Mon Jul 29 06:32:04 UTC 2024 I: starting to build libssw/trixie/armhf on jenkins on '2024-07-29 06:31' Mon Jul 29 06:32:04 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_3/7877/console.log Mon Jul 29 06:32:04 UTC 2024 I: Downloading source for trixie/libssw=1.1-15 --2024-07-29 06:32:04-- http://deb.debian.org/debian/pool/main/libs/libssw/libssw_1.1-15.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2509 (2.5K) [text/prs.lines.tag] Saving to: ‘libssw_1.1-15.dsc’ 0K .. 100% 322M=0s 2024-07-29 06:32:04 (322 MB/s) - ‘libssw_1.1-15.dsc’ saved [2509/2509] Mon Jul 29 06:32:04 UTC 2024 I: libssw_1.1-15.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libssw Binary: libssw0, libssw-dev, libssw-java, ssw-align Architecture: any Version: 1.1-15 Maintainer: Debian Med Packaging Team Uploaders: Sascha Steinbiss , Michael R. Crusoe Homepage: https://github.com/mengyao/Complete-Striped-Smith-Waterman-Library Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/libssw Vcs-Git: https://salsa.debian.org/med-team/libssw.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, default-jdk-headless, zlib1g-dev Build-Depends: debhelper (>= 12~), debhelper-compat (= 13), default-jdk-headless , javahelper , help2man, zlib1g-dev, libsimde-dev, maven-repo-helper Package-List: libssw-dev deb libdevel optional arch=any libssw-java deb java optional arch=any profile=!nojava libssw0 deb libs optional arch=any ssw-align deb science optional arch=any Checksums-Sha1: 4df851ffd023f201b3ba7794a1c8c67730e098f4 12325368 libssw_1.1.orig.tar.gz 49eca4dda657abb5c7064945f83cb18c53a95c1f 54308 libssw_1.1-15.debian.tar.xz Checksums-Sha256: cdbc20740daeb188ed39413ea5ff9ae4cf72c4d7ccff1d2de2cac0446d64d99f 12325368 libssw_1.1.orig.tar.gz b036bff04c285d5339b268bb0a0b4c9cde81f24128968b51dd0a7d0de635f140 54308 libssw_1.1-15.debian.tar.xz Files: d968cd252eaa21552725829e1da94de2 12325368 libssw_1.1.orig.tar.gz 44fb8d3c149cd1bb9fa71d9425417155 54308 libssw_1.1-15.debian.tar.xz Dgit: 4bb5873137ec6961ee756cf6bf00aebee7601e5f debian archive/debian/1.1-15 https://git.dgit.debian.org/libssw -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmaf+lgUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdpdhQ//aIHLlx/1azN8PHPPmzZMX9snq1aZ fKMnSizAUnW4BERdh5YlnIhZiqA6F/pASR8LAKhmQ98yXGpfP8IUX8CUoNSmOh59 NAOxY+KXcUsvMd8pWJUF3Ax2OSPvon1urJauazPesJG4GKRuRLVi1QBA6ibNk4ro hemc69BjADV6OWUwTFItwgWGbJeEv3YYU3Jw1JU8AzvEzVZ+Mv5YfNHvdWP1Ax1n 1kLv96grONsE2DhZQIvzV3B8LT9w66bmOX4DI4axK2jUjYLdwWreAvmdy/EliuUS 6/7SXBCGegYFnVfReOEgjjWpCNjAeZ7zlC7hAcTNP25+UFZbTwiZxAo1S4jxwFBs Jc+rg7mQu3IwugHh/jUkETGkhM5pZGetOmgYJrTWWL3Njcv/v71eRSkVSbjxUS2B 2nV+4Ri4G/r3aLbnqQAkwYV7D1Uho+r1p/RS0UD7qxSiOANFgS6XizwYZy7WT8xy WCgLBgxAYtZm2BaPuJAi++Em08DnMOTTgJKs+yTUHzakMjYpHQd7qHazhN8X3L80 tFAdD0nRDseviloPhk0WaG0gC7n4URxWudJB+3l/VvQWK9Uqd4RJBbOJVO6oBXHB R49i59bprvWmj9AnW92p4LHLjOeaR/F4yKWHx+GNGSXPHgkpav/dsDAuecl4KAk6 qrVd5t0YQFOAYmc= =o+AQ -----END PGP SIGNATURE----- Mon Jul 29 06:32:04 UTC 2024 I: Checking whether the package is not for us Mon Jul 29 06:32:04 UTC 2024 I: Starting 1st build on remote node ff4a-armhf-rb.debian.net. Mon Jul 29 06:32:04 UTC 2024 I: Preparing to do remote build '1' on ff4a-armhf-rb.debian.net. Mon Jul 29 06:45:46 UTC 2024 I: Deleting $TMPDIR on ff4a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jul 28 18:32:11 -12 2024 I: pbuilder-time-stamp: 1722234731 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libssw_1.1-15.dsc] I: copying [./libssw_1.1.orig.tar.gz] I: copying [./libssw_1.1-15.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Jul 23 18:45:44 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libssw_1.1-15.dsc: no acceptable signature found dpkg-source: info: extracting libssw in libssw-1.1 dpkg-source: info: unpacking libssw_1.1.orig.tar.gz dpkg-source: info: unpacking libssw_1.1-15.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build_all_libs.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying rename_tool.patch dpkg-source: info: applying simde.patch dpkg-source: info: applying malloc I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/16111/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='fadb1a3eda244952b4cb0d2e75a2069b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='16111' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.KQFfqLd0/pbuilderrc_ZJJA --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.KQFfqLd0/b1 --logfile b1/build.log libssw_1.1-15.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux ff4a 6.1.0-23-armmp-lpae #1 SMP Debian 6.1.99-1 (2024-07-15) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 5 22:35 /bin -> usr/bin I: user script /srv/workspace/pbuilder/16111/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 12~), debhelper-compat (= 13), default-jdk-headless, javahelper, help2man, zlib1g-dev, libsimde-dev, maven-repo-helper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19503 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 12~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on default-jdk-headless; however: Package default-jdk-headless is not installed. pbuilder-satisfydepends-dummy depends on javahelper; however: Package javahelper is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on maven-repo-helper; however: Package maven-repo-helper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} binfmt-support{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} dctrl-tools{a} debhelper{a} default-jdk-headless{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dirmngr{a} dwz{a} fastjar{a} file{a} gettext{a} gettext-base{a} gnupg{a} gnupg-l10n{a} gpg{a} gpg-agent{a} gpgconf{a} gpgsm{a} groff-base{a} help2man{a} intltool-debian{a} jarwrapper{a} java-common{a} javahelper{a} libarchive-zip-perl{a} libassuan0{a} libb-hooks-op-check-perl{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libdebhelper-perl{a} libdevel-callchecker-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libexpat1{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libimport-into-perl{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libipc-run-perl{a} libjpeg62-turbo{a} libksba8{a} liblcms2-2{a} libldap-2.5-0{a} liblocale-gettext-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmodule-runtime-perl{a} libmoo-perl{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnpth0t64{a} libnspr4{a} libnss3{a} libparams-classify-perl{a} libpcsclite1{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} librole-tiny-perl{a} libsasl2-2{a} libsasl2-modules-db{a} libsimde-dev{a} libsub-quote-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml2{a} m4{a} man-db{a} maven-repo-helper{a} media-types{a} netbase{a} openjdk-17-jdk-headless{a} openjdk-17-jre-headless{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} po-debconf{a} python3{a} python3-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} wdiff{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl debian-keyring dput dput-ng dupload equivs gnupg-utils gpg-wks-client libarchive-cpio-perl libasound2t64 libcups2t64 libdata-dump-perl libdistro-info-perl libfontconfig1 libfreetype6 libgit-wrapper-perl libgitlab-api-v4-perl libharfbuzz0b libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libio-compress-brotli-perl libjson-perl libldap-common liblist-compare-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libnamespace-clean-perl libsasl2-modules libsoap-lite-perl libstring-shellquote-perl libxstring-perl licensecheck lintian lynx pristine-tar python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg strace unzip wget 0 packages upgraded, 121 newly installed, 0 to remove and 0 not upgraded. Need to get 142 MB of archives. After unpacking 363 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf binfmt-support armhf 2.2.2-7 [55.3 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf liblocale-gettext-perl armhf 1.07-7 [14.4 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf libpython3.12-minimal armhf 3.12.4-3 [798 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf python3.12-minimal armhf 3.12.4-3 [1795 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.12.3-1 [26.5 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf tzdata all 2024a-4 [255 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-4 [69.3 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-4 [145 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf libpython3.12-stdlib armhf 3.12.4-3 [1812 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf python3.12 armhf 3.12.4-3 [664 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.12.3-1 [9472 B] Get: 16 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.12.3-1 [27.5 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.2.2-1 [1329 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-1 [195 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-1 [87.8 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.1-2 [1376 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-1 [723 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf ca-certificates-java all 20240118 [11.6 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf dctrl-tools armhf 2.24-3 [96.0 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.16 [88.6 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 41 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-2 [183 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5 [9075 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-1 [1479 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf debhelper all 13.16 [891 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf java-common all 0.75 [6640 B] Get: 50 http://deb.debian.org/debian trixie/main armhf liblcms2-2 armhf 2.14-2+b1 [126 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-3 [143 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libnspr4 armhf 2:4.35-1.1+b1 [87.2 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libnss3 armhf 2:3.102-1 [1148 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libpcsclite1 armhf 2.2.3-1 [51.0 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf openjdk-17-jre-headless armhf 17.0.12+7-1 [38.3 MB] Get: 56 http://deb.debian.org/debian trixie/main armhf default-jre-headless armhf 2:1.17-75 [3068 B] Get: 57 http://deb.debian.org/debian trixie/main armhf openjdk-17-jdk-headless armhf 17.0.12+7-1 [67.6 MB] Get: 58 http://deb.debian.org/debian trixie/main armhf default-jdk-headless armhf 2:1.17-75 [1108 B] Get: 59 http://deb.debian.org/debian trixie/main armhf libassuan0 armhf 2.5.6-1+b1 [43.8 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf gpgconf armhf 2.2.43-7 [103 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libksba8 armhf 1.6.7-2 [112 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-6 [18.0 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-6 [50.1 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf libldap-2.5-0 armhf 2.5.18+dfsg-2 [162 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libnpth0t64 armhf 1.6-3.1 [16.9 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf dirmngr armhf 2.2.43-7 [320 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf gnupg-l10n all 2.2.43-7 [701 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf gpg armhf 2.2.43-7 [459 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf pinentry-curses armhf 1.2.1-3+b2 [74.2 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf gpg-agent armhf 2.2.43-7 [208 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf gpgsm armhf 2.2.43-7 [216 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf gnupg all 2.2.43-7 [375 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf libfile-dirlist-perl all 0.05-3 [7600 B] Get: 74 http://deb.debian.org/debian trixie/main armhf libfile-which-perl all 1.27-2 [15.1 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf libfile-touch-perl all 0.12-2 [8816 B] Get: 77 http://deb.debian.org/debian trixie/main armhf libio-pty-perl armhf 1:1.20-1+b1 [33.9 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf libipc-run-perl all 20231003.0-2 [101 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf libclass-xsaccessor-perl armhf 1.19-4+b3 [35.4 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf libb-hooks-op-check-perl armhf 0.22-3+b1 [10.2 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf libdevel-callchecker-perl armhf 0.009-1 [15.7 kB] Get: 84 http://deb.debian.org/debian trixie/main armhf libparams-classify-perl armhf 0.015-2+b3 [21.3 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf libmodule-runtime-perl all 0.016-2 [19.6 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf libimport-into-perl all 1.002005-2 [11.3 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf librole-tiny-perl all 2.002004-1 [21.4 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf libsub-quote-perl all 2.006008-1 [21.8 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf libmoo-perl all 2.005005-1 [58.0 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf libencode-locale-perl all 1.05-3 [12.9 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf libtimedate-perl all 2.3300-2 [39.3 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libhttp-date-perl all 6.06-1 [10.7 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf libfile-listing-perl all 6.16-1 [12.4 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf liburi-perl all 5.28-1 [98.6 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf libhtml-parser-perl armhf 3.82-1 [95.6 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf libhtml-tree-perl all 5.07-3 [211 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf libclone-perl armhf 0.46-1+b2 [13.1 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf libio-html-perl all 1.004-3 [16.2 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf libhttp-message-perl all 6.46-1 [79.7 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf perl-openssl-defaults armhf 7+b2 [6708 B] Get: 105 http://deb.debian.org/debian trixie/main armhf libnet-ssleay-perl armhf 1.94-1+b1 [319 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf libio-socket-ssl-perl all 2.088-1 [222 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf libnet-http-perl all 6.23-1 [23.9 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf libwww-perl all 6.77-1 [183 kB] Get: 112 http://deb.debian.org/debian trixie/main armhf patchutils armhf 0.4.2-1 [72.5 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf wdiff armhf 1.2.2-6 [118 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf devscripts all 2.23.7 [1068 kB] Get: 115 http://deb.debian.org/debian trixie/main armhf fastjar armhf 2:0.98-7 [43.9 kB] Get: 116 http://deb.debian.org/debian trixie/main armhf help2man armhf 1.49.3 [198 kB] Get: 117 http://deb.debian.org/debian trixie/main armhf jarwrapper all 0.80 [9692 B] Get: 118 http://deb.debian.org/debian trixie/main armhf javahelper all 0.80 [80.4 kB] Get: 119 http://deb.debian.org/debian trixie/main armhf libsimde-dev all 0.8.2-1 [465 kB] Get: 120 http://deb.debian.org/debian trixie/main armhf maven-repo-helper all 1.11 [142 kB] Get: 121 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1 [904 kB] Fetched 142 MB in 9s (16.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpipeline1:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19503 files and directories currently installed.) Preparing to unpack .../0-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package binfmt-support. Preparing to unpack .../1-binfmt-support_2.2.2-7_armhf.deb ... Unpacking binfmt-support (2.2.2-7) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../2-liblocale-gettext-perl_1.07-7_armhf.