Fri Apr 19 13:28:03 UTC 2024 I: starting to build cassiopee/trixie/armhf on jenkins on '2024-04-19 13:27' Fri Apr 19 13:28:03 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_6/3464/console.log Fri Apr 19 13:28:03 UTC 2024 I: Downloading source for trixie/cassiopee=1.0.9-4 --2024-04-19 13:28:03-- http://deb.debian.org/debian/pool/main/c/cassiopee/cassiopee_1.0.9-4.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2373 (2.3K) [text/prs.lines.tag] Saving to: ‘cassiopee_1.0.9-4.dsc’ 0K .. 100% 183M=0s 2024-04-19 13:28:03 (183 MB/s) - ‘cassiopee_1.0.9-4.dsc’ saved [2373/2373] Fri Apr 19 13:28:03 UTC 2024 I: cassiopee_1.0.9-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cassiopee Binary: cassiopee, libcassie-doc, libcassie1v5, libcassie-dev Architecture: any all Version: 1.0.9-4 Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou Homepage: https://github.com/osallou/cassiopee-c Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/cassiopee Vcs-Git: https://salsa.debian.org/med-team/cassiopee.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, doxygen, libboost-serialization-dev, libboost-iostreams-dev, libgoogle-glog-dev, libcppunit-dev Package-List: cassiopee deb science optional arch=any libcassie-dev deb libdevel optional arch=any libcassie-doc deb doc optional arch=all libcassie1v5 deb libs optional arch=any Checksums-Sha1: a25a0e8173ad9c5f91427f8235414ee9063d343a 60576 cassiopee_1.0.9.orig.tar.gz 788742371d6720dbb55744190dfac609174969b1 5064 cassiopee_1.0.9-4.debian.tar.xz Checksums-Sha256: f02d72bbc18e858af68fb0a25d2e5d00b52d3ab5ef33d2e6731d8ff3d8bce35a 60576 cassiopee_1.0.9.orig.tar.gz f91556d7d610caa52f2c79703a528e40f47169f086849fd971859eef67c05460 5064 cassiopee_1.0.9-4.debian.tar.xz Files: 4fc0d2239a849e8075e2941210455bec 60576 cassiopee_1.0.9.orig.tar.gz c426bd10014f9753db9be7211feb916c 5064 cassiopee_1.0.9-4.debian.tar.xz Dgit: 2a53a1a0bd35877cf5f23429fe18c5e34db10036 debian archive/debian/1.0.9-4 https://git.dgit.debian.org/cassiopee -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmWALicUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdoE2w/+Pd3wWjPJ5RpGgk2K2xlqmQhbCZA6 r4W5iRwKZR0dMO8emtrdEdvnwgZiTjIYUt33WlTY1l/jw2qWKdPTDTcy0s4A2qug xy1nfvtOz6dN4eeO8PulhCbxLFNBXceMNFj/ozFhS9mFg+UixxbEIuaZ1iuWoWH2 0bRqT/FdmbNevQiKrttpKR1yqD4D3SnrktsQzdN01jfbGWAFRK8jbo2ZSW1jY5PQ CwZY0bofxtgPnyALd/hyZY6EGbf5hZ6/wvtyGuNWzmdwrkR0heO+uoQW/L0NQ2iB qGsUyOfX3bGPTldWX7jjlY3oXUF7d1HLAieJT/h5Xpyj+q8zBgJg6pKT1QR/8CDD 1oy4b0CvGnepzemHAkUW2OQtUZd+gVMi9/HmCxOdOG1B7QH7cb4ZCwvk3G3mID75 JfV5oHmY34egmeciKuMAKZyaVFQIRzuDOpMKMLxVGBwqbXhS61j9CpAJSVqcke4V gnaNTFBJH8vdkQJ8FFEfjcN2XlC/hfp5kArqrcJJGHp4qo9oly60YG9jrZlO84Zy LXbUlBlFTnEvl2wyMv1H1b7wBZenIkrRpa+vxU2nOa3/qeSiP1U3bBOFfmWhYYyC e5wVxpgVu6YumOMVPi9Dvw74L7QHNBkEBh4i8iq7fmUJiEQkbEiFEXT9a8tllsLc IgPToZlCKYFerds= =nntK -----END PGP SIGNATURE----- Fri Apr 19 13:28:03 UTC 2024 I: Checking whether the package is not for us Fri Apr 19 13:28:03 UTC 2024 I: Starting 1st build on remote node virt64b-armhf-rb.debian.net. Fri Apr 19 13:28:03 UTC 2024 I: Preparing to do remote build '1' on virt64b-armhf-rb.debian.net. Fri Apr 19 13:35:17 UTC 2024 I: Deleting $TMPDIR on virt64b-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Apr 19 01:28:12 -12 2024 I: pbuilder-time-stamp: 1713533292 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cassiopee_1.0.9-4.dsc] I: copying [./cassiopee_1.0.9.orig.tar.gz] I: copying [./cassiopee_1.0.9-4.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Dec 18 11:33:59 2023 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cassiopee_1.0.9-4.dsc: no acceptable signature found dpkg-source: info: extracting cassiopee in cassiopee-1.0.9 dpkg-source: info: unpacking cassiopee_1.0.9.orig.tar.gz dpkg-source: info: unpacking cassiopee_1.0.9-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3680/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='d02d8fa38e944124ae8bd67cc33d5c5d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3680' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ttAvIGRh/pbuilderrc_YTig --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ttAvIGRh/b1 --logfile b1/build.log cassiopee_1.0.9-4.