Thu Apr 4 01:28:48 UTC 2024 I: starting to build mcaller/trixie/armhf on jenkins on '2024-04-04 01:28' Thu Apr 4 01:28:48 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_25/3097/console.log Thu Apr 4 01:28:48 UTC 2024 I: Downloading source for trixie/mcaller=1.0.3+git20210624.b415090-3 --2024-04-04 01:28:48-- http://deb.debian.org/debian/pool/main/m/mcaller/mcaller_1.0.3%2bgit20210624.b415090-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2372 (2.3K) [text/prs.lines.tag] Saving to: ‘mcaller_1.0.3+git20210624.b415090-3.dsc’ 0K .. 100% 282M=0s 2024-04-04 01:28:49 (282 MB/s) - ‘mcaller_1.0.3+git20210624.b415090-3.dsc’ saved [2372/2372] Thu Apr 4 01:28:49 UTC 2024 I: mcaller_1.0.3+git20210624.b415090-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mcaller Binary: mcaller Architecture: all Version: 1.0.3+git20210624.b415090-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/al-mcintyre/mCaller Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/mcaller Vcs-Git: https://salsa.debian.org/med-team/mcaller.git Testsuite: autopkgtest, autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-seaborn, python3-biopython, python3-numpy, python3-sklearn Package-List: mcaller deb science optional arch=all Checksums-Sha1: 3581db7c90993a4c321d37aad5ddd80b2dc24a40 6612544 mcaller_1.0.3+git20210624.b415090.orig.tar.xz 54f95a50804acace1e1868a52b555644f13d64b7 7488 mcaller_1.0.3+git20210624.b415090-3.debian.tar.xz Checksums-Sha256: bde75bad7b0cf688084a5ad8a3dd792e4c52419d94c6118f6a4a752a15d4521f 6612544 mcaller_1.0.3+git20210624.b415090.orig.tar.xz 4207438d211679ddbf852aef098fe6a9c98a5331d38f5c9f88c8009bf51667ec 7488 mcaller_1.0.3+git20210624.b415090-3.debian.tar.xz Files: 6d969880db638213a6e7389af1322483 6612544 mcaller_1.0.3+git20210624.b415090.orig.tar.xz c21227868dc517732860621d1140e1ae 7488 mcaller_1.0.3+git20210624.b415090-3.debian.tar.xz Dgit: 09a50931020529c246a06d938d43d3d692f34d17 debian archive/debian/1.0.3+git20210624.b415090-3 https://git.dgit.debian.org/mcaller -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmJpwywUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdp3hRAApkoygpWS3goFgMLJ4Psv8Ssrktsp kBdbJeN5pf9tDbYisX9uN9e4dQbKDEYgUXYmPhI45joXH6vFYlh90mLhJWCmf7WA Qub7f/1U/QV56DTlkAG7zHutP5Dinbf5BxIAIFZGVupqmrSIf2+xMa+THObobJF1 MduWETE4NFr62dGOVQgCcD9CipBC9IUUJAmrhQI4gEgUc2goigvU/0tcgbluAdAm J29lOOYRyY9Sw2IJFTS3JGIN+9KLE24ipK9RGSaT1wAKUW44LpVtjoibjDGZaZ9L mFfP/Z15HS9oxY/5dIfwmnxLuK2d5km6HIcCPKhw9aozs4M0unjjX6FbP2MmyU9P xi1yCNWyegGcLuIpkVSqxyj5efylY9vBpxO5w6gqc4RCiV4z40bqTrSAu7IBAwct 6jnFimdBZ77mlzZqVt3m/MXnHxhTOi7Oo6ZU/DvRpzQdzKX9eI1utLl+poaxCB9Y 0CnZqcvMheHi8J5lmhXy/bEUbyLmKQo4TTOX1TEFMzJGZzKPGI6uznEvevmBkYBP PCJPd0OqNu/KAn18S2vIrf58c9D4m/NnOB7wlBPpGHKHW9vEnqYVJWQ9e1S+rAGK GWqqhF7/Olap92GH9lNEW6u33LkExx0BOdatubL1d3uH3GINNJe8H380GVrvKkIj nusytI3ZJfO/avU= =ulkI -----END PGP SIGNATURE----- Thu Apr 4 01:28:49 UTC 2024 I: Checking whether the package is not for us Thu Apr 4 01:28:49 UTC 2024 I: Starting 1st build on remote node virt32c-armhf-rb.debian.net. Thu Apr 4 01:28:49 UTC 2024 I: Preparing to do remote build '1' on virt32c-armhf-rb.debian.net. Thu Apr 4 01:35:34 UTC 2024 I: Deleting $TMPDIR on virt32c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Apr 3 13:28:58 -12 2024 I: pbuilder-time-stamp: 1712194138 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [mcaller_1.0.3+git20210624.b415090-3.dsc] I: copying [./mcaller_1.0.3+git20210624.b415090.orig.tar.xz] I: copying [./mcaller_1.0.3+git20210624.b415090-3.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Apr 27 22:26:52 2022 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./mcaller_1.0.3+git20210624.b415090-3.dsc: no acceptable signature found dpkg-source: info: extracting mcaller in mcaller-1.0.3+git20210624.b415090 dpkg-source: info: unpacking mcaller_1.0.3+git20210624.b415090.orig.tar.xz dpkg-source: info: unpacking mcaller_1.0.3+git20210624.b415090-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying shebang.patch dpkg-source: info: applying python2to3.patch dpkg-source: info: applying prefixes.