Sun Mar 24 22:01:33 UTC 2024 I: starting to build fitgcp/trixie/armhf on jenkins on '2024-03-24 22:01' Sun Mar 24 22:01:33 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_23/886/console.log Sun Mar 24 22:01:33 UTC 2024 I: Downloading source for trixie/fitgcp=0.0.20150429-5 --2024-03-24 22:01:33-- http://deb.debian.org/debian/pool/main/f/fitgcp/fitgcp_0.0.20150429-5.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2068 (2.0K) [text/prs.lines.tag] Saving to: ‘fitgcp_0.0.20150429-5.dsc’ 0K .. 100% 260M=0s 2024-03-24 22:01:33 (260 MB/s) - ‘fitgcp_0.0.20150429-5.dsc’ saved [2068/2068] Sun Mar 24 22:01:33 UTC 2024 I: fitgcp_0.0.20150429-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: fitgcp Binary: fitgcp Architecture: all Version: 0.0.20150429-5 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: http://sourceforge.net/projects/fitgcp/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/fitgcp Vcs-Git: https://salsa.debian.org/med-team/fitgcp.git Testsuite: autopkgtest Testsuite-Triggers: python3-matplotlib Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-pysam Package-List: fitgcp deb science optional arch=all Checksums-Sha1: 6574f35714dc0e11ffd2965351b5a739f82c1a74 8368 fitgcp_0.0.20150429.orig.tar.xz 4c0e5b710e4277450f2c9610dc10f72a8d00f3a4 3670200 fitgcp_0.0.20150429-5.debian.tar.xz Checksums-Sha256: f18c9c2155dcf7eaf0bedd349d6accbe051110a6958478fcb58507cfa062390e 8368 fitgcp_0.0.20150429.orig.tar.xz c26d831912b703be61249efaf2e039e0124b7f74d1f9cd74211fbbf173acbabb 3670200 fitgcp_0.0.20150429-5.debian.tar.xz Files: d7df77cad7148007b1b4d30f82568b50 8368 fitgcp_0.0.20150429.orig.tar.xz 855040defe4153901f1d5bf9c76be71b 3670200 fitgcp_0.0.20150429-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmOtesoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHHkBAAkRuW3HKeE2f1ZfFXyKr4JftEmuXHK9sH DyRbqo0pQPosCE2M2JZc8u9mtHfv7k3/wLZLeKNdWKSpyi+2G/uPob3pfA6ng1kB wlN4SR7D7bubXfoF5ztlk3IL1dkQSYhT7zp7hwST2qgIWy50jPQVt1U9tpet6kNN Uq5E3uatMzjchCptGuXpigF7whJnt3HqeEIc5B1f9pLB6GLQx7jx1MW1RwDpX3MC dg0BKLgpjf2FesgtdBCxXTMi7TP8OhSZIjSHYpj0mD7Lwk4Q3wuzTBzely9BLeV7 PWT8ZstLFoWRoxuDinN3NPZVVjUJQIdpyTM0sumk46JRzHYZfafXXnGhAlE29OcP Ma3gkC/C6nAnwpeDb5eECaTEZJgraJd61P+KkHwzw4ApwzHIFqsZcqwMHOomlKxT lBqf6fbuhqlEjz8v/GyiUHaNWEhZPRpN1i1VRtgqKO6OS0w8JuhDd3zM+JUQsZKE kN/6LxlAB+et0OyQnxeUNwDQk01x17AN768OMZ1sFsqnTbcsqRr2TbgDloodvp4k rXXCFkrZa75wHYlF+qDq9mq9/jrM6OZtGr/Eh1yoAe7+WWcaF5YHh1QBNCCkZJpT 6lsr2Bkfkn2SPXr/WXFNpvNykPUWvdG5Un5xxP9qgoasQjDpK8MYLPmpLanqA4IV /kbTE4DrLfc= =APfd -----END PGP SIGNATURE----- Sun Mar 24 22:01:33 UTC 2024 I: Checking whether the package is not for us Sun Mar 24 22:01:33 UTC 2024 I: Starting 1st build on remote node cbxi4b-armhf-rb.debian.net. Sun Mar 24 22:01:33 UTC 2024 I: Preparing to do remote build '1' on cbxi4b-armhf-rb.debian.net. Sun Mar 24 22:08:27 UTC 2024 I: Deleting $TMPDIR on cbxi4b-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Mar 24 10:01:44 -12 2024 I: pbuilder-time-stamp: 1711317704 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [fitgcp_0.0.20150429-5.dsc] I: copying [./fitgcp_0.0.20150429.orig.tar.xz] I: copying [./fitgcp_0.0.20150429-5.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Dec 29 11:32:26 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fitgcp_0.0.20150429-5.dsc: no acceptable signature found dpkg-source: info: extracting fitgcp in fitgcp-0.0.20150429 dpkg-source: info: unpacking fitgcp_0.0.20150429.orig.tar.xz dpkg-source: info: unpacking fitgcp_0.0.20150429-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 2to3.patch dpkg-source: info: applying 2to3_additions.patch dpkg-source: info: applying numpy_1.24.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/12080/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='5d7b7ea304584658958904077c19fece' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='12080' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.84BOsvTU/pbuilderrc_mxDY --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.84BOsvTU/b1 --logfile b1/build.log fitgcp_0.0.20150429-5.dsc' SUDO_GID='116' SUDO_UID='112' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux cbxi4b 6.1.0-18-armmp #1 SMP Debian 6.1.76-1 (2024-02-01) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 23 11:29 /bin -> usr/bin I: user script /srv/workspace/pbuilder/12080/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3, python3-pysam dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19577 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-pysam; however: Package python3-pysam is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libcurl3-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libhts3{a} libhtscodecs2{a} libicu72{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpsl5{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-pysam{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 61 newly installed, 0 to remove and 0 not upgraded. Need