Tue May 7 18:15:30 UTC 2024 I: starting to build aegean/trixie/armhf on jenkins on '2024-05-07 18:15' Tue May 7 18:15:30 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_6/5320/console.log Tue May 7 18:15:30 UTC 2024 I: Downloading source for trixie/aegean=0.16.0+dfsg-4 --2024-05-07 18:15:31-- http://deb.debian.org/debian/pool/main/a/aegean/aegean_0.16.0%2bdfsg-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2235 (2.2K) [text/prs.lines.tag] Saving to: ‘aegean_0.16.0+dfsg-4.dsc’ 0K .. 100% 305M=0s 2024-05-07 18:15:31 (305 MB/s) - ‘aegean_0.16.0+dfsg-4.dsc’ saved [2235/2235] Tue May 7 18:15:31 UTC 2024 I: aegean_0.16.0+dfsg-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: aegean Binary: aegean Architecture: amd64 arm64 armel armhf i386 mipsel powerpc ppc64el s390x hurd-i386 kfreebsd-amd64 kfreebsd-i386 ppc64 x32 Version: 0.16.0+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Sascha Steinbiss Homepage: https://standage.github.io/AEGeAn Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/aegean Vcs-Git: https://salsa.debian.org/med-team/aegean.git Testsuite: autopkgtest Testsuite-Triggers: python3 Build-Depends: debhelper-compat (= 13), libcairo2-dev, libgenometools0-dev, python3 Package-List: aegean deb science optional arch=amd64,arm64,armel,armhf,i386,mipsel,powerpc,ppc64el,s390x,hurd-i386,kfreebsd-amd64,kfreebsd-i386,ppc64,x32 Checksums-Sha1: 29ba01d6ae8ec73e90a3dcea4cc1496dbe332ad1 534860 aegean_0.16.0+dfsg.orig.tar.xz 00691a8e3c55341d06cb35f66476e5f4b0a23426 9628 aegean_0.16.0+dfsg-4.debian.tar.xz Checksums-Sha256: 8d60ba13c60d404d04746c2f1253a712392f8368806d93f01f8e6edb0ec9c039 534860 aegean_0.16.0+dfsg.orig.tar.xz 18eaae267e4af9c076ea1679286b71f8a242d7e2124d09eb2457acd07b8e1f93 9628 aegean_0.16.0+dfsg-4.debian.tar.xz Files: 8df4e46ed3a5e4a5e1a5d863e03ba3c9 534860 aegean_0.16.0+dfsg.orig.tar.xz e15b076adebc76512ba2fa37111644de 9628 aegean_0.16.0+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEWzS6WqtVB+kDQm6F6NN64vCfSHIFAmYK+dUACgkQ6NN64vCf SHL84Q/9EJ2IxMBQLppk130OADeeDNlfTrNi5u1BNGwvbm+qnrIABCd5wV5VdLss jegnAftFHvy+dmakYTZqM1DogE3c+XLrGn26Fnl6TZ2DL4OVI0UiLZXoT/6xOR8e z0elbB9qyithsrtOsMVh+cYdTedhRljSEZXYhN8TWV9gMcII2DXshWKIkmYm3Oyx F1i8c4HLb2Sa1XFwxfKqaf4CnGrVZgFLi3mBV/OAhFXPDqLtTZUadG94RYqDEsWL I3WsXRmFVtiK/1BOXZoAxsAbe5uFPKD6oU+8yQKcc/iRCN1OHihhrfsHurJbJdDX tmOhgCtysThLDr9qxvZUCakZT+nsfvTPNHMVdjTkUshD+KCc1mOxZ2wblRtCGtPB VrmSnoVIU/hRTp34mOD2ZLMLAVRb3cdG0rjV7sVf5bmgDPC6lSCqfyhjoldzayzK QV6xvoZAQTW36MPERsTEsPZ0RAhhgw9950fiYIc+8oENg0t6gf+iQLqlMFN7B4iz ryvmYHOfUGTDaO7sfbvgzG0TjGiDewjVPwvrKMFLsy/yaD7kirLb8h1aqUX7Tn4Z vsNM6msxlO9sfFmoepdNU0smaga7RToZ2PLpL8ZEGtjak7iCSJIjxJsdJxdTnt7X HbXYIkrXflW/vuH6ungp2BVcKV5pz+AjL827y2YxOykpcmDqXnw= =zDYg -----END PGP SIGNATURE----- Tue May 7 18:15:31 UTC 2024 I: Checking whether the package is not for us Tue May 7 18:15:31 UTC 2024 I: Starting 1st build on remote node virt64b-armhf-rb.debian.net. Tue May 7 18:15:31 UTC 2024 I: Preparing to do remote build '1' on virt64b-armhf-rb.debian.net. Tue May 7 18:20:00 UTC 2024 I: Deleting $TMPDIR on virt64b-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue May 7 06:15:38 -12 2024 I: pbuilder-time-stamp: 1715105738 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [aegean_0.16.0+dfsg-4.dsc] I: copying [./aegean_0.16.0+dfsg.orig.tar.xz] I: copying [./aegean_0.16.0+dfsg-4.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Apr 1 18:15:49 2024 gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./aegean_0.16.0+dfsg-4.dsc: no acceptable signature found dpkg-source: info: extracting aegean in aegean-0.16.0+dfsg dpkg-source: info: unpacking aegean_0.16.0+dfsg.orig.tar.xz dpkg-source: info: unpacking aegean_0.16.0+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying add_hardening dpkg-source: info: applying fix_m64_on_some_archs dpkg-source: info: applying remove_license dpkg-source: info: applying adjust_datapath dpkg-source: info: applying follow_links dpkg-source: info: applying includepaths dpkg-source: info: applying 2to3.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/6303/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='1b7727eebba642d5a9c538ccda718f6b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='6303' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qFuCo4Hg/pbuilderrc_AMsT --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qFuCo4Hg/b1 --logfile b1/build.log aegean_0.16.0+dfsg-4.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64b 6.1.0-21-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 5 11:24 /bin -> usr/bin I: user script /srv/workspace/pbuilder/6303/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libcairo2-dev, libgenometools0-dev, python3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19444 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libcairo2-dev; however: Package libcairo2-dev is not installed. pbuilder-satisfydepends-dummy depends on libgenometools0-dev; however: Package libgenometools0-dev