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package libpython3.12-minimal:armhf. Preparing to unpack .../3-libpython3.12-minimal_3.12.4-3_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.4-3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../4-libexpat1_2.6.2-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.2-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../5-python3.12-minimal_3.12.4-3_armhf.deb ... Unpacking python3.12-minimal (3.12.4-3) ... Setting up libpython3.12-minimal:armhf (3.12.4-3) ... Setting up libexpat1:armhf (2.6.2-1) ... Setting up python3.12-minimal (3.12.4-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19860 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.12.3-1_armhf.deb ... Unpacking python3-minimal (3.12.3-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../5-libreadline8t64_8.2-4_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-4) ... Selecting previously unselected package libpython3.12-stdlib:armhf. Preparing to unpack .../6-libpython3.12-stdlib_3.12.4-3_armhf.deb ... Unpacking libpython3.12-stdlib:armhf (3.12.4-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../7-python3.12_3.12.4-3_armhf.deb ... Unpacking python3.12 (3.12.4-3) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../8-libpython3-stdlib_3.12.3-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.12.3-1) ... Setting up python3-minimal (3.12.3-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20862 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.3-1_armhf.deb ... Unpacking python3 (3.12.3-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.2.2-1_armhf.deb ... Unpacking openssl (3.2.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../005-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.22.5-1_armhf.deb ... Unpacking gettext-base (0.22.5-1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../008-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-5_armhf.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.40.2-1_armhf.deb ... Unpacking bsdextrautils (2.40.2-1) ... Selecting previously unselected package man-db. Preparing to unpack .../011-man-db_2.12.1-2_armhf.deb ... Unpacking man-db (2.12.1-2) ... Selecting previously unselected package m4. Preparing to unpack .../012-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../013-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../014-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../015-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../016-autopoint_0.22.5-1_all.deb ... Unpacking autopoint (0.22.5-1) ... Selecting previously unselected package ca-certificates-java. Preparing to unpack .../017-ca-certificates-java_20240118_all.deb ... Unpacking ca-certificates-java (20240118) ... Selecting previously unselected package dctrl-tools. Preparing to unpack .../018-dctrl-tools_2.24-3_armhf.deb ... Unpacking dctrl-tools (2.24-3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../019-libdebhelper-perl_13.16_all.deb ... Unpacking libdebhelper-perl (13.16) ... Selecting previously unselected package libtool. Preparing to unpack .../020-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../021-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../022-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../023-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../024-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../025-libelf1t64_0.191-2_armhf.deb ... Unpacking libelf1t64:armhf (0.191-2) ... Selecting previously unselected package dwz. Preparing to unpack .../026-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../027-libicu72_72.1-5_armhf.deb ... Unpacking libicu72:armhf (72.1-5) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../028-libxml2_2.9.14+dfsg-1.3+b3_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../029-gettext_0.22.5-1_armhf.deb ... Unpacking gettext (0.22.5-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../030-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../031-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../032-debhelper_13.16_all.deb ... Unpacking debhelper (13.16) ... Selecting previously unselected package java-common. Preparing to unpack .../033-java-common_0.75_all.deb ... Unpacking java-common (0.75) ... Selecting previously unselected package liblcms2-2:armhf. Preparing to unpack .../034-liblcms2-2_2.14-2+b1_armhf.deb ... Unpacking liblcms2-2:armhf (2.14-2+b1) ... Selecting previously unselected package libjpeg62-turbo:armhf. Preparing to unpack .../035-libjpeg62-turbo_1%3a2.1.5-3_armhf.deb ... Unpacking libjpeg62-turbo:armhf (1:2.1.5-3) ... Selecting previously unselected package libnspr4:armhf. Preparing to unpack .../036-libnspr4_2%3a4.35-1.1+b1_armhf.deb ... Unpacking libnspr4:armhf (2:4.35-1.1+b1) ... Selecting previously unselected package libnss3:armhf. Preparing to unpack .../037-libnss3_2%3a3.102-1_armhf.deb ... Unpacking libnss3:armhf (2:3.102-1) ... Selecting previously unselected package libpcsclite1:armhf. Preparing to unpack .../038-libpcsclite1_2.2.3-1_armhf.deb ... Unpacking libpcsclite1:armhf (2.2.3-1) ... Selecting previously unselected package openjdk-17-jre-headless:armhf. Preparing to unpack .../039-openjdk-17-jre-headless_17.0.12+7-1_armhf.deb ... Unpacking openjdk-17-jre-headless:armhf (17.0.12+7-1) ... Selecting previously unselected package default-jre-headless. Preparing to unpack .../040-default-jre-headless_2%3a1.17-75_armhf.deb ... Unpacking default-jre-headless (2:1.17-75) ... Selecting previously unselected package openjdk-17-jdk-headless:armhf. Preparing to unpack .../041-openjdk-17-jdk-headless_17.0.12+7-1_armhf.deb ... Unpacking openjdk-17-jdk-headless:armhf (17.0.12+7-1) ... Selecting previously unselected package default-jdk-headless. Preparing to unpack .../042-default-jdk-headless_2%3a1.17-75_armhf.deb ... Unpacking default-jdk-headless (2:1.17-75) ... Selecting previously unselected package libassuan0:armhf. Preparing to unpack .../043-libassuan0_2.5.6-1+b1_armhf.deb ... Unpacking libassuan0:armhf (2.5.6-1+b1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../044-gpgconf_2.2.43-7_armhf.deb ... Unpacking gpgconf (2.2.43-7) ... Selecting previously unselected package libksba8:armhf. Preparing to unpack .../045-libksba8_1.6.7-2_armhf.deb ... Unpacking libksba8:armhf (1.6.7-2) ... Selecting previously unselected package libsasl2-modules-db:armhf. Preparing to unpack .../046-libsasl2-modules-db_2.1.28+dfsg1-6_armhf.deb ... Unpacking libsasl2-modules-db:armhf (2.1.28+dfsg1-6) ... Selecting previously unselected package libsasl2-2:armhf. Preparing to unpack .../047-libsasl2-2_2.1.28+dfsg1-6_armhf.deb ... Unpacking libsasl2-2:armhf (2.1.28+dfsg1-6) ... Selecting previously unselected package libldap-2.5-0:armhf. Preparing to unpack .../048-libldap-2.5-0_2.5.18+dfsg-2_armhf.deb ... Unpacking libldap-2.5-0:armhf (2.5.18+dfsg-2) ... Selecting previously unselected package libnpth0t64:armhf. Preparing to unpack .../049-libnpth0t64_1.6-3.1_armhf.deb ... Unpacking libnpth0t64:armhf (1.6-3.1) ... Selecting previously unselected package dirmngr. Preparing to unpack .../050-dirmngr_2.2.43-7_armhf.deb ... Unpacking dirmngr (2.2.43-7) ... Selecting previously unselected package gnupg-l10n. Preparing to unpack .../051-gnupg-l10n_2.2.43-7_all.deb ... Unpacking gnupg-l10n (2.2.43-7) ... Selecting previously unselected package gpg. Preparing to unpack .../052-gpg_2.2.43-7_armhf.deb ... Unpacking gpg (2.2.43-7) ... Selecting previously unselected package pinentry-curses. Preparing to unpack .../053-pinentry-curses_1.2.1-3+b2_armhf.deb ... Unpacking pinentry-curses (1.2.1-3+b2) ... Selecting previously unselected package gpg-agent. Preparing to unpack .../054-gpg-agent_2.2.43-7_armhf.deb ... Unpacking gpg-agent (2.2.43-7) ... Selecting previously unselected package gpgsm. Preparing to unpack .../055-gpgsm_2.2.43-7_armhf.deb ... Unpacking gpgsm (2.2.43-7) ... Selecting previously unselected package gnupg. Preparing to unpack .../056-gnupg_2.2.43-7_all.deb ... Unpacking gnupg (2.2.43-7) ... Selecting previously unselected package libfile-dirlist-perl. Preparing to unpack .../057-libfile-dirlist-perl_0.05-3_all.deb ... Unpacking libfile-dirlist-perl (0.05-3) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../058-libfile-which-perl_1.27-2_all.deb ... Unpacking libfile-which-perl (1.27-2) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../059-libfile-homedir-perl_1.006-2_all.deb ... Unpacking libfile-homedir-perl (1.006-2) ... Selecting previously unselected package libfile-touch-perl. Preparing to unpack .../060-libfile-touch-perl_0.12-2_all.deb ... Unpacking libfile-touch-perl (0.12-2) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../061-libio-pty-perl_1%3a1.20-1+b1_armhf.deb ... Unpacking libio-pty-perl (1:1.20-1+b1) ... Selecting previously unselected package libipc-run-perl. Preparing to unpack .../062-libipc-run-perl_20231003.0-2_all.deb ... Unpacking libipc-run-perl (20231003.0-2) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../063-libclass-method-modifiers-perl_2.15-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.15-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../064-libclass-xsaccessor-perl_1.19-4+b3_armhf.deb ... Unpacking libclass-xsaccessor-perl (1.19-4+b3) ... Selecting previously unselected package libb-hooks-op-check-perl:armhf. Preparing to unpack .../065-libb-hooks-op-check-perl_0.22-3+b1_armhf.deb ... Unpacking libb-hooks-op-check-perl:armhf (0.22-3+b1) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../066-libdynaloader-functions-perl_0.003-3_all.deb ... Unpacking libdynaloader-functions-perl (0.003-3) ... Selecting previously unselected package libdevel-callchecker-perl:armhf. Preparing to unpack .../067-libdevel-callchecker-perl_0.009-1_armhf.deb ... Unpacking libdevel-callchecker-perl:armhf (0.009-1) ... Selecting previously unselected package libparams-classify-perl:armhf. Preparing to unpack .../068-libparams-classify-perl_0.015-2+b3_armhf.deb ... Unpacking libparams-classify-perl:armhf (0.015-2+b3) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../069-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../070-libimport-into-perl_1.002005-2_all.deb ... Unpacking libimport-into-perl (1.002005-2) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../071-librole-tiny-perl_2.002004-1_all.deb ... Unpacking librole-tiny-perl (2.002004-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../072-libsub-quote-perl_2.006008-1_all.deb ... Unpacking libsub-quote-perl (2.006008-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../073-libmoo-perl_2.005005-1_all.deb ... Unpacking libmoo-perl (2.005005-1) ... Selecting previously unselected package libencode-locale-perl. Preparing to unpack .../074-libencode-locale-perl_1.05-3_all.deb ... Unpacking libencode-locale-perl (1.05-3) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../075-libtimedate-perl_2.3300-2_all.deb ... Unpacking libtimedate-perl (2.3300-2) ... Selecting previously unselected package libhttp-date-perl. Preparing to unpack .../076-libhttp-date-perl_6.06-1_all.deb ... Unpacking libhttp-date-perl (6.06-1) ... Selecting previously unselected package libfile-listing-perl. Preparing to unpack .../077-libfile-listing-perl_6.16-1_all.deb ... Unpacking libfile-listing-perl (6.16-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../078-libhtml-tagset-perl_3.24-1_all.deb ... Unpacking libhtml-tagset-perl (3.24-1) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../079-liburi-perl_5.28-1_all.deb ... Unpacking liburi-perl (5.28-1) ... Selecting previously unselected package libhtml-parser-perl:armhf. Preparing to unpack .../080-libhtml-parser-perl_3.82-1_armhf.deb ... Unpacking libhtml-parser-perl:armhf (3.82-1) ... Selecting previously unselected package libhtml-tree-perl. Preparing to unpack .../081-libhtml-tree-perl_5.07-3_all.deb ... Unpacking libhtml-tree-perl (5.07-3) ... Selecting previously unselected package libclone-perl:armhf. Preparing to unpack .../082-libclone-perl_0.46-1+b2_armhf.deb ... Unpacking libclone-perl:armhf (0.46-1+b2) ... Selecting previously unselected package libio-html-perl. Preparing to unpack .../083-libio-html-perl_1.004-3_all.deb ... Unpacking libio-html-perl (1.004-3) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../084-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../085-libhttp-message-perl_6.46-1_all.deb ... Unpacking libhttp-message-perl (6.46-1) ... Selecting previously unselected package libhttp-cookies-perl. Preparing to unpack .../086-libhttp-cookies-perl_6.11-1_all.deb ... Unpacking libhttp-cookies-perl (6.11-1) ... Selecting previously unselected package libhttp-negotiate-perl. Preparing to unpack .../087-libhttp-negotiate-perl_6.01-2_all.deb ... Unpacking libhttp-negotiate-perl (6.01-2) ... Selecting previously unselected package perl-openssl-defaults:armhf. Preparing to unpack .../088-perl-openssl-defaults_7+b2_armhf.deb ... Unpacking perl-openssl-defaults:armhf (7+b2) ... Selecting previously unselected package libnet-ssleay-perl:armhf. Preparing to unpack .../089-libnet-ssleay-perl_1.94-1+b1_armhf.deb ... Unpacking libnet-ssleay-perl:armhf (1.94-1+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../090-libio-socket-ssl-perl_2.088-1_all.deb ... Unpacking libio-socket-ssl-perl (2.088-1) ... Selecting previously unselected package libnet-http-perl. Preparing to unpack .../091-libnet-http-perl_6.23-1_all.deb ... Unpacking libnet-http-perl (6.23-1) ... Selecting previously unselected package liblwp-protocol-https-perl. Preparing to unpack .../092-liblwp-protocol-https-perl_6.14-1_all.deb ... Unpacking liblwp-protocol-https-perl (6.14-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../093-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libwww-robotrules-perl. Preparing to unpack .../094-libwww-robotrules-perl_6.02-1_all.deb ... Unpacking libwww-robotrules-perl (6.02-1) ... Selecting previously unselected package libwww-perl. Preparing to unpack .../095-libwww-perl_6.77-1_all.deb ... Unpacking libwww-perl (6.77-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../096-patchutils_0.4.2-1_armhf.deb ... Unpacking patchutils (0.4.2-1) ... Selecting previously unselected package wdiff. Preparing to unpack .../097-wdiff_1.2.2-6_armhf.deb ... Unpacking wdiff (1.2.2-6) ... Selecting previously unselected package devscripts. Preparing to unpack .../098-devscripts_2.23.7_all.deb ... Unpacking devscripts (2.23.7) ... Selecting previously unselected package fastjar. Preparing to unpack .../099-fastjar_2%3a0.98-7_armhf.deb ... Unpacking fastjar (2:0.98-7) ... Selecting previously unselected package help2man. Preparing to unpack .../100-help2man_1.49.3_armhf.deb ... Unpacking help2man (1.49.3) ... Selecting previously unselected package jarwrapper. Preparing to unpack .../101-jarwrapper_0.80_all.deb ... Unpacking jarwrapper (0.80) ... Selecting previously unselected package javahelper. Preparing to unpack .../102-javahelper_0.80_all.deb ... Unpacking javahelper (0.80) ... Selecting previously unselected package libsimde-dev. Preparing to unpack .../103-libsimde-dev_0.8.2-1_all.deb ... Unpacking libsimde-dev (0.8.2-1) ... Selecting previously unselected package maven-repo-helper. Preparing to unpack .../104-maven-repo-helper_1.11_all.deb ... Unpacking maven-repo-helper (1.11) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../105-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1) ... Setting up libksba8:armhf (1.6.7-2) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:armhf (1.5.7-2) ... Setting up fastjar (2:0.98-7) ... Setting up libsimde-dev (0.8.2-1) ... Setting up liblcms2-2:armhf (2.14-2+b1) ... Setting up wdiff (1.2.2-6) ... Setting up libfile-which-perl (1.27-2) ... Setting up libnpth0t64:armhf (1.6-3.1) ... Setting up libicu72:armhf (72.1-5) ... Setting up bsdextrautils (2.40.2-1) ... Setting up java-common (0.75) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up libio-pty-perl (1:1.20-1+b1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libclone-perl:armhf (0.46-1+b2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.16) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:armhf (7+b2) ... Setting up gettext-base (0.22.5-1) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.45-3) ... Setting up libassuan0:armhf (2.5.6-1+b1) ... Setting up libelf1t64:armhf (0.191-2) ... Setting up libsasl2-modules-db:armhf (2.1.28+dfsg1-6) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Jul 29 06:33:50 UTC 2024. Universal Time is now: Mon Jul 29 06:33:50 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libjpeg62-turbo:armhf (1:2.1.5-3) ... Setting up libnspr4:armhf (2:4.35-1.1+b1) ... Setting up gnupg-l10n (2.2.43-7) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.22.5-1) ... Setting up binfmt-support (2.2.2-7) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libb-hooks-op-check-perl:armhf (0.22-3+b1) ... Setting up libipc-run-perl (20231003.0-2) ... Setting up libpcsclite1:armhf (2.2.3-1) ... Setting up libsasl2-2:armhf (2.1.28+dfsg1-6) ... Setting up autoconf (2.71-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up netbase (6.4) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b3) ... Setting up libfile-dirlist-perl (0.05-3) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up openssl (3.2.2-1) ... Setting up readline-common (8.2-4) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Setting up liburi-perl (5.28-1) ... Setting up liblocale-gettext-perl (1.07-7) ... Setting up libfile-touch-perl (0.12-2) ... Setting up dctrl-tools (2.24-3) ... Setting up libnet-ssleay-perl:armhf (1.94-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up pinentry-curses (1.2.1-3+b2) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.22.5-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up jarwrapper (0.80) ... Setting up libtool (2.4.7-7) ... Setting up libnet-http-perl (6.23-1) ... Setting up libnss3:armhf (2:3.102-1) ... Setting up libdevel-callchecker-perl:armhf (0.009-1) ... Setting up libldap-2.5-0:armhf (2.5.18+dfsg-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up patchutils (0.4.2-1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libreadline8t64:armhf (8.2-4) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-5) ... Setting up libhtml-parser-perl:armhf (3.82-1) ... Setting up gpgconf (2.2.43-7) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libio-socket-ssl-perl (2.088-1) ... Setting up gpg (2.2.43-7) ... Setting up libhttp-message-perl (6.46-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up gpg-agent (2.2.43-7) ... Setting up libpython3.12-stdlib:armhf (3.12.4-3) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up python3.12 (3.12.4-3) ... Setting up libparams-classify-perl:armhf (0.015-2+b3) ... Setting up gpgsm (2.2.43-7) ... Setting up man-db (2.12.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dirmngr (2.2.43-7) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up openjdk-17-jre-headless:armhf (17.0.12+7-1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up gnupg (2.2.43-7) ... Setting up libpython3-stdlib:armhf (3.12.3-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up debhelper (13.16) ... Setting up python3 (3.12.3-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up devscripts (2.23.7) ... Setting up javahelper (0.80) ... Processing triggers for libc-bin (2.39-6) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up openjdk-17-jdk-headless:armhf (17.0.12+7-1) ... update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.17-75) ... Setting up maven-repo-helper (1.11) ... Setting up default-jdk-headless (2:1.17-75) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20240118) ... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libssw-1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libssw_1.1-15_source.changes dpkg-buildpackage: info: source package libssw dpkg-buildpackage: info: source version 1.1-15 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --with javahelper --with jh_maven_repo_helper debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/libssw-1.1' rm -f debian/libssw*install debian/libssw*links debian/ssw-align.1 dh_auto_clean --sourcedirectory src cd src && make -j3 clean make[2]: Entering directory '/build/reproducible-path/libssw-1.1/src' rm -f ssw.o ssw_cpp.o ssw-align libssw.so.0 example_c example_cpp libsswjni.so *.jar ssw/Aligner.class ssw/Alignment.class *~ libssw.a make[2]: Leaving directory '/build/reproducible-path/libssw-1.1/src' make[1]: Leaving directory '/build/reproducible-path/libssw-1.1' jh_clean dh_clean debian/rules binary dh binary --with javahelper --with jh_maven_repo_helper dh_update_autotools_config dh_autoreconf jh_linkjars debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/libssw-1.1' dh_auto_build --sourcedirectory src -- default java cd src && make -j3 "INSTALL=install --strip-program=true" default java make[2]: Entering directory '/build/reproducible-path/libssw-1.1/src' g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libssw-1.1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fPIC -shared -rdynamic -Wl,-soname,libssw.so.0 -o libssw.so.0 ssw.c ssw.h ssw_cpp.h ssw_cpp.cpp -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now cc -c -o ssw.o ssw.c -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libssw-1.1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 g++ -c -o ssw_cpp.o ssw_cpp.cpp -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/libssw-1.1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 javac ssw/Aligner.java javac ssw/Alignment.java cc -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libssw-1.1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I"/include" -I"/include/linux" -I/usr/lib/jvm/default-java/include/ -I/usr/lib/jvm/default-java/include/linux -fPIC -shared -rdynamic -o libsswjni.so sswjni.c ssw.c -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now ar rcs libssw.a ssw.o ssw_cpp.o cc -o example_c ssw.o example.c -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libssw-1.1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -lm -lz -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now g++ -o example_cpp example.cpp ssw.o ssw_cpp.o -g -O2 -ffile-prefix-map=/build/reproducible-path/libssw-1.1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -lm -lz -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now jar cvf ssw.jar ssw/Aligner.class ssw/Alignment.class added manifest adding: ssw/Aligner.class(in = 2486) (out= 1525)(deflated 38%) adding: ssw/Alignment.class(in = 1029) (out= 602)(deflated 41%) cc -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libssw-1.1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -o ssw-align main.c kseq.h -L. -lssw -lm -lz -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/libssw-1.1/src' make[1]: Leaving directory '/build/reproducible-path/libssw-1.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/libssw-1.1' LD_PRELOAD="$LD_PRELOAD /build/reproducible-path/libssw-1.1/src/libssw.so" src/ssw-align -c demo/ref.fa demo/1k.fa ERROR: ld.so: object '/build/reproducible-path/libssw-1.1/src/libssw.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. target_name: chr1 query_name: chr1 optimal_alignment_score: 2002 suboptimal_alignment_score: 1000 strand: + target_begin: 1 target_end: 1001 query_begin: 1 query_end: 1001 Target: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 Target: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 Target: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 Target: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 Target: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 Target: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 Target: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 Target: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 Target: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 Target: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 Target: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 Target: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 Target: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 Target: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 Target: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 Target: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Query: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 Target: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 ||||||||||||||||||||||||||||||||||||||||| Query: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 target_name: chr2 query_name: chr1 optimal_alignment_score: 312 suboptimal_alignment_score: 311 strand: + target_begin: 4437430 target_end: 4438470 query_begin: 9 query_end: 971 Target: 4437430 TTGAT-TCCACAGATTCCAATAGAATAGTTTGAAGATGGAACAATTGAGAATTCTGAATG 4437488 ||*|| *|||| || | |||| ||||*|**||| |**||*|*| ||**||| ||| Query: 9 TTAATCGCCAC-GA--C--ATAG--TAGTATTTAGA-GTTACTAGT---AAGCCTG-ATG 56 Target: 4437489 ---CTAAGCTAAT--TAGATATGTTTTCTTTGAAGGAAAACTACATTGTATTATTTTGCC 4437543 |||**| ||| |||*| | ||*||||| |||| | *|||||*|*|||**| Query: 57 CCACTACAC-AATTCTAGCT-T-TTCTCTTT--AGGA----T-GATTGTTTCATTCAG-- 104 Target: 4437544 