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64b 6.1.0-20-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 17 11:24 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3680/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, doxygen, libboost-serialization-dev, libboost-iostreams-dev, libgoogle-glog-dev, libcppunit-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19635 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libgoogle-glog-dev; however: Package libgoogle-glog-dev is not installed. pbuilder-satisfydepends-dummy depends on libcppunit-dev; however: Package libcppunit-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libbsd0{a} libclang-cpp16{a} libclang1-16{a} libcppunit-1.15-0{a} libcppunit-dev{a} libcurl4{a} libdebhelper-perl{a} libedit2{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfmt9{a} libgflags-dev{a} libgflags2.2{a} libgoogle-glog-dev{a} libgoogle-glog0v6{a} libicu-dev{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libllvm16{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} libz3-4{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 72 newly installed, 0 to remove and 0 not upgraded. Need to get 98.7 MB of archives. After unpacking 547 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-4 [55.7 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-4 [864 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-2+b1 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf libmagic1 armhf 1:5.45-2+b1 [97.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-2+b1 [42.2 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-3 [1088 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.39.3-6 [81.2 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.0-3 [1367 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b2 [599 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf libarchive13 armhf 3.7.2-1 [301 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b3 [284 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-4+b1 [18.2 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-4+b1 [50.1 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libldap-2.5-0 armhf 2.5.13+dfsg-5+b3 [158 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf libnghttp2-14 armhf 1.59.0-1 [62.0 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [55.2 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf libssh2-1 armhf 1.11.0-4 [197 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libcurl4 armhf 8.5.0-2 [383 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf libjsoncpp25 armhf 1.9.5-6+b2 [69.9 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf librhash0 armhf 1.4.3-3+b1 [143 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libuv1 armhf 1.48.0-1 [133 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf cmake-data all 3.28.3-1 [2128 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf cmake armhf 3.28.3-1 [5109 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 43 http://deb.debian.org/debian trixie/main armhf libelf1 armhf 0.190-1+b1 [171 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1 [101 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf libbsd0 armhf 0.12.2-1 [127 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libedit2 armhf 3.1-20230828-1 [76.8 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libz3-4 armhf 4.8.12-3.1+b2 [6324 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libllvm16 armhf 1:16.0.6-20 [20.6 MB] Get: 53 http://deb.debian.org/debian trixie/main armhf libclang-cpp16 armhf 1:16.0.6-20 [9875 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libclang1-16 armhf 1:16.0.6-20 [5545 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libfmt9 armhf 9.1.0+ds1-2 [105 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf doxygen armhf 1.9.8+ds-2 [4458 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf icu-devtools armhf 72.1-4+b1 [185 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libboost1.83-dev armhf 1.83.0-2+b2 [10.6 MB] Get: 59 http://deb.debian.org/debian trixie/main armhf libboost-regex1.83.0 armhf 1.83.0-2+b2 [307 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libicu-dev armhf 72.1-4+b1 [10.1 MB] Get: 61 http://deb.debian.org/debian trixie/main armhf libboost-regex1.83-dev armhf 1.83.0-2+b2 [335 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf libboost-iostreams1.83-dev armhf 1.83.0-2+b2 [260 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf libboost-iostreams-dev armhf 1.83.0.2+b2 [3568 B] Get: 64 http://deb.debian.org/debian trixie/main armhf libboost-serialization1.83.0 armhf 1.83.0-2+b2 [315 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libboost-serialization1.83-dev armhf 1.83.0-2+b2 [385 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf libboost-serialization-dev armhf 1.83.0.2+b2 [3816 B] Get: 67 http://deb.debian.org/debian trixie/main armhf libcppunit-1.15-0 armhf 1.15.1-4+b1 [140 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libcppunit-dev armhf 1.15.1-4+b1 [203 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf libgflags2.2 armhf 2.2.2-2 [66.4 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf libgflags-dev armhf 2.2.2-2 [88.6 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf libgoogle-glog0v6 armhf 0.6.0-2 [54.9 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libgoogle-glog-dev armhf 0.6.0-2 [93.1 kB] Fetched 98.7 MB in 3s (33.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19635 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-4_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-4_armhf.