to get 30.4 MB of archives. After unpacking 129 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.11-minimal armhf 3.11.8-1 [802 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.5.0-2+b2 [80.2 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.11-minimal armhf 3.11.8-1 [1707 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.11.6-1 [26.2 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024a-1 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-3 [69.1 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libreadline8 armhf 8.2-3+b1 [144 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libpython3.11-stdlib armhf 3.11.8-1 [1709 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf python3.11 armhf 3.11.8-1 [597 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.11.6-1 [9224 B] Get: 13 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.11.6-1 [26.2 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-2+b1 [314 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libmagic1 armhf 1:5.45-2+b1 [97.9 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-2+b1 [42.2 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-3 [1088 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.39.3-6 [81.2 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-1+b2 [33.4 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.0-3 [1367 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.14.1 [85.6 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 36 http://deb.debian.org/debian trixie/main armhf libelf1 armhf 0.190-1+b1 [171 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1 [101 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b2 [599 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf debhelper all 13.14.1 [890 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf python3-lib2to3 all 3.11.5-1 [77.5 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf python3-distutils all 3.11.5-1 [131 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 68.1.2-2 [241 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf python3-setuptools all 68.1.2-2 [468 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf dh-python all 6.20240310 [106 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b3 [284 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-4+b1 [18.2 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-4+b1 [50.1 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libldap-2.5-0 armhf 2.5.13+dfsg-5+b3 [158 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libnghttp2-14 armhf 1.59.0-1 [62.0 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [55.2 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libssh2-1 armhf 1.11.0-4 [197 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf libcurl3-gnutls armhf 8.5.0-2 [378 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libdeflate0 armhf 1.19-1 [39.1 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf libhtscodecs2 armhf 1.6.0-1+b1 [61.3 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libhts3 armhf 1.19+ds-1 [394 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf python3-pysam armhf 0.22.0+ds-1+b1 [3781 kB] Fetched 30.4 MB in 5s (5886 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19577 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.8-1_armhf.deb ... Unpacking libpython3.11-minimal:armhf (3.11.8-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.5.0-2+b2_armhf.deb ... Unpacking libexpat1:armhf (2.5.0-2+b2) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.8-1_armhf.deb ... Unpacking python3.11-minimal (3.11.8-1) ... Setting up libpython3.11-minimal:armhf (3.11.8-1) ... Setting up libexpat1:armhf (2.5.0-2+b2) ... Setting up python3.11-minimal (3.11.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19894 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.6-1_armhf.deb ... Unpacking python3-minimal (3.11.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-1_all.deb ... Unpacking tzdata (2024a-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-3_all.deb ... Unpacking readline-common (8.2-3) ... Selecting previously unselected package libreadline8:armhf. Preparing to unpack .../5-libreadline8_8.2-3+b1_armhf.deb ... Unpacking libreadline8:armhf (8.2-3+b1) ... Selecting previously unselected package libpython3.11-stdlib:armhf. Preparing to unpack .../6-libpython3.11-stdlib_3.11.8-1_armhf.deb ... Unpacking libpython3.11-stdlib:armhf (3.11.8-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.8-1_armhf.deb ... Unpacking python3.11 (3.11.8-1) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../8-libpython3-stdlib_3.11.6-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.11.6-1) ... Setting up python3-minimal (3.11.6-1) ... Selecting previously unselected package python3. (Reading database ... 