpsl-dev:armhf. Preparing to unpack .../106-libpsl-dev_0.21.2-1.1+b1_armhf.deb ... Unpacking libpsl-dev:armhf (0.21.2-1.1+b1) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../107-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package librtmp-dev:armhf. Preparing to unpack .../108-librtmp-dev_2.4+20151223.gitfa8646d.1-2+b5_armhf.deb ... Unpacking librtmp-dev:armhf (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssl-dev:armhf. Preparing to unpack .../109-libssl-dev_3.3.2-2_armhf.deb ... Unpacking libssl-dev:armhf (3.3.2-2) ... Selecting previously unselected package libssh2-1-dev:armhf. Preparing to unpack .../110-libssh2-1-dev_1.11.1-1_armhf.deb ... Unpacking libssh2-1-dev:armhf (1.11.1-1) ... Selecting previously unselected package libzstd-dev:armhf. Preparing to unpack .../111-libzstd-dev_1.5.6+dfsg-1+b1_armhf.deb ... Unpacking libzstd-dev:armhf (1.5.6+dfsg-1+b1) ... Selecting previously unselected package libcurl4-gnutls-dev:armhf. Preparing to unpack .../112-libcurl4-gnutls-dev_8.11.0-1_armhf.deb ... Unpacking libcurl4-gnutls-dev:armhf (8.11.0-1) ... Selecting previously unselected package libdeflate0:armhf. Preparing to unpack .../113-libdeflate0_1.22-1_armhf.deb ... Unpacking libdeflate0:armhf (1.22-1) ... Selecting previously unselected package libdeflate-dev:armhf. Preparing to unpack .../114-libdeflate-dev_1.22-1_armhf.deb ... Unpacking libdeflate-dev:armhf (1.22-1) ... Selecting previously unselected package libexpat1-dev:armhf. Preparing to unpack .../115-libexpat1-dev_2.6.4-1_armhf.deb ... Unpacking libexpat1-dev:armhf (2.6.4-1) ... Selecting previously unselected package libfribidi0:armhf. Preparing to unpack .../116-libfribidi0_1.0.15-1_armhf.deb ... Unpacking libfribidi0:armhf (1.0.15-1) ... Selecting previously unselected package libgfortran5:armhf. Preparing to unpack .../117-libgfortran5_14.2.0-8_armhf.deb ... Unpacking libgfortran5:armhf (14.2.0-8) ... Selecting previously unselected package libglib2.0-0t64:armhf. Preparing to unpack .../118-libglib2.0-0t64_2.82.2-2_armhf.deb ... Unpacking libglib2.0-0t64:armhf (2.82.2-2) ... Selecting previously unselected package libgraphite2-3:armhf. Preparing to unpack .../119-libgraphite2-3_1.3.14-2+b1_armhf.deb ... Unpacking libgraphite2-3:armhf (1.3.14-2+b1) ... Selecting previously unselected package libharfbuzz0b:armhf. Preparing to unpack .../120-libharfbuzz0b_10.0.1-1_armhf.deb ... Unpacking libharfbuzz0b:armhf (10.0.1-1) ... Selecting previously unselected package libhtscodecs2:armhf. Preparing to unpack .../121-libhtscodecs2_1.6.1-1_armhf.deb ... Unpacking libhtscodecs2:armhf (1.6.1-1) ... Selecting previously unselected package libhts3t64:armhf. Preparing to unpack .../122-libhts3t64_1.20+ds-2_armhf.deb ... Unpacking libhts3t64:armhf (1.20+ds-2) ... Selecting previously unselected package liblzma-dev:armhf. Preparing to unpack .../123-liblzma-dev_5.6.3-1+b1_armhf.deb ... Unpacking liblzma-dev:armhf (5.6.3-1+b1) ... Selecting previously unselected package libhts-dev:armhf. Preparing to unpack .../124-libhts-dev_1.20+ds-2_armhf.deb ... Unpacking libhts-dev:armhf (1.20+ds-2) ... Selecting previously unselected package libimagequant0:armhf. Preparing to unpack .../125-libimagequant0_2.18.0-1+b2_armhf.deb ... Unpacking libimagequant0:armhf (2.18.0-1+b2) ... Selecting previously unselected package libjbig0:armhf. Preparing to unpack .../126-libjbig0_2.1-6.1+b2_armhf.deb ... Unpacking libjbig0:armhf (2.1-6.1+b2) ... Selecting previously unselected package libjpeg62-turbo:armhf. Preparing to unpack .../127-libjpeg62-turbo_1%3a2.1.5-3+b1_armhf.deb ... Unpacking libjpeg62-turbo:armhf (1:2.1.5-3+b1) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../128-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../129-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... Selecting previously unselected package libjs-underscore. Preparing to unpack .../130-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../131-libjs-sphinxdoc_7.4.7-4_all.deb ... Unpacking libjs-sphinxdoc (7.4.7-4) ... Selecting previously unselected package liblapack3:armhf. Preparing to unpack .../132-liblapack3_3.12.0-3+b1_armhf.deb ... Unpacking liblapack3:armhf (3.12.0-3+b1) ... Selecting previously unselected package liblbfgsb0:armhf. Preparing to unpack .../133-liblbfgsb0_3.0+dfsg.4-1+b2_armhf.deb ... Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1+b2) ... Selecting previously unselected package liblcms2-2:armhf. Preparing to unpack .../134-liblcms2-2_2.16-2_armhf.deb ... Unpacking liblcms2-2:armhf (2.16-2) ... Selecting previously unselected package liblerc4:armhf. Preparing to unpack .../135-liblerc4_4.0.0+ds-5_armhf.deb ... Unpacking liblerc4:armhf (4.0.0+ds-5) ... Selecting previously unselected package libopenjp2-7:armhf. Preparing to unpack .../136-libopenjp2-7_2.5.0-2+b4_armhf.deb ... Unpacking libopenjp2-7:armhf (2.5.0-2+b4) ... Selecting previously unselected package libpython3.12t64:armhf. Preparing to unpack .../137-libpython3.12t64_3.12.7-3_armhf.deb ... Unpacking libpython3.12t64:armhf (3.12.7-3) ... Selecting previously unselected package libpython3.12-dev:armhf. Preparing to unpack .../138-libpython3.12-dev_3.12.7-3_armhf.deb ... Unpacking libpython3.12-dev:armhf (3.12.7-3) ... Selecting previously unselected package libpython3-dev:armhf. Preparing to unpack .../139-libpython3-dev_3.12.6-1_armhf.deb ... Unpacking libpython3-dev:armhf (3.12.6-1) ... Selecting previously unselected package libpython3-all-dev:armhf. Preparing to unpack .../140-libpython3-all-dev_3.12.6-1_armhf.deb ... Unpacking libpython3-all-dev:armhf (3.12.6-1) ... Selecting previously unselected package libqhull-r8.0:armhf. Preparing to unpack .../141-libqhull-r8.0_2020.2-6+b2_armhf.deb ... Unpacking libqhull-r8.0:armhf (2020.2-6+b2) ... Selecting previously unselected package libraqm0:armhf. Preparing to unpack .../142-libraqm0_0.10.1-1+b2_armhf.deb ... Unpacking libraqm0:armhf (0.10.1-1+b2) ... Selecting previously unselected package libsharpyuv0:armhf. Preparing to unpack .../143-libsharpyuv0_1.4.0-0.1+b1_armhf.deb ... Unpacking libsharpyuv0:armhf (1.4.0-0.1+b1) ... Selecting previously unselected package libwebp7:armhf. Preparing to