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.22_all.deb ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/cassiopee-1.0.9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cassiopee_1.0.9-4_source.changes dpkg-buildpackage: info: source package cassiopee dpkg-buildpackage: info: source version 1.0.9-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0/BoostConfig.cmake (found version "1.83.0") found components: iostreams serialization -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen missing components: dot -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Configuring done (6.1s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf dh_auto_build cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/cassiopee-1.0.9 -B/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f CMakeFiles/doc.dir/build.make CMakeFiles/doc.dir/depend make -f src/CMakeFiles/cassie.dir/build.make src/CMakeFiles/cassie.dir/depend make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/CMakeFiles/doc.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src/CMakeFiles/cassie.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f CMakeFiles/doc.dir/build.make CMakeFiles/doc.dir/build make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/cassie.dir/build.make src/CMakeFiles/cassie.dir/build make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 11%] Generating API documentation with Doxygen cd /build/reproducible-path/cassiopee-1.0.9 && /usr/bin/doxygen /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile [ 22%] Building CXX object src/CMakeFiles/cassie.dir/cassiopee.cxx.o cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -Dcassie_EXPORTS -I/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -MD -MT src/CMakeFiles/cassie.dir/cassiopee.cxx.o -MF CMakeFiles/cassie.dir/cassiopee.cxx.o.d -o CMakeFiles/cassie.dir/cassiopee.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/src/cassiopee.cxx warning: Tag 'TCL_SUBST' at line 203 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SYMBOL_CACHE_SIZE' at line 327 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 547 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 839 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 935 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 941 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'USE_INLINE_TREES' at line 1132 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1159 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1297 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 1395 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 1401 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 1566 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 1578 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 1587 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 1617 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 1622 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 1762 of file '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:324: warning: Compound per_position is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:223: warning: Member seq_length (variable) of class CassieIndexer is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:353: warning: Member morphisms (variable) of class CassieSearch is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:424: warning: Member pattern_length (variable) of class CassieSearch is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:403: warning: argument 'array' of command @param is not found in the argument list of CassieSearch::search(string suffixes[]) /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:403: warning: The following parameter of CassieSearch::search(string suffixes[]) is not documented: parameter 'suffixes' /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:49: warning: Member pos (variable) of class Match is not documented. /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h:326: warning: Member operator()(const Match *struct1, const Match *struct2) (function) of struct per_position is not documented. Doxygen version used: 1.9.8 Notice: Output directory 'doc' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/cassiopee-1.0.9/src Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/cassie.cxx... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/cassie.cxx... Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/cassiopee.cxx... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/cassiopee.cxx... Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/Cassiopee.h... Preprocessing /build/reproducible-path/cassiopee-1.0.9/src/knife.cxx... Parsing file /build/reproducible-path/cassiopee-1.0.9/src/knife.cxx... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file src/Cassiopee.h... Generating file documentation... Generating page documentation... Generating group documentation... Generating class documentation... Generating docs for compound Ambiguous... Generating docs for compound CassieIndexer... Generating docs for compound CassieSearch... Generating docs for compound CassiopeeUtils... Generating docs for compound Match... Generating docs for compound per_position... Generating docs for compound TreeNode... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... type lookup cache used 145/65536 hits=236 misses=150 symbol lookup cache used 125/65536 hits=429 misses=125 finished... make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 22%] Built target doc [ 33%] Linking CXX shared library ../lib/libcassie.so cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/cassie.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libcassie.so.1 -o ../lib/libcassie.so.1.0.0 CMakeFiles/cassie.dir/cassiopee.cxx.o -L/usr/local/lib -Wl,-rpath,/usr/local/lib: -lglog /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so.1.83.0 cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_symlink_library ../lib/libcassie.so.1.0.0 ../lib/libcassie.so.1 ../lib/libcassie.so make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 33%] Built target cassie make -f src/CMakeFiles/cassiopee.dir/build.make src/CMakeFiles/cassiopee.dir/depend make -f src/CMakeFiles/cassiopeeknife.dir/build.make src/CMakeFiles/cassiopeeknife.dir/depend make -f test/CMakeFiles/test_cassiopee.dir/build.make test/CMakeFiles/test_cassiopee.dir/depend make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src/CMakeFiles/cassiopeeknife.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src/CMakeFiles/cassiopee.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cassiopee-1.0.9 /build/reproducible-path/cassiopee-1.0.9/test /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/test /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/test/CMakeFiles/test_cassiopee.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/cassiopeeknife.dir/build.make src/CMakeFiles/cassiopeeknife.dir/build make -f src/CMakeFiles/cassiopee.dir/build.make src/CMakeFiles/cassiopee.dir/build make -f test/CMakeFiles/test_cassiopee.dir/build.make test/CMakeFiles/test_cassiopee.dir/build make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[3]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 55%] Building CXX object src/CMakeFiles/cassiopee.dir/cassie.cxx.o [ 55%] Building CXX object test/CMakeFiles/test_cassiopee.dir/test.cxx.o [ 66%] Building CXX object src/CMakeFiles/cassiopeeknife.dir/knife.cxx.o cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin -I/build/reproducible-path/cassiopee-1.0.9/test/src -I/build/reproducible-path/cassiopee-1.0.9/src -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT test/CMakeFiles/test_cassiopee.dir/test.cxx.o -MF CMakeFiles/test_cassiopee.dir/test.cxx.o.d -o CMakeFiles/test_cassiopee.dir/test.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/test/test.cxx cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT src/CMakeFiles/cassiopee.dir/cassie.cxx.o -MF CMakeFiles/cassiopee.dir/cassie.cxx.o.d -o CMakeFiles/cassiopee.dir/cassie.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/src/cassie.cxx cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT src/CMakeFiles/cassiopeeknife.dir/knife.cxx.o -MF CMakeFiles/cassiopeeknife.dir/knife.cxx.o.d -o CMakeFiles/cassiopeeknife.dir/knife.cxx.o -c /build/reproducible-path/cassiopee-1.0.9/src/knife.cxx [ 77%] Linking CXX executable ../bin/cassiopeeknife cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/cassiopeeknife.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cassiopeeknife.dir/knife.cxx.o -o ../bin/cassiopeeknife -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/lib: ../lib/libcassie.so.1.0.0 -lglog /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 77%] Built target cassiopeeknife [ 88%] Linking CXX executable ../bin/cassiopee cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/cassiopee.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cassiopee.dir/cassie.cxx.o -o ../bin/cassiopee -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/lib: ../lib/libcassie.so.1.0.0 -lglog /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [ 88%] Built target cassiopee [100%] Linking CXX executable ../bin/test_cassiopee cd /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_cassiopee.