Thu Apr 25 18:35:37 UTC 2024 I: starting to build packmol/trixie/armhf on jenkins on '2024-04-25 18:35' Thu Apr 25 18:35:37 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_35/1400/console.log Thu Apr 25 18:35:37 UTC 2024 I: Downloading source for trixie/packmol=1:20.14.3-1 --2024-04-25 18:35:37-- http://deb.debian.org/debian/pool/main/p/packmol/packmol_20.14.3-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1927 (1.9K) [text/prs.lines.tag] Saving to: ‘packmol_20.14.3-1.dsc’ 0K . 100% 296M=0s 2024-04-25 18:35:37 (296 MB/s) - ‘packmol_20.14.3-1.dsc’ saved [1927/1927] Thu Apr 25 18:35:37 UTC 2024 I: packmol_20.14.3-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: packmol Binary: packmol Architecture: any Version: 1:20.14.3-1 Maintainer: Debichem Team Uploaders: Drew Parsons Homepage: http://m3g.iqm.unicamp.br/packmol/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/debichem-team/packmol Vcs-Git: https://salsa.debian.org/debichem-team/packmol.git Build-Depends: debhelper-compat (= 13), cmake, gfortran Package-List: packmol deb science optional arch=any Checksums-Sha1: 846f3bb61936da6270ccd70c3f4573db104e9db5 102530 packmol_20.14.3.orig.tar.gz 159c592942d9098810cec46225073710d7d3aa06 2904 packmol_20.14.3-1.debian.tar.xz Checksums-Sha256: c70d8dff6f983adb854cf816df3d4a389b5cc724e70a2430b54793051eaaa4e9 102530 packmol_20.14.3.orig.tar.gz 51163fa0e9701294d31cf114236cdf9e6027239b59036b4fa17b79ee9448d7a6 2904 packmol_20.14.3-1.debian.tar.xz Files: 6a3128e4d2ccdf299ae9a807128be9d6 102530 packmol_20.14.3.orig.tar.gz 57a3d64f80e0a661711887a45f311627 2904 packmol_20.14.3-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmXSYCwACgkQVz7x5L1a AfrMyA//X874Q5yJjx3m0DF6zSD57gB45yuqmj1unX8UsduCeLU+3MCXfHA4XjbF tf4WcBi/uMSNU7xL+Zrm2SsbDiqV8td6lq933rfS626PtjD7vk3yEbTZg1Yni1Ap pSX0gzSx4hraxgENb/IvkJcIBg6yDUSe0RbQvPFf/eIG7hGUgJpuppdy5jsz2PuB yqBKYudfnjUGfmPHUh6zBXxScNfTTk6fy0yqhDG1bGxofgH0xtjlDN7yul/g1WnY eFE5SlvECW76NBFMyALEqMsVk7NsemY8xPmi1zL76vtF64uauW6bKII/zrhDwaNg 2J/ZmwL+riG2qdCh1QaL54/pXDuVnlTC01gJFAcbCuajVmZD/hBepHfdnPVB1J0P k0EDNXu1UONRfYJE60zKT+G6ZI0q5QkjZw17wxZuoTXn9TO7spxwqUSh9xsPDmxD EebvnBoHQdtOQTWb8GDZkAhuFAhgH2ckbPh+lFPtiT3xMuEf+W+6kEedFiS7gBXq 833QDm3i2kYHUPk9/hpPBe097jnFCr26olvT8oE+AFiWYa5NDfOx0yMb5HPfz5nM 0sgjflQrlF+ZeD9v847zM0Q7gcjxrdRxF26P+AQIlKZDNTA3rKeS2KThQTen4iIb f2Ai7VlMCZ8sXjqls/ci+4X8HDuR0IYDxhEXIJ9lFVXV9M/4kGM= =TCx1 -----END PGP SIGNATURE----- Thu Apr 25 18:35:38 UTC 2024 I: Checking whether the package is not for us Thu Apr 25 18:35:38 UTC 2024 I: Starting 1st build on remote node cbxi4pro0-armhf-rb.debian.net. Thu Apr 25 18:35:38 UTC 2024 I: Preparing to do remote build '1' on cbxi4pro0-armhf-rb.debian.net. Thu Apr 25 18:39:24 UTC 2024 I: Deleting $TMPDIR on cbxi4pro0-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Apr 25 06:35:47 -12 2024 I: pbuilder-time-stamp: 1714070147 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [packmol_20.14.3-1.dsc] I: copying [./packmol_20.14.3.orig.tar.gz] I: copying [./packmol_20.14.3-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Feb 18 19:53:16 2024 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./packmol_20.14.3-1.dsc: no acceptable signature found dpkg-source: info: extracting packmol in packmol-20.14.3 dpkg-source: info: unpacking packmol_20.14.3.orig.tar.gz dpkg-source: info: unpacking packmol_20.14.3-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/21542/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='7b127e77ac364a6bafeab293ee0bec42' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='21542' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.BxQRBt4g/pbuilderrc_exdq --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.BxQRBt4g/b1 --logfile b1/build.log packmol_20.14.3-1.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux cbxi4pro0 6.1.0-20-armmp #1 SMP Debian 6.1.85-1 (2024-04-11) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 24 16:16 /bin -> usr/bin I: user script /srv/workspace/pbuilder/21542/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, gfortran dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19468 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-13{a} gfortran-13-arm-linux-gnueabihf{a} gfortran-arm-linux-gnueabihf{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcom-err2{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran-13-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libicu72{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 60 newly installed, 0 to remove and 0 not upgraded. Need to get 37.8 MB of archives. After unpacking 132 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-4 [55.7 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-4 [864 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-2+b1 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf libmagic1 armhf 1:5.45-2+b1 [97.