unpack .../144-libwebp7_1.4.0-0.1+b1_armhf.deb ... Unpacking libwebp7:armhf (1.4.0-0.1+b1) ... Selecting previously unselected package libtiff6:armhf. Preparing to unpack .../145-libtiff6_4.5.1+git230720-5_armhf.deb ... Unpacking libtiff6:armhf (4.5.1+git230720-5) ... Selecting previously unselected package libwebpdemux2:armhf. Preparing to unpack .../146-libwebpdemux2_1.4.0-0.1+b1_armhf.deb ... Unpacking libwebpdemux2:armhf (1.4.0-0.1+b1) ... Selecting previously unselected package libwebpmux3:armhf. Preparing to unpack .../147-libwebpmux3_1.4.0-0.1+b1_armhf.deb ... Unpacking libwebpmux3:armhf (1.4.0-0.1+b1) ... Selecting previously unselected package libxslt1.1:armhf. Preparing to unpack .../148-libxslt1.1_1.1.35-1.1+b1_armhf.deb ... Unpacking libxslt1.1:armhf (1.1.35-1.1+b1) ... Selecting previously unselected package libyaml-0-2:armhf. Preparing to unpack .../149-libyaml-0-2_0.2.5-1+b2_armhf.deb ... Unpacking libyaml-0-2:armhf (0.2.5-1+b2) ... Selecting previously unselected package python-is-python3. Preparing to unpack .../150-python-is-python3_3.11.4-1_all.deb ... Unpacking python-is-python3 (3.11.4-1) ... Selecting previously unselected package python-matplotlib-data. Preparing to unpack .../151-python-matplotlib-data_3.8.3-3_all.deb ... Unpacking python-matplotlib-data (3.8.3-3) ... Selecting previously unselected package python3-all. Preparing to unpack .../152-python3-all_3.12.6-1_armhf.deb ... Unpacking python3-all (3.12.6-1) ... Selecting previously unselected package python3.12-dev. Preparing to unpack .../153-python3.12-dev_3.12.7-3_armhf.deb ... Unpacking python3.12-dev (3.12.7-3) ... Selecting previously unselected package python3-dev. Preparing to unpack .../154-python3-dev_3.12.6-1_armhf.deb ... Unpacking python3-dev (3.12.6-1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../155-python3-all-dev_3.12.6-1_armhf.deb ... Unpacking python3-all-dev (3.12.6-1) ... Selecting previously unselected package python3-appdirs. Preparing to unpack .../156-python3-appdirs_1.4.4-4_all.deb ... Unpacking python3-appdirs (1.4.4-4) ... Selecting previously unselected package python3-attr. Preparing to unpack .../157-python3-attr_23.2.0-2_all.deb ... Unpacking python3-attr (23.2.0-2) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../158-python3-dateutil_2.9.0-3_all.deb ... Unpacking python3-dateutil (2.9.0-3) ... Selecting previously unselected package python3-pil:armhf. Preparing to unpack .../159-python3-pil_10.4.0-1+b1_armhf.deb ... Unpacking python3-pil:armhf (10.4.0-1+b1) ... Selecting previously unselected package python3.12-tk. Preparing to unpack .../160-python3.12-tk_3.12.7-3_armhf.deb ... Unpacking python3.12-tk (3.12.7-3) ... Selecting previously unselected package python3.13-tk. Preparing to unpack .../161-python3.13-tk_3.13.0-2_armhf.deb ... Unpacking python3.13-tk (3.13.0-2) ... Selecting previously unselected package python3-tk:armhf. Preparing to unpack .../162-python3-tk_3.12.7-1_armhf.deb ... Unpacking python3-tk:armhf (3.12.7-1) ... Selecting previously unselected package python3-pil.imagetk:armhf. Preparing to unpack .../163-python3-pil.imagetk_10.4.0-1+b1_armhf.deb ... Unpacking python3-pil.imagetk:armhf (10.4.0-1+b1) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../164-python3-pyparsing_3.1.2-1_all.deb ... Unpacking python3-pyparsing (3.1.2-1) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../165-python3-numpy_1%3a1.26.4+ds-12_armhf.deb ... Unpacking python3-numpy (1:1.26.4+ds-12) ... Selecting previously unselected package python3-contourpy. Preparing to unpack .../166-python3-contourpy_1.3.0-2+b1_armhf.deb ... Unpacking python3-contourpy (1.3.0-2+b1) ... Selecting previously unselected package python3-cycler. Preparing to unpack .../167-python3-cycler_0.12.1-1_all.deb ... Unpacking python3-cycler (0.12.1-1) ... Selecting previously unselected package python3-brotli. Preparing to unpack .../168-python3-brotli_1.1.0-2+b6_armhf.deb ... Unpacking python3-brotli (1.1.0-2+b6) ... Selecting previously unselected package python3-tz. Preparing to unpack .../169-python3-tz_2024.1-2_all.deb ... Unpacking python3-tz (2024.1-2) ... Selecting previously unselected package python3-six. Preparing to unpack .../170-python3-six_1.16.0-7_all.deb ... Unpacking python3-six (1.16.0-7) ... Selecting previously unselected package python3-fs. Preparing to unpack .../171-python3-fs_2.4.16-4_all.deb ... Unpacking python3-fs (2.4.16-4) ... Selecting previously unselected package python3-lxml:armhf. Preparing to unpack .../172-python3-lxml_5.3.0-1+b1_armhf.deb ... Unpacking python3-lxml:armhf (5.3.0-1+b1) ... Selecting previously unselected package python3-lz4. Preparing to unpack .../173-python3-lz4_4.0.2+dfsg-1+b5_armhf.deb ... Unpacking python3-lz4 (4.0.2+dfsg-1+b5) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../174-python3-decorator_5.1.1-5_all.deb ... Unpacking python3-decorator (5.1.1-5) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../175-python3-scipy_1.13.1-6_armhf.deb ... Unpacking python3-scipy (1.13.1-6) ... Selecting previously unselected package python3-mpmath. Preparing to unpack .../176-python3-mpmath_1.3.0-1_all.deb ... Unpacking python3-mpmath (1.3.0-1) ... Selecting previously unselected package python3-sympy. Preparing to unpack .../177-python3-sympy_1.13.3-1_all.deb ... Unpacking python3-sympy (1.13.3-1) ... Selecting previously unselected package python3-ufolib2. Preparing to unpack .../178-python3-ufolib2_0.16.1+dfsg1-1_all.deb ... Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ... Selecting previously unselected package unicode-data. Preparing to unpack .../179-unicode-data_15.1.0-1_all.deb ... Unpacking unicode-data (15.1.0-1) ... Selecting previously unselected package python3-fonttools. Preparing to unpack .../180-python3-fonttools_4.55.0-3_armhf.deb ... Unpacking python3-fonttools (4.55.0-3) ... Selecting previously unselected package python3-kiwisolver. Preparing to unpack .../181-python3-kiwisolver_1.4.7-2+b1_armhf.deb ... Unpacking python3-kiwisolver (1.4.7-2+b1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../182-python3-packaging_24.2-1_all.deb ... Unpacking python3-packaging (24.2-1) ... Selecting previously unselected package python3-matplotlib. Preparing to unpack .../183-python3-matplotlib_3.8.3-3+b1_armhf.deb ... Unpacking python3-matplotlib (3.8.3-3+b1) ... Selecting previously unselected package python3-pandas-lib:armhf. Preparing to unpack .../184-python3-pandas-lib_2.2.3+dfsg-5+b1_armhf.deb ... Unpacking python3-pandas-lib:armhf (2.2.3+dfsg-5+b1) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../185-python3-pandas_2.2.3+dfsg-5_all.deb ... Unpacking python3-pandas (2.2.3+dfsg-5) ... Selecting previously unselected package python3-certifi. Preparing to unpack .../186-python3-certifi_2024.8.30+dfsg-1_all.deb ... Unpacking python3-certifi (2024.8.30+dfsg-1) ... Selecting previously unselected package python3-charset-normalizer. Preparing to unpack .../187-python3-charset-normalizer_3.4.0-1+b1_armhf.deb ... Unpacking python3-charset-normalizer (3.4.0-1+b1) ... Selecting previously unselected package python3-idna. Preparing to unpack .../188-python3-idna_3.8-2_all.deb ... Unpacking python3-idna (3.8-2) ... Selecting previously unselected package python3-urllib3. Preparing to unpack .../189-python3-urllib3_2.0.7-2_all.deb ... Unpacking python3-urllib3 (2.0.7-2) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../190-python3-chardet_5.2.0+dfsg-1_all.deb ... Unpacking python3-chardet (5.2.0+dfsg-1) ... Selecting previously unselected package python3-requests. Preparing to unpack .../191-python3-requests_2.32.3+dfsg-1_all.deb ... Unpacking python3-requests (2.32.3+dfsg-1) ... Selecting previously unselected package python3-bioframe. Preparing to unpack .../192-python3-bioframe_0.4.1-1_all.deb ... Unpacking python3-bioframe (0.4.1-1) ... Selecting previously unselected package python3-colorama. Preparing to unpack .../193-python3-colorama_0.4.6-4_all.deb ... Unpacking python3-colorama (0.4.6-4) ... Selecting previously unselected package python3-click. Preparing to unpack .../194-python3-click_8.1.7-2_all.deb ... Unpacking python3-click (8.1.7-2) ... Selecting previously unselected package python3-exceptiongroup. Preparing to unpack .../195-python3-exceptiongroup_1.2.2-1_all.deb ... Unpacking python3-exceptiongroup (1.2.2-1) ... Selecting previously unselected package python3-iniconfig. Preparing to unpack .../196-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../197-python3-pluggy_1.5.0-1_all.deb ... Unpacking python3-pluggy (1.5.0-1) ... Selecting previously unselected package python3-pysam. Preparing to unpack .../198-python3-pysam_0.22.1+ds-2+b2_armhf.deb ... Unpacking python3-pysam (0.22.1+ds-2+b2) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../199-python3-pytest_8.3.3-1_all.deb ... Unpacking python3-pytest (8.3.3-1) ... Selecting previously unselected package python3-yaml. Preparing to unpack .../200-python3-yaml_6.0.2-1+b1_armhf.deb ... Unpacking python3-yaml (6.0.2-1+b1) ... Setting up libhtscodecs2:armhf (1.6.1-1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:armhf (1.5.8-1) ... Setting up libgraphite2-3:armhf (1.3.14-2+b1) ... Setting up libgnutls-openssl27t64:armhf (3.8.8-2) ... Setting up liblcms2-2:armhf (2.16-2) ... Setting up libsharpyuv0:armhf (1.4.0-0.1+b1) ... Setting up libxau6:armhf (1:1.0.11-1) ... Setting up libxdmcp6:armhf (1:1.1.5-1) ... Setting up libkeyutils1:armhf (1.6.3-4) ... Setting up libxcb1:armhf (1.17.0-2+b1) ... Setting up libicu72:armhf (72.1-5+b1) ... Setting up libzstd-dev:armhf (1.5.6+dfsg-1+b1) ... Setting up liblerc4:armhf (4.0.0+ds-5) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:armhf (0.2.5-1+b2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up fonts-lyx (2.4.2.1-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:armhf (1.1.0-2+b6) ... Setting up libmagic1t64:armhf (1:5.45-3+b1) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libpsl5t64:armhf (0.21.2-1.1+b1) ... Setting up libnghttp2-14:armhf (1.64.0-1) ... Setting up libdeflate0:armhf (1.22-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libevent-2.1-7t64:armhf (2.1.12-stable-10+b1) ... Setting up libqhull-r8.0:armhf (2020.2-6+b2) ... Setting up libcom-err2:armhf (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libjbig0:armhf (2.1-6.1+b2) ... Setting up libelf1t64:armhf (0.192-4) ... Setting up libpsl-dev:armhf (0.21.2-1.1+b1) ... Setting up libkrb5support0:armhf (1.21.3-3) ... Setting up libsasl2-modules-db:armhf (2.1.28+dfsg1-8) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Nov 27 02:52:22 UTC 2024. Universal Time is now: Wed Nov 27 02:52:22 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libglib2.0-0t64:armhf (2.82.2-2) ... No schema files found: doing nothing. Setting up libblas3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libunbound8:armhf (1.22.0-1) ... Setting up libpkgconf3:armhf (1.8.1-4) ... Setting up libgmpxx4ldbl:armhf (2:6.3.0+dfsg-2+b2) ... Setting up libexpat1-dev:armhf (2.6.4-1) ... Setting up libjpeg62-turbo:armhf (1:2.1.5-3+b1) ... Setting up libgnutls-dane0t64:armhf (3.8.8-2) ... Setting up libx11-data (2:1.8.10-2) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libfribidi0:armhf (1.0.15-1) ... Setting up libimagequant0:armhf (2.18.0-1+b2) ... Setting up comerr-dev:armhf (2.1-1.47.1-1+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libssl-dev:armhf (3.3.2-2) ... Setting up libpng16-16t64:armhf (1.6.44-2) ... Setting up libtcl8.6:armhf (8.6.15+dfsg-2) ... Setting up autopoint (0.22.5-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libk5crypto3:armhf (1.21.3-3) ... Setting up libidn2-dev:armhf (2.3.7-2+b1) ... Setting up libsasl2-2:armhf (2.1.28+dfsg1-8) ... Setting up libgfortran5:armhf (14.2.0-8) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:armhf (1.4.0-1+b1) ... Setting up libwebp7:armhf (1.4.0-0.1+b1) ... Setting up libnghttp3-dev:armhf (1.4.0-1+b1) ... Setting up liblzma-dev:armhf (5.6.3-1+b1) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:armhf (4.5.1+git230720-5) ... Setting up libuchardet0:armhf (0.0.8-1+b2) ... Setting up libopenjp2-7:armhf (2.5.0-2+b4) ... Setting up libx11-6:armhf (2:1.8.10-2) ... Setting up netbase (6.4) ... Setting up libngtcp2-16:armhf (1.6.0-1) ... Setting up libkrb5-3:armhf (1.21.3-3) ... Setting up libssh2-1t64:armhf (1.11.1-1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up python-matplotlib-data (3.8.3-3) ... Setting up libtasn1-6-dev:armhf (4.19.0-3+b3) ... Setting up openssl (3.3.2-2) ... Setting up libwebpmux3:armhf (1.4.0-0.1+b1) ... Setting up libdeflate-dev:armhf (1.22-1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libbrotli-dev:armhf (1.1.0-2+b6) ... Setting up libngtcp2-crypto-gnutls8:armhf (1.6.0-1) ... Setting up libp11-kit-dev:armhf (0.25.5-2+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libbz2-dev:armhf (1.0.8-6) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up gettext (0.22.5-2) ... Setting up libgmp-dev:armhf (2:6.3.0+dfsg-2+b2) ... Setting up nettle-dev:armhf (3.10-1+b1) ... Setting up libxrender1:armhf (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libwebpdemux2:armhf (1.4.0-0.1+b1) ... Setting up libxext6:armhf (2:1.3.4-1+b2) ... Setting up libngtcp2-crypto-gnutls-dev:armhf (1.6.0-1) ... Setting up libngtcp2-dev:armhf (1.6.0-1) ... Setting up libldap-2.5-0:armhf (2.5.18+dfsg-3+b1) ... Setting up pkgconf:armhf (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... Setting up libldap-dev:armhf (2.5.18+dfsg-3+b1) ... Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... Setting up libssh2-1-dev:armhf (1.11.1-1) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up libreadline8t64:armhf (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libxslt1.1:armhf (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:armhf (10.0.1-1) ... Setting up libxss1:armhf (1:1.2.3-1+b2) ... Setting up libfontconfig1:armhf (2.15.0-1.1+b1) ... Setting up liblbfgsb0:armhf (3.0+dfsg.4-1+b2) ... Setting up libgnutls28-dev:armhf (3.8.8-2) ... Setting up libnghttp2-dev:armhf (1.64.0-1) ... Setting up libxft2:armhf (2.3.6-1+b2) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:armhf (8.6.15-1) ... Setting up python3.12-tk (3.12.7-3) ... Setting up libcurl3t64-gnutls:armhf (8.11.0-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3.13-tk (3.13.0-2) ... Setting up libgssrpc4t64:armhf (1.21.3-3) ... Setting up libraqm0:armhf (0.10.1-1+b2) ... Setting up librtmp-dev:armhf (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libnsl2:armhf (1.3.0-3+b3) ... Setting up libhts3t64:armhf (1.20+ds-2) ... Setting up libkadm5clnt-mit12:armhf (1.21.3-3) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libpython3.12-stdlib:armhf (3.12.7-3) ... Setting up libkdb5-10t64:armhf (1.21.3-3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3.12t64:armhf (3.12.7-3) ... Setting up libkadm5srv-mit12:armhf (1.21.3-3) ... Setting up libpython3-stdlib:armhf (3.12.6-1) ... Setting up krb5-multidev:armhf (1.21.3-3) ... Setting up python3 (3.12.6-1) ... Setting up libpython3.12-dev:armhf (3.12.7-3) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-7) ... Setting up libkrb5-dev:armhf (1.21.3-3) ... Setting up python3-pil:armhf (10.4.0-1+b1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.2-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-brotli (1.1.0-2+b6) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2+b1) ... Setting up python3-idna (3.8-2) ... Setting up python3.12-dev (3.12.7-3) ... Setting up cython3 (3.0.11+dfsg-1+b1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-lxml:armhf (5.3.0-1+b1) ... Setting up python3-exceptiongroup (1.2.2-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python-is-python3 (3.11.4-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (23.2.0-2) ... Setting up python3-pysam (0.22.1+ds-2+b2) ... Setting up libpython3-dev:armhf (3.12.6-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-colorama (0.4.6-4) ... Setting up python3-lz4 (4.0.2+dfsg-1+b5) ... Setting up python3-charset-normalizer (3.4.0-1+b1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-yaml (6.0.2-1+b1) ... Setting up python3-tk:armhf (3.12.7-1) ... Setting up python3-click (8.1.7-2) ... Setting up libcurl4-gnutls-dev:armhf (8.11.0-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:armhf (10.4.0-1+b1) ... Setting up libpython3-all-dev:armhf (3.12.6-1) ... Setting up python3-dev (3.12.6-1) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-all-dev (3.12.6-1) ... Setting up python3-setuptools (74.1.2-2) ... Setting up libhts-dev:armhf (1.20+ds-2) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up python3-contourpy (1.3.0-2+b1) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-6) ... Setting up python3-pandas-lib:armhf (2.2.3+dfsg-5+b1) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up python3-fonttools (4.55.0-3) ... Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-3+b1) ... Setting up python3-bioframe (0.4.1-1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pairtools-1.1.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pairtools_1.1.0-1_source.changes dpkg-buildpackage: info: source package pairtools dpkg-buildpackage: info: source version 1.1.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alexandre Detiste dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --with numpy3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/pairtools-1.1.0' dh_auto_clean I: pybuild base:311: python3.12 setup.py clean /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/pairtools-1.1.0/pairtools/lib/parse_pysam.pxd tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling /build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.pyx because it changed. Compiling /build/reproducible-path/pairtools-1.1.0/pairtools/lib/parse_pysam.pyx because it changed. Compiling /build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.pyx because it changed. [1/3] Cythonizing /build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.pyx [2/3] Cythonizing /build/reproducible-path/pairtools-1.1.0/pairtools/lib/parse_pysam.pyx [3/3] Cythonizing /build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.pyx running clean removing '/build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build' (and everything under it) 'build/bdist.linux-armv7l' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -f pairtools/lib/*.c pairtools/lib/regions.cpp make[1]: Leaving directory '/build/reproducible-path/pairtools-1.1.0' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with numpy3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py config /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/pairtools-1.1.0/pairtools/lib/parse_pysam.pxd tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling /build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.pyx because it changed. Compiling /build/reproducible-path/pairtools-1.1.0/pairtools/lib/parse_pysam.pyx because it changed. Compiling /build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.pyx because it changed. [1/3] Cythonizing /build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.pyx [2/3] Cythonizing /build/reproducible-path/pairtools-1.1.0/pairtools/lib/parse_pysam.pyx [3/3] Cythonizing /build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.pyx running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools copying pairtools/_logging.