is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} genometools-common{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblkid-dev{a} libbrotli-dev{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcairo-gobject2{a} libcairo-script-interpreter2{a} libcairo2{a} libcairo2-dev{a} libdatrie1{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libffi-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig-dev{a} libfontconfig1{a} libfreetype-dev{a} libfreetype6{a} libfribidi0{a} libgenometools0-dev{a} libgenometools0t64{a} libglib2.0-0t64{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libgraphite2-3{a} libharfbuzz0b{a} libice-dev{a} libice6{a} libicu72{a} liblua5.1-0{a} liblzo2-2{a} libmagic-mgc{a} libmagic1t64{a} libmount-dev{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpixman-1-dev{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libpthread-stubs0-dev{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8t64{a} libselinux1-dev{a} libsepol-dev{a} libsm-dev{a} libsm6{a} libsub-override-perl{a} libthai-data{a} libthai0{a} libtool{a} libtre5{a} libuchardet0{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shm0{a} libxcb-shm0-dev{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxml2{a} libxrender-dev{a} libxrender1{a} lua-md5{a} m4{a} man-db{a} media-types{a} netbase{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-minimal{a} python3-packaging{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} uuid-dev{a} x11-common{a} x11proto-core-dev{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl libpng-tools lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 127 newly installed, 0 to remove and 0 not upgraded. Need to get 46.6 MB of archives. After unpacking 155 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.11-minimal armhf 3.11.9-1 [805 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.11-minimal armhf 3.11.9-1 [1600 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024a-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-4 [145 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libpython3.11-stdlib armhf 3.11.9-1 [1704 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf python3.11 armhf 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-4 [1090 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40-8 [85.6 kB] Get: 22 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf autoconf all 2.71-3 [332 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf autopoint all 0.21-14 [496 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 36 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf debhelper all 13.15.3 [901 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b3 [284 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf libpng16-16t64 armhf 1.6.43-5 [262 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libfreetype6 armhf 2.13.2+dfsg-1+b4 [372 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf fontconfig-config armhf 2.15.0-1.1 [317 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libfontconfig1 armhf 2.15.0-1.1 [370 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf fontconfig armhf 2.15.0-1.1 [461 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf liblua5.1-0 armhf 5.1.5-9+b2 [87.4 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libpixman-1-0 armhf 0.42.2-1+b1 [476 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.9-1+b1 [17.4 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libbsd0 armhf 0.12.2-1 [127 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.2-3+b1 [23.0 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.15-1 [140 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.7-1 [328 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.7-1+b1 [739 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libxcb-render0 armhf 1.15-1 [114 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libxcb-shm0 armhf 1.15-1 [106 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b1 [47.8 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf libxrender1 armhf 1:0.9.10-1.1+b1 [24.9 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf libcairo2 armhf 1.18.0-3+b1 [442 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libfribidi0 armhf 1.0.13-3+b1 [69.4 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf libglib2.0-0t64 armhf 2.78.4-7 [1285 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf libgraphite2-3 armhf 1.3.14-2 [63.2 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libharfbuzz0b armhf 8.3.0-2+b1 [2156 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf libthai-data all 0.1.29-2 [168 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf libdatrie1 armhf 0.2.13-3 [34.4 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf libthai0 armhf 0.1.29-2 [45.8 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libpango-1.0-0 armhf 1.52.1+ds-1 [192 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf libpangoft2-1.0-0 armhf 1.52.1+ds-1 [41.8 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf libpangocairo-1.0-0 armhf 1.52.1+ds-1 [31.2 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf libtre5 armhf 0.8.0-7+b1 [52.3 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf genometools-common all 1.6.5+ds-2.2 [195 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf uuid-dev armhf 2.40-8 [42.5 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf libblkid-dev armhf 2.40-8 [190 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf libbrotli-dev armhf 1.1.0-2+b3 [292 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf libbz2-dev armhf 1.0.8-5.1 [28.3 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf libcairo-gobject2 armhf 1.18.0-3+b1 [129 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf liblzo2-2 armhf 2.10-2+b1 [48.0 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf libcairo-script-interpreter2 armhf 1.18.0-3+b1 [49.9 kB] Get: 84 http://deb.debian.org/debian trixie/main armhf libexpat1-dev armhf 2.6.2-1 [140 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg-3.1 [904 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf libpng-dev armhf 1.6.43-5 [344 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf libfreetype-dev armhf 2.13.2+dfsg-1+b4 [546 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf libpkgconf3 armhf 1.8.1-1+b2 [31.9 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf pkgconf-bin armhf 1.8.1-1+b2 [28.9 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf pkgconf armhf 1.8.1-1+b2 [26.2 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf libfontconfig-dev armhf 2.15.0-1.1 [395 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libffi-dev armhf 3.4.6-1 [55.9 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf libglib2.0-data all 2.78.4-7 [1225 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libglib2.0-bin armhf 2.78.4-7 [110 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf python3-packaging all 24.0-1 [45.5 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf libglib2.0-dev-bin armhf 2.78.4-7 [155 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf libsepol-dev armhf 3.5-2+b1 [320 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf libpcre2-16-0 armhf 10.42-4+b1 [212 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf libpcre2-32-0 armhf 10.42-4+b1 [203 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf libpcre2-posix3 armhf 10.42-4+b1 [55.3 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf libpcre2-dev armhf 10.42-4+b1 [668 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf libselinux1-dev armhf 3.5-2+b2 [152 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf libmount-dev armhf 2.40-8 [25.9 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf libglib2.0-dev armhf 2.78.4-7 [1529 kB] Get: 105 http://deb.debian.org/debian trixie/main armhf libpixman-1-dev armhf 0.42.2-1+b1 [498 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf x11-common all 1:7.7+23 [252 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf libice6 armhf 2:1.0.10-1+b1 [50.1 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf libsm6 armhf 2:1.2.3-1+b1 [31.7 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf x11proto-dev all 2024.1-1 [603 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf x11proto-core-dev all 2024.1-1 [3312 B] Get: 112 http://deb.debian.org/debian trixie/main armhf libice-dev armhf 2:1.0.10-1+b1 [60.1 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf libsm-dev armhf 2:1.2.3-1+b1 [34.9 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf libxau-dev armhf 1:1.0.9-1+b1 [20.8 kB] Get: 115 http://deb.debian.org/debian trixie/main armhf libxdmcp-dev armhf 1:1.1.2-3+b1 [39.3 kB] Get: 116 http://deb.debian.org/debian trixie/main armhf xtrans-dev all 1.4.0-1 [98.7 kB] Get: 117 http://deb.debian.org/debian trixie/main armhf libpthread-stubs0-dev armhf 0.4-1+b1 [5340 B] Get: 118 http://deb.debian.org/debian trixie/main armhf libxcb1-dev armhf 1.15-1 [179 kB] Get: 119 http://deb.debian.org/debian trixie/main armhf libx11-dev armhf 2:1.8.7-1+b1 [818 kB] Get: 120 http://deb.debian.org/debian trixie/main armhf libxcb-render0-dev armhf 1.15-1 [118 kB] Get: 121 http://deb.debian.org/debian trixie/main armhf libxcb-shm0-dev armhf 1.15-1 [107 kB] Get: 122 http://deb.debian.org/debian trixie/main armhf libxext-dev armhf 2:1.3.4-1+b1 [103 kB] Get: 123 http://deb.debian.org/debian trixie/main armhf libxrender-dev armhf 1:0.9.10-1.1+b1 [33.0 kB] Get: 124 http://deb.debian.org/debian trixie/main armhf libcairo2-dev armhf 1.18.0-3+b1 [43.2 kB] Get: 125 http://deb.debian.org/debian trixie/main armhf lua-md5 armhf 1.2+git+1+8d87fee-2+b1 [11.8 kB] Get: 126 http://deb.debian.org/debian trixie/main armhf libgenometools0t64 armhf 1.6.5+ds-2.2 [1266 kB] Get: 127 http://deb.debian.org/debian trixie/main armhf libgenometools0-dev armhf 1.6.5+ds-2.2 [95.2 kB] Fetched 46.6 MB in 6s (8012 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19444 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_armhf.deb ... Unpacking libpython3.11-minimal:armhf (3.11.9-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.2-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_armhf.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:armhf (3.11.9-1) ... Setting up libexpat1:armhf (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19760 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_armhf.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-3_all.deb ... Unpacking tzdata (2024a-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../5-libreadline8t64_8.2-4_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:armhf. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_armhf.deb ... Unpacking libpython3.11-stdlib:armhf (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_armhf.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20752 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_armhf.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../003-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../006-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../007-groff-base_1.23.0-4_armhf.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../008-bsdextrautils_2.40-8_armhf.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../009-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../010-man-db_2.12.1-1_armhf.