TCCTCCCTCCTCCTAGAAGCCTT----TAAAATTCATGCATCATTTTAAAAGTTTTGAAA 4437599 ||*|**|| ||**|||||**|*| *|||||| || *|*||**||||| ||| || Query: 105 TCTTATCT-CTTTTAGAAAACATAGGAAAAAATT-AT--TTAATAATAAAA-TTT--AA- 156 Target: 4437600 TTTTTCAAGATTATGTTTAA-GTAT--ATTA-AATATTTTGTTCAGTCATCCCAATTAGT 4437655 ||**||| | ||| || |||| *||| ||*| *|||| |*||*||| || Query: 157 -TTGGCAA-A--ATG---AAGGTATGGCTTATAAGA--GTGTT------TTCCTATT-GT 200 Target: 4437656 TTTCAATG--G----CCCT-TTCCATTTAAAGAGTTTGGACATTCCATATAAAAAAG-AC 4437707 |||||*|| | |*|| ||| ||||*|**|*||||| *||| |**|****| |* Query: 201 TTTCAGTGTAGGACTCACTGTTC----TAAATAACTGGGACA-CCCA-AGGATTCTGTAA 254 Target: 4437708 AATGTCATCTACA-TTTTC-TTTGTTTT--CT---T---AATT-AT----ATCTTTTCCT 4437752 ||||*|||| || ||*|| |||*|*|| || | |||| || ||*|*|||*| Query: 255 AATGCCATC--CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCACATGTATTCAT 312 Target: 4437753 TTTTACAAATTTCTTAA-AAA-TAG-GTGTAAGATCTCTGATTTAACCTATGTGCGT--- 4437806 ||| |||||*|| ||| ||| *||| |||**|||| *||||**|*|| ||*| Query: 313 TTT------TTTCTAAACAAATTAGCATGT-AGAATTCTG-GTTAAAATTTG-GCATAGA 363 Target: 4437807 -C------TTAATTTTTCA----GCTTC---T--CTGTCATT---TTATT-AGATGTTTT 4437846 | *||*||||||| ||**| | |||||||| |*||| ||| Query: 364 ACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGA------ 417 Target: 4437847 TATTGT-TTTTAA------TTACTAAATTAATCTTAATCTATG-CTTATTATATCATTCT 4437898 ||*|| *||||| *||*||||*|*|| **||*|*||| |**|**|*|||**||| Query: 418 -ATGGTGATTTAACAAAGGATAATAAAGTTAT-GAAACCAATGCCACAAAACATCTGTCT 475 Target: 4437899 CCATTAC--GT-TATGGATACAACAACT-TG-GTGAATGTTTCTG----AGATTAACACT 4437949 | |*|| || |*||**| *| || |||**|||*|*|| |||***|*|** Query: 476 C--TAACTGGTGTGTGTGT-------GTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGA 526 Target: 4437950 AAAAATATTTAACAATCTCTCTCATTTTTATC----TTTTC-TTTCTTTTTCTCTTTGTC 4438004 *|*||*|||| ||*||*||| |||***|*|| |*||| |||||||||| |||| *| Query: 527 GAGAAAATTT--CACTCCCTC-CATAAATCTCACAGTATTCTTTTCTTTTTC-CTTT-CC 581 Target: 4438005 TTT-CTCACTCTCTATTTATCCTGTTACATCTTTGCTTCTATCTCTTTCTCTGTTTTTTT 4438063 ||| ||**|||| |*|||*| ||**|| |||||| || ||||| *|||**|| Query: 582 TTTCCTTGCTCT-TCTTTCT-CTCCTA-----TTGCTT---TC-CTTTC---ATTTCCTT 627 Target: 4438064 TTTTTAATATTTAAATAATGCTTCTGTCTGAGGAGGTTAAGAAGTGAAAGAAGACATTGT 4438123 *|**|||*|***|||||| |**|*| || || || | ||*||*|*|| Query: 628 CTCATAAAAGAAAAATAA-----CAATAT-AG------AA-AA-T--AACAAAATAT--- 668 Target: 4438124 GAGATGGAGAATCTTTATTAAGATAGAAG---AC--AAAGAGGGGATGAT-----GTGGA 4438173 ||||||**||*|||| ||||*|| *||| || ||| |*|**||*|| |||| Query: 669 -AGATGGTCAACCTTT-TTAATAT-TAAGGTTACCTAAA-ATGCCATTATCCAAAGTGG- 723 Target: 4438174 CACTT-TC-AG-GATG-TGGAATGGT---TACATACATTATT---CTGT-TA-TCACAAG 4438221 || || || |||| || || || |||*|||| |||| |*|| || ||| || Query: 724 ---TTCTCTAGAGATGCTG--AT-GTATATACTTACA-TATTTTACAGTGTATTCA-AA- 774 Target: 4438222 GTTAGCTAA-ACTCTCTTTCATAA-A-ATCTCTCTTGTTTCTTACTCCCTAAATCTCAAA 4438278 || || |*|*|*||*||||| | ||*|| || |||*|*|| | || || Query: 775 --TA---AAGAGTATATTACATAAGACATATC-CT--TTTGTAAC-C---AA--CT---- 816 Target: 4438279 TAAGTGACTAAAAAATGCCTGGA--TGACCCCAAACAGTAAGAATAGCTTGTA-GGTCTC 4438335 |**||*|*|||*||*|**||||| ||*|**||||| *|| ||| | |||| *||||* Query: 817 TTTGTCATTAACAATTTACTGGACTTGTCAACAAAC-CTA--AAT--C-TGTATCGTCTA 870 Target: 4438336 TGAAG---ATGTTATCTTTTGCCCTGGGAAGGTGGATTCCTATACTAACACCTGCACTTG 4438392 |*|*| |*|| ||*||| |||*| ||*|| || ||*|*||*||| || Query: 871 TAATGGCTACGT--TCATTT----TGGTA---TGAAT--CT-TAATTACCCCT----TT- 913 Target: 4438393 AAAAGGTGAACAAGATAATTTTGTATTTATTTTCTCACTA--CCACTGCAGGTAGCATGG 4438450 *|| | ||*||| ||*|*||||||||| || *|||| | *|| *||| Query: 914 -----CTG--C---ATTATT---TAATGATTTTCTCA-TATGTCACT-C--TTA-AATG- 954 Target: 4438451 GACACTTCTTTATTATTCAC 4438470 *||||| |*|||*||||| Query: 955 --TACTTC-TAATTTTTCAC 971 target_name: chr3 query_name: chr1 optimal_alignment_score: 291 suboptimal_alignment_score: 289 strand: + target_begin: 680970 target_end: 682002 query_begin: 9 query_end: 998 Target: 680970 TTAAATTGTCA--ACATGGTA-TATATGAAATGAATTGGGTTTATAATAGTAAACCAATC 681026 || |||*|*|| ||||*||| ||| |*| || || ||*||||||*|| |* Query: 9 TT-AATCGCCACGACATAGTAGTAT-TTA---GA-----GT---TACTAGTAAGCC--TG 53 Target: 681027 TTG-CATTCCTAAAA---TA--AATCCTATTTAG--TTATCGT--------GTGTTATTT 681070 *|| ||*|*| |*|| || **|*||*||||| |*||*|| ||*||| |* Query: 54 ATGCCACTAC-ACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTA-TC 111 Target: 681071 TCTT----AATACAGTGTTGGATTAAGTTTGCTATTTTTTATTTTAAAATTTTACATTAT 681126 |||| ||*||| |*|||**||*| || |||*||**||||| |||| || Query: 112 TCTTTTAGAAAACA---TAGGAAAAAAT----TA--TTTAATAATAAAA-TTTA----AT 157 Target: 681127 TTTCTTCAGTGA---TATTGACCTGT---AGTTTTCTTTCATTATACTGTTTTATCAGAT 681180 |**| **|*||| || ||*|*|*| |||*| |||| *||| ||||| |||| | Query: 158 TGGC-AAAATGAAGGTA-TGGCTTATAAGAGTGT--TTTC-CTAT--TGTTT--TCAG-T 207 Target: 681181 TTAGGTATCAGTGTTAT-AGTTTCT---TCATGAAAGGAAT---TAAGATGTTTTCCTTC 681233 *||||**|||*||||*| |*|**|| *||***|||||*| |||*||| ||*|| Query: 208 GTAGGACTCACTGTTCTAAATAACTGGGACACCCAAGGATTCTGTAAAATG----CCATC 263 Target: 681234 C-CTT-TCA---ATGTT------CTGAATAATCATACAGCAT-TA-TGACTATCTGCCAT 681280 | *|| ||| ||*|| ||*||*|*||||*|| ||| || |*|*|*|*| | Query: 264 CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCA-CATGTATTCATTTTTT----T 318 Target: 681281 TTAAATC--TTTAGAAT----AATTACCTTGTGAAACTATGTGGGCTTGGTGCTATTTTG 681334 *|||| | *||||*|| |||| ||*||*||| || |*|||*|*|**| | ***| Query: 319 CTAAA-CAAATTAGCATGTAGAATT--CTGGTTAAA--AT-TTGGCATAGAAC-A-CCCG 370 Target: 681335 TGTAGTATTTATC-TAATTGTTTCCTATA--TTTC-TT--CTA--TGAAATTGGTTGATT 681386 *||| | |||*|| ||| ||***||*||| |*|| || ||| |||*|*||| ||||| Query: 371 GGTA-T-TTTTTCATAA-TGCACCCAATAACTGTCATTCACTAATTGAGAATGG-TGATT 426 Target: 681387 TAATCTTTCTAACACTAATAAGATTAATTTGAGTAAACTTCATTTCTCTAGAAAATAATT 681446 ||| |*||***||||||**||| || |||| ||*|*| | |*||||*| | Query: 427 TAA-----CAAAGGATAATAAAGTTA---TG---AAAC--CAATGC-C-ACAAAACA--T 469 Target: 681447 AATTCATCAAATTAAATCAAATTTGAAATTTGATTTCAAATTTATTTGTGTCAAAGTAA- 681505 ***|| || |||*|****|*|| |*|| |*| *|*|*|*|||||****|||| Query: 470 CTGTC-TC----TAACTGGTGTGTG---TGTG-TGT---GTGTGTGTGTGTGTGTGTAAG 517 Target: 681506 A-GGAG-G--------TTTC-CT--GT-CATTTTAAAATTCTC----TGTTGTTTTAATA 681547 | |||| | |||| || *| || |||| |||| |*||*|||| *|* Query: 518 AGGGAGAGAGAGAAAATTTCACTCCCTCCA---TAAA--TCTCACAGTATTCTTTT-CTT 571 Target: 681548 GTAACTT--GTTT-CTTATTATTTATAACTTTAT---ATATT--TGTACTT---TTTCCT 681596 *|**||| *||| |||**|*|| ||||*| *|||| |*|*||| ||||| Query: 572 TTTCCTTTCCTTTCCTTGCTCTT-----CTTTCTCTCCTATTGCTTTCCTTTCATTTCC- 625 Target: 681597 TTTTTATCAAATG--AACT--GAGTTT------TAAC-----ATCGCAT--TTAA---TT 681636 ||*|*|| |||*| ||*| *|*|*| |||| ||*| || |*|| || Query: 626 TTCTCAT-AAAAGAAAAATAACAATATAGAAAATAACAAAATATAG-ATGGTCAACCTTT 683 Target: 681637 TTAATTATCTAATCTAAATCTAAAAGCTGATATTTGATTCAA-----TTGTC-AGAAATC 681690 |||| ||| |||**| *|*|||||| ||**||| ||*||| ||*|| |||*|| Query: 684 TTAA-TAT-TAAGGT-TACCTAAAA--TGCCATT--ATCCAAAGTGGTTCTCTAGAGAT- 735 Target: 681691 TCTTAAGTATATTGGGATCAACTTGGAAAAGTAAATTGACTTTAAACAGTACACTT--TA 681748 *||*|*|||||| |||| |*| | ||| || |||||**| || *| Query: 736 GCTGATGTATAT--------ACTT--ACA--T--ATT---TT---ACAGTGTA-TTCAAA 774 Target: 681749 TGAACTTTAAATTACAGATCAGATAT--TTTTAGTAA--AA-TTTTATCCAAACTAAGAT 681803 |*||***||*||||||*|**|*|||| |||| |||| || ||||*|| |*||| Query: 775 TAAAGAGTATATTACATAAGACATATCCTTTT-GTAACCAACTTTTGTC---ATTAA--- 827 Target: 681804 GCAATATGAGTATAATCACTGATTCAA-AAAGCTTCCTTTAGTGAGCATGAAATATC-TC 681861 |||| |*|*|**|*| || |||| ||| || || *|*| || |||| | Query: 828 -CAAT-TTACTGGACT---TG--TCAACAAA----CC--TA--AATC-TG---TATCGT- 867 Target: 681862 ACTATTTTAAT---T---TTAATATTGATTGTGTGTTAAAATAATAATAATTGCATTAT- 681914 ||| |||| | ||*||*||| ||*|| |||**||||*|***|*||*| Query: 868 -CTA---TAATGGCTACGTTCATTTTG---GTATG----AATCTTAATTACCCCTTTCTG 916 Target: 681915 -ATTATTGATAATGTGTATTCTTGTCATGTTTCCATTCTTACTGGAAATG--CCTCCAGT 681971 |||||| ||||| ||| ||*||||*|*| ||*|||| ||||| |*||*|*| Query: 917 CATTATT--TAATG---ATT-TTCTCATATGT-CACTCTT-----AAATGTACTTCTAAT 964 Target: 681972 GTTTC----TCCATCAAATAGTAT-ACTGGCTCTAA 682002 *|||| |*|||||*||| || |*|||*||*|| Query: 965 TTTTCACTTTACATCACATA--ATGAATGGATCCAA 998 target_name: chr4 query_name: chr1 optimal_alignment_score: 280 suboptimal_alignment_score: 273 strand: + target_begin: 