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools copying pairtools/__main__.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools copying pairtools/__init__.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools creating /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/header.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/scaling.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/restrict.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/phase.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/dedup.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/parse.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/sort.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/stats.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/filterbycov.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/markasdup.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/flip.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/merge.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/sample.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/__init__.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/parse2.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/select.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli copying pairtools/cli/split.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli creating /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/pairsio.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/pipes.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/scaling.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/restrict.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/headerops.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/phase.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/dedup.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/pairsam_format.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/fileio.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/parse.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/stats.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/filterbycov.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/__init__.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib copying pairtools/lib/select.py -> /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib running build_ext building 'pairtools.lib.dedup_cython' extension creating build creating build/temp.linux-armv7l-cpython-312 creating build/temp.linux-armv7l-cpython-312/build creating build/temp.linux-armv7l-cpython-312/build/reproducible-path creating build/temp.linux-armv7l-cpython-312/build/reproducible-path/pairtools-1.1.0 creating build/temp.linux-armv7l-cpython-312/build/reproducible-path/pairtools-1.1.0/pairtools creating build/temp.linux-armv7l-cpython-312/build/reproducible-path/pairtools-1.1.0/pairtools/lib arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pairtools-1.1.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -c /build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.c -o build/temp.linux-armv7l-cpython-312/build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from /build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.c:1240: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pairtools-1.1.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-312/build/reproducible-path/pairtools-1.1.0/pairtools/lib/dedup_cython.o -L/usr/lib/arm-linux-gnueabihf -o /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/dedup_cython.cpython-312-arm-linux-gnueabihf.so building 'pairtools.lib.parse_pysam' extension arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pairtools-1.1.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ipairtools/lib -I/usr/lib/python3/dist-packages/pysam -I/usr/lib/python3/dist-packages/pysam/include/samtools -I/usr/include/python3.12 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -c /build/reproducible-path/pairtools-1.1.0/pairtools/lib/parse_pysam.c -o build/temp.linux-armv7l-cpython-312/build/reproducible-path/pairtools-1.1.0/pairtools/lib/parse_pysam.o arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pairtools-1.1.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-312/build/reproducible-path/pairtools-1.1.0/pairtools/lib/parse_pysam.o -L/usr/lib/arm-linux-gnueabihf -o /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/parse_pysam.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/pysam/libctabixproxies.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/pysam/libcfaidx.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/pysam/libcsamfile.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/pysam/libcvcf.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/pysam/libcbcf.cpython-312-arm-linux-gnueabihf.so /usr/lib/python3/dist-packages/pysam/libctabix.cpython-312-arm-linux-gnueabihf.so building 'pairtools.lib.regions' extension arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pairtools-1.1.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -c /build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.cpp -o build/temp.linux-armv7l-cpython-312/build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from /build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.cpp:1302: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pairtools-1.1.