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1162/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='6319269607814ef1babc14b81a512bfa' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1162' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3t4OLdRE/pbuilderrc_sxiX --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3t4OLdRE/b1 --logfile b1/build.log mcaller_1.0.3+git20210624.b415090-3.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32c 6.1.0-18-armmp-lpae #1 SMP Debian 6.1.76-1 (2024-02-01) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 3 11:24 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1162/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-seaborn, python3-biopython, python3-numpy, python3-sklearn dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19637 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-seaborn; however: Package python3-seaborn is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-extra{a} fonts-dejavu-mono{a} fonts-lyx{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libcairo2{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libproc2-0{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8{a} libsharpyuv0{a} libsub-override-perl{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} procps{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-appdirs{a} python3-attr{a} python3-biopython{a} python3-brotli{a} python3-cairo{a} python3-chardet{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-distutils{a} python3-fonttools{a} python3-freetype{a} python3-fs{a} python3-joblib{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-mpmath{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pyparsing{a} python3-reportlab{a} python3-rlpycairo{a} python3-scipy{a} python3-seaborn{a} python3-setuptools{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-sympy{a} python3-threadpoolctl{a} python3-tk{a} python3-tz{a} python3-ufolib2{a} python3.11{a} python3.11-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl isympy-common javascript-common libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ psmisc python-biopython-doc python3-bottleneck python3-bs4 python3-cssselect python3-html5lib python3-jinja2 python3-numexpr python3-odf python3-olefile python3-openpyxl python3-patsy python3-psutil python3-pytest python3-simplejson python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 155 newly installed, 0 to remove and 0 not upgraded. Need to get 131 MB of archives. After unpacking 513 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.11-minimal armhf 3.11.8-1 [802 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.5.0-2+b2 [80.2 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.11-minimal armhf 3.11.8-1 [1707 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.11.6-1 [26.2 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024a-1 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-3 [69.1 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libreadline8 armhf 8.2-3+b1 [144 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libpython3.11-stdlib armhf 3.11.8-1 [1709 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf python3.11 armhf 3.11.8-1 [597 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.11.6-1 [9224 B] Get: 13 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.11.6-1 [26.2 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf libpython3.12-minimal armhf 3.12.2-1 [793 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf python3.12-minimal armhf 3.12.2-1 [1845 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf sgml-base all 1.31 [15.4 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-4 [55.7 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-4 [864 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-2+b1 [314 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libmagic1 armhf 1:5.45-2+b1 [97.9 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-2+b1 [42.2 