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Setting up libssh2-1:armhf (1.11.0-4) ... Setting up netbase (6.4) ... Setting up libelf1:armhf (0.190-1+b1) ... Setting up readline-common (8.2-3) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libreadline8:armhf (8.2-3+b1) ... Setting up libldap-2.5-0:armhf (2.5.13+dfsg-5+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:armhf (3.11.8-1) ... Setting up libcurl3-gnutls:armhf (8.5.0-2) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3-stdlib:armhf (3.11.6-1) ... Setting up python3.11 (3.11.8-1) ... Setting up libhts3:armhf (1.19+ds-1) ... Setting up debhelper (13.14.1) ... Setting up python3 (3.11.6-1) ... Setting up python3-lib2to3 (3.11.5-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.11.5-1) ... Setting up python3-pysam (0.22.0+ds-1+b1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up dh-python (6.20240310) ... Processing triggers for libc-bin (2.37-15) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fitgcp-0.0.20150429/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fitgcp_0.0.20150429-5_source.changes dpkg-buildpackage: info: source package fitgcp dpkg-buildpackage: info: source version 0.0.20150429-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --with python3 dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/fitgcp/ dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_python3 dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/fitgcp-0.0.20150429' dh_fixperms find debian -name "*.py" -exec chmod 755 \{\} \; make[1]: Leaving directory '/build/reproducible-path/fitgcp-0.0.20150429' dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'fitgcp' in '../fitgcp_0.0.20150429-5_all.deb'. dpkg-genbuildinfo --build=binary -O../fitgcp_0.0.20150429-5_armhf.buildinfo dpkg-genchanges --build=binary -O../fitgcp_0.0.20150429-5_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/12080 and its subdirectories I: Current time: Sun Mar 24 10:08:07 -12 2024 I: pbuilder-time-stamp: 1711318087 Sun Mar 24 22:08:30 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ff64a-armhf-rb.debian.net. Sun Mar 24 22:08:30 UTC 2024 I: Preparing to do remote build '2' on ff64a-armhf-rb.debian.net. Sun Mar 24 22:13:02 UTC 2024 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. Sun Mar 24 22:13:05 UTC 2024 I: fitgcp_0.0.20150429-5_armhf.changes: Format: 1.8 Date: Thu, 29 Dec 2022 11:41:12 +0100 Source: fitgcp Binary: fitgcp Architecture: all Version: 0.0.20150429-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: fitgcp - fitting genome coverage distributions with mixture models Closes: 1027199 Changes: fitgcp (0.0.20150429-5) unstable; urgency=medium . * Standards-Version: 4.6.2 (routine-update) * debhelper-compat 13 (routine-update) * Set upstream metadata fields: Archive. * Fix AttributeError: module 'numpy' has no attribute 'int' Closes: #1027199 Checksums-Sha1: 76962590be9f3bb004ba2b46bdedd835f7b36a49 3675556 fitgcp_0.0.20150429-5_all.deb 05134c46f0212b8c13ffdab1eaf623521224035b 6197 fitgcp_0.0.20150429-5_armhf.buildinfo Checksums-Sha256: 307132bcde037065d1602362f025c2d0fbc968351dd522c3d99b228d8ed5e437 3675556 fitgcp_0.0.20150429-5_all.deb d22bcf224bbef6cc5a41eb658992c1dcaf618aeee45805e53ff10a483e467be1 6197 fitgcp_0.0.20150429-5_armhf.buildinfo Files: a657acb87dccc3c25bda71f1017cd38e 3675556 science optional fitgcp_0.0.20150429-5_all.deb 90538db52f0e4eb7c43246023168e340 6197 science optional fitgcp_0.0.20150429-5_armhf.buildinfo Sun Mar 24 22:13:06 UTC 2024 I: diffoscope 261 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_23-886.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.84BOsvTU/fitgcp_0.0.20150429-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.84BOsvTU/fitgcp_0.0.20150429-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.84BOsvTU/fitgcp_0.0.20150429-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.84BOsvTU/b1/fitgcp_0.0.20150429-5_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.84BOsvTU/b2/fitgcp_0.0.20150429-5_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.347s) 0.347s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.052s) 0.052s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 645ms CPU time consumed: 646ms Sun Mar 24 22:13:07 UTC 2024 I: diffoscope 261 found no differences in the changes files, and a .buildinfo file also exists. Sun Mar 24 22:13:07 UTC 2024 I: fitgcp from trixie built successfully and reproducibly on armhf. Sun Mar 24 22:13:09 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Mar 24 22:13:09 UTC 2024 I: Submitting 8.0K b1/fitgcp_0.0.20150429-5_armhf.buildinfo.asc Sun Mar 24 22:13:10 UTC 2024 I: Submitting 8.0K b2/fitgcp_0.0.20150429-5_armhf.buildinfo.asc Sun Mar 24 22:13:11 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Mar 24 22:13:11 UTC 2024 I: Done submitting .buildinfo files. Sun Mar 24 22:13:11 UTC 2024 I: Removing signed fitgcp_0.0.20150429-5_armhf.buildinfo.asc files: removed './b1/fitgcp_0.0.20150429-5_armhf.buildinfo.asc' removed './b2/fitgcp_0.0.20150429-5_armhf.buildinfo.asc'