Mon May 6 05:57:02 UTC 2024 I: starting to build examl/trixie/armhf on jenkins on '2024-05-06 05:56' Mon May 6 05:57:02 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_12/3937/console.log Mon May 6 05:57:02 UTC 2024 I: Downloading source for trixie/examl=3.0.22-5 --2024-05-06 05:57:03-- http://deb.debian.org/debian/pool/main/e/examl/examl_3.0.22-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2012 (2.0K) [text/prs.lines.tag] Saving to: ‘examl_3.0.22-5.dsc’ 0K . 100% 270M=0s 2024-05-06 05:57:03 (270 MB/s) - ‘examl_3.0.22-5.dsc’ saved [2012/2012] Mon May 6 05:57:03 UTC 2024 I: examl_3.0.22-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: examl Binary: examl Architecture: any Version: 3.0.22-5 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/stamatak/ExaML Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/examl Vcs-Git: https://salsa.debian.org/med-team/examl.git Testsuite: autopkgtest Testsuite-Triggers: pocl-opencl-icd Build-Depends: debhelper-compat (= 13), libopenmpi-dev, libsimde-dev, debhelper Package-List: examl deb science optional arch=any Checksums-Sha1: fe8373864ad1825b8eab7c76317090bfc2a180f6 941388 examl_3.0.22.orig.tar.gz ad34d9f9446dcf8a73841a353838ad601bca9c3d 27288 examl_3.0.22-5.debian.tar.xz Checksums-Sha256: 802e673b0c2ea83fdbe6b060048d83f22b6978933a04be64fb9b4334fe318ca3 941388 examl_3.0.22.orig.tar.gz 6e8e414b0dc7b91dc2a7a3eb3088ce87c16e166b458eafb4a8eae8bc69cb1748 27288 examl_3.0.22-5.debian.tar.xz Files: ad62d8c333cee316732c10f719c1e87c 941388 examl_3.0.22.orig.tar.gz 0c5840ca661a83ac09967b38fe7fcc32 27288 examl_3.0.22-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmYX9NURHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtESohAAmUK2zLgKPwT5K9QG5MIelc8+pNGHemd9 E+JwTIQ/aI8CjNZvRwgeRtEJ4YFOiaJRzTl1kjbi2njOeaAUSoKQzKAdapLlvg6b 7a0TPD5Vdcq6Yh27WUhQBpqzqgLNKWfGmEqgz6HWWqX33gS1LOsBLk+gncLP2s2g VpkJbzC4U+OHxDuIgE6KdAsvTdJ4VhEypRiLoVMFvzHhZUtV3csTv77KpB+ZhjPd EqeWyRCcc0aWDhdIQmtXU/OL/hTz42vX2AvxTLn/iUfmGLdmxFj9hT2mRKg52lax H1F4jddWvtQK7kMxksiLkWD6XzdVF+B6EfAhML8Q8RU0Bcn+Vkub7Arbh9+EpQqB SeUsclDARZ9OfW1+LlebKZvNrjli6gGYvqA90AldQ6VLdf7LgERa3tO7nS98jD2Y jq71S9R2BwQ103ZbuffzlgFMPcJF+Gzohyegxm9Z7mFdQZfuz1+QaKAafqeSSU4x iXaFPDYS7L250dTvHLSO27WNl4i2gIivNXONBwQoWJ8Suaizz7YkWDCMoczhq7ut RoidniYqjcC2ZiIvry4sHM/3JbUjihcs203vJYQMN+vDcjPAZ6P7oF4OgaLEpXvq AsEq1TlnI68lrHLigVnfz3SnN2HI9M+GxfmEerev7M0EbNGy0uNdyup0Qk4VJSkx 4Vnbqxlqrqw= =NGDR -----END PGP SIGNATURE----- Mon May 6 05:57:03 UTC 2024 I: Checking whether the package is not for us Mon May 6 05:57:03 UTC 2024 I: Starting 1st build on remote node virt64a-armhf-rb.debian.net. Mon May 6 05:57:03 UTC 2024 I: Preparing to do remote build '1' on virt64a-armhf-rb.debian.net. Mon May 6 06:00:09 UTC 2024 I: Deleting $TMPDIR on virt64a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun May 5 17:57:09 -12 2024 I: pbuilder-time-stamp: 1714975029 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [examl_3.0.22-5.dsc] I: copying [./examl_3.0.22.orig.tar.gz] I: copying [./examl_3.0.22-5.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Apr 11 14:33:57 2024 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./examl_3.0.22-5.dsc: no acceptable signature found dpkg-source: info: extracting examl in examl-3.0.22 dpkg-source: info: unpacking examl_3.0.22.orig.tar.gz dpkg-source: info: unpacking examl_3.0.22-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying simde dpkg-source: info: applying fix_implicit_declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/14146/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='5564403c14ea4b63a17c050703be5e7a' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='14146' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JTeOBtGZ/pbuilderrc_JuJJ --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JTeOBtGZ/b1 --logfile b1/build.log examl_3.0.22-5.dsc' SUDO_GID='114' SUDO_UID='108' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64a 6.1.0-20-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 5 11:24 /bin -> usr/bin I: user script /srv/workspace/pbuilder/14146/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libopenmpi-dev, libsimde-dev, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19444 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libopenmpi-dev; however: Package libopenmpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran-13{a} gfortran-13-arm-linux-gnueabihf{a} groff-base{a} ibverbs-providers{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcbor0.10{a} libcom-err2{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libfabric1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-13-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu72{a} libjs-jquery{a} libjs-jquery-ui{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3t64{a} libpciaccess0{a} libpipeline1{a} librdmacm1t64{a} libsimde-dev{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} m4{a} man-db{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common krb5-locales libarchive-cpio-perl libmail-sendmail-perl lynx wget xauth 0 packages upgraded, 84 newly installed, 0 to remove and 0 not upgraded. Need to get 38.8 MB of archives. After unpacking 141 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-4 [1090 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40-8 [85.6 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libbsd0 armhf 0.12.2-1 [127 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf libedit2 armhf 3.1-20230828-1+b1 [77.6 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf libcbor0.10 armhf 0.10.2-1.1 [23.9 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf libfido2-1 armhf 1.14.0-1+b2 [70.4 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.20.1-6+b1 [30.6 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.1~rc2-1 [21.8 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.20.1-6+b1 [75.5 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-3 [7908 B] Get: 19 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.20.1-6+b1 [290 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.20.1-6+b1 [112 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf openssh-client armhf 1:9.7p1-4 [870 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 34 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14-20240330-1 [264 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libgfortran-13-dev armhf 13.2.0-24 [306 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf gfortran-13-arm-linux-gnueabihf armhf 13.2.0-24 [8200 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf gfortran-13 armhf 13.2.0-24 [12.2 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libnl-3-200 armhf 3.7.0-0.3 [51.7 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf libnl-route-3-200 armhf 3.7.0-0.3 [153 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libibverbs1 armhf 50.0-2+b1 [55.0 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf ibverbs-providers armhf 50.0-2+b1 [28.7 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [164 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libevent-core-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [122 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libevent-extra-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [99.2 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libevent-pthreads-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [53.8 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libevent-openssl-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [58.7 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libevent-dev armhf 2.1.12-stable-8.1+b3 [293 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf librdmacm1t64 armhf 50.0-2+b1 [62.1 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf libfabric1 armhf 1.17.0-3+b1 [386 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libhwloc15 armhf 2.10.0-1+b1 [133 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf libnuma1 armhf 2.0.18-1 [18.5 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libnuma-dev armhf 2.0.18-1 [34.2 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libltdl7 armhf 2.4.7-7+b1 [390 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf libltdl-dev armhf 2.4.7-7+b1 [162 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf libhwloc-dev armhf 2.10.0-1+b1 [223 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf libpciaccess0 armhf 0.17-3+b1 [49.3 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.9-1+b1 [17.4 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.2-3+b1 [23.0 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.15-1 [140 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.7-1 [328 