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-3 [1088 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.39.3-6 [81.2 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-1+b2 [33.4 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.0-3 [1367 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf libtcl8.6 armhf 8.6.14+dfsg-1 [928 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b3 [284 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libpng16-16 armhf 1.6.43-1 [262 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf libfreetype6 armhf 2.13.2+dfsg-1+b1 [371 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf libfontenc1 armhf 1:1.1.8-1 [20.6 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf x11-common all 1:7.7+23 [252 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf xfonts-utils armhf 1:7.7+6 [84.5 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 45 http://deb.debian.org/debian trixie/main armhf fontconfig-config armhf 2.15.0-1.1 [317 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libfontconfig1 armhf 2.15.0-1.1 [370 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libbsd0 armhf 0.12.2-1 [127 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.15-1 [140 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.7-1 [328 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.7-1 [735 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.1 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libxft2 armhf 2.3.6-1+b1 [46.4 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b1 [47.8 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libxss1 armhf 1:1.2.3-1 [17.2 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf libtk8.6 armhf 8.6.14-1 [693 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-7 [481 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf blt armhf 2.5.3+dfsg-7 [6024 B] Get: 60 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 67 http://deb.debian.org/debian trixie/main armhf libelf1 armhf 0.190-1+b1 [171 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1 [101 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b2 [599 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf python3-lib2to3 all 3.11.5-1 [77.5 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf python3-distutils all 3.11.5-1 [131 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 68.1.2-2 [241 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf python3-setuptools all 68.1.2-2 [468 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf dh-python all 6.20240310 [106 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-extra all 2.37-8 [1792 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf fonts-lyx all 2.4.0~RC3-1 [189 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf libblas3 armhf 3.12.0-3 [108 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf libpixman-1-0 armhf 0.42.2-1+b1 [476 kB] Get: 84 http://deb.debian.org/debian trixie/main armhf libxcb-render0 armhf 1.15-1 [114 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf libxcb-shm0 armhf 1.15-1 [106 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf libcairo2 armhf 1.18.0-1+b1 [441 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf libdeflate0 armhf 1.20-1 [35.9 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf libfribidi0 armhf 1.0.13-3+b1 [69.4 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14-20240201-3 [263 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf libglib2.0-0 armhf 2.78.4-1 [1281 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf libgraphite2-3 armhf 1.3.14-2 [63.2 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libharfbuzz0b armhf 8.3.0-2 [2155 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf libimagequant0 armhf 2.18.0-1 [30.4 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libjbig0 armhf 2.1-6.1+b1 [27.3 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-2+b2 [143 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf liblapack3 armhf 3.12.0-3 [1803 