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/reproducible-path/pairtools-1.1.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-312/build/reproducible-path/pairtools-1.1.0/pairtools/lib/regions.o -L/usr/lib/arm-linux-gnueabihf -o /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/regions.cpython-312-arm-linux-gnueabihf.so debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/pairtools-1.1.0' dh_auto_test -- --system=custom --test-args="export CURPY={interpreter}; \ cd {build_dir} && {interpreter} -m pytest -v -k 'not test_dedup'" I: pybuild base:311: export CURPY=python3.12; cd /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build && python3.12 -m pytest -v -k 'not test_dedup' ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.12 cachedir: .pytest_cache rootdir: /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build configfile: pytest.ini testpaths: tests plugins: typeguard-4.4.1 collecting ... collected 32 items / 1 deselected / 31 selected tests/test_filterbycov.py::test_mock_pairs PASSED [ 3%] tests/test_flip.py::test_flip PASSED [ 6%] tests/test_header.py::test_generate PASSED [ 9%] tests/test_headerops.py::test_make_standard_header PASSED [ 12%] tests/test_headerops.py::test_samheaderops PASSED [ 16%] tests/test_headerops.py::test_merge_pairheaders PASSED [ 19%] tests/test_headerops.py::test_merge_different_pairheaders PASSED [ 22%] tests/test_headerops.py::test_force_merge_pairheaders PASSED [ 25%] tests/test_headerops.py::test_merge_samheaders PASSED [ 29%] tests/test_headerops.py::test_merge_headers PASSED [ 32%] tests/test_markasdup.py::test_mock_pairsam PASSED [ 35%] tests/test_merge.py::test_mock_pairsam PASSED [ 38%] tests/test_parse.py::test_python_version PASSED [ 41%] tests/test_parse.py::test_mock_pysam PASSED [ 45%] tests/test_parse.py::test_mock_pysam_parse_all PASSED [ 48%] tests/test_parse2.py::test_mock_pysam_parse2_read PASSED [ 51%] tests/test_parse2.py::test_mock_pysam_parse2_pair PASSED [ 54%] tests/test_restrict.py::test_restrict PASSED [ 58%] tests/test_scaling.py::test_scaling PASSED [ 61%] tests/test_select.py::test_preserve PASSED [ 64%] tests/test_select.py::test_equal PASSED [ 67%] tests/test_select.py::test_csv PASSED [ 70%] tests/test_select.py::test_wildcard PASSED [ 74%] tests/test_select.py::test_regex PASSED [ 77%] tests/test_select.py::test_chrom_subset PASSED [ 80%] tests/test_select.py::test_remove_columns PASSED [ 83%] tests/test_sort.py::test_mock_pairsam PASSED [ 87%] tests/test_split.py::test_split PASSED [ 90%] tests/test_stats.py::test_mock_pairsam PASSED [ 93%] tests/test_stats.py::test_merge_stats PASSED [ 96%] tests/test_stats.py::test_find_dist_freq_convergence_distance PASSED [100%] =============================== warnings summary =============================== tests/test_stats.py::test_find_dist_freq_convergence_distance /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/stats.py:466: RuntimeWarning: divide by zero encountered in scalar divide strands: n_cis_pairs / norm_factor tests/test_stats.py::test_find_dist_freq_convergence_distance /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/stats.py:474: RuntimeWarning: divide by zero encountered in scalar divide sum(list(n_cis_pairs_above_convergence_dist.values())) / norm_factor ) tests/test_stats.py::test_find_dist_freq_convergence_distance /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/stats.py:410: RuntimeWarning: invalid value encountered in divide np.abs(dist_freqs_by_strands[strands] - avg_freq_all_strands) tests/test_stats.py::test_find_dist_freq_convergence_distance /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/stats.py:466: RuntimeWarning: invalid value encountered in scalar divide strands: n_cis_pairs / norm_factor tests/test_stats.py::test_find_dist_freq_convergence_distance /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/stats.py:474: RuntimeWarning: invalid value encountered in scalar divide sum(list(n_cis_pairs_above_convergence_dist.values())) / norm_factor ) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========== 31 passed, 1 deselected, 5 warnings in 132.67s (0:02:12) =========== make[1]: Leaving directory '/build/reproducible-path/pairtools-1.1.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_ext running install_lib creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12 creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/mock.merged_chromsizes.stats -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/mock.merged_mixed.stats -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/mock.stats -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/.pytest_cache copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/.pytest_cache/.gitignore -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/.pytest_cache copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/.pytest_cache/CACHEDIR.TAG -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/.pytest_cache copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/.pytest_cache/README.md -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/.pytest_cache creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/.pytest_cache/v creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/.pytest_cache/v/cache/stepwise -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/.pytest_cache/v/cache/nodeids -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/__pycache__/__main__.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/__pycache__/_logging.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/__pycache__ creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/parse2.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/header.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/dedup.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/select.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/stats.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/split.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/markasdup.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/flip.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/restrict.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/parse.