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-2+b1 [42.2 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-3 [1088 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.39.3-6 [81.2 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.0-3 [1367 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b2 [599 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libarchive13 armhf 3.7.2-1 [301 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b3 [284 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.20.1-5+b1 [30.4 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.0-2+b1 [19.3 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.20.1-5+b1 [75.4 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-3 [7908 B] Get: 26 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.20.1-5+b1 [289 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.20.1-5+b1 [112 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-4+b1 [18.2 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-4+b1 [50.1 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libldap-2.5-0 armhf 2.5.13+dfsg-5+b3 [158 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf libnghttp2-14 armhf 1.59.0-1 [62.0 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [55.2 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf libssh2-1 armhf 1.11.0-4 [197 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf libcurl4 armhf 8.5.0-2 [383 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf libjsoncpp25 armhf 1.9.5-6+b2 [69.9 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf librhash0 armhf 1.4.3-3+b1 [143 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf libuv1 armhf 1.48.0-1 [133 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf cmake-data all 3.28.3-1 [2128 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf cmake armhf 3.28.3-1 [5109 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 49 http://deb.debian.org/debian trixie/main armhf libelf1 armhf 0.190-1+b1 [171 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1 [101 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14-20240330-1 [264 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libgfortran-13-dev armhf 13.2.0-23 [306 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf gfortran-13-arm-linux-gnueabihf armhf 13.2.0-23 [8198 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf gfortran-13 armhf 13.2.0-23 [11.2 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf gfortran-arm-linux-gnueabihf armhf 4:13.2.0-7 [1288 B] Get: 60 http://deb.debian.org/debian trixie/main armhf gfortran armhf 4:13.2.0-7 [1432 B] Fetched 37.8 MB in 4s (9516 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19468 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-4_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-4_armhf.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-2+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../04-libmagic1_1%3a5.45-2+b1_armhf.deb ... Unpacking libmagic1:armhf (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-2+b1_armhf.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../07-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-3_armhf.deb ... Unpacking groff-base (1.23.0-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.39.3-6_armhf.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../10-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.12.0-3_armhf.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../17-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../18-libxml2_2.9.14+dfsg-1.3+b2_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package libarchive13:armhf. Preparing to unpack .../19-libarchive13_3.7.2-1_armhf.deb ... Unpacking libarchive13:armhf (3.7.2-1) ... Selecting previously unselected package libbrotli1:armhf. Preparing to unpack .../20-libbrotli1_1.1.0-2+b3_armhf.deb ... Unpacking libbrotli1:armhf (1.1.0-2+b3) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../21-libkrb5support0_1.20.1-5+b1_armhf.deb ... Unpacking libkrb5support0:armhf (1.20.1-5+b1) ... Selecting previously unselected package libcom-err2:armhf. Preparing to unpack .../22-libcom-err2_1.47.0-2+b1_armhf.deb ... Unpacking libcom-err2:armhf (1.47.0-2+b1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../23-libk5crypto3_1.20.1-5+b1_armhf.deb ... Unpacking libk5crypto3:armhf (1.20.1-5+b1) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../24-libkeyutils1_1.6.3-3_armhf.deb ... Unpacking libkeyutils1:armhf (1.6.3-3) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../25-libkrb5-3_1.20.1-5+b1_armhf.deb ... Unpacking libkrb5-3:armhf (1.20.1-5+b1) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../26-libgssapi-krb5-2_1.20.1-5+b1_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.20.1-5+b1) ... Selecting previously unselected package libsasl2-modules-db:armhf. 