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1+b1 [25.5 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf liblcms2-2 armhf 2.14-2+b1 [126 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf liblerc4 armhf 4.0.0+ds-4+b1 [137 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf libopenjp2-7 armhf 2.5.0-2+b2 [170 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf libpython3.12-stdlib armhf 3.12.2-1 [1800 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf libqhull-r8.0 armhf 2020.2-6+b1 [219 kB] Get: 105 http://deb.debian.org/debian trixie/main armhf libraqm0 armhf 0.10.1-1+b1 [11.8 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf libsharpyuv0 armhf 1.3.2-0.4 [105 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf libwebp7 armhf 1.3.2-0.4 [261 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf libtiff6 armhf 4.5.1+git230720-4 [301 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf libwebpdemux2 armhf 1.3.2-0.4 [106 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf libwebpmux3 armhf 1.3.2-0.4 [116 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf libxslt1.1 armhf 1.1.35-1 [223 kB] Get: 112 http://deb.debian.org/debian trixie/main armhf python-matplotlib-data all 3.6.3-1 [2744 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf python3.12 armhf 3.12.2-1 [653 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf python3-all armhf 3.11.6-1 [1060 B] Get: 115 http://deb.debian.org/debian trixie/main armhf python3-appdirs all 1.4.4-4 [12.5 kB] Get: 116 http://deb.debian.org/debian trixie/main armhf python3-attr all 23.2.0-2 [65.5 kB] Get: 117 http://deb.debian.org/debian trixie/main armhf python3-numpy armhf 1:1.24.2-2 [4016 kB] Get: 118 http://deb.debian.org/debian trixie/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 119 http://deb.debian.org/debian trixie/main armhf python3-tk armhf 3.11.5-1 [104 kB] Get: 120 http://deb.debian.org/debian trixie/main armhf python3-pil.imagetk armhf 10.2.0-1 [77.3 kB] Get: 121 http://deb.debian.org/debian trixie/main armhf python3-pil armhf 10.2.0-1 [485 kB] Get: 122 http://deb.debian.org/debian trixie/main armhf python3-cairo armhf 1.25.1-2 [130 kB] Get: 123 http://deb.debian.org/debian trixie/main armhf python3-freetype all 2.4.0-1 [80.3 kB] Get: 124 http://deb.debian.org/debian trixie/main armhf python3-rlpycairo all 0.3.0-3 [9904 B] Get: 125 http://deb.debian.org/debian trixie/main armhf python3-reportlab all 4.1.0-1 [674 kB] Get: 126 http://deb.debian.org/debian trixie/main armhf xml-core all 0.19 [20.1 kB] Get: 127 http://deb.debian.org/debian trixie/main armhf w3c-sgml-lib all 1.3-3 [273 kB] Get: 128 http://deb.debian.org/debian trixie/main armhf python3-biopython armhf 1.81+dfsg-3 [1593 kB] Get: 129 http://deb.debian.org/debian trixie/main armhf python3-brotli armhf 1.1.0-2+b3 [304 kB] Get: 130 http://deb.debian.org/debian trixie/main armhf python3-contourpy armhf 1.0.7-3 [231 kB] Get: 131 http://deb.debian.org/debian trixie/main armhf python3-cycler all 0.12.1-1 [9496 B] Get: 132 http://deb.debian.org/debian trixie/main armhf python3-six all 1.16.0-6 [16.3 kB] Get: 133 http://deb.debian.org/debian trixie/main armhf python3-dateutil all 2.9.0-2 [79.4 kB] Get: 134 http://deb.debian.org/debian trixie/main armhf python3-decorator all 5.1.1-5 [15.1 kB] Get: 135 http://deb.debian.org/debian trixie/main armhf python3-scipy armhf 1.11.4-6 [16.9 MB] Get: 136 http://deb.debian.org/debian trixie/main armhf python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get: 137 http://deb.debian.org/debian trixie/main armhf python3-mpmath all 1.3.0-1 [419 kB] Get: 138 http://deb.debian.org/debian trixie/main armhf python3-sympy all 1.12-7 [3869 kB] Get: 139 http://deb.debian.org/debian trixie/main armhf python3-tz all 2024.1-2 [30.9 kB] Get: 140 http://deb.debian.org/debian trixie/main armhf python3-fs all 2.4.16-3 [95.3 kB] Get: 141 http://deb.debian.org/debian trixie/main armhf python3-lxml armhf 5.1.0-1 [1878 kB] Get: 142 http://deb.debian.org/debian trixie/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b3 [24.4 kB] Get: 143 http://deb.debian.org/debian trixie/main armhf unicode-data all 15.1.0-1 [8547 kB] Get: 144 http://deb.debian.org/debian trixie/main armhf python3-fonttools armhf 4.46.0-1 [1536 kB] Get: 145 http://deb.debian.org/debian trixie/main armhf python3-joblib all 1.3.2-2 [218 kB] Get: 146 http://deb.debian.org/debian trixie/main armhf python3-kiwisolver armhf 1.4.4-2 [68.5 kB] Get: 147 http://deb.debian.org/debian trixie/main armhf python3-pyparsing all 3.1.1-1 [145 kB] Get: 148 http://deb.debian.org/debian trixie/main armhf python3-packaging all 23.2-1 [44.8 kB] Get: 149 http://deb.debian.org/debian trixie/main armhf python3-matplotlib armhf 3.6.3-1+b2 [7935 kB] Get: 150 http://deb.debian.org/debian trixie/main armhf python3-pandas-lib armhf 2.1.4+dfsg-5 [7000 kB] Get: 151 http://deb.debian.org/debian trixie/main armhf python3-pandas all 2.1.4+dfsg-5 [3015 kB] Get: 152 http://deb.debian.org/debian trixie/main armhf python3-seaborn all 0.13.2-3 [215 kB] Get: 153 http://deb.debian.org/debian trixie/main armhf python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 154 http://deb.debian.org/debian trixie/main armhf python3-sklearn-lib armhf 1.4.1.post1+dfsg-1 [5564 kB] Get: 155 http://deb.debian.org/debian trixie/main armhf python3-sklearn all 1.4.1.post1+dfsg-1 [2246 kB] Fetched 131 MB in 3s (51.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19637 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.8-1_armhf.deb ... Unpacking libpython3.11-minimal:armhf (3.11.8-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.5.0-2+b2_armhf.deb ... Unpacking libexpat1:armhf (2.5.0-2+b2) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.8-1_armhf.deb ... Unpacking python3.11-minimal (3.11.8-1) ... Setting up libpython3.11-minimal:armhf (3.11.8-1) ... Setting up libexpat1:armhf (2.5.0-2+b2) ... Setting up python3.11-minimal (3.11.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19954 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.6-1_armhf.deb ... Unpacking python3-minimal (3.11.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-1_all.deb ... Unpacking tzdata (2024a-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-3_all.deb ... Unpacking readline-common (8.2-3) ... Selecting previously unselected package libreadline8:armhf. Preparing to unpack .../5-libreadline8_8.2-3+b1_armhf.deb ... Unpacking libreadline8:armhf (8.2-3+b1) ... Selecting previously unselected package libpython3.11-stdlib:armhf. Preparing to unpack .../6-libpython3.11-stdlib_3.11.8-1_armhf.deb ... Unpacking libpython3.11-stdlib:armhf (3.11.8-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.8-1_armhf.deb ... Unpacking python3.11 (3.11.8-1) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../8-libpython3-stdlib_3.11.6-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.11.6-1) ... Setting up python3-minimal (3.11.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20942 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.6-1_armhf.deb ... Unpacking python3 (3.11.6-1) ... Selecting previously unselected package libpython3.12-minimal:armhf. Preparing to unpack .../001-libpython3.12-minimal_3.12.2-1_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.2-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../002-python3.12-minimal_3.12.2-1_armhf.deb ... Unpacking python3.12-minimal (3.12.2-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../003-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:armhf. Preparing to unpack .../004-libproc2-0_2%3a4.0.4-4_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../005-procps_2%3a4.0.4-4_armhf.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../006-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.45-2+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../008-libmagic1_1%3a5.45-2+b1_armhf.deb ... Unpacking libmagic1:armhf (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.45-2+b1_armhf.