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/sample.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/scaling.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/filterbycov.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/sort.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/merge.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__pycache__/phase.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/header.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/scaling.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/restrict.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/phase.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/dedup.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/parse.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/sort.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/stats.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/filterbycov.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/markasdup.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/flip.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/merge.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/sample.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/__init__.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/parse2.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/select.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/cli/split.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/_logging.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/__main__.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib creating /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/dedup.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/select.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/stats.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/pairsam_format.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/pipes.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/restrict.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/parse.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/pairsio.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/scaling.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/filterbycov.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/fileio.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/phase.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__pycache__/headerops.cpython-312.pyc -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__pycache__ copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/parse_pysam.cpython-312-arm-linux-gnueabihf.so -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/pairsio.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/pipes.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/scaling.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/regions.cpython-312-arm-linux-gnueabihf.so -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/restrict.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/headerops.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/phase.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/dedup.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/pairsam_format.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/fileio.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/parse.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/stats.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/filterbycov.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/dedup_cython.cpython-312-arm-linux-gnueabihf.so -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/__init__.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/lib/select.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/pairtools/__init__.py -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/mock.merged_no_chromsizes.stats -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages copying /build/reproducible-path/pairtools-1.1.0/.pybuild/cpython3_3.12/build/mock.no_chromsizes.stats -> /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/header.py to header.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/scaling.py to scaling.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/restrict.py to restrict.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/phase.py to phase.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/dedup.py to dedup.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/parse.py to parse.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/sort.py to sort.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/stats.py to stats.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/filterbycov.py to filterbycov.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/markasdup.py to markasdup.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/flip.py to flip.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/merge.py to merge.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/sample.py to sample.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/parse2.py to parse2.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/select.py to select.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/cli/split.py to split.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/_logging.py to _logging.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/__main__.py to __main__.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/pairsio.py to pairsio.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/pipes.py to pipes.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/scaling.py to scaling.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/restrict.py to restrict.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/headerops.py to headerops.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/phase.py to phase.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/dedup.py to dedup.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/pairsam_format.py to pairsam_format.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/fileio.py to fileio.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/parse.py to parse.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/stats.py to stats.