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.7-1+b1 [739 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b1 [47.8 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf libxnvctrl0 armhf 535.171.04-1 [12.8 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf ocl-icd-libopencl1 armhf 2.3.2-1+b1 [37.3 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf libhwloc-plugins armhf 2.10.0-1+b1 [16.1 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf libnl-3-dev armhf 3.7.0-0.3 [94.3 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf libnl-route-3-dev armhf 3.7.0-0.3 [180 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf libibverbs-dev armhf 50.0-2+b1 [198 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf libopenmpi3t64 armhf 4.1.6-13.2 [2198 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf openmpi-common all 4.1.6-13.2 [169 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg-3.1 [904 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf openmpi-bin armhf 4.1.6-13.2 [195 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf libopenmpi-dev armhf 4.1.6-13.2 [1020 kB] Get: 84 http://deb.debian.org/debian trixie/main armhf libsimde-dev all 0.8.2-1 [465 kB] Fetched 38.8 MB in 1s (50.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19444 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-4_armhf.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40-8_armhf.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../08-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... 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Setting up libpipeline1:armhf (1.5.7-2) ... Setting up libsimde-dev (0.8.2-1) ... Setting up libpciaccess0:armhf (0.17-3+b1) ... Setting up libxau6:armhf (1:1.0.9-1+b1) ... Setting up libkeyutils1:armhf (1.6.3-3) ... Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.40-8) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libcbor0.10:armhf (0.10.2-1.1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libevent-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up libcom-err2:armhf (1.47.1~rc2-1) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up libkrb5support0:armhf (1.20.1-6+b1) ... Setting up autotools-dev (20220109.1) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libhwloc15:armhf (2.10.0-1+b1) ... Setting up autopoint (0.21-14) ... Setting up libk5crypto3:armhf (1.20.1-6+b1) ... Setting up libltdl7:armhf (2.4.7-7+b1) ... Setting up libgfortran5:armhf (14-20240330-1) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg-3.1) ... Setting up libnuma1:armhf (2.0.18-1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up ocl-icd-libopencl1:armhf (2.3.2-1+b1) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libnl-3-200:armhf (3.7.0-0.3) ... Setting up openmpi-common (4.1.6-13.2) ... Setting up libsub-override-perl (0.10-1) ... Setting up libkrb5-3:armhf (1.20.1-6+b1) ... Setting up libevent-core-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:armhf (1.14.0-1+b2) ... Setting up libgfortran-13-dev:armhf (13.2.0-24) ... Setting up libbsd0:armhf (0.12.2-1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gfortran-13-arm-linux-gnueabihf (13.2.0-24) ... Setting up libxdmcp6:armhf (1:1.1.2-3+b1) ... Setting up libxcb1:armhf (1.15-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libevent-pthreads-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up libedit2:armhf (3.1-20230828-1+b1) ... Setting up libevent-openssl-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:armhf (2.0.18-1) ... Setting up libnl-route-3-200:armhf (3.7.0-0.3) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:armhf (2.4.7-7+b1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up gfortran-13 (13.2.0-24) ... Setting up libgssapi-krb5-2:armhf (1.20.1-6+b1) ... Setting up libevent-extra-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libnl-3-dev:armhf (3.7.0-0.3) ... Setting up groff-base (1.23.0-4) ... Setting up libx11-6:armhf (2:1.8.7-1+b1) ... Setting up libhwloc-dev:armhf (2.10.0-1+b1) ... Setting up libibverbs1:armhf (50.0-2+b1) ... Setting up ibverbs-providers:armhf (50.0-2+b1) ... Setting up openssh-client (1:9.7p1-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:armhf (2:1.3.4-1+b1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxnvctrl0:armhf (535.171.04-1) ... Setting up libnl-route-3-dev:armhf (3.7.0-0.3) ... Setting up libevent-dev (2.1.12-stable-8.1+b3) ... Setting up librdmacm1t64:armhf (50.0-2+b1) ... Setting up libfabric1:armhf (1.17.0-3+b1) ... Setting up debhelper (13.15.3) ... Setting up libibverbs-dev:armhf (50.0-2+b1) ... Setting up libhwloc-plugins:armhf (2.10.0-1+b1) ... Setting up libopenmpi3t64:armhf (4.1.6-13.2) ... Setting up openmpi-bin (4.1.6-13.2) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:armhf (4.1.6-13.2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode Processing triggers for libc-bin (2.38-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/examl-3.0.