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../011-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../012-groff-base_1.23.0-3_armhf.deb ... Unpacking groff-base (1.23.0-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../013-bsdextrautils_2.39.3-6_armhf.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../014-libpipeline1_1.5.7-1+b2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-1+b2) ... Selecting previously unselected package man-db. Preparing to unpack .../015-man-db_2.12.0-3_armhf.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../016-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../017-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../018-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../019-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../020-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libtcl8.6:armhf. Preparing to unpack .../021-libtcl8.6_8.6.14+dfsg-1_armhf.deb ... Unpacking libtcl8.6:armhf (8.6.14+dfsg-1) ... Selecting previously unselected package libbrotli1:armhf. Preparing to unpack .../022-libbrotli1_1.1.0-2+b3_armhf.deb ... Unpacking libbrotli1:armhf (1.1.0-2+b3) ... Selecting previously unselected package libpng16-16:armhf. Preparing to unpack .../023-libpng16-16_1.6.43-1_armhf.deb ... Unpacking libpng16-16:armhf (1.6.43-1) ... Selecting previously unselected package libfreetype6:armhf. Preparing to unpack .../024-libfreetype6_2.13.2+dfsg-1+b1_armhf.deb ... Unpacking libfreetype6:armhf (2.13.2+dfsg-1+b1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../025-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../026-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:armhf. Preparing to unpack .../027-libfontenc1_1%3a1.1.8-1_armhf.deb ... Unpacking libfontenc1:armhf (1:1.1.8-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../028-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../029-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../030-xfonts-utils_1%3a7.7+6_armhf.deb ... Unpacking xfonts-utils (1:7.7+6) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../031-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../032-fontconfig-config_2.15.0-1.1_armhf.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:armhf. Preparing to unpack .../033-libfontconfig1_2.15.0-1.1_armhf.deb ... Unpacking libfontconfig1:armhf (2.15.0-1.1) ... Selecting previously unselected package libxau6:armhf. Preparing to unpack .../034-libxau6_1%3a1.0.9-1_armhf.deb ... Unpacking libxau6:armhf (1:1.0.9-1) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../035-libbsd0_0.12.2-1_armhf.deb ... Unpacking libbsd0:armhf (0.12.2-1) ... Selecting previously unselected package libxdmcp6:armhf. Preparing to unpack .../036-libxdmcp6_1%3a1.1.2-3_armhf.deb ... Unpacking libxdmcp6:armhf (1:1.1.2-3) ... Selecting previously unselected package libxcb1:armhf. Preparing to unpack .../037-libxcb1_1.15-1_armhf.deb ... Unpacking libxcb1:armhf (1.15-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../038-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... 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Setting up libjbig0:armhf (2.1-6.1+b1) ... Setting up tzdata (2024a-1) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Apr 4 01:30:20 UTC 2024. Universal Time is now: Thu Apr 4 01:30:20 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up libfontenc1:armhf (1:1.1.8-1) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:armhf (3.12.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libjpeg62-turbo:armhf (1:2.1.5-2+b2) ... Setting up libx11-data (2:1.8.7-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:armhf (1.0.13-3+b1) ... Setting up libimagequant0:armhf (2.18.0-1) ... Setting up libproc2-0:armhf (2:4.0.4-4) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16:armhf (1.6.43-1) ... 