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I: Building the package I: Running cd /build/reproducible-path/packmol-20.14.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../packmol_20.14.3-1_source.changes dpkg-buildpackage: info: source package packmol dpkg-buildpackage: info: source version 1:20.14.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build dh build --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The Fortran compiler identification is GNU 13.2.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/f95 - skipped -- Configuring done (3.0s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf dh_auto_build -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/packmol-20.14.3 -B/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend make[3]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' cd /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/packmol-20.14.3 /build/reproducible-path/packmol-20.14.3 /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/DependInfo.cmake "--color=" Dependee "/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles/packmol.dir/depend.internal". 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-ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/jacobi.f90 -o CMakeFiles/packmol.dir/src/jacobi.f90.o /build/reproducible-path/packmol-20.14.3/src/gencan.f:62:37: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:62:41: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2593:40: 2593 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2593:33: 2593 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2593:12: 2593 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2592:71: 2592 | +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3827:61: 3827 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3827:54: 3827 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:4:36: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:4:40: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:2989:19: 2989 | +epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5187:19: 5187 | +steabs,inform) | 1 Warning: Unused dummy argument 'inform' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5186:52: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5186:56: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5187:12: 5187 | +steabs,inform) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5186:71: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:5186:64: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'xtmp' at (1) [-Wunused-dummy-argument] /build/reproducible-path/packmol-20.14.3/src/gencan.f:125:25: 125 | subroutine evalhd(n) | 1 Warning: Unused dummy argument 'n' at (1) [-Wunused-dummy-argument] [ 25%] Building Fortran object CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/random.f90 -o CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/cmake -E cmake_copy_f90_mod ahestetic.mod CMakeFiles/packmol.dir/ahestetic.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod sizes.mod CMakeFiles/packmol.dir/sizes.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod exit_codes.mod CMakeFiles/packmol.dir/exit_codes.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod swaptypemod.mod CMakeFiles/packmol.dir/swaptypemod.mod.stamp GNU [ 27%] Building Fortran object CMakeFiles/packmol.dir/src/usegencan.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/usegencan.f90 -o CMakeFiles/packmol.dir/src/usegencan.f90.o [ 30%] Building Fortran object CMakeFiles/packmol.dir/src/title.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/title.f90 -o CMakeFiles/packmol.dir/src/title.f90.o [ 32%] Building Fortran object CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/comparegrad.f90 -o CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/ahestetic.f90.o.provides.build [ 35%] Building Fortran object CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/compute_data.f90 -o CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/exit_codes.f90.o.provides.build [ 37%] Building Fortran object CMakeFiles/packmol.dir/src/flashmod.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/flashmod.f90 -o CMakeFiles/packmol.dir/src/flashmod.f90.o [ 40%] Building Fortran object CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/input.f90 -o CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/sizes.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/swaptypemod.