47000 target_end: 48059 query_begin: 2 query_end: 1001 Target: 47000 AAACATCTT-ATAGCTACTGGATTCTTTTTTGCCTATGTATTTA----TA-TATGT--G- 47050 |||||**|| ||*||*|| || | *|*| || ||||||| || || || | Query: 2 AAACAGGTTAATCGCCAC--GA--C---ATAG--TA-GTATTTAGAGTTACTA-GTAAGC 50 Target: 47051 CTGTAT----CTATGTAATGTCTA--TTTTTATAAAGCTCTAATTGACCTAGAGGAAAAT 47104 ||| || |||***||| |||| |||| |||| || ||| || Query: 51 CTG-ATGCCACTACACAAT-TCTAGCTTTT-------CTCT--TT-------AGG---AT 89 Target: 47105 GA--GTTT--TTGAATCAAATAT-TTTTTGAAGGGAAAGTAAAAACTGTGGTACATTGAA 47159 || |||| ||*|*||**||*| ||||*|||***|*||*||||| ||| | Query: 90 GATTGTTTCATTCAGTCTTATCTCTTTTAGAAAACATAGGAAAAA---------ATT-A- 138 Target: 47160 GTTCACATGACTAATCATTGAGAAATAAAAACAGACTTAGCAATTATTGGTAAAAAGCAG 47219 || |||| ||||||| || |*|||||*||||*|*|| Query: 139 -TT--------TAAT--------AATAAAA------TT-----TAATTGGCAAAATGAAG 170 Target: 47220 --ATG--TTAAAA-----TATAC--ATTTTTGTTCAGGGTTAAAGGA-T---TGTTCTGA 47264 ||| |||*|| |*|*| |||*|| |||||*|| |||| | ||||||*| Query: 171 GTATGGCTTATAAGAGTGTTTTCCTATTGTT-TTCAGTGT---AGGACTCACTGTTCTAA 226 Target: 47265 ATTA----GATA---A--GATAAAGCTAAAAGTTTAAACAAGTTATAA---AAAGTTTCT 47312 ||*| ||*| | |||***| ||||| |***|*|*||||||*| |*|*|**|| Query: 227 ATAACTGGGACACCCAAGGATTCTG-TAAAA-TGCCATCCAGTTATCATTTATATTCCCT 284 Target: 47313 A--T-AAAATTCATCTTGCCA-AAGAA---ATTTTGTCCATGAACATTAAATTACGAAAG 47365 | | ||||||||| | || |*|*| |||||*|*| |*||| |||||| |*|*| Query: 285 AACTCAAAATTCAT-T---CACATGTATTCATTTTTTTC-TAAAC---AAATTA-GCATG 335 Target: 47366 GTATTATATGTTTTTTTGGT--AAATTAAGCATTTAAATAATAGCACAACAAGGTA---- 47419 ||*| *||*|||| |||||**|| ||||*|||*|**|||| Query: 336 ----TAGA----ATTCTGGTTAAAATTTGGC---------ATAGAACACCCGGGTATTTT 378 Target: 47420 CTCTTAAGGCAC----TAATCTGCTCTTTAGCAAAATTTGTAAA--GTG--TTATAAACG 47471 *||*|||*|||| ||| ||| ||*|| ||**|*|||**|| ||| |||**||*| Query: 379 TTCATAATGCACCCAATAA-CTG-TCATT--CACTAATTGAGAATGGTGATTTAACAAAG 434 Target: 47472 GGTTTTACTTTTGTAAATTTTTTGAAACAATTGTGGCAAAA------TAAATAACATGGT 47525 | | |**|||| *||*||||||*|*||***||||| |***|||| |||| Query: 435 G-----A---TAATAAA-GTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC-TGGT 484 Target: 47526 AATCTG-GAAT-TCTATTTCATAACATCAAGTGT-TTTAA-------ACCTCTAACATTT 47575 *|*|| |**| |*|*|*| *| *| |||| |*||| |*****||*|||| Query: 485 -GTGTGTGTGTGTGTGTGT-GT---GT---GTGTGTGTAAGAGGGAGAGAGAGAAAATTT 536 Target: 47576 C-TTC---CCA-AAATCAAAC----TTCAGTTTCAAAATTGT--CTTTCCT---CGTGC- 47620 | *|| ||| |||||**|| ||| *|||| ||*| ||||||| |*||| Query: 537 CACTCCCTCCATAAATCTCACAGTATTC-TTTTC----TTTTTCCTTTCCTTTCCTTGCT 591 Target: 47621 CTGACTTT-TGAATGCTACAGAGGGC---CCCTGGAGTATCC-------AAAAGAGAGGT 47669 || *|||| | || |**|**|| ||*|**| |*||| ||||||*|**| Query: 592 CT-TCTTTCT-----CT-CCTATTGCTTTCCTTTCA-TTTCCTTCTCATAAAAGAAAAAT 643 Target: 47670 AAACTGGATTATTTGACATATTTAGTTACATGGGATTGCCAATCTTCTTTAGGTTATAT- 47728 ||| |*|||***|*|||***|**||*| |||*|*|||*||| |||| |||| Query: 644 -AAC---AATATAGAAAATAACAAAATATA---GATGGTCAACCTT-TTTA----ATATT 691 Target: 47729 -AGGTTA--TATTTTG--AT-----AAA-T-ATTCTATAGGTTATATTTTGATAAATGAT 47776 |||||| ||***|| || ||| | *||||*||| |*||**||||**|| || Query: 692 AAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTCTAG---AGATGCTGATGTAT-AT 747 Target: 47777 ACTAATATATGTTCCAAAATTGTATGAGATTTCTAATGTCTGAGTATATGCTATCAAAAT 47836 |||*|*||||*|| |*|*|||| |||*||| ***|||||||| || || Query: 748 ACTTACATATTTT---ACAGTGTA------TTCAAAT-AAAGAGTATAT--TA-CA---- 790 Target: 47837 TAAG--GTTT--TTATGT---TAAGTTATTGT-A--AAC----CACAGAGA-TT---ATC 47878 |||| *|*| ||*||| *||*|| |||| | ||| *||*| || || |*| Query: 791 TAAGACATATCCTTTTGTAACCAACTT-TTGTCATTAACAATTTACTG-GACTTGTCAAC 848 Target: 47879 AAACTTCTTTGTCAACTGTGTTTCTGACTATAA---CTACCCTGGACATTTTGTTATTCA 47935 |||| || ||*|*|||*|| |*|||||| |||| |**|||||||*||| Query: 849 AAAC--CT-----AAATCTGTATC-GTCTATAATGGCTAC---GTTCATTTTGGTAT--- 894 Target: 47936 AAGACAATTGTCTTGTTTAGATCCTTTTCAAGAGATAGTTTATAAGA--AGCTACAGAAC 47993 || | ||||**|| |*||*|||| *| *||**|||| |*|| **|| ||*| Query: 895 --GA-A----TCTTAATT--ACCCCTTTC-TG-CATTATTTA-ATGATTTTCT-CATA-- 939 Target: 47994 TGTGACAGGTGCTCTCAAATGCAGTTTTCCAA---ATAACTTTGGAGATCATGACAT--T 48048 ||| || ||||*|||||*| *|||*|| *|*||||| | |||*|||| | Query: 940 TGT--CA----CTCTTAAATGTA--CTTCTAATTTTTCACTTT--A---CATCACATAAT 986 Target: 48049 GAA---AT--AAAGTA 48059 ||| || ||| || Query: 987 GAATGGATCCAAA-TA 1001 target_name: chr5 query_name: chr1 optimal_alignment_score: 230 suboptimal_alignment_score: 199 strand: + target_begin: 8806 target_end: 9723 query_begin: 11 query_end: 974 Target: 8806 AATGGCCAGGGCACTGAGGAG-CTGTGGAAGAACTGGGGAAATCACCGAAACCCAGTAC- 8863 |||*||||*|*|| | ||*|| *|*|*||***||| *|*||*| |*| |**|||*||| Query: 11 AATCGCCACGACA-T-AGTAGTATTTAGAGTTACT--AGTAAGC-CTG-ATGCCACTACA 64 Target: 8864 CATTTCAGTGAGGCCATTCTC--CA--AAAACTCTCTC---CA-TCTTATTTCTT---G- 8911 ||*||| | | ||**||||| *| |**|*|*|*|| || ||||||*|||| | Query: 65 CAATTC--T-A-GCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 Target: 8912 ------GGGAAAGAGTTCTTCTACT--TACAATATGAT---CAACCTGA--TTAAG---A 8955 *|||||*|*||*|| ||*| ||*|||*|*|| |||**||| *||*| * Query: 121 AAACATAGGAAAAAATTATT-TAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTT 179 Target: 8956 AT-ATATTGGTTT-CTATAACTGTGATGCAGATTATAACTATACAAATGCCAATTACCAG 9013 || |*|*||*||| |||| ||| *|*|||**||**||| | |*|| || |*|* Query: 180 ATAAGAGTGTTTTCCTAT---TGT-TTTCAGTGTAGGACT---C-ACTG----TT-CTAA 226 Target: 9014 A-AGCTAAGCCACCC--TGATTC--CAAAAT---AT--AGTCTCACATTTCATGGTTTCC 9063 | |*||**|*||||| *||||| *||||| || ||| |**||||| || *|||| Query: 227 ATAACTGGGACACCCAAGGATTCTGTAAAATGCCATCCAGT-TATCATTT-AT--ATTCC 282 Target: 9064 TGGTA--TCAGAAATCCCTATGAGCCTG-A--GATTTTTTCCCTTAA-------AGCA-- 9109 *|| ||| ||||*|*| |*| |*|| | *|||||||*| ||| |||| Query: 283 --CTAACTCA-AAATTCAT-TCA-CATGTATTCATTTTTTTC--TAAACAAATTAGCATG 335 Target: 9110 ---AATACTG---AAGAT-----A-AGAA-ACC----AATTAATTTCATTGTTGC----- 9147 |||*||| ||*|| | |||| ||| *||| *||||| |**||| Query: 336 TAGAATTCTGGTTAAAATTTGGCATAGAACACCCGGGTATT-TTTTCA-TAATGCACCCA 393 Target: 9148 -TATCTTGT-AT---CCAATGGCATAA----AATCTATACTAACTTGATTAGAAA-TTCT 9197 ||*| ||| || |*|||*| |*|| *||*|| ||*|| *|||*|*||| ||*| Query: 394 ATAAC-TGTCATTCACTAATTG-AGAATGGTGATTTA-ACAAA--GGATAATAAAGTTAT 448 Target: 9198 G---CCAATG------AACAACT-T---TA--T--TGT-TTTGAGTGATG---------- 9229 | |||||| ||||*|| | || | ||| |*||*||| || Query: 449 GAAACCAATGCCACAAAACATCTGTCTCTAACTGGTGTGTGTGTGTG-TGTGTGTGTGTG 507 Target: 9230 -------AAGCCCCATTTGAGA-ATATAGGCTCAATGGCCTTGC-----TCT-----TA- 9270 |||****| |||| |*|*|***|||*| ||*|*| ||| || Query: 508 TGTGTGTAAGAGGGA---GAGAGAGAAAATTTCACT--CCCTCCATAAATCTCACAGTAT 562 Target: 9271 ACTGTTCTCTATGCAGTCACTTTCTTCTGCACTAAAGTGCCAATACAGATACTG-AATAC 9329 *||*||||*|*|*|**|| |||||*| |||*|| **|**|**|*| ||*|| **|*| Query: 563 TCTTTTCTTTTTCCTTTC-CTTTCCT-TGCTCT--TCTTTCTCTCC---TATTGCTTTCC 615 Target: 9330 ATTGATTTAAAT-ACATAGATATATAAATA--GATAT-TTAAATATGC--AATATATATG 9383 *||*||||***| *|||| |*|*|*||||| *|||| **||||| *| ||||||*||| Query: 616 TTTCATTTCCTTCTCATA-AAAGAAAAATAACAATATAGAAAATA-ACAAAATATAGATG 673 Target: 9384 G--ATAC---TTTATATATT--GATT---TAAA----CATTTTCC--------TCTCATA 9421 | | || |||| ||||| |*|| |||| ||||*||| |||| || Query: 674 GTCA-ACCTTTTTA-ATATTAAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTC-TA 730 Target: 9422 GA-----TGA--AAAATCACTCTAACATGTATTGATGGCTTCACA-AGAAATCATTTACA 9473 || ||| *|*|| ||| | ||| |||| || ||| *|*|*|||**||*| Query: 731 GAGATGCTGATGTATAT-ACT-T-ACA--TATT------TT-ACAGTGTATTCAAATAAA 778 Target: 9474 GAAAATAATTGCATATGATACAGT--GTTTGTGCCAAAATGTATTCATGGCTTTAAAAAC 9531 ||**|| |||*||||*||*|*| | *|||||**|*||*| CPU time: 583.207764 seconds || ||*|*||||*|| Query: 779 GAGTAT-ATTACATAAGACATA-TCCTTTTGTAACCAACT---TT--TGTCATTAACAA- 830 Target: 9532 TTCAGTGGAAATGTCTATTCAGATCCCTAGCCCATTGTTAAATTGGTTTCTGTTTTCTTG 9591 ||*|*||||**||||*| || |*|| |||||**||*|| | ||| Query: 831 TTTACTGGACTTGTCAA--CA-AACC------------TAAATCTGTATC-G---TCT-- 869 Target: 9592 CTAAGTTTGAGCTGC-TTATAGATGATGGATATTGACCCCTTATAGATGTTGGATATTGA 9650 *||| || |||*| || *||**||| || ||| ||*|| | ||| | Query: 870 ATAA---TG-GCTACGTT---CATTTTGG-TA-TGA----------ATCTT--A-ATT-A 906 Target: 9651 CCCC-TTGTGGATGTATGGCCGGTGCTTTTCCCAGTATTTAGGTCATCTCTGCA---CAC 9706 |||| ||*||*|| ||| ****||*|||||*|| ||| |||| ||||**| *|| Query: 907 