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Setting up python3-sklearn-lib:armhf (1.4.1.post1+dfsg-1) ... Setting up python3-pandas (2.1.4+dfsg-5) ... Setting up python3-sklearn (1.4.1.post1+dfsg-1) ... Setting up python3-fonttools (4.46.0-1) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up python3-matplotlib (3.6.3-1+b2) ... Setting up python3-seaborn (0.13.2-3) ... Processing triggers for libc-bin (2.37-15) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.81+dfsg-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/mcaller-1.0.3+git20210624.b415090/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../mcaller_1.0.3+git20210624.b415090-3_source.changes dpkg-buildpackage: info: source package mcaller dpkg-buildpackage: info: source version 1.0.3+git20210624.b415090-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --with python3 debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/mcaller-1.0.3+git20210624.b415090' dh_auto_clean #rm -f model_NN_6_m6A.pkl testdata/masonread1.eventalign.diffs.6 testdata/masonread1.eventalign.diffs.6.train rm -rf __pycache__ rm -f model_NN_6_m6A.pkl make[1]: Leaving directory '/build/reproducible-path/mcaller-1.0.3+git20210624.b415090' dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/mcaller-1.0.3+git20210624.b415090' cp -a testdata testdata_save ./mCaller.py -p testdata/test_positions_A.txt -r testdata/pb_ecoli_polished_assembly.fasta -e testdata/masonread1.eventalign.tsv -d r95_twobase_model_NN_6_m6A.pkl -f testdata/masonread1.fastq testdata/ 1 contigs 1 threads thread finished processing...: 35 observations 35 positions 0 regions with multiple methylated bases 0 observations with skips included 8 observations with too many skips Finished extracting signals ./mCaller.py -p testdata/test_positions_m6A.txt -r testdata/pb_ecoli_polished_assembly.fasta -e testdata/masonread1.eventalign.tsv -d r95_twobase_model_NN_6_m6A.pkl -f testdata/masonread1.fastq testdata/ 1 contigs 1 threads thread finished processing...: 9 observations 9 positions 0 regions with multiple methylated bases 0 observations with skips included 2 observations with too many skips Finished extracting signals ./mCaller.py -p testdata/test_positions.txt -r testdata/pb_ecoli_polished_assembly.fasta -e testdata/masonread1.eventalign.tsv -t 4 --train -f testdata/masonread1.fastq testdata/ 1 contigs 4 threads thread finished processing...: 9 observations 9 positions 0 regions with multiple methylated bases 0 observations with skips included 4 observations with too many skips Error: could not find sequence for reference contig li thread finished processing...: 16 observations 16 positions 0 regions with multiple methylated bases 0 observations with skips included 6 observations with too many skips thread finished processing...: 28 observations 28 positions 0 regions with multiple methylated bases 0 observations with skips included 6 observations with too many skips thread finished processing...: 44 observations 44 positions 1 regions with multiple methylated bases 0 observations with skips included 10 observations with too many skips Finished extracting signals Merging files... Training... ['A', 'A', 'A', 'A', 'A', 'A', 'A', 'A', 'A', 'A'] [[-0.18999999999999992, -1.6799999999999997, -2.3, 0.56, -1.41, 1.48, 7.055265349382997], [-1.1300000000000001, -1.67, -1.1, -0.5774999999999999, 0.42, 1.0225, 7.055265349382997], [0.0050000000000000044, -0.29500000000000004, -0.54, 3.96, 1.47, 0.06499999999999995, 7.055265349382997], [3.255, 3.925, 0.03999999999999998, -0.15599999999999997, -1.01, 1.3533333333333333, 7.055265349382997], [-0.07999999999999996, -1.3666666666666665, 0.84, -0.5449999999999999, -3.22, -1.53, 7.055265349382997], [-1.74, -2.56, -2.0774999999999997, 1.84, -0.09999999999999998, -0.3, 7.055265349382997], [1.92, 2.75, 1.59, 1.6433333333333333, 1.59, 1.27, 7.055265349382997], [-2.15, 1.8849999999999998, 2.58, -0.36, 4.26, -2.4625, 7.055265349382997], [1.485, 4.095000000000001, -1.12, -0.91, -0.62, 1.17, 7.055265349382997], [1.095, 0.78, -2.38, 1.47, -1.7149999999999999, -0.8283333333333335, 7.055265349382997]] ['GGATTMTTTCA', 'CTGGAMAAAGC', 'GGGCCMTTACC', 'GGTGGMTGAAT', 'GGTTAMCGCGT', 'TGTGGMGAAAC', 'AGAACMCTTTC', 'AGGCCMTTCAA', 'AATCAMAAGAA', 'TACTTMCCGCA'] NN