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/filterbycov.py to filterbycov.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/lib/select.py to select.cpython-312.pyc byte-compiling /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools/__init__.py to __init__.cpython-312.pyc running install_egg_info running egg_info creating pairtools.egg-info writing pairtools.egg-info/PKG-INFO writing dependency_links to pairtools.egg-info/dependency_links.txt writing entry points to pairtools.egg-info/entry_points.txt writing requirements to pairtools.egg-info/requires.txt writing top-level names to pairtools.egg-info/top_level.txt writing manifest file 'pairtools.egg-info/SOURCES.txt' reading manifest file 'pairtools.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'doc/_build' no previously-included directories found matching 'doc/_templates' warning: no previously-included files matching '__pycache__/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'pairtools.egg-info/SOURCES.txt' Copying pairtools.egg-info to /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/lib/python3.12/dist-packages/pairtools-1.1.0.egg-info Skipping SOURCES.txt running install_scripts Installing pairtools script to /build/reproducible-path/pairtools-1.1.0/debian/python3-pairtools/usr/bin debian/rules execute_after_dh_auto_install make[1]: Entering directory '/build/reproducible-path/pairtools-1.1.0' find debian/ -name '*.stats' -delete make[1]: Leaving directory '/build/reproducible-path/pairtools-1.1.0' dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb -O--buildsystem=pybuild dh_numpy3 -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package python3-pairtools-examples: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package python3-pairtools-examples: substitution variable ${python3:Depends} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-pairtools' in '../python3-pairtools_1.1.0-1_armhf.deb'. dpkg-deb: building package 'python3-pairtools-dbgsym' in '../python3-pairtools-dbgsym_1.1.0-1_armhf.deb'. dpkg-deb: building package 'python3-pairtools-examples' in '../python3-pairtools-examples_1.1.0-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../pairtools_1.1.0-1_armhf.buildinfo dpkg-genchanges --build=binary -O../pairtools_1.1.0-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/21022 and its subdirectories I: Current time: Tue Nov 26 14:58:47 -12 2024 I: pbuilder-time-stamp: 1732676327 Wed Nov 27 02:59:08 UTC 2024 I: 1st build successful. Starting 2nd build on remote node cbxi4a-armhf-rb.debian.net. Wed Nov 27 02:59:08 UTC 2024 I: Preparing to do remote build '2' on cbxi4a-armhf-rb.debian.net. Wed Nov 27 03:28:58 UTC 2024 I: Deleting $TMPDIR on cbxi4a-armhf-rb.debian.net. Wed Nov 27 03:29:00 UTC 2024 I: pairtools_1.1.0-1_armhf.changes: Format: 1.8 Date: Mon, 18 Nov 2024 22:23:36 +0100 Source: pairtools Binary: python3-pairtools python3-pairtools-dbgsym python3-pairtools-examples Architecture: armhf Version: 1.1.0-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Alexandre Detiste Description: python3-pairtools - Framework to process sequencing data from a Hi-C experiment python3-pairtools-examples - Process sequencing data from a Hi-C experiment (examples) Closes: 1081672 1085765 Changes: pairtools (1.1.0-1) unstable; urgency=medium . * Team upload. * New upstream version 1.1.0 * Vendor "the" pipes module that was removed from Python3.13 (Closes: #1081672) * Patch-out SyntaxWarnings (Closes: #1085765 ) Checksums-Sha1: ec4c9b000a048466ac3de901bc30de82f511f7e6 11571 pairtools_1.1.0-1_armhf.buildinfo c41f6afa89d6a8c449db9944d73f778db639a089 815736 python3-pairtools-dbgsym_1.1.0-1_armhf.deb 73c1ae90ca57cdea3d26696ea7190cc587f81a89 964604 python3-pairtools-examples_1.1.0-1_armhf.deb 424a7852fa9a02f7dafac521e0c7ce5e3c3fec46 186140 python3-pairtools_1.1.0-1_armhf.deb Checksums-Sha256: e751923e269cb3bd8506cd9a44244540505b9590876bf6745a880b978c948226 11571 pairtools_1.1.0-1_armhf.buildinfo 3a3f7820f9cbe9c452c257082e970c126123a4d175bead23e5305171a3ff7834 815736 python3-pairtools-dbgsym_1.1.0-1_armhf.deb bb23b92640eed6446e685cad993229710fb343ed40c5a430f645655b9399f009 964604 python3-pairtools-examples_1.1.0-1_armhf.deb 4c58616a5189fefa1acc3c69879e7690371b26d3d68d25e4ed3849c187d97560 186140 python3-pairtools_1.1.0-1_armhf.deb Files: 43742a7d0d409115228be5038b049fb1 11571 python optional pairtools_1.1.0-1_armhf.buildinfo 8d89294084cb3bfe74a3de1f85aac570 815736 debug optional python3-pairtools-dbgsym_1.1.0-1_armhf.deb 22fd4f5fb54291bc63c165f391407780 964604 python optional python3-pairtools-examples_1.1.0-1_armhf.deb b2de7581300180e4900b3045dc71b831 186140 python optional python3-pairtools_1.1.0-1_armhf.deb Wed Nov 27 03:29:01 UTC 2024 I: diffoscope 283 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_19-4360.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.cSP4Cyxu/pairtools_1.1.0-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.cSP4Cyxu/pairtools_1.1.0-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.cSP4Cyxu/pairtools_1.1.0-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.cSP4Cyxu/b1/pairtools_1.1.0-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.cSP4Cyxu/b2/pairtools_1.1.0-1_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.356s) 0.356s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.033s) 0.033s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 674ms CPU time consumed: 673ms Wed Nov 27 03:29:02 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Wed Nov 27 03:29:02 UTC 2024 I: pairtools from trixie built successfully and reproducibly on armhf. Wed Nov 27 03:29:03 UTC 2024 I: Submitting .buildinfo files to external archives: Wed Nov 27 03:29:03 UTC 2024 I: Submitting 16K b1/pairtools_1.1.0-1_armhf.buildinfo.asc Wed Nov 27 03:29:04 UTC 2024 I: Submitting 16K b2/pairtools_1.1.0-1_armhf.buildinfo.asc Wed Nov 27 03:29:05 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Nov 27 03:29:05 UTC 2024 I: Done submitting .buildinfo files. Wed Nov 27 03:29:05 UTC 2024 I: Removing signed pairtools_1.1.0-1_armhf.buildinfo.asc files: removed './b1/pairtools_1.1.0-1_armhf.buildinfo.asc' removed './b2/pairtools_1.1.0-1_armhf.buildinfo.asc'