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cassiopee-1.0.9=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_cassiopee.dir/test.cxx.o -o ../bin/test_cassiopee -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/lib ../lib/libcassie.so.1.0.0 -lglog -lcppunit /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so.1.83.0 make[3]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' [100%] Built target test_cassiopee make[2]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' dh_auto_test cd obj-arm-linux-gnueabihf && make -j3 test ARGS\+=--verbose ARGS\+=-j3 make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j3 UpdateCTestConfiguration from :/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/DartConfiguration.tcl Test project /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: TestCassie 1: Test command: /build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf/bin/test_cassiopee 1: Working Directory: /build/reproducible-path/cassiopee-1.0.9 1: Test timeout computed to be: 10000000 1: WARNING: Logging before InitGoogleLogging() is written to STDERR 1: I20240419 13:34:41.363075 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.363193 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.366163 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.366215 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.366489 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.366529 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.367089 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.367137 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.367431 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.367455 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.369246 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.369282 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.371150 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.371203 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.371699 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.371723 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.372262 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.372299 10786 cassiopee.cxx:651] Indexing test/protein.txt 1: I20240419 13:34:41.373100 10786 cassiopee.cxx:632] Existing index for max depth = 0 1: I20240419 13:34:41.373152 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.375705 10786 cassiopee.cxx:693] Maximum index depth: 75 1: I20240419 13:34:41.386114 10786 cassiopee.cxx:632] Existing index for max depth = 75 1: I20240419 13:34:41.386201 10786 cassiopee.cxx:638] Index file exists, loading it 1: I20240419 13:34:41.397903 10786 cassiopee.cxx:743] Loaded 2504 nodes 1: I20240419 13:34:41.399204 10786 cassiopee.cxx:632] Existing index for max depth = 75 1: I20240419 13:34:41.399262 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: I20240419 13:34:41.401456 10786 cassiopee.cxx:693] Maximum index depth: 75 1: I20240419 13:34:41.410349 10786 cassiopee.cxx:632] Existing index for max depth = 75 1: I20240419 13:34:41.410425 10786 cassiopee.cxx:638] Index file exists, loading it 1: I20240419 13:34:41.421586 10786 cassiopee.cxx:743] Loaded 2504 nodes 1: I20240419 13:34:41.422600 10786 cassiopee.cxx:632] Existing index for max depth = 75 1: I20240419 13:34:41.422650 10786 cassiopee.cxx:651] Indexing test/sequence.txt 1: OK (13) 1/1 Test #1: TestCassie ....................... Passed 0.07 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.07 sec make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/cassiopee-1.0.9/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/cassiopee-1.0.9 -B/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopee -- Set non-toolchain portion of runtime path of "/build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopee" to "" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopeeknife -- Set non-toolchain portion of runtime path of "/build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/bin/cassiopeeknife" to "" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/CassiopeeConfig.h -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so.1.0.0 -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so.1 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so.1.0.0" to "" -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/lib/libcassie.so -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/Cassiopee.h -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/tree/tree.hh -- Installing: /build/reproducible-path/cassiopee-1.0.9/debian/tmp/usr/include/tree/tree_util.hh make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9/obj-arm-linux-gnueabihf' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/cassiopee-1.0.9' rm -f doc/html/jquery.js dh_install make[1]: Leaving directory '/build/reproducible-path/cassiopee-1.0.9' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libcassie1v5/usr/lib/libcassie.so.1.0.0 found in none of the libraries dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libcassie-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'libcassie-doc' in '../libcassie-doc_1.0.9-4_all.deb'. dpkg-deb: building package 'cassiopee' in '../cassiopee_1.0.9-4_armhf.deb'. dpkg-deb: building package 'libcassie1v5-dbgsym' in '../libcassie1v5-dbgsym_1.0.9-4_armhf.deb'. dpkg-deb: building package 'cassiopee-dbgsym' in '../cassiopee-dbgsym_1.0.9-4_armhf.deb'. dpkg-deb: building package 'libcassie-dev' in '../libcassie-dev_1.0.9-4_armhf.deb'. dpkg-deb: building package 'libcassie1v5' in '../libcassie1v5_1.0.9-4_armhf.deb'. dpkg-genbuildinfo --build=binary -O../cassiopee_1.0.9-4_armhf.buildinfo dpkg-genchanges --build=binary -O../cassiopee_1.0.9-4_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3680 and its subdirectories I: Current time: Fri Apr 19 01:35:07 -12 2024 I: pbuilder-time-stamp: 1713533707 Fri Apr 19 13:35:20 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt32z-armhf-rb.debian.net. Fri Apr 19 13:35:20 UTC 2024 I: Preparing to do remote build '2' on virt32z-armhf-rb.debian.net. Fri Apr 19 13:36:57 UTC 2024 I: Deleting $TMPDIR on virt32z-armhf-rb.debian.net. Fri Apr 19 13:36:59 UTC 2024 I: cassiopee_1.0.9-4_armhf.changes: Format: 1.8 Date: Mon, 18 Dec 2023 12:23:03 +0100 Source: cassiopee Binary: cassiopee cassiopee-dbgsym libcassie-dev libcassie-doc libcassie1v5 libcassie1v5-dbgsym Architecture: armhf all Version: 1.0.9-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: cassiopee - index and search tool in genomic sequences libcassie-dev - library and headers for development libcassie-doc - documentation for cassiopee library libcassie1v5 - library implementating search algorithms Closes: 1043792 Changes: cassiopee (1.0.9-4) unstable; urgency=medium . * Team upload. * d/control: declare compliance to standards version 4.6.2. * d/control: mark libcassie-doc Multi-Arch foreign. * d/clean: new: cleanup doc and test artifacts. (Closes: #1043792) * d/rules: remove clean override: deferred to d/clean. Checksums-Sha1: 236d929bad910a7bb3b58a1c0343c945c05bf8c5 132788 cassiopee-dbgsym_1.0.9-4_armhf.deb f70e45d0017f6d4ba276a9f2b7891ef64e499b74 8039 cassiopee_1.0.9-4_armhf.buildinfo 97ad73793065c10b649d280eb8e46b75e6d19afc 15752 cassiopee_1.0.9-4_armhf.deb e0d5a93e2a2a5ea3af72b7d4c1fa87730a7d60b5 18784 libcassie-dev_1.0.9-4_armhf.deb 8f7597b06c9990522fa140e4f0b602f16a658def 51884 libcassie-doc_1.0.9-4_all.deb 3a53adfcac08d7827dcd1a518e1d83f92842c0f1 346012 libcassie1v5-dbgsym_1.0.9-4_armhf.deb 1779bc8576e79a1ab7e00b0fc7580c7f6c5261c7 36636 libcassie1v5_1.0.9-4_armhf.deb Checksums-Sha256: 9f16876cdf01a80e35b5ae491021c4ff80485d6fa8f39e004f4a965e42875aef 132788 cassiopee-dbgsym_1.0.9-4_armhf.deb cc09475f2d18566a09dab78eb4fa9e3441bcad1d3a24cf0bd26c4cca549b509e 8039 cassiopee_1.0.9-4_armhf.buildinfo 76d3d1b61eddb3bd7c9e5897adf80e304158feef8c8d031f121f5fdb46458a8e 15752 cassiopee_1.0.9-4_armhf.deb 6aa09f31738fb0202229e255f5c78998582bb3fa88ee482a917e492e7daf7323 18784 libcassie-dev_1.0.9-4_armhf.deb e8adaaab3d3accd53e8c8cc05a5407e58358830dedd931b0aafd5b606f8d7de0 51884 libcassie-doc_1.0.9-4_all.deb 192db4d80531a20fafdb0c42cfa5466048a5ae074c740f2b84b8b27a9a85c6bd 346012 libcassie1v5-dbgsym_1.0.9-4_armhf.deb f55ec7601106ea875aa57f41aabb1b5cbdc19e158108df4f47754f815e7c8a4e 36636 libcassie1v5_1.0.9-4_armhf.deb Files: eb549e6cb75cc47ce8914f7c7702bf91 132788 debug optional cassiopee-dbgsym_1.0.9-4_armhf.deb acdcb16fe6fbd70b04d23e1433aad0c5 8039 science optional cassiopee_1.0.9-4_armhf.buildinfo c99b9e44f6010613d3b742fcaac6c3af 15752 science optional cassiopee_1.0.9-4_armhf.deb dc5ced81c0e7fcb3509cf4f42805a986 18784 libdevel optional libcassie-dev_1.0.9-4_armhf.deb 6729ab2ed076225c46fa9337736f1cdd 51884 doc optional libcassie-doc_1.0.9-4_all.deb f10cd92bfd8481b8fa3ee0b9ea324c3e 346012 debug optional libcassie1v5-dbgsym_1.0.9-4_armhf.deb 882fde9e52d0b5a0722faf6db0d4e24e 36636 libs optional libcassie1v5_1.0.9-4_armhf.deb Fri Apr 19 13:37:00 UTC 2024 I: diffoscope 264 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_6-3464.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.ttAvIGRh/cassiopee_1.0.9-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.ttAvIGRh/cassiopee_1.0.9-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.ttAvIGRh/cassiopee_1.0.9-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.ttAvIGRh/b1/cassiopee_1.0.9-4_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.ttAvIGRh/b2/cassiopee_1.0.9-4_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.504s) 0.504s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.033s) 0.033s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 938ms CPU time consumed: 937ms Fri Apr 19 13:37:02 UTC 2024 I: diffoscope 264 found no differences in the changes files, and a .buildinfo file also exists. Fri Apr 19 13:37:02 UTC 2024 I: cassiopee from trixie built successfully and reproducibly on armhf. Fri Apr 19 13:37:03 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Apr 19 13:37:03 UTC 2024 I: Submitting 12K b1/cassiopee_1.0.9-4_armhf.buildinfo.asc Fri Apr 19 13:37:06 UTC 2024 I: Submitting 12K b2/cassiopee_1.0.9-4_armhf.buildinfo.asc Fri Apr 19 13:37:11 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Apr 19 13:37:11 UTC 2024 I: Done submitting .buildinfo files. Fri Apr 19 13:37:11 UTC 2024 I: Removing signed cassiopee_1.0.9-4_armhf.buildinfo.asc files: removed './b1/cassiopee_1.0.9-4_armhf.buildinfo.asc' removed './b2/cassiopee_1.0.9-4_armhf.buildinfo.asc'