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod usegencan.mod CMakeFiles/packmol.dir/usegencan.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod compute_data.mod CMakeFiles/packmol.dir/compute_data.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod flashsort.mod CMakeFiles/packmol.dir/flashsort.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod input.mod CMakeFiles/packmol.dir/input.mod.stamp GNU /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/usegencan.f90.o.provides.build [ 42%] Building Fortran object CMakeFiles/packmol.dir/src/fparc.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/fparc.f90 -o CMakeFiles/packmol.dir/src/fparc.f90.o [ 45%] Building Fortran object CMakeFiles/packmol.dir/src/gparc.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/gparc.f90 -o CMakeFiles/packmol.dir/src/gparc.f90.o [ 47%] Building Fortran object CMakeFiles/packmol.dir/src/gwalls.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/gwalls.f90 -o CMakeFiles/packmol.dir/src/gwalls.f90.o [ 50%] Building Fortran object CMakeFiles/packmol.dir/src/comprest.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/comprest.f90 -o CMakeFiles/packmol.dir/src/comprest.f90.o [ 52%] Building Fortran object CMakeFiles/packmol.dir/app/packmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/app/packmol.f90 -o CMakeFiles/packmol.dir/app/packmol.f90.o [ 55%] Building Fortran object CMakeFiles/packmol.dir/src/polartocart.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/polartocart.f90 -o CMakeFiles/packmol.dir/src/polartocart.f90.o [ 57%] Building Fortran object CMakeFiles/packmol.dir/src/resetboxes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/resetboxes.f90 -o CMakeFiles/packmol.dir/src/resetboxes.f90.o [ 60%] Building Fortran object CMakeFiles/packmol.dir/src/tobar.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/tobar.f90 -o CMakeFiles/packmol.dir/src/tobar.f90.o [ 62%] Building Fortran object CMakeFiles/packmol.dir/src/setijk.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/setijk.f90 -o CMakeFiles/packmol.dir/src/setijk.f90.o [ 65%] Building Fortran object CMakeFiles/packmol.dir/src/restmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/restmol.f90 -o CMakeFiles/packmol.dir/src/restmol.f90.o [ 67%] Building Fortran object CMakeFiles/packmol.dir/src/swaptype.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/swaptype.f90 -o CMakeFiles/packmol.dir/src/swaptype.f90.o [ 70%] Building Fortran object CMakeFiles/packmol.dir/src/heuristics.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/heuristics.f90 -o CMakeFiles/packmol.dir/src/heuristics.f90.o /build/reproducible-path/packmol-20.14.3/app/packmol.f90:346:44: 346 | iratom(icart,iratcount) = iirest | ^ Warning: 'iirest' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/app/packmol.f90:50:42: 50 | integer :: i, iline, iiatom, iat, iirest, iratcount, ival | ^ note: 'iirest' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: 'alpha' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3243:31: 3243 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'alpha' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: 'dnorm2' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3244:67: 3244 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dnorm2' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: 'dtr' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3244:71: 3244 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dtr' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: 'dtw' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3245:21: 3245 | + dts,dtw,gnorm2,gts,norm2s,q,qamax,qamaxn,qprev,rnorm2, | ^ note: 'dtw' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3354:72: 3354 | beta = rnorm2 / rnorm2prev | ^ Warning: 'rnorm2prev' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3246:24: 3246 | + rnorm2prev,snorm2,snorm2prev | ^ note: 'rnorm2prev' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3502:72: 3502 | amax = min( amax1 , amax2 ) | ^ Warning: 'amax1' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3243:42: 3243 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3503:72: 3503 | amaxn = max( amax1n, amax2n ) | ^ Warning: 'amax1n' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3243:49: 3243 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1n' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3651:72: 3651 | rbdind = rbdposaind | ^ Warning: 'rbdposaind' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3242:56: 3242 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: 'rbdposaind' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:3658:14: 3658 | if ( rbdtype .eq. 1 ) then | ^ Warning: 'rbdposatype' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:3242:68: 3242 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: 'rbdposatype' was declared here [ 72%] Building Fortran object CMakeFiles/packmol.dir/src/computef.