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../examl_3.0.22-5_source.changes dpkg-buildpackage: info: source package examl dpkg-buildpackage: info: source version 3.0.22-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --sourcedirectory=examl debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/examl-3.0.22' dh_auto_clean /usr/bin/make --directory=parser -f Makefile.SSE3.gcc clean make[2]: Entering directory '/build/reproducible-path/examl-3.0.22/parser' rm -f *.o parse-examl"" make[2]: Leaving directory '/build/reproducible-path/examl-3.0.22/parser' find examl -executable -type f -delete make[1]: Leaving directory '/build/reproducible-path/examl-3.0.22' dh_autoreconf_clean -O--sourcedirectory=examl dh_clean -O--sourcedirectory=examl debian/rules binary dh binary --sourcedirectory=examl dh_update_autotools_config -O--sourcedirectory=examl dh_autoreconf -O--sourcedirectory=examl dh_auto_configure -O--sourcedirectory=examl debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/examl-3.0.22' dh_auto_build /usr/bin/make --directory=examl -f Makefile.AVX.gcc make[2]: Entering directory '/build/reproducible-path/examl-3.0.22/examl' rm -f *.o examl"" mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o axml.o axml.c In function ‘initializePartitions’, inlined from ‘initializeTree’ at axml.c:2217:3, inlined from ‘main’ at axml.c:2631:5: axml.c:2121:40: warning: argument 1 range [2147483648, 4294967295] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 2121 | *modelWeights = (unsigned long*) calloc(tr->NumberOfModels, sizeof(unsigned long)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from axml.c:44: /usr/include/stdlib.h: In function ‘main’: /usr/include/stdlib.h:675:14: note: in a call to allocation function ‘calloc’ declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o optimizeModel.o optimizeModel.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o trash.o trash.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o searchAlgo.o searchAlgo.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o topologies.o topologies.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o treeIO.o treeIO.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O1 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o models.o models.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o evaluatePartialGenericSpecial.o evaluatePartialGenericSpecial.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o evaluateGenericSpecial.o evaluateGenericSpecial.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o newviewGenericSpecial.o newviewGenericSpecial.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o makenewzGenericSpecial.o makenewzGenericSpecial.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bipartitionList.o bipartitionList.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o restartHashTable.o restartHashTable.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o avxLikelihood.o avxLikelihood.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o byteFile.o byteFile.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o partitionAssignment.o partitionAssignment.c partitionAssignment.c: In function ‘printAssignment’: partitionAssignment.c:457:21: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 457 | printf("p: %d\t(%lu,%lu) -> proc %d\n", a.partId, a.offset, a.width , procid); | ~~^ ~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u partitionAssignment.c:457:25: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 457 | printf("p: %d\t(%lu,%lu) -> proc %d\n", a.partId, a.offset, a.width , procid); | ~~^ ~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u partitionAssignment.c: In function ‘printAssignments’: partitionAssignment.c:470:25: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 470 | printf("%d\t%lu\t%lu\t%d\n", i,a.offset, a.width, a.partId); | ~~^ ~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u partitionAssignment.c:470:30: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 470 | printf("%d\t%lu\t%lu\t%d\n", i,a.offset, a.width, a.partId); | ~~^ ~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u partitionAssignment.c: In function ‘printLoad’: partitionAssignment.c:498:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 498 | printf("%d\t%d\t%lu\n", i, numsPerProc[i], sitesPerProc[i]); | ~~^ ~~~~~~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o communication.o communication.c mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -D_OPTIMIZED_FUNCTIONS -D_GNU_SOURCE -fomit-frame-pointer -funroll-loops -D_USE_ALLREDUCE -O2 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o quartets.o quartets.c mpicc -o examl"" axml.o optimizeModel.o trash.o searchAlgo.o topologies.o treeIO.o models.o evaluatePartialGenericSpecial.o evaluateGenericSpecial.o newviewGenericSpecial.o makenewzGenericSpecial.o bipartitionList.o restartHashTable.o avxLikelihood.o byteFile.o partitionAssignment.o communication.o quartets.o -lm -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/examl-3.0.22/examl' /usr/bin/make --directory=examl -f Makefile.OMP.AVX.gcc make[2]: Entering directory '/build/reproducible-path/examl-3.0.22/examl' mpicc -o examl-OMP"" axml.o optimizeModel.o trash.o searchAlgo.o topologies.o treeIO.o models.o evaluatePartialGenericSpecial.o evaluateGenericSpecial.o newviewGenericSpecial.o makenewzGenericSpecial.o bipartitionList.o restartHashTable.o avxLikelihood.o byteFile.o partitionAssignment.o communication.o quartets.o -lm -fopenmp -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/examl-3.0.22/examl' /usr/bin/make --directory=parser -f Makefile.SSE3.gcc make[2]: Entering directory '/build/reproducible-path/examl-3.0.22/parser' rm -f *.o parse-examl"" gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fomit-frame-pointer -O2 -D_GNU_SOURCE -funroll-loops -Wall -Wunused-parameter -Wredundant-decls -Wreturn-type -Wswitch-default -Wunused-value -Wimplicit -Wimplicit-function-declaration -Wimplicit-int -Wimport -Wunused -Wunused-function -Wunused-label -Wno-int-to-pointer-cast -Wbad-function-cast -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wold-style-definition -Wstrict-prototypes -Wpointer-sign -Wextra -Wredundant-decls -Wunused -Wunused-function -Wunused-parameter -Wunused-value -Wunused-variable -Wformat -Wformat-nonliteral -Wparentheses -Wsequence-point -Wuninitialized -Wundef -Wbad-function-cast -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o axml.o axml.c axml.c: In function ‘genericBaseFrequencies’: axml.c:2509:26: warning: comparison is always true due to limited range of data type [-Wtype-limits] 2509 | if(yptr[j] >= 0 && yptr[j] < 20) | ^~ gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/examl-3.0.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fomit-frame-pointer -O2 -D_GNU_SOURCE -funroll-loops -Wall -Wunused-parameter -Wredundant-decls -Wreturn-type -Wswitch-default -Wunused-value -Wimplicit -Wimplicit-function-declaration -Wimplicit-int -Wimport -Wunused -Wunused-function -Wunused-label -Wno-int-to-pointer-cast -Wbad-function-cast -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wold-style-definition -Wstrict-prototypes -Wpointer-sign -Wextra -Wredundant-decls -Wunused -Wunused-function -Wunused-parameter -Wunused-value -Wunused-variable -Wformat -Wformat-nonliteral -Wparentheses -Wsequence-point -Wuninitialized -Wundef -Wbad-function-cast -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o parsePartitions.o parsePartitions.c gcc -o parse-examl"" axml.o parsePartitions.o -lm -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/examl-3.0.22/parser' make[1]: Leaving directory '/build/reproducible-path/examl-3.0.22' dh_auto_test -O--sourcedirectory=examl create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedirectory=examl dh_prep -O--sourcedirectory=examl debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/examl-3.0.22' dh_install examl/{examl,examl-OMP} parser/parse-examl /usr/bin/ make[1]: Leaving directory '/build/reproducible-path/examl-3.0.22' dh_installdocs -O--sourcedirectory=examl dh_installchangelogs -O--sourcedirectory=examl dh_installman -O--sourcedirectory=examl dh_installsystemduser -O--sourcedirectory=examl dh_perl -O--sourcedirectory=examl dh_link -O--sourcedirectory=examl dh_strip_nondeterminism -O--sourcedirectory=examl dh_compress -O--sourcedirectory=examl dh_fixperms -O--sourcedirectory=examl dh_missing -O--sourcedirectory=examl dh_dwz -a -O--sourcedirectory=examl dh_strip -a -O--sourcedirectory=examl dh_makeshlibs -a -O--sourcedirectory=examl dh_shlibdeps -a -O--sourcedirectory=examl dh_installdeb -O--sourcedirectory=examl debian/rules override_dh_gencontrol make[1]: Entering directory '/build/reproducible-path/examl-3.0.22' dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.8.2-1), " make[1]: Leaving directory '/build/reproducible-path/examl-3.0.22' dh_md5sums -O--sourcedirectory=examl dh_builddeb -O--sourcedirectory=examl dpkg-deb: building package 'examl' in '../examl_3.0.22-5_armhf.deb'. dpkg-deb: building package 'examl-dbgsym' in '../examl-dbgsym_3.0.22-5_armhf.deb'. dpkg-genbuildinfo --build=binary -O../examl_3.0.22-5_armhf.buildinfo dpkg-genchanges --build=binary -O../examl_3.0.22-5_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/14146 and its subdirectories I: Current time: Sun May 5 17:59:56 -12 2024 I: pbuilder-time-stamp: 1714975196 Mon May 6 06:00:11 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt32b-armhf-rb.debian.net. Mon May 6 06:00:11 UTC 2024 I: Preparing to do remote build '2' on virt32b-armhf-rb.debian.net. Mon May 6 06:03:43 UTC 2024 I: Deleting $TMPDIR on virt32b-armhf-rb.debian.net. Mon May 6 06:03:46 UTC 2024 I: examl_3.0.22-5_armhf.changes: Format: 1.8 Date: Thu, 11 Apr 2024 16:21:07 +0200 Source: examl Binary: examl examl-dbgsym Architecture: armhf Version: 3.0.22-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: examl - Exascale Maximum Likelihood (ExaML) code for phylogenetic inferen Closes: 1066386 Changes: examl (3.0.22-5) unstable; urgency=medium . * Add missing include Closes: #1066386 * Standards-Version: 4.7.0 (routine-update) Checksums-Sha1: b498a0679e95f73185efd830bf720b7c94ebc60a 508892 examl-dbgsym_3.0.22-5_armhf.deb da56bd1862f7973055cefa8197b292ff1ca64991 6827 examl_3.0.22-5_armhf.buildinfo 56c0dce1e2e3d679be0aeb5e4e44dcf866c15d5b 803876 examl_3.0.22-5_armhf.deb Checksums-Sha256: 6d1bc6a2218d7b91d668ed62e96a11c919a53fc53d081ca46ad91c47ee5e0f2f 508892 examl-dbgsym_3.0.22-5_armhf.deb 1426ca3eaf397d4052582fca5600801139c72ed97294fd5896f42e522fa3bcee 6827 examl_3.0.22-5_armhf.buildinfo 272f328af09bcc9519b650e8ffa7d8de40dca2a6d6e7394b9c4c6fa8c27b80cf 803876 examl_3.0.22-5_armhf.deb Files: 70998ef668f6f5430d7346f4ae4f82fa 508892 debug optional examl-dbgsym_3.0.22-5_armhf.deb cee034934f7fd7b2b65e84db26c042e3 6827 science optional examl_3.0.22-5_armhf.buildinfo eaa0515baf022ac6032a4cf73cd71a5f 803876 science optional examl_3.0.22-5_armhf.deb Mon May 6 06:03:47 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_12-3937.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.JTeOBtGZ/examl_3.0.22-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.JTeOBtGZ/examl_3.0.22-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.JTeOBtGZ/examl_3.0.22-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.JTeOBtGZ/b1/examl_3.0.22-5_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.JTeOBtGZ/b2/examl_3.0.22-5_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.377s) 0.377s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.031s) 0.031s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 759ms CPU time consumed: 757ms Mon May 6 06:03:48 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Mon May 6 06:03:48 UTC 2024 I: examl from trixie built successfully and reproducibly on armhf. Mon May 6 06:03:50 UTC 2024 I: Submitting .buildinfo files to external archives: Mon May 6 06:03:50 UTC 2024 I: Submitting 8.0K b1/examl_3.0.22-5_armhf.buildinfo.asc Mon May 6 06:03:51 UTC 2024 I: Submitting 8.0K b2/examl_3.0.22-5_armhf.buildinfo.asc Mon May 6 06:03:51 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 6 06:03:51 UTC 2024 I: Done submitting .buildinfo files. Mon May 6 06:03:51 UTC 2024 I: Removing signed examl_3.0.22-5_armhf.buildinfo.asc files: removed './b1/examl_3.0.22-5_armhf.buildinfo.asc' removed './b2/examl_3.0.22-5_armhf.buildinfo.asc'