CCCCTTTCTGCAT-TAT--TTAATGATTTTCTCA-TAT----GTCA-CTCTTAAATGTAC 957 Target: 9707 TGTTGATTGTTTC-CTTT 9723 |**|*||| |||| |||| Query: 958 TTCTAATT-TTTCACTTT 974 make[1]: Leaving directory '/build/reproducible-path/libssw-1.1' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/libssw-1.1' sed 's/@DEB_HOST_MULTIARCH@/arm-linux-gnueabihf/g' debian/libssw0.install.in > debian/libssw0.install sed 's/@DEB_HOST_MULTIARCH@/arm-linux-gnueabihf/g' debian/libssw-dev.install.in > debian/libssw-dev.install sed -e 's/@DEB_HOST_MULTIARCH@/arm-linux-gnueabihf/g' \ -e 's/@DEB_JAVA_PKG_VERSION@/1.1/g' debian/libssw-dev.links.in > debian/libssw-dev.links sed 's/@DEB_HOST_MULTIARCH@/arm-linux-gnueabihf/g' debian/libssw-java.install.in > debian/libssw-java.install sed -e 's/@DEB_HOST_MULTIARCH@/arm-linux-gnueabihf/g' \ -e 's/@DEB_JAVA_PKG_VERSION@/1.1/g' debian/libssw-java.links.in > debian/libssw-java.links mv src/ssw.jar src/ssw-1.1.jar dh_auto_install make[1]: Leaving directory '/build/reproducible-path/libssw-1.1' dh_install jh_installjavadoc dh_installdocs dh_installchangelogs debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/libssw-1.1' LD_LIBRARY_PATH=`pwd`/src help2man --version-string=' ' --help-option=' ' \ -I debian/extra-man-info.txt \ -N -n 'fast Smith-Waterman aligner' \ --no-discard-stderr src/ssw-align \ | fgrep -v ERROR > debian/ssw-align.1 dh_installman make[1]: Leaving directory '/build/reproducible-path/libssw-1.1' dh_perl dh_link jh_installlibs jh_classpath jh_manifest jh_exec jh_depends mh_installpoms mh_linkjars --skip-clean-poms dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dpkg-gensymbols: warning: debian/libssw0/DEBIAN/symbols doesn't match completely debian/libssw0.symbols --- debian/libssw0.symbols (libssw0_1.1-15_armhf) +++ dpkg-gensymbolsmu4Qgd 2024-07-28 18:45:24.665567144 -1200 @@ -21,7 +21,7 @@ _ZNK20StripedSmithWaterman7Aligner13TranslateBaseEPKcRKiPa@Base 1.1 _ZNK20StripedSmithWaterman7Aligner5AlignEPKcRKNS_6FilterEPNS_9AlignmentE@Base 1.1 _ZNK20StripedSmithWaterman7Aligner5AlignEPKcS2_RKiRKNS_6FilterEPNS_9AlignmentE@Base 1.1 - (optional)_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base 1.1 +#MISSING: 1.1-15# (optional)_ZNSt6vectorIjSaIjEE17_M_realloc_insertIJRKjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_@Base 1.1 align_destroy@Base 1.1 init_destroy@Base 1.1 mark_mismatch@Base 1.1 dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libssw0' in '../libssw0_1.1-15_armhf.deb'. dpkg-deb: building package 'libssw-java' in '../libssw-java_1.1-15_armhf.deb'. dpkg-deb: building package 'ssw-align-dbgsym' in '../ssw-align-dbgsym_1.1-15_armhf.deb'. dpkg-deb: building package 'libssw-java-dbgsym' in '../libssw-java-dbgsym_1.1-15_armhf.deb'. dpkg-deb: building package 'libssw0-dbgsym' in '../libssw0-dbgsym_1.1-15_armhf.deb'. dpkg-deb: building package 'ssw-align' in '../ssw-align_1.1-15_armhf.deb'. dpkg-deb: building package 'libssw-dev' in '../libssw-dev_1.1-15_armhf.deb'. dpkg-genbuildinfo --build=binary -O../libssw_1.1-15_armhf.buildinfo dpkg-genchanges --build=binary -O../libssw_1.1-15_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/16111 and its subdirectories I: Current time: Sun Jul 28 18:45:41 -12 2024 I: pbuilder-time-stamp: 1722235541 Mon Jul 29 06:45:49 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt64z-armhf-rb.debian.net. Mon Jul 29 06:45:49 UTC 2024 I: Preparing to do remote build '2' on virt64z-armhf-rb.debian.net. Mon Jul 29 06:52:14 UTC 2024 I: Deleting $TMPDIR on virt64z-armhf-rb.debian.net. Mon Jul 29 06:52:17 UTC 2024 I: libssw_1.1-15_armhf.changes: Format: 1.8 Date: Tue, 23 Jul 2024 20:36:29 +0200 Source: libssw Binary: libssw-dev libssw-java libssw-java-dbgsym libssw0 libssw0-dbgsym ssw-align ssw-align-dbgsym Architecture: armhf Version: 1.1-15 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: libssw-dev - Development headers and static libraries for libssw libssw-java - Java bindings for libssw libssw0 - fast SIMD parallelized implementation of the Smith-Waterman algor ssw-align - Smith-Waterman aligner based on libssw Closes: 1015525 1075207 Changes: libssw (1.1-15) unstable; urgency=medium . * Team upload. . [ Michael R. Crusoe ] * d/rules: append extra flag for ppc64el, don't override. . [ Étienne Mollier ] * d/libssw0.symbols: mark compiler leaked symbol as optional. (Closes: #1015525, #1075207) * d/rules: forcefully run LTO builds. * d/control: declare compliance to standards version 4.7.0. Checksums-Sha1: 1507853bffb2dc7a4513465c42b80a3fb9b9bce2 24268 libssw-dev_1.1-15_armhf.deb 79b42532b14b3a444727f6981fd5e9b8793612c2 50000 libssw-java-dbgsym_1.1-15_armhf.deb 7a4909515818b6c21c799dcac688e65e670635f4 19176 libssw-java_1.1-15_armhf.deb 5bdbd2d9c691e018efc79106772e4ad24fda28a0 105848 libssw0-dbgsym_1.1-15_armhf.deb 4facb981b9a562fda2dc59fd7919b4971d2eb774 20972 libssw0_1.1-15_armhf.deb 1a35beefa81a2da72a4126b4a4ced1cd0b31a86f 9479 libssw_1.1-15_armhf.buildinfo 5a3d80aa3cec70a1eb739f143987be4ff38aea8b 57980 ssw-align-dbgsym_1.1-15_armhf.deb 6b19774bb0020d14b6890a84c9d80376613c1683 22576 ssw-align_1.1-15_armhf.deb Checksums-Sha256: abfdb86633c04183cb49902b83a681598fd5581a9c7c8a57fb7cdda80c8db1b1 24268 libssw-dev_1.1-15_armhf.deb 23c7d46cbd2686a921853650c2ea3f07769e3eb129661deceabe2f1952c2549a 50000 libssw-java-dbgsym_1.1-15_armhf.deb 6e541d4c35be0b7d2615f9887f1250318a2621e1148ba86cbebab64c0163a1fc 19176 libssw-java_1.1-15_armhf.deb 9dbea09c98cc984c1f8f8f9c70f44f5b4ddf1f0ab400a6e6d233a06eef690c18 105848 libssw0-dbgsym_1.1-15_armhf.deb ae81564487cef6510884bae9e92a7bb93f0c01e2ccaf711dfa560341e839b756 20972 libssw0_1.1-15_armhf.deb 099cd56bcd66d341f1c5dada3cabcec8df1907a52890e492fc701c716bdc5c5d 9479 libssw_1.1-15_armhf.buildinfo efdad9bc2b9c28da25e3faf917a4cbdd195a030af6ad2f9c08a7a6561816b8a8 57980 ssw-align-dbgsym_1.1-15_armhf.deb a58dae8a3fbc66bc6ec5309188b126243b5f91eac78566c7185ec53dbe63b1d3 22576 ssw-align_1.1-15_armhf.deb Files: 0378663d46d179173cb077774a88df3f 24268 libdevel optional libssw-dev_1.1-15_armhf.deb bdd42378a36a80669c406cc12714ef4d 50000 debug optional libssw-java-dbgsym_1.1-15_armhf.deb 17963d053f90d0de8fe248aa3f37a1ec 19176 java optional libssw-java_1.1-15_armhf.deb b239f120f441148c8786bc90d09881d0 105848 debug optional libssw0-dbgsym_1.1-15_armhf.deb cd7ac0c93adb0ae87f5509bc60a1cb91 20972 libs optional libssw0_1.1-15_armhf.deb be6276ceb73c112296725867960ba814 9479 science optional libssw_1.1-15_armhf.buildinfo 2c14739110a331bcb757bf9a9e2029d9 57980 debug optional ssw-align-dbgsym_1.1-15_armhf.deb 6c16a81034133d9159fcc4c0f6c9ccd5 22576 science optional ssw-align_1.1-15_armhf.deb Mon Jul 29 06:52:18 UTC 2024 I: diffoscope 272 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_3-7877.service Warning: program compiled against libxml 212 using older 209 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.KQFfqLd0/libssw_1.1-15.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.KQFfqLd0/libssw_1.1-15.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.KQFfqLd0/libssw_1.1-15.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.KQFfqLd0/b1/libssw_1.1-15_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.KQFfqLd0/b2/libssw_1.1-15_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.380s) 0.379s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.024s) 0.024s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 710ms CPU time consumed: 710ms Mon Jul 29 06:52:19 UTC 2024 I: diffoscope 272 found no differences in the changes files, and a .buildinfo file also exists. Mon Jul 29 06:52:19 UTC 2024 I: libssw from trixie built successfully and reproducibly on armhf. Mon Jul 29 06:52:20 UTC 2024 I: Submitting .buildinfo files to external archives: Mon Jul 29 06:52:20 UTC 2024 I: Submitting 12K b1/libssw_1.1-15_armhf.buildinfo.asc Mon Jul 29 06:52:21 UTC 2024 I: Submitting 12K b2/libssw_1.1-15_armhf.buildinfo.asc Mon Jul 29 06:52:22 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Jul 29 06:52:22 UTC 2024 I: Done submitting .buildinfo files. Mon Jul 29 06:52:22 UTC 2024 I: Removing signed libssw_1.1-15_armhf.buildinfo.asc files: removed './b1/libssw_1.1-15_armhf.buildinfo.asc' removed './b2/libssw_1.1-15_armhf.buildinfo.asc'