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/computef.f90 -o CMakeFiles/packmol.dir/src/computef.f90.o [ 75%] Building Fortran object CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/computeg.f90 -o CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/compute_data.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/flashmod.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/input.f90.o.provides.build [ 77%] Building Fortran object CMakeFiles/packmol.dir/src/cenmass.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/cenmass.f90 -o CMakeFiles/packmol.dir/src/cenmass.f90.o /build/reproducible-path/packmol-20.14.3/src/gencan.f:2140:72: 2140 | delta = max( delmin, 10.0d0 * sqrt( sts ) ) | ^ Warning: 'sts' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:1677:37: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sts' was declared here /build/reproducible-path/packmol-20.14.3/src/gencan.f:2312:35: 2312 | if ( iter .eq. 1 .or. sty .le. 0.0d0 ) then | ^ Warning: 'sty' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/gencan.f:1677:41: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sty' was declared here [ 80%] Building Fortran object CMakeFiles/packmol.dir/src/pgencan.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/pgencan.f90 -o CMakeFiles/packmol.dir/src/pgencan.f90.o [ 82%] Building Fortran object CMakeFiles/packmol.dir/src/initial.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/initial.f90 -o CMakeFiles/packmol.dir/src/initial.f90.o [ 85%] Building Fortran object CMakeFiles/packmol.dir/src/setsizes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/setsizes.f90 -o CMakeFiles/packmol.dir/src/setsizes.f90.o [ 87%] Building Fortran object CMakeFiles/packmol.dir/src/getinp.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/getinp.f90 -o CMakeFiles/packmol.dir/src/getinp.f90.o /build/reproducible-path/packmol-20.14.3/src/getinp.f90:962:11: 962 | if(ires.ne.ireslast) then | ^ Warning: 'ireslast' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/getinp.f90:947:34: 947 | integer :: iread, ires, ireslast, nres, ioerr | ^ note: 'ireslast' was declared here [ 90%] Building Fortran object CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/strlength.f90 -o CMakeFiles/packmol.dir/src/strlength.f90.o [ 92%] Building Fortran object CMakeFiles/packmol.dir/src/output.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/output.f90 -o CMakeFiles/packmol.dir/src/output.f90.o /build/reproducible-path/packmol-20.14.3/src/output.f90:572:32: 572 | nres = ilres - ifres + 1 | ^ Warning: 'ilres' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/packmol-20.14.3/src/output.f90:18:53: 18 | irest, iimol, ichain, iatom, irec, ilres, ifres,& | ^ note: 'ilres' was declared here [ 95%] Building Fortran object CMakeFiles/packmol.dir/src/checkpoint.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/checkpoint.f90 -o CMakeFiles/packmol.dir/src/checkpoint.f90.o [ 97%] Building Fortran object CMakeFiles/packmol.dir/src/writesuccess.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection -Wall -c /build/reproducible-path/packmol-20.14.3/src/writesuccess.f90 -o CMakeFiles/packmol.dir/src/writesuccess.f90.o [100%] Linking Fortran executable packmol /usr/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1 /usr/bin/f95 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/reproducible-path/packmol-20.14.3=. -fstack-protector-strong -fstack-clash-protection CMakeFiles/packmol.dir/src/exit_codes.f90.o CMakeFiles/packmol.dir/src/cenmass.f90.o CMakeFiles/packmol.dir/src/gencan.f.o CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o CMakeFiles/packmol.dir/src/pgencan.f90.o CMakeFiles/packmol.dir/src/initial.f90.o CMakeFiles/packmol.dir/src/title.f90.o CMakeFiles/packmol.dir/src/setsizes.f90.o CMakeFiles/packmol.dir/src/getinp.f90.o CMakeFiles/packmol.dir/src/strlength.f90.o CMakeFiles/packmol.dir/src/output.f90.o CMakeFiles/packmol.dir/src/checkpoint.f90.o CMakeFiles/packmol.dir/src/writesuccess.f90.o CMakeFiles/packmol.dir/src/fparc.f90.o CMakeFiles/packmol.dir/src/gparc.f90.o CMakeFiles/packmol.dir/src/gwalls.f90.o CMakeFiles/packmol.dir/src/comprest.f90.o CMakeFiles/packmol.dir/src/comparegrad.f90.o CMakeFiles/packmol.dir/app/packmol.f90.o CMakeFiles/packmol.dir/src/polartocart.f90.o CMakeFiles/packmol.dir/src/resetboxes.f90.o CMakeFiles/packmol.dir/src/tobar.f90.o CMakeFiles/packmol.dir/src/setijk.f90.o CMakeFiles/packmol.dir/src/setibox.f90.o