general model scores: 0.875,0.375,0.25,1.0,0.625 Cross validation accuracy: 0.62 (+/- 0.57) Finished training rm -rf testdata mv testdata_save testdata make[1]: Leaving directory '/build/reproducible-path/mcaller-1.0.3+git20210624.b415090' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/mcaller/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_python3 dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package mcaller: substitution variable ${python3:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'mcaller' in '../mcaller_1.0.3+git20210624.b415090-3_all.deb'. dpkg-genbuildinfo --build=binary -O../mcaller_1.0.3+git20210624.b415090-3_armhf.buildinfo dpkg-genchanges --build=binary -O../mcaller_1.0.3+git20210624.b415090-3_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1162 and its subdirectories I: Current time: Wed Apr 3 13:35:29 -12 2024 I: pbuilder-time-stamp: 1712194529 Thu Apr 4 01:35:37 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt64z-armhf-rb.debian.net. Thu Apr 4 01:35:37 UTC 2024 I: Preparing to do remote build '2' on virt64z-armhf-rb.debian.net. Thu Apr 4 01:39:56 UTC 2024 I: Deleting $TMPDIR on virt64z-armhf-rb.debian.net. Thu Apr 4 01:39:59 UTC 2024 I: mcaller_1.0.3+git20210624.b415090-3_armhf.changes: Format: 1.8 Date: Thu, 28 Apr 2022 00:24:38 +0200 Source: mcaller Binary: mcaller Architecture: all Version: 1.0.3+git20210624.b415090-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: mcaller - find methylation in nanopore reads Changes: mcaller (1.0.3+git20210624.b415090-3) unstable; urgency=medium . * Team upload. * d/t/control: declare test unsupported on S390x Checksums-Sha1: feb6bdc9e8036b5bdde424a53554c27fa3496d5f 18984 mcaller_1.0.3+git20210624.b415090-3_all.deb a5f8c04735d2071df5803e106f65fa87d5305eea 8907 mcaller_1.0.3+git20210624.b415090-3_armhf.buildinfo Checksums-Sha256: 0b7e322886b6f13c891a65fe9461c678e1839a5a5a841596269ca96f8b8a2cc7 18984 mcaller_1.0.3+git20210624.b415090-3_all.deb ea8833f18aae804b64d1f0ca33ffd0bf98d7f6534378765d9a7b3aadd976ddcc 8907 mcaller_1.0.3+git20210624.b415090-3_armhf.buildinfo Files: a8c24d9e9a52cea806516b5c50368ea0 18984 science optional mcaller_1.0.3+git20210624.b415090-3_all.deb 089f984d3a4591eb4b039172156cc5f0 8907 science optional mcaller_1.0.3+git20210624.b415090-3_armhf.buildinfo Thu Apr 4 01:40:00 UTC 2024 I: diffoscope 262 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_25-3097.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.3t4OLdRE/mcaller_1.0.3+git20210624.b415090-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.3t4OLdRE/mcaller_1.0.3+git20210624.b415090-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.3t4OLdRE/mcaller_1.0.3+git20210624.b415090-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.3t4OLdRE/b1/mcaller_1.0.3+git20210624.b415090-3_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.3t4OLdRE/b2/mcaller_1.0.3+git20210624.b415090-3_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.314s) 0.314s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.013s) 0.013s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 618ms CPU time consumed: 616ms Thu Apr 4 01:40:01 UTC 2024 I: diffoscope 262 found no differences in the changes files, and a .buildinfo file also exists. Thu Apr 4 01:40:01 UTC 2024 I: mcaller from trixie built successfully and reproducibly on armhf. Thu Apr 4 01:40:02 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Apr 4 01:40:02 UTC 2024 I: Submitting 12K b1/mcaller_1.0.3+git20210624.b415090-3_armhf.buildinfo.asc Thu Apr 4 01:40:03 UTC 2024 I: Submitting 12K b2/mcaller_1.0.3+git20210624.b415090-3_armhf.buildinfo.asc Thu Apr 4 01:40:05 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Apr 4 01:40:05 UTC 2024 I: Done submitting .buildinfo files. Thu Apr 4 01:40:05 UTC 2024 I: Removing signed mcaller_1.0.3+git20210624.b415090-3_armhf.buildinfo.asc files: removed './b1/mcaller_1.0.3+git20210624.b415090-3_armhf.buildinfo.asc' removed './b2/mcaller_1.0.3+git20210624.b415090-3_armhf.buildinfo.asc'