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../011-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../012-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../013-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../014-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../015-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../016-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../017-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../018-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../019-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../020-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../021-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../022-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../023-libelf1t64_0.191-1+b1_armhf.deb ... Unpacking libelf1t64:armhf (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../024-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../025-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../026-libxml2_2.9.14+dfsg-1.3+b3_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../027-gettext_0.21-14+b1_armhf.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../028-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../029-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../030-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package libbrotli1:armhf. Preparing to unpack .../031-libbrotli1_1.1.0-2+b3_armhf.deb ... Unpacking libbrotli1:armhf (1.1.0-2+b3) ... Selecting previously unselected package libpng16-16t64:armhf. Preparing to unpack .../032-libpng16-16t64_1.6.43-5_armhf.deb ... Unpacking libpng16-16t64:armhf (1.6.43-5) ... Selecting previously unselected package libfreetype6:armhf. Preparing to unpack .../033-libfreetype6_2.13.2+dfsg-1+b4_armhf.deb ... Unpacking libfreetype6:armhf (2.13.2+dfsg-1+b4) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../034-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../035-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../036-fontconfig-config_2.15.0-1.1_armhf.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:armhf. Preparing to unpack .../037-libfontconfig1_2.15.0-1.1_armhf.deb ... Unpacking libfontconfig1:armhf (2.15.0-1.1) ... Selecting previously unselected package fontconfig. Preparing to unpack .../038-fontconfig_2.15.0-1.1_armhf.deb ... Unpacking fontconfig (2.15.0-1.1) ... Selecting previously unselected package liblua5.1-0:armhf. Preparing to unpack .../039-liblua5.1-0_5.1.5-9+b2_armhf.deb ... Unpacking liblua5.1-0:armhf (5.1.5-9+b2) ... Selecting previously unselected package libpixman-1-0:armhf. Preparing to unpack .../040-libpixman-1-0_0.42.2-1+b1_armhf.deb ... Unpacking libpixman-1-0:armhf (0.42.2-1+b1) ... Selecting previously unselected package libxau6:armhf. Preparing to unpack .../041-libxau6_1%3a1.0.9-1+b1_armhf.deb ... Unpacking libxau6:armhf (1:1.0.9-1+b1) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../042-libbsd0_0.12.2-1_armhf.deb ... Unpacking libbsd0:armhf (0.12.2-1) ... Selecting previously unselected package libxdmcp6:armhf. Preparing to unpack .../043-libxdmcp6_1%3a1.1.2-3+b1_armhf.deb ... Unpacking libxdmcp6:armhf (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:armhf. Preparing to unpack .../044-libxcb1_1.15-1_armhf.deb ... Unpacking libxcb1:armhf (1.15-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../045-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:armhf. Preparing to unpack .../046-libx11-6_2%3a1.8.7-1+b1_armhf.deb ... Unpacking libx11-6:armhf (2:1.8.7-1+b1) ... Selecting previously unselected package libxcb-render0:armhf. Preparing to unpack .../047-libxcb-render0_1.15-1_armhf.deb ... Unpacking libxcb-render0:armhf (1.15-1) ... Selecting previously unselected package libxcb-shm0:armhf. Preparing to unpack .../048-libxcb-shm0_1.15-1_armhf.deb ... Unpacking libxcb-shm0:armhf (1.15-1) ... Selecting previously unselected package libxext6:armhf. Preparing to unpack .../049-libxext6_2%3a1.3.4-1+b1_armhf.deb ... Unpacking libxext6:armhf (2:1.3.4-1+b1) ... Selecting previously unselected package libxrender1:armhf. Preparing to unpack .../050-libxrender1_1%3a0.9.10-1.1+b1_armhf.deb ... Unpacking libxrender1:armhf (1:0.9.10-1.1+b1) ... Selecting previously unselected package libcairo2:armhf. Preparing to unpack .../051-libcairo2_1.18.0-3+b1_armhf.deb ... Unpacking libcairo2:armhf (1.18.0-3+b1) ... Selecting previously unselected package libfribidi0:armhf. Preparing to unpack .../052-libfribidi0_1.0.13-3+b1_armhf.deb ... Unpacking libfribidi0:armhf (1.0.13-3+b1) ... Selecting previously unselected package libglib2.0-0t64:armhf. Preparing to unpack .../053-libglib2.0-0t64_2.78.4-7_armhf.deb ... Unpacking libglib2.0-0t64:armhf (2.78.4-7) ... Selecting previously unselected package libgraphite2-3:armhf. Preparing to unpack .../054-libgraphite2-3_1.3.14-2_armhf.deb ... Unpacking libgraphite2-3:armhf (1.3.14-2) ... Selecting previously unselected package libharfbuzz0b:armhf. Preparing to unpack .../055-libharfbuzz0b_8.3.0-2+b1_armhf.deb ... Unpacking libharfbuzz0b:armhf (8.3.0-2+b1) ... Selecting previously unselected package libthai-data. Preparing to unpack .../056-libthai-data_0.1.29-2_all.deb ... Unpacking libthai-data (0.1.29-2) ... Selecting previously unselected package libdatrie1:armhf. Preparing to unpack .../057-libdatrie1_0.2.13-3_armhf.deb ... Unpacking libdatrie1:armhf (0.2.13-3) ... Selecting previously unselected package libthai0:armhf. Preparing to unpack .../058-libthai0_0.1.29-2_armhf.deb ... Unpacking libthai0:armhf (0.1.29-2) ... Selecting previously unselected package libpango-1.0-0:armhf. Preparing to unpack .../059-libpango-1.0-0_1.52.1+ds-1_armhf.deb ... Unpacking libpango-1.0-0:armhf (1.52.1+ds-1) ... Selecting previously