CMakeFiles/packmol.dir/src/restmol.f90.o CMakeFiles/packmol.dir/src/swaptype.f90.o CMakeFiles/packmol.dir/src/swaptypemod.f90.o CMakeFiles/packmol.dir/src/ahestetic.f90.o CMakeFiles/packmol.dir/src/heuristics.f90.o CMakeFiles/packmol.dir/src/flashsort.f90.o CMakeFiles/packmol.dir/src/jacobi.f90.o CMakeFiles/packmol.dir/src/random.f90.o CMakeFiles/packmol.dir/src/sizes.f90.o CMakeFiles/packmol.dir/src/usegencan.f90.o CMakeFiles/packmol.dir/src/compute_data.f90.o CMakeFiles/packmol.dir/src/flashmod.f90.o CMakeFiles/packmol.dir/src/computef.f90.o CMakeFiles/packmol.dir/src/computeg.f90.o CMakeFiles/packmol.dir/src/input.f90.o -o packmol make[3]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' [100%] Built target packmol make[2]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' dh_auto_test -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/packmol/ -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/packmol-20.14.3/debian/packmol AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/packmol-20.14.3 -B/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/packmol-20.14.3/debian/packmol/usr/bin/packmol make[1]: Leaving directory '/build/reproducible-path/packmol-20.14.3/obj-arm-linux-gnueabihf' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'packmol' in '../packmol_20.14.3-1_armhf.deb'. dpkg-deb: building package 'packmol-dbgsym' in '../packmol-dbgsym_20.14.3-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../packmol_20.14.3-1_armhf.buildinfo dpkg-genchanges --build=binary -O../packmol_20.14.3-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/21542 and its subdirectories I: Current time: Thu Apr 25 06:39:18 -12 2024 I: pbuilder-time-stamp: 1714070358 Thu Apr 25 18:39:27 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt64b-armhf-rb.debian.net. Thu Apr 25 18:39:27 UTC 2024 I: Preparing to do remote build '2' on virt64b-armhf-rb.debian.net. Thu Apr 25 18:41:41 UTC 2024 I: Deleting $TMPDIR on virt64b-armhf-rb.debian.net. Thu Apr 25 18:41:44 UTC 2024 I: packmol_20.14.3-1_armhf.changes: Format: 1.8 Date: Sun, 18 Feb 2024 20:46:27 +0100 Source: packmol Binary: packmol packmol-dbgsym Architecture: armhf Version: 1:20.14.3-1 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Drew Parsons Description: packmol - Initial configurations for Molecular Dynamics Simulations Changes: packmol (1:20.14.3-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: 87caf66b92a1f2428739a0d973bcfe0c9fe404b4 128300 packmol-dbgsym_20.14.3-1_armhf.deb 8afd3f0eae0f4184200c486c5a4092f0a7660338 6114 packmol_20.14.3-1_armhf.buildinfo c516f3446d77fd9dc282c33d6540d87fba3547a4 108200 packmol_20.14.3-1_armhf.deb Checksums-Sha256: ce3caca6014ac6096a05f5d7c3fb4a54c5ae0a126d434e9f0644042021f7f6a9 128300 packmol-dbgsym_20.14.3-1_armhf.deb 4aebfb0bfb2d4373b83c1ada12dd96278890496ebf200dba6f0084ea9f1a15ba 6114 packmol_20.14.3-1_armhf.buildinfo 83845e88f95d69beecda6bf3ac4b39048385bb3e5dc234c4474db7347bc4ac45 108200 packmol_20.14.3-1_armhf.deb Files: 5e1caea75a493045cd364fffc20320ff 128300 debug optional packmol-dbgsym_20.14.3-1_armhf.deb ed4ab0d40d26cb1c289d2a1996c13357 6114 science optional packmol_20.14.3-1_armhf.buildinfo 5ab5c26dce27b7b56c6008a71309b556 108200 science optional packmol_20.14.3-1_armhf.deb Thu Apr 25 18:41:45 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_35-1400.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.BxQRBt4g/packmol_20.14.3-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.BxQRBt4g/packmol_20.14.3-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.BxQRBt4g/packmol_20.14.3-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.BxQRBt4g/b1/packmol_20.14.3-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.BxQRBt4g/b2/packmol_20.14.3-1_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.329s) 0.329s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.017s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 639ms CPU time consumed: 640ms Thu Apr 25 18:41:46 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Thu Apr 25 18:41:46 UTC 2024 I: packmol from trixie built successfully and reproducibly on armhf. Thu Apr 25 18:41:47 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Apr 25 18:41:47 UTC 2024 I: Submitting 8.0K b1/packmol_20.14.3-1_armhf.buildinfo.asc Thu Apr 25 18:41:48 UTC 2024 I: Submitting 8.0K b2/packmol_20.14.3-1_armhf.buildinfo.asc Thu Apr 25 18:41:49 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Apr 25 18:41:49 UTC 2024 I: Done submitting .buildinfo files. Thu Apr 25 18:41:49 UTC 2024 I: Removing signed packmol_20.14.3-1_armhf.buildinfo.asc files: removed './b1/packmol_20.14.3-1_armhf.buildinfo.asc' removed './b2/packmol_20.14.3-1_armhf.buildinfo.asc'