unselected package libpangoft2-1.0-0:armhf. Preparing to unpack .../060-libpangoft2-1.0-0_1.52.1+ds-1_armhf.deb ... Unpacking libpangoft2-1.0-0:armhf (1.52.1+ds-1) ... Selecting previously unselected package libpangocairo-1.0-0:armhf. Preparing to unpack .../061-libpangocairo-1.0-0_1.52.1+ds-1_armhf.deb ... Unpacking libpangocairo-1.0-0:armhf (1.52.1+ds-1) ... Selecting previously unselected package libtre5:armhf. Preparing to unpack .../062-libtre5_0.8.0-7+b1_armhf.deb ... Unpacking libtre5:armhf (0.8.0-7+b1) ... Selecting previously unselected package genometools-common. Preparing to unpack .../063-genometools-common_1.6.5+ds-2.2_all.deb ... Unpacking genometools-common (1.6.5+ds-2.2) ... Selecting previously unselected package uuid-dev:armhf. Preparing to unpack .../064-uuid-dev_2.40-8_armhf.deb ... Unpacking uuid-dev:armhf (2.40-8) ... Selecting previously unselected package libblkid-dev:armhf. Preparing to unpack .../065-libblkid-dev_2.40-8_armhf.deb ... Unpacking libblkid-dev:armhf (2.40-8) ... Selecting previously unselected package libbrotli-dev:armhf. 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Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.40-8) ... Setting up libdatrie1:armhf (0.2.13-3) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:armhf (1.1.0-2+b3) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up liblzo2-2:armhf (2.10-2+b1) ... Setting up file (1:5.45-3) ... Setting up libffi-dev:armhf (3.4.6-1) ... Setting up libpthread-stubs0-dev:armhf (0.4-1+b1) ... Setting up libpcre2-16-0:armhf (10.42-4+b1) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up tzdata (2024a-3) ... Current default time zone: 'Etc/UTC' Local time is now: Tue May 7 18:17:52 UTC 2024. Universal Time is now: Tue May 7 18:17:52 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:armhf (10.42-4+b1) ... Setting up libglib2.0-0t64:armhf (2.78.4-7) ... No schema files found: doing nothing. Setting up libglib2.0-data (2.78.4-7) ... Setting up libpkgconf3:armhf (1.8.1-1+b2) ... Setting up lua-md5:armhf (1.2+git+1+8d87fee-2+b1) ... Setting up libexpat1-dev:armhf (2.6.2-1) ... Setting up libx11-data (2:1.8.7-1) ... Setting up uuid-dev:armhf (2.40-8) ... Setting up libfribidi0:armhf (1.0.13-3+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:armhf (1.6.43-5) ... Setting up autopoint (0.21-14) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libsepol-dev:armhf (3.5-2+b1) ... Setting up pkgconf-bin (1.8.1-1+b2) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg-3.1) ... Setting up libpcre2-posix3:armhf (10.42-4+b1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up liblua5.1-0:armhf (5.1.5-9+b2) ... Setting up libsub-override-perl (0.10-1) ... Setting up libthai-data (0.1.29-2) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libbsd0:armhf (0.12.2-1) ... Setting up readline-common (8.2-4) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Setting up libbrotli-dev:armhf (1.1.0-2+b3) ... Setting up libbz2-dev:armhf (1.0.8-5.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libblkid-dev:armhf (2.40-8) ... Setting up libice6:armhf (2:1.0.10-1+b1) ... Setting up libxdmcp6:armhf (1:1.1.2-3+b1) ... Setting up libxcb1:armhf (1.15-1) ... Setting up gettext (0.21-14+b1) ... Setting up libxau-dev:armhf (1:1.0.9-1+b1) ... Setting up libpcre2-dev:armhf (10.42-4+b1) ... Setting up libice-dev:armhf (2:1.0.10-1+b1) ... Setting up libtool (2.4.7-7) ... Setting up libxcb-render0:armhf (1.15-1) ... Setting up libselinux1-dev:armhf (3.5-2+b2) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libpng-dev:armhf (1.6.43-5) ... Setting up libglib2.0-bin (2.78.4-7) ... Setting up libxcb-shm0:armhf (1.15-1) ... Setting up pkgconf:armhf (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libthai0:armhf (0.1.29-2) ... Setting up libxdmcp-dev:armhf (1:1.1.2-3+b1) ... Setting up libfreetype6:armhf (2.13.2+dfsg-1+b4) ... Setting up x11proto-core-dev (2024.1-1) ... Setting up libreadline8t64:armhf (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-4) ... Setting up libx11-6:armhf (2:1.8.7-1+b1) ... Setting up libharfbuzz0b:armhf (8.3.0-2+b1) ... Setting up libfontconfig1:armhf (2.15.0-1.1) ... Setting up libsm6:armhf (2:1.2.3-1+b1) ... Setting up libmount-dev:armhf (2.40-8) ... Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libxcb1-dev:armhf (1.15-1) ... Setting up libxrender1:armhf (1:0.9.10-1.1+b1) ... Setting up libsm-dev:armhf (2:1.2.3-1+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:armhf (3.11.9-1) ... Setting up libpango-1.0-0:armhf (1.52.1+ds-1) ... Setting up libx11-dev:armhf (2:1.8.7-1+b1) ... Setting up libxext6:armhf (2:1.3.4-1+b1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:armhf (1.18.0-3+b1) ... Setting up libfreetype-dev:armhf (2.13.2+dfsg-1+b4) ... Setting up libxcb-shm0-dev:armhf (1.15-1) ... Setting up libxcb-render0-dev:armhf (1.15-1) ... Setting up libxext-dev:armhf (2:1.3.4-1+b1) ... Setting up libcairo-gobject2:armhf (1.18.0-3+b1) ... Setting up libpangoft2-1.0-0:armhf (1.52.1+ds-1) ... Setting up libxrender-dev:armhf (1:0.9.10-1.1+b1) ... Setting up libpangocairo-1.0-0:armhf (1.52.1+ds-1) ... Setting up libpython3-stdlib:armhf (3.11.8-1) ... Setting up libcairo-script-interpreter2:armhf (1.18.0-3+b1) ... Setting up python3.11 (3.11.9-1) ... Setting up libfontconfig-dev:armhf (2.15.0-1.1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up python3-packaging (24.0-1) ... Setting up genometools-common (1.6.5+ds-2.2) ... Setting up libglib2.0-dev-bin (2.78.4-7) ... Setting up libglib2.0-dev:armhf (2.78.4-7) ... Setting up libgenometools0t64 (1.6.5+ds-2.2) ... Setting up libcairo2-dev:armhf (1.18.0-3+b1) ... Setting up libgenometools0-dev (1.6.5+ds-2.2) ... Processing triggers for libc-bin (2.38-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/aegean-0.16.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../aegean_0.16.0+dfsg-4_source.changes dpkg-buildpackage: info: source package aegean dpkg-buildpackage: info: source version 0.16.0+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sascha Steinbiss dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' dh_auto_clean make -j3 clean make[2]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' rm -rf bin/parseval bin/canon-gff3 bin/locuspocus bin/gaeval bin/xtractore bin/pmrna bin/tidygff3 bin/unittests libaegean.a obj/AgnAttributeFilterStream.o obj/AgnCliquePair.o obj/AgnCompareReportHTML.o obj/AgnCompareReportText.o obj/AgnComparison.o obj/AgnFilterStream.o obj/AgnGaevalVisitor.o obj/AgnGeneStream.o obj/AgnInferCDSVisitor.o obj/AgnInferExonsVisitor.o obj/AgnInferParentStream.o obj/AgnLocus.o obj/AgnLocusFilterStream.o obj/AgnLocusMapVisitor.o obj/AgnLocusRefineStream.o obj/AgnLocusStream.o obj/AgnMrnaRepVisitor.o obj/AgnPseudogeneFixVisitor.o obj/AgnRemoveChildrenVisitor.o obj/AgnTranscriptClique.o obj/AgnTypecheck.o obj/AgnUnitTest.o obj/AgnUtils.o inc/core/AgnVersion.h bin/*.dSYM make[2]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' rm -f /build/reproducible-path/aegean-0.16.0+dfsg/README make[1]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' dh_auto_build -- prefix=/build/reproducible-path/aegean-0.16.0+dfsg/debian/tmp 64bit=no errorcheck=no make -j3 "INSTALL=install --strip-program=true" prefix=/build/reproducible-path/aegean-0.16.0\+dfsg/debian/tmp 64bit=no errorcheck=no make[2]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' [print inc/core/AgnVersion.h] [compile AgnAttributeFilterStream] [compile AgnCliquePair] [compile AgnCompareReportHTML] [compile AgnCompareReportText] src/core/AgnCompareReportText.c: In function ‘compare_report_text_comp_class_summary’: src/core/AgnCompareReportText.c:287:3: warning: ‘__builtin___strncpy_chk’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 287 | strncpy(header + 4, label, strlen(label)); | ^ src/core/AgnCompareReportText.c:287:3: note: length computed here 287 | strncpy(header + 4, label, strlen(label)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [compile AgnComparison] src/core/AgnCompareReportText.c: In function ‘compare_report_text_summary_struc’: src/core/AgnCompareReportText.c:589:3: warning: ‘__builtin___strncpy_chk’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 589 | strncpy(buffer + 14, units, strlen(units)); | ^ src/core/AgnCompareReportText.c:589:3: note: length computed here 589 | strncpy(buffer + 14, units, strlen(units)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/core/AgnCompareReportText.c:599:3: warning: ‘__builtin___strncpy_chk’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 599 | strncpy(buffer + 15, units, strlen(units)); | ^ src/core/AgnCompareReportText.c:599:3: note: length computed here 599 | strncpy(buffer + 15, units, strlen(units)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [compile AgnFilterStream] [compile AgnGaevalVisitor] [compile AgnGeneStream] [compile AgnInferCDSVisitor] [compile AgnInferExonsVisitor] src/core/AgnInferExonsVisitor.c: In function ‘infer_exons_visitor_visit_gene_collapse_feature’: src/core/AgnInferExonsVisitor.c:325:34: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 325 | gt_logger_log(v->logger, "[AgnInferExonsVisitor::infer_exons_visitor" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 | "_visit_gene_collapse_feature] mRNA ID is too long (%lu " 327 | "characters), will be truncated\n", strlen(tid)); | ~~~~~~~~~~~ | | | size_t {aka unsigned int} src/core/AgnInferExonsVisitor.c:326:77: note: format string is defined here 326 | "_visit_gene_collapse_feature] mRNA ID is too long (%lu " | ~~^ | | | long unsigned int | %u [compile AgnInferParentStream] [compile AgnLocus] [compile AgnLocusFilterStream] [compile AgnLocusMapVisitor] [compile AgnLocusRefineStream] [compile AgnLocusStream] [compile AgnMrnaRepVisitor] [compile AgnPseudogeneFixVisitor] [compile AgnRemoveChildrenVisitor] [compile AgnTranscriptClique] [compile AgnTypecheck] [compile AgnUnitTest] [compile AgnUtils] [compile ParsEval] [compile CanonGFF3] [compile LocusPocus] [compile GAEVAL] [compile Xtractore] [compile bin/pmrna] [compile bin/tidygff3] [compile unit tests] [create libaegean] ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libaegean.a make[2]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' make[1]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' dh_auto_test -- useshared=yes 64bit=no testthreads=5 make -j3 test useshared=yes 64bit=no testthreads=5 make[2]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' AEGeAn Unit Tests AEGeAn::AgnAttributeFilterStream | SUCCESS | Pogonomyrmex barbatus (partial) | PASS AEGeAn::AgnPseudogeneFixVisitor | SUCCESS | Gene, no pseudo attribute | PASS | Gene, bogus pseudo attribute | PASS | Corrected pseudogene | PASS | Uncorrected pseudogene | PASS | iLocus with gene & pseudogene | PASS AEGeAn::AgnInferParentStream | SUCCESS | Test 1: basic | PASS | Test 2: 2 top-level | PASS | Test 3: 2 top-level, inferred parent | PASS | Test 4: multichild | PASS | Test 5: multichild, inferred parent | PASS AEGeAn::AgnMrnaRepVisitor | SUCCESS | TAIR10: test 1 | PASS AEGeAn::AgnRemoveChildrenVisitor | SUCCESS | Test 1: grape (Gaze) | PASS AEGeAn::AgnTranscriptClique | SUCCESS | simple check | PASS | two mRNAs | PASS | copy check | PASS AEGeAn::AgnCliquePair | SUCCESS | perfect match vs. self | PASS | CDS match | PASS | non-match | PASS AEGeAn::AgnLocus | SUCCESS | grape test 1 | PASS | grape test 2 | PASS | filter by CDS length | PASS | filter by exon number | PASS AEGeAn::AgnFilterStream | SUCCESS | mRNA | PASS | exon | PASS | CDS | PASS | intron | PASS | exon+intron | PASS | CDS+intron | PASS AEGeAn::AgnInferCDSVisitor | SUCCESS | grape test sans UTRs | PASS | grape test with UTRs, strand check | PASS | grape test 3 | PASS | grape test 4 | PASS AEGeAn::AgnInferExonsVisitor | SUCCESS | grape test sans UTRs | PASS | grape test with UTRs, strand check | PASS | grape test 3 | PASS | grape test 4 | PASS AEGeAn::AgnGeneStream | SUCCESS | 1 gene, 2 mRNAs | PASS | 1 gene, 2 mRNAs (one sans CDS) | PASS | mRNA only | PASS | mRNA boundaries | PASS AEGeAn::AgnLocusStream | SUCCESS | grape test (pairwise) | PASS | Pdom test (pairwise) | PASS | Amel test (Augustus) | PASS | Delta=200 | PASS AEGeAn::AgnLocusRefineStream | SUCCESS | Atta cephalotes (syndrome): coords | PASS | Atta cephalotes (syndrome): elen | PASS | Megachile rotundata CST: coords | PASS | Megachile rotundata CST: elen | PASS AEGeAn::AgnGaevalVisitor | SUCCESS | range intersect (1) | PASS | range intersect (2) | PASS | range intersect (3) | PASS | union (1) | PASS | union (2) | PASS | union (3) | PASS | intersect (1) | PASS | intersect (2) | PASS | intersect (3) | PASS | intersect (4) | PASS | intersect (5) | PASS | calculate coverage | PASS | introns confirmed (no gaps) | PASS | introns confirmed (gaps) | PASS | calculate integrity | PASS ===== Unit tests passed for all 15 classes! ===== AEGeAn Functional Tests GFF3 I/O: 'AT1G05320' | codons | PASS | sansexons | PASS | sansutrs | PASS | withprot | PASS GFF3 I/O: 'FBgn0035002' | codons | PASS | sansexons | PASS | sansutrs | PASS AEGeAn::LocusPocus | default | PASS | end skip | PASS | Apis mellifera plap | PASS | Apis mellifera plap (CDS) | PASS | Apis mellifera LSM | PASS | Megachile rotundata CST (intron) | PASS | iiLocus lengths (Amel OGS Group7.16) | PASS | Nasonia vitripennis (intron gene) | PASS | A. echinatior (intron gene + ncRNA) | PASS AEGeAn::Xtractore | major royal jelly | PASS AEGeAn::CanonGFF3 | A. mellifera gene multitrans | PASS AEGeAn::GAEVAL | sans CDS | PASS | Pdom | PASS AEGeAn::ParsEval | Amel Group7.16 (text) | PASS | Amel Group7.16 (delta=500) | PASS | Amel Group7.16 (HTML) | PASS AEGeAn::align-convert.py | GAEVAL example1 | PASS | GAEVAL example5 | PASS AEGeAn::pmrna | A. mellifera Shal | PASS | A. mellifera dock | PASS | A. mellifera pseudo | PASS AEGeAn::tidygff3 | A. dorsata exception | PASS make[2]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' make[1]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' dh_auto_install -- 64bit=no prefix=/build/reproducible-path/aegean-0.16.0+dfsg/debian/tmp make -j3 install DESTDIR=/build/reproducible-path/aegean-0.16.0\+dfsg/debian/aegean AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" 64bit=no prefix=/build/reproducible-path/aegean-0.16.0\+dfsg/debian/tmp make[2]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' cp bin/parseval bin/canon-gff3 bin/locuspocus bin/gaeval bin/xtractore bin/pmrna bin/tidygff3 /build/reproducible-path/aegean-0.16.0+dfsg/debian/tmp/bin/. cp libaegean.a /build/reproducible-path/aegean-0.16.0+dfsg/debian/tmp/lib/. cp inc/core/*.h /build/reproducible-path/aegean-0.16.0+dfsg/debian/tmp/include/aegean/. cp -r data/share/* /build/reproducible-path/aegean-0.16.0+dfsg/debian/tmp/share/aegean/. make[2]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' make[1]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' dh_install debian/rules override_dh_installdocs make[1]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' cp /build/reproducible-path/aegean-0.16.0+dfsg/README.md /build/reproducible-path/aegean-0.16.0+dfsg/README dh_installdocs make[1]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms debian/rules override_dh_missing make[1]: Entering directory '/build/reproducible-path/aegean-0.16.0+dfsg' dh_missing --list-missing dh_missing: warning: bin/canon-gff3 exists in debian/tmp but is not installed to anywhere (related file: "bin/canon-gff3") dh_missing: warning: bin/gaeval exists in debian/tmp but is not installed to anywhere (related file: "bin/gaeval") dh_missing: warning: bin/locuspocus exists in debian/tmp but is not installed to anywhere (related file: "bin/locuspocus") dh_missing: warning: bin/parseval exists in debian/tmp but is not installed to anywhere (related file: "bin/parseval") dh_missing: warning: bin/pmrna exists in debian/tmp but is not installed to anywhere (related file: "bin/pmrna") dh_missing: warning: bin/tidygff3 exists in debian/tmp but is not installed to anywhere (related file: "bin/tidygff3") dh_missing: warning: bin/xtractore exists in debian/tmp but is not installed to anywhere (related file: "bin/xtractore") dh_missing: warning: include/aegean/AgnAttributeFilterStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnCliquePair.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnCompareReportHTML.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnCompareReportText.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnComparison.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnFilterStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnGaevalVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnGeneStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnInferCDSVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnInferExonsVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnInferParentStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocus.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocusFilterStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocusMapVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocusRefineStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocusStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnMrnaRepVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnPseudogeneFixVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnRemoveChildrenVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnTranscriptClique.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnTypecheck.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnUnitTest.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnUtils.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnVersion.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/aegean.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: lib/libaegean.a exists in debian/tmp but is not installed to anywhere While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * bin/canon-gff3 with: * bin/canon-gff3 in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_install: aegean (8) * dh_installdocs: aegean (1) * dh_installman: aegean (7) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. make[1]: Leaving directory '/build/reproducible-path/aegean-0.16.0+dfsg' dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'aegean-dbgsym' in '../aegean-dbgsym_0.16.0+dfsg-4_armhf.deb'. dpkg-deb: building package 'aegean' in '../aegean_0.16.0+dfsg-4_armhf.deb'. dpkg-genbuildinfo --build=binary -O../aegean_0.16.0+dfsg-4_armhf.buildinfo dpkg-genchanges --build=binary -O../aegean_0.16.0+dfsg-4_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/6303 and its subdirectories I: Current time: Tue May 7 06:19:42 -12 2024 I: pbuilder-time-stamp: 1715105982 Tue May 7 18:20:03 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt32z-armhf-rb.debian.net. Tue May 7 18:20:03 UTC 2024 I: Preparing to do remote build '2' on virt32z-armhf-rb.debian.net. Tue May 7 18:21:50 UTC 2024 I: Deleting $TMPDIR on virt32z-armhf-rb.debian.net. Tue May 7 18:21:52 UTC 2024 I: aegean_0.16.0+dfsg-4_armhf.changes: Format: 1.8 Date: Mon, 01 Apr 2024 19:49:51 +0200 Source: aegean Binary: aegean aegean-dbgsym Architecture: armhf Version: 0.16.0+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Sascha Steinbiss Description: aegean - integrated genome analysis toolkit Closes: 1068178 Changes: aegean (0.16.0+dfsg-4) unstable; urgency=medium . * Remove explicit runtime dependency on libgenometools0. Closes: #1068178 * Add d/copyright information for debian/ directory. * Bump Standards-Version. * Add Rules-Requires-Root: no. * Update debhelper compat level to 13. * Only list files not installed. * Adjust renamed lintian tag overrides. * Bump watchfile version to 4. Checksums-Sha1: e82aebb14528969b073ce97ab08630fdd98813da 1254512 aegean-dbgsym_0.16.0+dfsg-4_armhf.deb 6dc54564230de0d659b7d219af8bd0af5c488422 8013 aegean_0.16.0+dfsg-4_armhf.buildinfo 3265fa3ca6f8881fbd2fc974246db6045569eb68 180948 aegean_0.16.0+dfsg-4_armhf.deb Checksums-Sha256: d510d214796a89554c78db475c2187c3592fd06b635accb1518f24bc3aa5df8e 1254512 aegean-dbgsym_0.16.0+dfsg-4_armhf.deb 895740cae48e0f51e08b9522cb95d6139ffa2e411c37600abb420a88398a1ee7 8013 aegean_0.16.0+dfsg-4_armhf.buildinfo 2fe973813db7ab9d49e6075919b2a4e0e239a6fd680a26035dedc7783f053e6e 180948 aegean_0.16.0+dfsg-4_armhf.deb Files: 0eac1b4726d9d94ae97dcec7b6d1a1c2 1254512 debug optional aegean-dbgsym_0.16.0+dfsg-4_armhf.deb 8647fc8baee9b0e2172d5f489d2a3445 8013 science optional aegean_0.16.0+dfsg-4_armhf.buildinfo c3ed2d087ba37be8cd0e780e7d49626b 180948 science optional aegean_0.16.0+dfsg-4_armhf.deb Tue May 7 18:21:54 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_6-5320.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.qFuCo4Hg/aegean_0.16.0+dfsg-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.qFuCo4Hg/aegean_0.16.0+dfsg-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.qFuCo4Hg/aegean_0.16.0+dfsg-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.qFuCo4Hg/b1/aegean_0.16.0+dfsg-4_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.qFuCo4Hg/b2/aegean_0.16.0+dfsg-4_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.379s) 0.379s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.030s) 0.030s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 702ms CPU time consumed: 700ms Tue May 7 18:21:55 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Tue May 7 18:21:55 UTC 2024 I: aegean from trixie built successfully and reproducibly on armhf. Tue May 7 18:21:56 UTC 2024 I: Submitting .buildinfo files to external archives: Tue May 7 18:21:56 UTC 2024 I: Submitting 12K b1/aegean_0.16.0+dfsg-4_armhf.buildinfo.asc Tue May 7 18:21:57 UTC 2024 I: Submitting 12K b2/aegean_0.16.0+dfsg-4_armhf.buildinfo.asc Tue May 7 18:21:58 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue May 7 18:21:58 UTC 2024 I: Done submitting .buildinfo files. Tue May 7 18:21:58 UTC 2024 I: Removing signed aegean_0.16.0+dfsg-4_armhf.buildinfo.asc files: removed './b1/aegean_0.16.0+dfsg-4_armhf.buildinfo.asc' removed './b2/aegean_0.16.0+dfsg-4_armhf.buildinfo.asc'